Moc11g13600 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g13600
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 10058697 .. 10062236 (-)
RNA-Seq ExpressionMoc11g13600
SyntenyMoc11g13600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATGGTGGTAGGGTGTCGGAGATCTCTCCATTGGATGCAAATAGTGTTGTTGCGGCTGACAATCAAAGTCAACATTGTTATGTATGGTTCATGGCTTCGTCATCAAGACGTTTTGAATGGTTACCATGCACAAAATTGGAGAGGGCTACCGTCTGTTATCTTTTAGGATGACTCTTTATCTTCATTGCATTCTAGTTTAGAGAACTTACATGGTTCCGGGGCAAGGATGACGAAGCAAAAGGTGGGCGACGATGGAGGTGCGGCAGCAATTTGTTCAAATATCGTTTTGGGATCTATGGAGGTCATCAGACTTAATTGTCTTGAGATCGGTTATCAACGTTATTTTAGGAATTTGCTTGATCCTTCCTTACCTATCATAGTGGAGGATAAGGCAACTTTGGATGCAATTATTTTCCTCCAAATTCTAAATAGGGGTGTCATAATTGTCAATATCCTTCAATTAATTGAAAAATCTCCCCCAAAATCATTAAATGAGACCGTGGATGTTGTGACTTTGGAGAAAAGTTTTGGTGGGCTAGAATTTGTTCATATTCCTTGTTCTTTGAATAGGCAATTTGTTTTATTGGCAAAGTGCAATGATCGTTTCTATGTCCTTTGGGATAATTGTTTCTTTTATGGCTTCTATTTGTGGTGCGTTGTCACCCCTCTTCTGTTTCCTAGCTCTGATATCACCAACGTCCCTACTACAATCCACATTCCTCTACAGTCAATTTCTTCCCCTATCATTCCCTCGTTGAACCTTTCCTCCATCATTTTAACTGACACGACATCCCTTCTAGTTCCTATCTCTTCCTTGCCGACTAATTTGCACCATCCACCACCTGTTCCTTCCATGTTGCCAACAGTCTCTAATACTCATTCGATGCAGACACGTTCCAAGTCTGGTATCTCTAAATGTAAGATGTGCTATTTATCTACTACTTCCAACCCGGATAGTGAACCCAGTTTGTTTACTGCAGTAGCCAAATTTGTTGAATGGCAAGAGGCCATGACTGATGAATTTTCTACCCTACAAAAACAAAGTACTTGGTCTCTAGTTTCTTTACCTCCTGAGAAGAATATCGTTGGTTGCAAATGTGTTTATCGCATCAAACGTCACCCTGATGGATCTGTTGCGCGCTATAAAGCACACTTAGTGGCCAAAGGCTTTCATCAGGAACATGGCATTGACTATGGCGAAATATTTAGCCCAGTTGTCAAGAAACCGACTGTCCGTCTTATTTTGACTCTTTCCAGTACCTTTAGCTGGCCTCTACGACAACTCGATGTAAAAAATACCTTCCTCCATGGCAATCTCACTGAAGAGGTCTATATGACTCAACCACAGAGCTTCATCGATCCAGCATTTCCTCATTATGTGTGCAAACTTCATAAGTCACTTTATGGCCTAAAACAGGCCCCTCGTGTCTGGTTTGAGTGCTTTACAGGGCACATTACTACTACATTTGATTTTACATCATCTTATGCTGATTCATCTTTGTTTGTTCGTTGTGTTGGTAGCTCTATCACCTATCTGCTGCTTTACGTGGATGACATCATTCTCACCGGTAATGATGCTGCTTTTGTCACCCACTTCATCTCCAAACTTCAAACCAGGTTTGACATGACTGACCTTGGTAGGCTCAAATACTTCCTTGGTCTCGAGATTGACTGCCCAGGCAATGACATTCTGGTTACACAGTCTAAGTATGCTCGTGACCTCCTAGTTCGTTTTACTTGGCTGATGCCAAACCATGTTTCACTCATGGTGCTCTCAATATTTCTTTTTCCGCTACACCTGTGTGCTCTATTATTGATGCCCAGTTGTATCGTGAGATGGCCGGTGCGCTTCAATACCCTACATTCTCTCGTCCAAACATTTGTTTTTGCGGTGAATAAAGTTTGCTAGCAGATGCACCATCCAACTAGCAGTGATCTTACTGCAGCCAAACACATTCTCCGATATGTCAAAGGTACCATTAATCAAGGCATTCGCTTCTCGCCAGCTCTCTTTCATTTCAGGCCTTCTCTGACTCAGTTTGGGCTGGTGATGTTTCTGACATCGCTCCACCACTGGATATGTCATATTTTTGGGGTCTAATCCTATCTCCTGGTCGGCTAAGAAACAATCTACTATTACTCGCTCTTCTACTAAAGCTGAATATCGTGCATTGGCTGCCACCGCTGCTGAGTTGTCATTGCTTCGCCAACTACGTAAGGATCTTCACATCTTTCTCTCTATCGTCCCAACACTTTAGTGTGACAACCAGTCCTCCATCTGCCTGGCATCAAATCCAGTCTTTCACGCCCGTACCAAACATGTTGAAATTGACTTTCACTTTGTTCATGAACGAGTGGCTCATAAGGATCTCAACCTTCAATACATTCCTACCGAACAACAACTTGCGGACTTATTCACAAAGGCTCACACCATAGATCGATTTCGGTATTTATCCTCCAAACTTTTGTCTCCTTCAAAGGTGTCATAAGTTTGCGAGGCATGTTAAGTGTATCTCAACAACTTCTTAACAACAACTTATCCCTCGTAACCTTTACCTGTATACCTAAGATCATGTAAAACAGTTGTATTTCGTGTACTCTTAAACCTTCTCAAATGGTACAATTTATTTTTAATGCAATGTTTCTTTGATATAAAAAAAAATGTTTTGGTTCAAGATATAACCTTAATCAGTTAACCATGCCCAGTTGACAGATGGTTGGACATTCAAACCTTGTTTACTTAGCTGAAATTGGAATGCGAATGAATTGAAATATTATTAAATTTTATTATTCTAATATTTAATAATAATGAAGTCTATTTTTAAAAATTTGTTGATATTAATTAATAATAACAAACTAAAATTTAAAATTTAAATATAAATTTATAATATTTTATAATAAAATCTCATCCACTCATAGAAATTGTAGAATTTTTTTTTGAAGAAAAATTACTAGTAGTATGAATGAAAAAAAATAATAAAAATATAAAACAAGTAAATAAAAAAAGTTACGAGACTTATTAATAGGTGAGAGAAAGGATAAAAGTTATAAAGTAAATATAATAAAATGTGAGAACTATGGAATAACATGTTGGTAAATATATGTTGTATATATAAACTGTGTAATATTGGCAAACAGATACAATGTAACTAGTTACAAACAATACATATACTAACAACTTGATGAACATCAAAACTTGATAAATATTGTTGGAGGCGAATCCTGGCCTGCCACGTGTCATGATAAAAAAGGTGAGTTGGTTAAACGCGCGGACGAAATGGAGAAAGCGGCTCCAAAATACTCAGGTCGGCAGTCAGGGTAGGACCTATAGTGCCGAGCTGAGCTGATACAGAGTCCGTAACAGTGTCCCTTCAGTACCCGACAACACGCCGCGAGAAAGGTGCAGGGAAGGTGTGGGGATCGTTGGCCATAGTTCGTCCAGAACGTTCCGATCTAAATCGTATCCAAGCTCAATCGATTTCAGGCTCAAACATCTGGCGTCGTCTGTGGGGATACGACACATCTAGAAGTTAG

mRNA sequence

ATGGCGGATGGTGGTAGGGTGTCGGAGATCTCTCCATTGGATGCAAATAGTGTTGTTGCGGCTGACAATCAAAGTCAACATTGTTATGTATGGTTCATGGCTTCGTCATCAAGACGTTTTGAATGTTTAGAGAACTTACATGGTTCCGGGGCAAGGATGACGAAGCAAAAGGTGGGCGACGATGGAGGTGCGGCAGCAATTTGTTCAAATATCGTTTTGGGATCTATGGAGGTCATCAGACTTAATTGTCTTGAGATCGGTTATCAACGTTATTTTAGGAATTTGCTTGATCCTTCCTTACCTATCATAGTGGAGGATAAGGCAACTTTGGATGCAATTATTTTCCTCCAAATTCTAAATAGGGGTGTCATAATTGTCAATATCCTTCAATTAATTGAAAAATCTCCCCCAAAATCATTAAATGAGACCGTGGATGTTGTGACTTTGGAGAAAAGTTTTGGTGGGCTAGAATTTGTTCATATTCCTTGTTCTTTGAATAGGCAATTTGTTTTATTGGCAAAGTGCAATGATCGTTTCTATGTCCTTTGGGATAATTGTTTCTTTTATGGCTTCTATTTGTGGTGCGTTGTCACCCCTCTTCTGTTTCCTAGCTCTGATATCACCAACGTCCCTACTACAATCCACATTCCTCTACAGTCAATTTCTTCCCCTATCATTCCCTCGTTGAACCTTTCCTCCATCATTTTAACTGACACGACATCCCTTCTAGTTCCTATCTCTTCCTTGCCGACTAATTTGCACCATCCACCACCTGTTCCTTCCATGTTGCCAACAGTCTCTAATACTCATTCGATGCAGACACGTTCCAAGTCTGGTATCTCTAAATTGTCCCTTCAGTACCCGACAACACGCCGCGAGAAAGGTGCAGGGAAGGTGTGGGGATCGTTGGCCATAGTTCGTCCAGAACGTTCCGATCTAAATCGTATCCAAGCTCAATCGATTTCAGGCTCAAACATCTGGCGTCGTCTGTGGGGATACGACACATCTAGAAGTTAG

Coding sequence (CDS)

ATGGCGGATGGTGGTAGGGTGTCGGAGATCTCTCCATTGGATGCAAATAGTGTTGTTGCGGCTGACAATCAAAGTCAACATTGTTATGTATGGTTCATGGCTTCGTCATCAAGACGTTTTGAATGTTTAGAGAACTTACATGGTTCCGGGGCAAGGATGACGAAGCAAAAGGTGGGCGACGATGGAGGTGCGGCAGCAATTTGTTCAAATATCGTTTTGGGATCTATGGAGGTCATCAGACTTAATTGTCTTGAGATCGGTTATCAACGTTATTTTAGGAATTTGCTTGATCCTTCCTTACCTATCATAGTGGAGGATAAGGCAACTTTGGATGCAATTATTTTCCTCCAAATTCTAAATAGGGGTGTCATAATTGTCAATATCCTTCAATTAATTGAAAAATCTCCCCCAAAATCATTAAATGAGACCGTGGATGTTGTGACTTTGGAGAAAAGTTTTGGTGGGCTAGAATTTGTTCATATTCCTTGTTCTTTGAATAGGCAATTTGTTTTATTGGCAAAGTGCAATGATCGTTTCTATGTCCTTTGGGATAATTGTTTCTTTTATGGCTTCTATTTGTGGTGCGTTGTCACCCCTCTTCTGTTTCCTAGCTCTGATATCACCAACGTCCCTACTACAATCCACATTCCTCTACAGTCAATTTCTTCCCCTATCATTCCCTCGTTGAACCTTTCCTCCATCATTTTAACTGACACGACATCCCTTCTAGTTCCTATCTCTTCCTTGCCGACTAATTTGCACCATCCACCACCTGTTCCTTCCATGTTGCCAACAGTCTCTAATACTCATTCGATGCAGACACGTTCCAAGTCTGGTATCTCTAAATTGTCCCTTCAGTACCCGACAACACGCCGCGAGAAAGGTGCAGGGAAGGTGTGGGGATCGTTGGCCATAGTTCGTCCAGAACGTTCCGATCTAAATCGTATCCAAGCTCAATCGATTTCAGGCTCAAACATCTGGCGTCGTCTGTGGGGATACGACACATCTAGAAGTTAG

Protein sequence

MADGGRVSEISPLDANSVVAADNQSQHCYVWFMASSSRRFECLENLHGSGARMTKQKVGDDGGAAAICSNIVLGSMEVIRLNCLEIGYQRYFRNLLDPSLPIIVEDKATLDAIIFLQILNRGVIIVNILQLIEKSPPKSLNETVDVVTLEKSFGGLEFVHIPCSLNRQFVLLAKCNDRFYVLWDNCFFYGFYLWCVVTPLLFPSSDITNVPTTIHIPLQSISSPIIPSLNLSSIILTDTTSLLVPISSLPTNLHHPPPVPSMLPTVSNTHSMQTRSKSGISKLSLQYPTTRREKGAGKVWGSLAIVRPERSDLNRIQAQSISGSNIWRRLWGYDTSRS
Homology
[Close]
BLAST of Moc11g13600 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-19
Identity = 62/115 (53.91%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 1   MADGGRVSEISPLDANSVVAADNQSQHCYVWFMASSSRRFECLENLHGSG-ARMTKQKVG 60
           MAD   +SEISPLDANS V  D    +  ++      R  + L++ H     RM +QKVG
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMY--GPWHRHHDVLKSYHAQNWTRMMEQKVG 60

Query: 61  DDGGAAAICSNIVLGSMEVIRLNCLEIGYQRYFRNLLDPSLPIIVEDKATLDAII 115
           DDGGAA I SN VLGS+EVI LNCLEI  Q  F NL +PSLP+ VEDK T D II
Sbjct: 61  DDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTII 113

[Close]
BLAST of Moc11g13600 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-19
Identity = 62/115 (53.91%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 1   MADGGRVSEISPLDANSVVAADNQSQHCYVWFMASSSRRFECLENLHGSG-ARMTKQKVG 60
           MAD   +SEISPLDANS V  D    +  ++      R  + L++ H     RM +QKVG
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMY--GPWHRHHDVLKSYHAQNWTRMMEQKVG 60

Query: 61  DDGGAAAICSNIVLGSMEVIRLNCLEIGYQRYFRNLLDPSLPIIVEDKATLDAII 115
           DDGGAA I SN VLGS+EVI LNCLEI  Q  F NL +PSLP+ VEDK T D II
Sbjct: 61  DDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTII 113

The following BLAST results are available for this feature:
BLAST of Moc11g13600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.13.1e-1953.91uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of Moc11g13600 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g13600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ21.5e-1953.91uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of Moc11g13600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g13600.1Moc11g13600.1mRNA