Moc11g13530 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g13530
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	MYB transcription factor
Location	chr11: 9993048 .. 9994493 (-)
RNA-Seq Expression	Moc11g13530
Synteny	Moc11g13530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCGCTGCTTCCACTCCCGGGGACGACGGGAAGTCGTCCCCACGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCAACGACTCGTTCAACAGTTTGGTGCCCGAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGCATGCTTATCATTTCTCATTTCATGTTTCTAATTTTTTCGGTTAAATAAAAAGAAAGAGAATTCCTTCTACGTATCGATTTGGATCTAATCTATTAGTTTTTTCCTTTTTTTACCTATTCCCTTTCTTTTTTTTTCTCTCTCTATTTCATAGGAGTTGTGCATATTTTTATATCTAGAATTTATATATACAACATATATTAATGTGAGGAGTGAGTTGGGTAATTGTTTCAAAAACAAAATCTTCAAATTTATTAGTTTATACTTATTTATTTTTCGAGATTTATCATGTATTAAATTAGTTAGAAAGCATGAAATAATAATTTTTTCGATTTCTAATTTGTATAATTGACTGTTTCTAAAATTTGTATATAATTTTGAGAACGAAAAGAATGAAGACATAAATAATTATCACAAGAAACGTTTTCAAATAATCAGAAAGTTGCTTGGGGATAGAGAACTAGCAAGAATATGAAACCTTGCATAATATTTTGTGTTCTAGTCTTGTAGTTGTTTAGTTCTCTGATGAATTACAGTTATAGGATCCACTGACGTAAGCCACACGAGATCGATTTTGAATGATAAGAAATCTGAGATGTTTTCTATTAATATTCATAGCTTCCATTTGAGTAGCTCATATTTATTATAAATCGTTAATCCCTTATTTCTAATGCTACTCTAATGCGGGATCCTTAACATGCATCGATTGTGATTCTTTTAGCTCATTAATCTTAGCTGCATCTCATTTTCATACAGAAGGTTCGTTTGAACATTTTGGATAGGTTAATATTCATAGTAATTTATATTTATTAATTATAAACCGTTATTAGATTCCTTATCTTTTAAATGCATAACCTTAACGGTTTGGTTTCGTGTTTCGTGTTTTAATTTGCAGGGAAGAGTTGCAGATTGAGATGGTTCAATCAACTAGATCCAAGAATAAACCGAAGGCCGTTCAGTGAAGAAGAAGAAGAGAGATTAATGGCGGCGCATCGGATCCACGGCAACAAATGGGCCTTAATCGCCAGGCTTTTGCCCGGAAGAACCGATAACGCCGTCAAAAATCACTGGCACGTAATAATCGCCAGAAAGCACAGGCAACACTTCAAAATACACGGCGGCGGACGGTTTCCGTACGGACCAACAACTGCGGGCGTTTTCTTCAGACAGAAATCGGCGATCATTTTGAACGCGGACATCAAACGAGACGAGGAATCGGCTGACCCGAAGGATATTGTTCCGTTCATAGATTTTCTTGGCGTTGGGATCTCTTCTTCAACACCCAACAAATAA

mRNA sequence

ATGGACGCCGCTGCTTCCACTCCCGGGGACGACGGGAAGTCGTCCCCACGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCAACGACTCGTTCAACAGTTTGGTGCCCGAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGGAAGAGTTGCAGATTGAGATGGTTCAATCAACTAGATCCAAGAATAAACCGAAGGCCGTTCAGTGAAGAAGAAGAAGAGAGATTAATGGCGGCGCATCGGATCCACGGCAACAAATGGGCCTTAATCGCCAGGCTTTTGCCCGGAAGAACCGATAACGCCGTCAAAAATCACTGGCACGTAATAATCGCCAGAAAGCACAGGCAACACTTCAAAATACACGGCGGCGGACGGTTTCCGTACGGACCAACAACTGCGGGCGTTTTCTTCAGACAGAAATCGGCGATCATTTTGAACGCGGACATCAAACGAGACGAGGAATCGGCTGACCCGAAGGATATTGTTCCGTTCATAGATTTTCTTGGCGTTGGGATCTCTTCTTCAACACCCAACAAATAA

Coding sequence (CDS)

ATGGACGCCGCTGCTTCCACTCCCGGGGACGACGGGAAGTCGTCCCCACGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCAACGACTCGTTCAACAGTTTGGTGCCCGAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGGAAGAGTTGCAGATTGAGATGGTTCAATCAACTAGATCCAAGAATAAACCGAAGGCCGTTCAGTGAAGAAGAAGAAGAGAGATTAATGGCGGCGCATCGGATCCACGGCAACAAATGGGCCTTAATCGCCAGGCTTTTGCCCGGAAGAACCGATAACGCCGTCAAAAATCACTGGCACGTAATAATCGCCAGAAAGCACAGGCAACACTTCAAAATACACGGCGGCGGACGGTTTCCGTACGGACCAACAACTGCGGGCGTTTTCTTCAGACAGAAATCGGCGATCATTTTGAACGCGGACATCAAACGAGACGAGGAATCGGCTGACCCGAAGGATATTGTTCCGTTCATAGATTTTCTTGGCGTTGGGATCTCTTCTTCAACACCCAACAAATAA

Protein sequence

MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK

Homology

[Close]

BLAST of Moc11g13530 vs. NCBI nr
Match: XP_022153715.1 (transcription factor MYB52-like [Momordica charantia])

HSP 1 Score: 382.9 bits (982), Expect = 1.6e-102
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF 60
           MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF
Sbjct: 1   MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF 60

Query: 61  NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 120
           NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ
Sbjct: 61  NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 120

Query: 121 HFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSST 180
           HFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSST
Sbjct: 121 HFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSST 180

Query: 181 PNK 184
           PNK
Sbjct: 181 PNK 183

[Close]

BLAST of Moc11g13530 vs. NCBI nr
Match: XP_010260471.1 (PREDICTED: myb-related protein 3R-1-like [Nelumbo nucifera] >DAD22675.1 TPA_asm: hypothetical protein HUJ06_024138 [Nelumbo nucifera])

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 102/126 (80.95%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF 60
           M+ + S   DDGK+ PRGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSGKSCRLRWF
Sbjct: 1   MEDSVSGGSDDGKNCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWF 60

Query: 61  NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 120
           NQLDPRINRRPFSEEEEERL+AAHR+HGNKWALIARL PGRTDNAVKNHWHV++ARKHR+
Sbjct: 61  NQLDPRINRRPFSEEEEERLLAAHRVHGNKWALIARLFPGRTDNAVKNHWHVVMARKHRE 120

Query: 121 HFKIHG 127
             K+HG
Sbjct: 121 RSKLHG 126

[Close]

BLAST of Moc11g13530 vs. NCBI nr
Match: XP_010270380.1 (PREDICTED: transcription factor MYB23 [Nelumbo nucifera] >DAD39889.1 TPA_asm: hypothetical protein HUJ06_014212 [Nelumbo nucifera])

HSP 1 Score: 224.9 bits (572), Expect = 5.5e-55
Identity = 102/126 (80.95%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF 60
           M+ + S   DDGK+ PRGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSGKSCRLRWF
Sbjct: 1   MEDSGSGASDDGKTCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWF 60

Query: 61  NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 120
           NQLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PGRTDNAVKNHWHVI+ARKHR+
Sbjct: 61  NQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKHRE 120

Query: 121 HFKIHG 127
             K++G
Sbjct: 121 RSKLYG 126

[Close]

BLAST of Moc11g13530 vs. NCBI nr
Match: TXG53086.1 (hypothetical protein EZV62_022255 [Acer yangbiense])

HSP 1 Score: 223.4 bits (568), Expect = 1.6e-54
Identity = 106/136 (77.94%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 2   DAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFN 61
           D+ A++  D  KS PRGHWRPAEDEKL++LV+Q+GA+NWNSIAEKLQGRSGKSCRLRWFN
Sbjct: 27  DSGAASSDDATKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFN 86

Query: 62  QLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQH 121
           QLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PGRTDNAVKNHWHVI+ARK R+ 
Sbjct: 87  QLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQ 146

Query: 122 FKIHGGGRFPYGPTTA 138
            KI  GG+  Y  TT+
Sbjct: 147 SKI--GGKRSYQDTTS 160

[Close]

BLAST of Moc11g13530 vs. NCBI nr
Match: TKY74179.1 (Transcription factor MYB44 [Spatholobus suberectus])

HSP 1 Score: 222.2 bits (565), Expect = 3.6e-54
Identity = 104/142 (73.24%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 6   STPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDP 65
           S+ G+D K+ PRGHWRPAEDEKL++LV+Q+GA+NWNSIAEKLQGRSGKSCRLRWFNQLDP
Sbjct: 4   SSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP 63

Query: 66  RINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIH 125
           RINRRPF+EEEEERL+AAHRIHGNKWALIARL PGRTDNAVKNHWHVI+ARK R+  K+ 
Sbjct: 64  RINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLC 123

Query: 126 GGGRFP--YGPTTAGVFFRQKS 146
           G   F   Y  +T   F  +++
Sbjct: 124 GKRSFQDVYNDSTTSSFLEKRT 145

[Close]

BLAST of Moc11g13530 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.0e-49
Identity = 96/157 (61.15%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEE 76
           RGHWRPAEDEKL+ LV+Q+G  NWN+IA KL GRSGKSCRLRWFNQLDPRINR PF+EEE
Sbjct: 6   RGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTEEE 65

Query: 77  EERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTT 136
           EERL+AAHRIHGN+W++IARL PGRTDNAVKNHWHVI+AR+ RQ  K     R     T+
Sbjct: 66  EERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSK----PRLLPSTTS 125

Query: 137 AGVFFRQKSAIILNADIKRDEESADPKDIVP--FIDF 172
           +      +  ++ +     +  S D K I P  FI+F
Sbjct: 126 SSSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINF 158

[Close]

BLAST of Moc11g13530 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-48
Identity = 89/112 (79.46%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 9   GDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRIN 68
           G  GK   RGHWRPAED KL+ LV Q+G +NWN IAEKL GRSGKSCRLRWFNQLDPRIN
Sbjct: 41  GVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRIN 100

Query: 69  RRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 121
           RR F+EEEEERLMAAHR +GNKWALIARL PGRTDNAVKNHWHV++AR+HR+
Sbjct: 101 RRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHRE 152

[Close]

BLAST of Moc11g13530 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-48
Identity = 85/112 (75.89%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEE 76
           RGHWRPAEDEKL+ LV+QFG  NWN+IA+KL GRSGKSCRLRWFNQLDPRINR PF+EEE
Sbjct: 5   RGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTEEE 64

Query: 77  EERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGG 129
           EERL+A+HRIHGN+W++IAR  PGRTDNAVKNHWHVI+AR+ R+  K+   G
Sbjct: 65  EERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRG 116

[Close]

BLAST of Moc11g13530 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.6e-47
Identity = 84/105 (80.00%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEE 76
           RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRINRR F+EEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 77  EERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQH 122
           EERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++ARK+R+H
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREH 202

[Close]

BLAST of Moc11g13530 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-46
Identity = 87/113 (76.99%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 9   GDDGKSS-PRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRI 68
           G   K+S  RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRI
Sbjct: 98  GHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRI 157

Query: 69  NRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 121
           NRR F+EEEEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHVI+ARK R+
Sbjct: 158 NRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFRE 210

[Close]

BLAST of Moc11g13530 vs. ExPASy TrEMBL
Match: A0A6J1DHL3 (transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111021169 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 7.6e-103
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF 60
           MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF
Sbjct: 1   MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF 60

Query: 61  NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 120
           NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ
Sbjct: 61  NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 120

Query: 121 HFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSST 180
           HFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSST
Sbjct: 121 HFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSST 180

Query: 181 PNK 184
           PNK
Sbjct: 181 PNK 183

[Close]

BLAST of Moc11g13530 vs. ExPASy TrEMBL
Match: A0A1U8A2L0 (myb-related protein 3R-1-like OS=Nelumbo nucifera OX=4432 GN=LOC104599571 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.4e-56
Identity = 102/126 (80.95%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF 60
           M+ + S   DDGK+ PRGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSGKSCRLRWF
Sbjct: 1   MEDSVSGGSDDGKNCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWF 60

Query: 61  NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 120
           NQLDPRINRRPFSEEEEERL+AAHR+HGNKWALIARL PGRTDNAVKNHWHV++ARKHR+
Sbjct: 61  NQLDPRINRRPFSEEEEERLLAAHRVHGNKWALIARLFPGRTDNAVKNHWHVVMARKHRE 120

Query: 121 HFKIHG 127
             K+HG
Sbjct: 121 RSKLHG 126

[Close]

BLAST of Moc11g13530 vs. ExPASy TrEMBL
Match: A0A1U8AR74 (transcription factor MYB23 OS=Nelumbo nucifera OX=4432 GN=LOC104606735 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.7e-55
Identity = 102/126 (80.95%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MDAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWF 60
           M+ + S   DDGK+ PRGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSGKSCRLRWF
Sbjct: 1   MEDSGSGASDDGKTCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWF 60

Query: 61  NQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 120
           NQLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PGRTDNAVKNHWHVI+ARKHR+
Sbjct: 61  NQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKHRE 120

Query: 121 HFKIHG 127
             K++G
Sbjct: 121 RSKLYG 126

[Close]

BLAST of Moc11g13530 vs. ExPASy TrEMBL
Match: A0A5C7HA55 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022255 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 7.7e-55
Identity = 106/136 (77.94%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 2   DAAASTPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFN 61
           D+ A++  D  KS PRGHWRPAEDEKL++LV+Q+GA+NWNSIAEKLQGRSGKSCRLRWFN
Sbjct: 27  DSGAASSDDATKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFN 86

Query: 62  QLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQH 121
           QLDPRINRRPF+EEEEERL+AAHRIHGNKWALIARL PGRTDNAVKNHWHVI+ARK R+ 
Sbjct: 87  QLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQ 146

Query: 122 FKIHGGGRFPYGPTTA 138
            KI  GG+  Y  TT+
Sbjct: 147 SKI--GGKRSYQDTTS 160

[Close]

BLAST of Moc11g13530 vs. ExPASy TrEMBL
Match: A0A371FX08 (Transcription factor MYB52 OS=Mucuna pruriens OX=157652 GN=MYB52 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.8e-54
Identity = 103/142 (72.54%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 6   STPGDDGKSSPRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDP 65
           S+ G+D K+ PRGHWRPAEDEKL++LV+Q+GA+NWNSIAEKLQGRSGKSCRLRWFNQLDP
Sbjct: 4   SSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP 63

Query: 66  RINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIH 125
           RINRRPF+EEEEERL+AAHRIHGNKWALIARL PGRTDNAVKNHWHVI+ARK R+  K+ 
Sbjct: 64  RINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLS 123

Query: 126 GGGRF--PYGPTTAGVFFRQKS 146
           G   F   Y  +    F  +++
Sbjct: 124 GKRSFQDAYNDSNTSSFLEKRT 145

[Close]

BLAST of Moc11g13530 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 194.9 bits (494), Expect = 5.7e-50
Identity = 96/157 (61.15%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEE 76
           RGHWRPAEDEKL+ LV+Q+G  NWN+IA KL GRSGKSCRLRWFNQLDPRINR PF+EEE
Sbjct: 6   RGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTEEE 65

Query: 77  EERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTT 136
           EERL+AAHRIHGN+W++IARL PGRTDNAVKNHWHVI+AR+ RQ  K     R     T+
Sbjct: 66  EERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSK----PRLLPSTTS 125

Query: 137 AGVFFRQKSAIILNADIKRDEESADPKDIVP--FIDF 172
           +      +  ++ +     +  S D K I P  FI+F
Sbjct: 126 SSSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINF 158

[Close]

BLAST of Moc11g13530 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-49
Identity = 85/112 (75.89%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEE 76
           RGHWRPAEDEKL+ LV+QFG  NWN+IA+KL GRSGKSCRLRWFNQLDPRINR PF+EEE
Sbjct: 5   RGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTEEE 64

Query: 77  EERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGG 129
           EERL+A+HRIHGN+W++IAR  PGRTDNAVKNHWHVI+AR+ R+  K+   G
Sbjct: 65  EERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRG 116

[Close]

BLAST of Moc11g13530 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48
Identity = 84/105 (80.00%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEE 76
           RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRINRR F+EEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 77  EERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQH 122
           EERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++ARK+R+H
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREH 202

[Close]

BLAST of Moc11g13530 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48
Identity = 84/105 (80.00%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSEEE 76
           RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRINRR F+EEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 77  EERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQH 122
           EERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++ARK+R+H
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREH 202

[Close]

BLAST of Moc11g13530 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 186.0 bits (471), Expect = 2.6e-47
Identity = 87/113 (76.99%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 9   GDDGKSS-PRGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGKSCRLRWFNQLDPRI 68
           G   K+S  RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSGKSCRLRWFNQLDPRI
Sbjct: 98  GHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRI 157

Query: 69  NRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 121
           NRR F+EEEEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHVI+ARK R+
Sbjct: 158 NRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFRE 210

The following BLAST results are available for this feature:

BLAST of Moc11g13530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153715.1	1.6e-102	100.00	transcription factor MYB52-like [Momordica charantia]	[more]
XP_010260471.1	1.1e-55	80.95	PREDICTED: myb-related protein 3R-1-like [Nelumbo nucifera] >DAD22675.1 TPA_asm:...	[more]
XP_010270380.1	5.5e-55	80.95	PREDICTED: transcription factor MYB23 [Nelumbo nucifera] >DAD39889.1 TPA_asm: hy...	[more]
TXG53086.1	1.6e-54	77.94	hypothetical protein EZV62_022255 [Acer yangbiense]	[more]
TKY74179.1	3.6e-54	73.24	Transcription factor MYB44 [Spatholobus suberectus]	[more]

BLAST of Moc11g13530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FX36	8.0e-49	61.15	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q5NBM8	2.3e-48	79.46	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q6R0C4	3.0e-48	75.89	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q9LQX5	2.6e-47	80.00	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]
Q9SEZ4	3.7e-46	76.99	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]

BLAST of Moc11g13530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHL3	7.6e-103	100.00	transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111021169 P...	[more]
A0A1U8A2L0	5.4e-56	80.95	myb-related protein 3R-1-like OS=Nelumbo nucifera OX=4432 GN=LOC104599571 PE=4 S...	[more]
A0A1U8AR74	2.7e-55	80.95	transcription factor MYB23 OS=Nelumbo nucifera OX=4432 GN=LOC104606735 PE=4 SV=1	[more]
A0A5C7HA55	7.7e-55	77.94	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022255 PE=4 SV=1	[more]
A0A371FX08	3.8e-54	72.54	Transcription factor MYB52 OS=Mucuna pruriens OX=157652 GN=MYB52 PE=4 SV=1	[more]

BLAST of Moc11g13530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73410.1	5.7e-50	61.15	myb domain protein 54	[more]
AT1G17950.1	2.2e-49	75.89	myb domain protein 52	[more]
AT1G26780.1	1.8e-48	80.00	myb domain protein 117	[more]
AT1G26780.2	1.8e-48	80.00	myb domain protein 117	[more]
AT1G69560.1	2.6e-47	76.99	myb domain protein 105	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 68..116 e-value: 4.2E-15 score: 66.2 coord: 16..65 e-value: 5.6E-14 score: 62.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 64..114 score: 9.860335
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 12..63 score: 11.160925
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 20..61 e-value: 7.4646E-14 score: 60.667
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 71..111 e-value: 1.83139E-12 score: 57.2002
None	No IPR available	GENE3D	1.10.10.60		coord: 17..68 e-value: 1.8E-23 score: 84.2
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 20..80 e-value: 8.3E-17 score: 61.2
None	No IPR available	GENE3D	1.10.10.60		coord: 70..125 e-value: 2.1E-18 score: 68.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR45614:SF176	OS08G0435700 PROTEIN	coord: 12..129
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 12..129
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 12..63 score: 17.647783
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 64..118 score: 27.612503
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g13530.1	Moc11g13530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding