Moc11g10260 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g10260
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Squamosa promoter-binding protein
Location	chr11: 7382928 .. 7383622 (-)
RNA-Seq Expression	Moc11g10260
Synteny	Moc11g10260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACGAAGAGCTTCGAAGGCAGGCAGAGTTTTAAAGATAAGGTGTATAGGGAAGGCGTGGTCGATGATGATGTAGATTACGAGACGGAGGAGGAAGAGGTTGCCGGAGGAGGTCCTCATGGTTGTGCTGCATTGGGTTGTTCTGAGATTGAGAAAAAGAAAAGAGCTGCAGCAGTTCCAGGCCGTGGAAGGTCCGGTGGCGGCGTCTCTTCGCCAAGTTGCCAAGCACACAACTGTGCAACAGATTTGACTGAAGCAAAGAGGTATCACCGCCGCCACAAGGTCTGCGAGTTTCACTCCAAGGCGGCGGTCGTCATGGTGGCCGGAATTCGCCAGCGTTTCTGTCAGCAATGCAGCAGGTATTTGATCCTCTTTTAACAATATAAGCAACAACACTTCTGTTAACATTCTTCCCCCTCTTCTGTTCGTCTATGGTAATATGTTTGTTGTTGGTGGTGATCAGGTTCCACGAGTTATCAGAATTTGATGAAGCTAAAAGGAGCTGTCGCAGGAGGCTGGCGGGGCACAACGAGCGTCGGCGGAAGAGCTCGGCCGAGGAAGGCACAGGGCGCAAAGGACCTGCCCCACAGTCGAAGGAAAGCCATTGCAGGCAGCTGGTGGAAGATCAAAGAGGCAGAATTCAGATGGCTCCTCCAGGGAGTTCTGGCTATAAACACCTGCATATCAGATGA

mRNA sequence

ATGGAGACGAAGAGCTTCGAAGGCAGGCAGAGTTTTAAAGATAAGGTGTATAGGGAAGGCGTGGTCGATGATGATGTAGATTACGAGACGGAGGAGGAAGAGGTTGCCGGAGGAGGTCCTCATGGTTGTGCTGCATTGGGTTGTTCTGAGATTGAGAAAAAGAAAAGAGCTGCAGCAGTTCCAGGCCGTGGAAGGTCCGGTGGCGGCGTCTCTTCGCCAAGTTGCCAAGCACACAACTGTGCAACAGATTTGACTGAAGCAAAGAGGTATCACCGCCGCCACAAGGTCTGCGAGTTTCACTCCAAGGCGGCGGTCGTCATGGTGGCCGGAATTCGCCAGCGTTTCTGTCAGCAATGCAGCAGGTTCCACGAGTTATCAGAATTTGATGAAGCTAAAAGGAGCTGTCGCAGGAGGCTGGCGGGGCACAACGAGCGTCGGCGGAAGAGCTCGGCCGAGGAAGGCACAGGGCGCAAAGGACCTGCCCCACAGTCGAAGGAAAGCCATTGCAGGCAGCTGGTGGAAGATCAAAGAGGCAGAATTCAGATGGCTCCTCCAGGGAGTTCTGGCTATAAACACCTGCATATCAGATGA

Coding sequence (CDS)

ATGGAGACGAAGAGCTTCGAAGGCAGGCAGAGTTTTAAAGATAAGGTGTATAGGGAAGGCGTGGTCGATGATGATGTAGATTACGAGACGGAGGAGGAAGAGGTTGCCGGAGGAGGTCCTCATGGTTGTGCTGCATTGGGTTGTTCTGAGATTGAGAAAAAGAAAAGAGCTGCAGCAGTTCCAGGCCGTGGAAGGTCCGGTGGCGGCGTCTCTTCGCCAAGTTGCCAAGCACACAACTGTGCAACAGATTTGACTGAAGCAAAGAGGTATCACCGCCGCCACAAGGTCTGCGAGTTTCACTCCAAGGCGGCGGTCGTCATGGTGGCCGGAATTCGCCAGCGTTTCTGTCAGCAATGCAGCAGGTTCCACGAGTTATCAGAATTTGATGAAGCTAAAAGGAGCTGTCGCAGGAGGCTGGCGGGGCACAACGAGCGTCGGCGGAAGAGCTCGGCCGAGGAAGGCACAGGGCGCAAAGGACCTGCCCCACAGTCGAAGGAAAGCCATTGCAGGCAGCTGGTGGAAGATCAAAGAGGCAGAATTCAGATGGCTCCTCCAGGGAGTTCTGGCTATAAACACCTGCATATCAGATGA

Protein sequence

METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAEEGTGRKGPAPQSKESHCRQLVEDQRGRIQMAPPGSSGYKHLHIR

Homology

[Close]

BLAST of Moc11g10260 vs. NCBI nr
Match: XP_022937043.1 (squamosa promoter-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 316.2 bits (809), Expect = 1.9e-82
Identity = 161/202 (79.70%), Postives = 173/202 (85.64%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHG---CAALGCSEIEKKKRA 60
           ME KS+EG+ + KDK Y+EGV+DDD++YETEEE+V GGG  G   C ALG  E EKKKR 
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  AAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            +V GRGRSG GVSSPSCQAHNC TDL+EAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TSVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAE   E T RKG A QSKE HCRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSASQSKEGHCRQLME 180

Query: 181 DQRGRIQMAPPGSSGYKHLHIR 197
           DQR RIQMAP GSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Moc11g10260 vs. NCBI nr
Match: XP_023536105.1 (squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.8 bits (808), Expect = 2.5e-82
Identity = 161/202 (79.70%), Postives = 172/202 (85.15%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHG---CAALGCSEIEKKKRA 60
           ME KS+EG+ + KDK Y+EGV+DDD++YETEEE+V GGG  G   C ALG  E EKKKR 
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  AAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            AV GRGRSG GVSSPSCQAHNC TDL+EAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TAVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAE   E T RKG   QSKE HCRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSVSQSKEGHCRQLME 180

Query: 181 DQRGRIQMAPPGSSGYKHLHIR 197
           DQR RIQMAP GSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Moc11g10260 vs. NCBI nr
Match: XP_022976580.1 (squamosa promoter-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 2.5e-82
Identity = 163/202 (80.69%), Postives = 173/202 (85.64%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHG---CAALGCSEIEKKKRA 60
           ME KS+EG+ + KDK YREGVVDDD++YETEEE+V GGG  G   C ALG  E EKKKR 
Sbjct: 1   MEAKSYEGKHNLKDKAYREGVVDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  AAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            AV GRGRSG GVSSPSCQAHNC TDL+EAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TAVSGRGRSGVGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRK+SAE   E T RKGPA QSKE  CRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAECQGESTNRKGPASQSKEGQCRQLME 180

Query: 181 DQRGRIQMAPPGSSGYKHLHIR 197
           DQR RIQMAP GSSGYKHLHIR
Sbjct: 181 DQRTRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Moc11g10260 vs. NCBI nr
Match: XP_038898687.1 (squamosa promoter-binding-like protein 3 [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 5.6e-82
Identity = 165/202 (81.68%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAG---GGPHGCAALGCSEIEKKKRA 60
           ME KS EG+ +FKDK  REG+VDDD++YET EEEV G   GG + C ALG  E EKKKR 
Sbjct: 1   MEAKSIEGKHNFKDKTCREGMVDDDLEYET-EEEVGGAGHGGSNACTALGYFENEKKKRG 60

Query: 61  AAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
           AAV GRGRSGG VSSPSCQAHNCATDL+EAKRYHRRHKVCE HSKAAVVMVAGIRQRFCQ
Sbjct: 61  AAVSGRGRSGGCVSSPSCQAHNCATDLSEAKRYHRRHKVCELHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAE   E T RKG  PQSKESHCRQLVE
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTSRKGSTPQSKESHCRQLVE 180

Query: 181 DQRGRIQMAPPGSSGYKHLHIR 197
           DQR RIQ+APPGSSGYKHLHIR
Sbjct: 181 DQRSRIQIAPPGSSGYKHLHIR 201

[Close]

BLAST of Moc11g10260 vs. NCBI nr
Match: KAG7024822.1 (Squamosa promoter-binding-like protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81
Identity = 160/202 (79.21%), Postives = 172/202 (85.15%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHG---CAALGCSEIEKKKRA 60
           ME KS+EG+ + KDK Y+EGV+DDD++YETEEE+V GGG  G   C ALG  E EKKKR 
Sbjct: 47  MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 106

Query: 61  AAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            AV GRGRSG GVSSPSCQAHNC TDL+EAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 107 TAVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 166

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFD+AKRSCRRRLAGHNERRRKSSAE   E T RKG A QSKE HCRQL+E
Sbjct: 167 QCSRFHELTEFDDAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSASQSKEGHCRQLME 226

Query: 181 DQRGRIQMAPPGSSGYKHLHIR 197
           DQR RIQMAP GSSGYK LHIR
Sbjct: 227 DQRSRIQMAPTGSSGYKQLHIR 248

[Close]

BLAST of Moc11g10260 vs. ExPASy Swiss-Prot
Match: Q6Z461 (Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL13 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.8e-34
Identity = 80/134 (59.70%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 35  VAGGGPHG-------CAALGCSEIEKKKRAAAVPGRGRSGGGVSS-----PSCQAHNCAT 94
           VAGGG  G        A    S       AAA  G GR+GGG  S     P CQ   C  
Sbjct: 58  VAGGGGGGSSSSAAVAAGASSSSSSSSVAAAARRGAGRAGGGAPSGGGGGPRCQVERCGV 117

Query: 95  DLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCSRFHELSEFDEAKRSCRRRLAGH 154
           DL+EA RY+RRHKVC+ HSK  VV+VAG+RQRFCQQCSRFHEL+EFD+AKRSCRRRLAGH
Sbjct: 118 DLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRSCRRRLAGH 177

Query: 155 NERRRKSSAEEGTG 157
           NERRRKS+A+   G
Sbjct: 178 NERRRKSAADTAHG 191

[Close]

BLAST of Moc11g10260 vs. ExPASy Swiss-Prot
Match: Q9S7A9 (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.3e-33
Identity = 91/201 (45.27%), Postives = 115/201 (57.21%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAV 60
           ME K  +G+   K K Y   +V++D++ +T+EEE  G                  R    
Sbjct: 1   MEGKRSQGQGYMKKKSY---LVEEDMETDTDEEEEVG------------------RDRVR 60

Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
             RG    G S   CQ   C  D+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQQCS
Sbjct: 61  GSRGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCS 120

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRKSSAE----EGTGRKGPAPQSKESHCRQLVEDQ 180
           RFH+L EFDEAKRSCRRRLAGHNERRRKSS E    EG+GR+G   Q        +   +
Sbjct: 121 RFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV------VMQNQE 174

Query: 181 RGRIQMA-PPGSSGYKHLHIR 197
           R R++M  P  +S +K   IR
Sbjct: 181 RSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Moc11g10260 vs. ExPASy Swiss-Prot
Match: Q9S758 (Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.6e-33
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAV 60
           ME +  + R   KDK     +V+++++   + EE  GG             E K++    
Sbjct: 1   MEGQRTQRRGYLKDKATVSNLVEEEMENGMDGEEEDGGD------------EDKRKKVME 60

Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
             RG S   V S  CQ   C  +LTEAK+Y+RRH+VCE H+KA+   VAG+RQRFCQQCS
Sbjct: 61  RVRGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCS 120

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVEDQR 180
           RFHEL EFDEAKRSCRRRLAGHNERRRK S +   EG+GR+G + Q  ++  R  V+   
Sbjct: 121 RFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRRGFSGQLIQTQERNRVD--- 180

Query: 181 GRIQMAPPGSSGYKHLHIR 197
              +  P  +S +K   IR
Sbjct: 181 ---RKLPMTNSSFKRPQIR 181

[Close]

BLAST of Moc11g10260 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 68/99 (68.69%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 52  EKKKRAAAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGI 111
           E  K+  A+   G+   G +  SCQ  NCA ++T AK YHRRHKVCEFH+KA VV+ +G+
Sbjct: 29  EDSKKTRALTPSGKRASGSTQRSCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGL 88

Query: 112 RQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSS 151
           +QRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSS
Sbjct: 89  QQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSS 127

[Close]

BLAST of Moc11g10260 vs. ExPASy Swiss-Prot
Match: P93015 (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 6.8e-30
Identity = 73/152 (48.03%), Postives = 97/152 (63.82%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAV 60
           M     EG++S ++    E   ++  D +T EEE A              +EKK++    
Sbjct: 3   MRRSKAEGKRSLRELSEEEEEEEETEDEDTFEEEEA--------------LEKKQK---- 62

Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
            G+  S  GV    CQ  +C  D+++AK+YH+RHKVC+FH+KA  V ++G+ QRFCQQCS
Sbjct: 63  -GKATSSSGV----CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCS 122

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRKSSAE 153
           RFH LSEFDEAKRSCRRRLAGHNERRRKS+ +
Sbjct: 123 RFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]

BLAST of Moc11g10260 vs. ExPASy TrEMBL
Match: A0A6J1FEY0 (squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443461 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.4e-83
Identity = 161/202 (79.70%), Postives = 173/202 (85.64%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHG---CAALGCSEIEKKKRA 60
           ME KS+EG+ + KDK Y+EGV+DDD++YETEEE+V GGG  G   C ALG  E EKKKR 
Sbjct: 1   MEAKSYEGKHNLKDKAYKEGVIDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  AAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            +V GRGRSG GVSSPSCQAHNC TDL+EAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TSVSGRGRSGSGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAE   E T RKG A QSKE HCRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAECQGESTNRKGSASQSKEGHCRQLME 180

Query: 181 DQRGRIQMAPPGSSGYKHLHIR 197
           DQR RIQMAP GSSGYKHLHIR
Sbjct: 181 DQRSRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Moc11g10260 vs. ExPASy TrEMBL
Match: A0A6J1IJV6 (squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476934 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 163/202 (80.69%), Postives = 173/202 (85.64%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHG---CAALGCSEIEKKKRA 60
           ME KS+EG+ + KDK YREGVVDDD++YETEEE+V GGG  G   C ALG  E EKKKR 
Sbjct: 1   MEAKSYEGKHNLKDKAYREGVVDDDLEYETEEEDVGGGGHGGTNACTALGYYENEKKKRG 60

Query: 61  AAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120
            AV GRGRSG GVSSPSCQAHNC TDL+EAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ
Sbjct: 61  TAVSGRGRSGVGVSSPSCQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQ 120

Query: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVE 180
           QCSRFHEL+EFDEAKRSCRRRLAGHNERRRK+SAE   E T RKGPA QSKE  CRQL+E
Sbjct: 121 QCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAECQGESTNRKGPASQSKEGQCRQLME 180

Query: 181 DQRGRIQMAPPGSSGYKHLHIR 197
           DQR RIQMAP GSSGYKHLHIR
Sbjct: 181 DQRTRIQMAPTGSSGYKHLHIR 202

[Close]

BLAST of Moc11g10260 vs. ExPASy TrEMBL
Match: A0A0A0L3D9 (Squamosa promoter-binding protein OS=Cucumis sativus OX=3659 GN=Csa_4G631590 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 163/206 (79.13%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHG-----CAALGCSEIEKKK 60
           M+ KSFEG+ +FKDK     VVDDD +YETEEEEV GGG  G     C ALG  + EKKK
Sbjct: 1   MDAKSFEGKHNFKDKT----VVDDDFEYETEEEEVGGGGGGGSNSNACNALGYFDNEKKK 60

Query: 61  RAAAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRF 120
           R AAV GRG+SGG VS PSCQAHNCA DL+EAKRYHRRHKVCEFHSKAA+VMVAGIRQRF
Sbjct: 61  RGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRF 120

Query: 121 CQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAP--QSKESHCR 180
           CQQCSRFHEL+EFDEAKRSCRRRLAGHNERRRKSSAE   E T RKG AP  QSKESHCR
Sbjct: 121 CQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKESHCR 180

Query: 181 QLVEDQRGRIQMAPPGSSGYKHLHIR 197
           QLVEDQR RIQMAPPGSSGYKHLHIR
Sbjct: 181 QLVEDQRSRIQMAPPGSSGYKHLHIR 202

[Close]

BLAST of Moc11g10260 vs. ExPASy TrEMBL
Match: A0A5D3DWS3 (Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001760 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 158/204 (77.45%), Postives = 170/204 (83.33%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGG----PHGCAALGCSEIEKKKR 60
           M+ KSFEG+ + KDK     VVDDD +YETEEEEV GGG     + C ALG  + EK+KR
Sbjct: 1   MDAKSFEGKHNSKDKT----VVDDDFEYETEEEEVGGGGGGSNSNACNALGYFDNEKRKR 60

Query: 61  AAAVPGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFC 120
            AAV GRG+SGG VSSPSCQAHNCA DL+EAKRYHRRHKVCEFHSKAA+VMVAGIRQRFC
Sbjct: 61  GAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFC 120

Query: 121 QQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRK-GPAPQSKESHCRQL 180
           QQCSRFHEL+EFDEAKRSCRRRLAGHNERRRK+SAE   E T RK  P  QSKESHCRQL
Sbjct: 121 QQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQL 180

Query: 181 VEDQRGRIQMAPPGSSGYKHLHIR 197
           VEDQR RIQMAPPGSSGYKHLHIR
Sbjct: 181 VEDQRSRIQMAPPGSSGYKHLHIR 200

[Close]

BLAST of Moc11g10260 vs. ExPASy TrEMBL
Match: A0A1S4E4C7 (squamosa promoter-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501851 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.7e-73
Identity = 151/200 (75.50%), Postives = 163/200 (81.50%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAV 60
           M+ KSFEG+ + KDK     VVDDD +YETEEEEV GGG             +K++ AAV
Sbjct: 1   MDAKSFEGKHNSKDKT----VVDDDFEYETEEEEVGGGG------------GEKEKGAAV 60

Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
            GRG+SGG VSSPSCQAHNCA DL+EAKRYHRRHKVCEFHSKAA+VMVAGIRQRFCQQCS
Sbjct: 61  SGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCS 120

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRK-GPAPQSKESHCRQLVEDQ 180
           RFHEL+EFDEAKRSCRRRLAGHNERRRK+SAE   E T RK  P  QSKESHCRQLVEDQ
Sbjct: 121 RFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLVEDQ 180

Query: 181 RGRIQMAPPGSSGYKHLHIR 197
           R RIQMAPPGSSGYKHLHIR
Sbjct: 181 RSRIQMAPPGSSGYKHLHIR 184

[Close]

BLAST of Moc11g10260 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 91/201 (45.27%), Postives = 115/201 (57.21%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAV 60
           ME K  +G+   K K Y   +V++D++ +T+EEE  G                  R    
Sbjct: 1   MEGKRSQGQGYMKKKSY---LVEEDMETDTDEEEEVG------------------RDRVR 60

Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
             RG    G S   CQ   C  D+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQQCS
Sbjct: 61  GSRGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCS 120

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRKSSAE----EGTGRKGPAPQSKESHCRQLVEDQ 180
           RFH+L EFDEAKRSCRRRLAGHNERRRKSS E    EG+GR+G   Q        +   +
Sbjct: 121 RFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV------VMQNQE 174

Query: 181 RGRIQMA-PPGSSGYKHLHIR 197
           R R++M  P  +S +K   IR
Sbjct: 181 RSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Moc11g10260 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 91/201 (45.27%), Postives = 115/201 (57.21%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAV 60
           ME K  +G+   K K Y   +V++D++ +T+EEE  G                  R    
Sbjct: 1   MEGKRSQGQGYMKKKSY---LVEEDMETDTDEEEEVG------------------RDRVR 60

Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
             RG    G S   CQ   C  D+ EAK YHRRHKVCE H+KA+ V ++G+ QRFCQQCS
Sbjct: 61  GSRGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCS 120

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRKSSAE----EGTGRKGPAPQSKESHCRQLVEDQ 180
           RFH+L EFDEAKRSCRRRLAGHNERRRKSS E    EG+GR+G   Q        +   +
Sbjct: 121 RFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV------VMQNQE 174

Query: 181 RGRIQMA-PPGSSGYKHLHIR 197
           R R++M  P  +S +K   IR
Sbjct: 181 RSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Moc11g10260 vs. TAIR 10
Match: AT3G15270.1 (squamosa promoter binding protein-like 5 )

HSP 1 Score: 142.1 bits (357), Expect = 4.7e-34
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAV 60
           ME +  + R   KDK     +V+++++   + EE  GG             E K++    
Sbjct: 1   MEGQRTQRRGYLKDKATVSNLVEEEMENGMDGEEEDGGD------------EDKRKKVME 60

Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
             RG S   V S  CQ   C  +LTEAK+Y+RRH+VCE H+KA+   VAG+RQRFCQQCS
Sbjct: 61  RVRGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCS 120

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRKSSAE---EGTGRKGPAPQSKESHCRQLVEDQR 180
           RFHEL EFDEAKRSCRRRLAGHNERRRK S +   EG+GR+G + Q  ++  R  V+   
Sbjct: 121 RFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRRGFSGQLIQTQERNRVD--- 180

Query: 181 GRIQMAPPGSSGYKHLHIR 197
              +  P  +S +K   IR
Sbjct: 181 ---RKLPMTNSSFKRPQIR 181

[Close]

BLAST of Moc11g10260 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 132.1 bits (331), Expect = 4.8e-31
Identity = 73/152 (48.03%), Postives = 97/152 (63.82%), Query Frame = 0


Query: 1   METKSFEGRQSFKDKVYREGVVDDDVDYETEEEEVAGGGPHGCAALGCSEIEKKKRAAAV 60
           M     EG++S ++    E   ++  D +T EEE A              +EKK++    
Sbjct: 3   MRRSKAEGKRSLRELSEEEEEEEETEDEDTFEEEEA--------------LEKKQK---- 62

Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
            G+  S  GV    CQ  +C  D+++AK+YH+RHKVC+FH+KA  V ++G+ QRFCQQCS
Sbjct: 63  -GKATSSSGV----CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCS 122

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRKSSAE 153
           RFH LSEFDEAKRSCRRRLAGHNERRRKS+ +
Sbjct: 123 RFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]

BLAST of Moc11g10260 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 61  PGRGRSGGGVSSPSCQAHNCATDLTEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCS 120
           PG       +S+P CQA  C  DL+ AK YHRRHKVCEFHSKA+ V+ AG+ QRFCQQCS
Sbjct: 174 PGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 233

Query: 121 RFHELSEFDEAKRSCRRRLAGHNERRRK----SSAEEGTGRKGPAPQS 165
           RFH LSEFD  KRSCR+RLA HN RRRK    +SA + TG     P+S
Sbjct: 234 RFHLLSEFDNGKRSCRKRLADHNRRRRKCHQSASATQDTGTGKTTPKS 281

The following BLAST results are available for this feature:

BLAST of Moc11g10260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937043.1	1.9e-82	79.70	squamosa promoter-binding protein 1-like [Cucurbita moschata]	[more]
XP_023536105.1	2.5e-82	79.70	squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976580.1	2.5e-82	80.69	squamosa promoter-binding protein 1-like [Cucurbita maxima]	[more]
XP_038898687.1	5.6e-82	81.68	squamosa promoter-binding-like protein 3 [Benincasa hispida]	[more]
KAG7024822.1	1.6e-81	79.21	Squamosa promoter-binding-like protein 5, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Moc11g10260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6Z461	7.8e-34	59.70	Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9S7A9	2.3e-33	45.27	Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4...	[more]
Q9S758	6.6e-33	44.72	Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5...	[more]
Q38741	1.1e-32	68.69	Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV...	[more]
P93015	6.8e-30	48.03	Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3...	[more]

BLAST of Moc11g10260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEY0	9.4e-83	79.70	squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IJV6	1.2e-82	80.69	squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A0A0L3D9	1.3e-79	79.13	Squamosa promoter-binding protein OS=Cucumis sativus OX=3659 GN=Csa_4G631590 PE=...	[more]
A0A5D3DWS3	2.0e-77	77.45	Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S4E4C7	6.7e-73	75.50	squamosa promoter-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501851...	[more]

BLAST of Moc11g10260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53160.2	1.6e-34	45.27	squamosa promoter binding protein-like 4	[more]
AT1G53160.1	1.6e-34	45.27	squamosa promoter binding protein-like 4	[more]
AT3G15270.1	4.7e-34	44.72	squamosa promoter binding protein-like 5	[more]
AT2G33810.1	4.8e-31	48.03	squamosa promoter binding protein-like 3	[more]
AT1G02065.1	1.2e-29	60.19	squamosa promoter binding protein-like 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 65..136 e-value: 9.5E-33 score: 114.2
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 73..152
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 75..148 e-value: 2.5E-31 score: 107.8
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 72..149 score: 32.231155
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 65..150 e-value: 3.4E-46 score: 153.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..196
None	No IPR available	PANTHER	PTHR31251:SF149	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN	coord: 10..196
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 10..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g10260.1	Moc11g10260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding