Moc11g07660 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g07660
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ARID domain-containing protein
Location	chr11: 5414670 .. 5415632 (+)
RNA-Seq Expression	Moc11g07660
Synteny	Moc11g07660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTGGGCAGAGATGCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAGGCTTGA

mRNA sequence

ATGAAATTGGGCAGAGATGCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAGGCTTGA

Coding sequence (CDS)

ATGAAATTGGGCAGAGATGCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAGGCTTGA

Protein sequence

MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKETWVGRDLFSRSRSWKA

Homology

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BLAST of Moc11g07660 vs. NCBI nr
Match: XP_022147766.1 (uncharacterized protein LOC111016595 [Momordica charantia])

HSP 1 Score: 603.2 bits (1554), Expect = 1.3e-168
Identity = 320/321 (99.69%), Postives = 320/321 (99.69%), Query Frame = 0


Query: 1   MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
           MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA
Sbjct: 1   MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60

Query: 61  ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
           ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR
Sbjct: 61  ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120

Query: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN 180
           RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN
Sbjct: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN 180

Query: 181 QVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQ 240
           QVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQ
Sbjct: 181 QVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQ 240

Query: 241 -EEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSS 300
            EEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSS
Sbjct: 241 EEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSS 300

Query: 301 EIAKETWVGRDLFSRSRSWKA 321
           EIAKETWVGRDLFSRSRSWKA
Sbjct: 301 EIAKETWVGRDLFSRSRSWKA 321

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BLAST of Moc11g07660 vs. NCBI nr
Match: XP_038898663.1 (transcription initiation factor IIE subunit alpha [Benincasa hispida])

HSP 1 Score: 438.0 bits (1125), Expect = 7.2e-119
Identity = 251/333 (75.38%), Postives = 276/333 (82.88%), Query Frame = 0


Query: 1   MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
           MKLGR+ K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R SHRH+HRRRK  SA
Sbjct: 1   MKLGRENKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLSHRHYHRRRK--SA 60

Query: 61  ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
            SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + KSWQSVMEEIERIHNRRKLRR
Sbjct: 61  ESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLRR 120

Query: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN 180
           RR +WVESLGFKKDIMQFLTCLRNIRFDFRCF+AFP  DFTTEEE+EEEEEEEE KSQ N
Sbjct: 121 RRFHWVESLGFKKDIMQFLTCLRNIRFDFRCFRAFPATDFTTEEEEEEEEEEEE-KSQGN 180

Query: 181 QVGVEGNESSRTAFSKWFMVLQESGASNGICRESN----------GPPLAPPKNALLLMR 240
           QVGV+ NESSRTAFSKWFMVLQE+G SN + RES              +APPKNALLLMR
Sbjct: 181 QVGVDENESSRTAFSKWFMVLQENG-SNELKRESKILCSDDDVSIEAAMAPPKNALLLMR 240

Query: 241 CRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEM 300
           CRSAPAK W EEE EEEE+++++++E+E        EVKVKKSLKWLMEEENRERLVME 
Sbjct: 241 CRSAPAKRWLEEESEEEEDDDDDDDEKE--------EVKVKKSLKWLMEEENRERLVMET 300

Query: 301 GPDFCRMSSEIAKETWV----GRDLFSRSRSWK 320
           G DFCRM+S+IAKETWV     RDLF+RS SWK
Sbjct: 301 GTDFCRMTSDIAKETWVVSEKSRDLFTRSHSWK 319

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BLAST of Moc11g07660 vs. NCBI nr
Match: XP_004142611.2 (transcription initiation factor IIE subunit alpha [Cucumis sativus] >KAE8649637.1 hypothetical protein Csa_012410 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 5.7e-108
Identity = 232/330 (70.30%), Postives = 268/330 (81.21%), Query Frame = 0


Query: 1   MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
           MKL R+ +K I S+DLLVCFPSRS+L LMP PLCSPARG DS+K R  +R +HRRRK  S
Sbjct: 11  MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRK--S 70

Query: 61  AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
           A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + KSWQSVMEEIERIHNRRKLR
Sbjct: 71  AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 130

Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQE 180
           RRR NW+ES GFKKDIMQFLTCLR +RFDFRCF+AFPE DFTTEEE+EEEEEEEE + ++
Sbjct: 131 RRRFNWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEE-EEEK 190

Query: 181 NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNG----------PPLAPPKNALLLM 240
           NQVG+E NESSRTAFSKWFMVLQE+G SN + R+SN             +APP+NALLLM
Sbjct: 191 NQVGIEENESSRTAFSKWFMVLQENG-SNELKRDSNSRCYEDDESIEATMAPPRNALLLM 250

Query: 241 RCRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVME 300
           RC+SAPA+ W EEE EEE++E+E+E+E+E        +VKVKKSLKWLMEEENRER+VME
Sbjct: 251 RCKSAPARRWMEEESEEEDDEKEKEKEKE--------KVKVKKSLKWLMEEENRERVVME 310

Query: 301 MGPDFCRMSSEIAKETWVGRDLFSRSRSWK 320
           MG DFCRM S+ AKE       F+RS+SWK
Sbjct: 311 MGTDFCRMISDNAKE-------FTRSQSWK 319

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BLAST of Moc11g07660 vs. NCBI nr
Match: XP_008444111.1 (PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo] >KAA0064246.1 transcription initiation factor IIE subunit alpha-like [Cucumis melo var. makuwa] >TYK18616.1 transcription initiation factor IIE subunit alpha-like [Cucumis melo var. makuwa])

HSP 1 Score: 395.2 bits (1014), Expect = 5.4e-106
Identity = 230/329 (69.91%), Postives = 257/329 (78.12%), Query Frame = 0


Query: 1   MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
           MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRK  S
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRK--S 67

Query: 61  AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
           A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + KSWQSVMEEIERIHNRRKLR
Sbjct: 68  AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 127

Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQE 180
           RRR  WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+   ++
Sbjct: 128 RRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEED---EK 187

Query: 181 NQVGVEGNESSRTAFSKWFMVLQESGA------SNGICR---ESNGPPLAPPKNALLLMR 240
           NQVG+E NESSRTAFSKWFMVLQE+G+      S  +C    ES    +APP NALLLMR
Sbjct: 188 NQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMR 247

Query: 241 CRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEM 300
           CRSAPA+ W EEE EE ++E+E              +VKVKKSLKWLMEEENRERLV+EM
Sbjct: 248 CRSAPARRWMEEESEEGDDEKE--------------KVKVKKSLKWLMEEENRERLVVEM 307

Query: 301 GPDFCRMSSEIAKETWVGRDLFSRSRSWK 320
           G DFCRM+S+ AKE       F+RS+SWK
Sbjct: 308 GTDFCRMTSDNAKE-------FTRSQSWK 308

[Close]

BLAST of Moc11g07660 vs. NCBI nr
Match: XP_018812021.1 (uncharacterized protein LOC108984494 [Juglans regia] >KAF5456186.1 hypothetical protein F2P56_025693 [Juglans regia])

HSP 1 Score: 360.1 bits (923), Expect = 1.9e-95
Identity = 217/344 (63.08%), Postives = 255/344 (74.13%), Query Frame = 0


Query: 4   GRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHR---RRKST-- 63
           GR+AKA  SADLLVCFPSR++LTLMPKP+CSPAR  + NK   SH HHH    ++ ST  
Sbjct: 3   GREAKAAPSADLLVCFPSRAHLTLMPKPICSPARHSEPNKRHHSHHHHHHHHLKKASTRG 62

Query: 64  -SAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRK 123
              ASPL+WAK K MGSEISEP+SPKVTCAGQIK+RPKT SCKSWQSVMEEIERIHN RK
Sbjct: 63  GGQASPLLWAKTKPMGSEISEPTSPKVTCAGQIKVRPKTSSCKSWQSVMEEIERIHNNRK 122

Query: 124 LRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKS 183
             ++R +WVE+LG KKDIMQFLTCLR+IRFDFRCF +FPE+D TTE+ED   +EEE G+ 
Sbjct: 123 -HKKRPSWVEALGLKKDIMQFLTCLRSIRFDFRCFGSFPESDITTEDED---DEEEIGEC 182

Query: 184 QENQVGVE---GNESSRTAFSKWFMVLQESGASNGICR------------ESNGPPLAPP 243
           Q+N +G E   GNE+SRTAFSKWFMVLQE+  +N +C+            ES     APP
Sbjct: 183 QDNHLGTERSDGNETSRTAFSKWFMVLQEN-QNNKLCKQEKRETKKTYDDESIAASAAPP 242

Query: 244 KNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEEN 303
            NALLLMRCRSAPAK W  E+E+EEEE EE+E+EE        KEV+  KSLK LMEEE 
Sbjct: 243 PNALLLMRCRSAPAKGWLVEKEDEEEEGEEDEDEEGTG-----KEVRKAKSLKCLMEEEK 302

Query: 304 RER----LVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 320
           R +    +VM+   DF ++SS+IAKETWVG   RD FSRSRSWK
Sbjct: 303 RTKKENMVVMKYDTDFYKISSDIAKETWVGGGMRDPFSRSRSWK 336

[Close]

BLAST of Moc11g07660 vs. ExPASy TrEMBL
Match: A0A6J1D3C2 (uncharacterized protein LOC111016595 OS=Momordica charantia OX=3673 GN=LOC111016595 PE=4 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 6.3e-169
Identity = 320/321 (99.69%), Postives = 320/321 (99.69%), Query Frame = 0


Query: 1   MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
           MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA
Sbjct: 1   MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60

Query: 61  ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
           ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR
Sbjct: 61  ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120

Query: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN 180
           RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN
Sbjct: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN 180

Query: 181 QVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQ 240
           QVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQ
Sbjct: 181 QVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQ 240

Query: 241 -EEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSS 300
            EEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSS
Sbjct: 241 EEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSS 300

Query: 301 EIAKETWVGRDLFSRSRSWKA 321
           EIAKETWVGRDLFSRSRSWKA
Sbjct: 301 EIAKETWVGRDLFSRSRSWKA 321

[Close]

BLAST of Moc11g07660 vs. ExPASy TrEMBL
Match: A0A0A0L1Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.8e-108
Identity = 232/330 (70.30%), Postives = 268/330 (81.21%), Query Frame = 0


Query: 1   MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
           MKL R+ +K I S+DLLVCFPSRS+L LMP PLCSPARG DS+K R  +R +HRRRK  S
Sbjct: 1   MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRK--S 60

Query: 61  AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
           A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + KSWQSVMEEIERIHNRRKLR
Sbjct: 61  AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 120

Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQE 180
           RRR NW+ES GFKKDIMQFLTCLR +RFDFRCF+AFPE DFTTEEE+EEEEEEEE + ++
Sbjct: 121 RRRFNWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEE-EEEK 180

Query: 181 NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNG----------PPLAPPKNALLLM 240
           NQVG+E NESSRTAFSKWFMVLQE+G SN + R+SN             +APP+NALLLM
Sbjct: 181 NQVGIEENESSRTAFSKWFMVLQENG-SNELKRDSNSRCYEDDESIEATMAPPRNALLLM 240

Query: 241 RCRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVME 300
           RC+SAPA+ W EEE EEE++E+E+E+E+E        +VKVKKSLKWLMEEENRER+VME
Sbjct: 241 RCKSAPARRWMEEESEEEDDEKEKEKEKE--------KVKVKKSLKWLMEEENRERVVME 300

Query: 301 MGPDFCRMSSEIAKETWVGRDLFSRSRSWK 320
           MG DFCRM S+ AKE       F+RS+SWK
Sbjct: 301 MGTDFCRMISDNAKE-------FTRSQSWK 309

[Close]

BLAST of Moc11g07660 vs. ExPASy TrEMBL
Match: A0A5D3D503 (Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001490 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.6e-106
Identity = 230/329 (69.91%), Postives = 257/329 (78.12%), Query Frame = 0


Query: 1   MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
           MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRK  S
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRK--S 67

Query: 61  AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
           A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + KSWQSVMEEIERIHNRRKLR
Sbjct: 68  AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 127

Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQE 180
           RRR  WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+   ++
Sbjct: 128 RRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEED---EK 187

Query: 181 NQVGVEGNESSRTAFSKWFMVLQESGA------SNGICR---ESNGPPLAPPKNALLLMR 240
           NQVG+E NESSRTAFSKWFMVLQE+G+      S  +C    ES    +APP NALLLMR
Sbjct: 188 NQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMR 247

Query: 241 CRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEM 300
           CRSAPA+ W EEE EE ++E+E              +VKVKKSLKWLMEEENRERLV+EM
Sbjct: 248 CRSAPARRWMEEESEEGDDEKE--------------KVKVKKSLKWLMEEENRERLVVEM 307

Query: 301 GPDFCRMSSEIAKETWVGRDLFSRSRSWK 320
           G DFCRM+S+ AKE       F+RS+SWK
Sbjct: 308 GTDFCRMTSDNAKE-------FTRSQSWK 308

[Close]

BLAST of Moc11g07660 vs. ExPASy TrEMBL
Match: A0A1S3B949 (uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.6e-106
Identity = 230/329 (69.91%), Postives = 257/329 (78.12%), Query Frame = 0


Query: 1   MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
           MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRK  S
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRK--S 67

Query: 61  AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
           A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + KSWQSVMEEIERIHNRRKLR
Sbjct: 68  AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 127

Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQE 180
           RRR  WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+   ++
Sbjct: 128 RRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEED---EK 187

Query: 181 NQVGVEGNESSRTAFSKWFMVLQESGA------SNGICR---ESNGPPLAPPKNALLLMR 240
           NQVG+E NESSRTAFSKWFMVLQE+G+      S  +C    ES    +APP NALLLMR
Sbjct: 188 NQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMR 247

Query: 241 CRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEM 300
           CRSAPA+ W EEE EE ++E+E              +VKVKKSLKWLMEEENRERLV+EM
Sbjct: 248 CRSAPARRWMEEESEEGDDEKE--------------KVKVKKSLKWLMEEENRERLVVEM 307

Query: 301 GPDFCRMSSEIAKETWVGRDLFSRSRSWK 320
           G DFCRM+S+ AKE       F+RS+SWK
Sbjct: 308 GTDFCRMTSDNAKE-------FTRSQSWK 308

[Close]

BLAST of Moc11g07660 vs. ExPASy TrEMBL
Match: A0A2I4DXY3 (uncharacterized protein LOC108984494 OS=Juglans regia OX=51240 GN=LOC108984494 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 9.3e-96
Identity = 217/344 (63.08%), Postives = 255/344 (74.13%), Query Frame = 0


Query: 4   GRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHR---RRKST-- 63
           GR+AKA  SADLLVCFPSR++LTLMPKP+CSPAR  + NK   SH HHH    ++ ST  
Sbjct: 3   GREAKAAPSADLLVCFPSRAHLTLMPKPICSPARHSEPNKRHHSHHHHHHHHLKKASTRG 62

Query: 64  -SAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRK 123
              ASPL+WAK K MGSEISEP+SPKVTCAGQIK+RPKT SCKSWQSVMEEIERIHN RK
Sbjct: 63  GGQASPLLWAKTKPMGSEISEPTSPKVTCAGQIKVRPKTSSCKSWQSVMEEIERIHNNRK 122

Query: 124 LRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKS 183
             ++R +WVE+LG KKDIMQFLTCLR+IRFDFRCF +FPE+D TTE+ED   +EEE G+ 
Sbjct: 123 -HKKRPSWVEALGLKKDIMQFLTCLRSIRFDFRCFGSFPESDITTEDED---DEEEIGEC 182

Query: 184 QENQVGVE---GNESSRTAFSKWFMVLQESGASNGICR------------ESNGPPLAPP 243
           Q+N +G E   GNE+SRTAFSKWFMVLQE+  +N +C+            ES     APP
Sbjct: 183 QDNHLGTERSDGNETSRTAFSKWFMVLQEN-QNNKLCKQEKRETKKTYDDESIAASAAPP 242

Query: 244 KNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEEN 303
            NALLLMRCRSAPAK W  E+E+EEEE EE+E+EE        KEV+  KSLK LMEEE 
Sbjct: 243 PNALLLMRCRSAPAKGWLVEKEDEEEEGEEDEDEEGTG-----KEVRKAKSLKCLMEEEK 302

Query: 304 RER----LVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 320
           R +    +VM+   DF ++SS+IAKETWVG   RD FSRSRSWK
Sbjct: 303 RTKKENMVVMKYDTDFYKISSDIAKETWVGGGMRDPFSRSRSWK 336

[Close]

BLAST of Moc11g07660 vs. TAIR 10
Match: AT1G78110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). )

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-66
Identity = 173/339 (51.03%), Postives = 221/339 (65.19%), Query Frame = 0


Query: 11  HSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA-------ASP 70
           +SADLLVCFPSR++L L PKP+CSP+R  DS+  RR    HHRR+ S  +        SP
Sbjct: 16  YSADLLVCFPSRTHLALTPKPICSPSRPSDSSTNRRP---HHRRQLSKLSGGGGGGHGSP 75

Query: 71  LIWAK---PKTM-GSEISEPSSPKVTCAGQIKIRPKT--GSCKSWQSVMEEIERIHNRRK 130
           ++WAK    K M G EI+EP+SPKVTCAGQIK+RP    G  K+WQSVMEEIERIH+ R 
Sbjct: 76  VLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHDNRS 135

Query: 131 LRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKS 190
             +         G KKD+M FLTCLRNI+FDFRCF  F  AD T+++++EE+++++E   
Sbjct: 136 QSK-------FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEEDDDDDE--- 195

Query: 191 QENQVGVEGNESSRTAFSKWFMVLQE------SGASNGICRE------SNGPPLAPPKNA 250
           +E  V  E  E+S+T FSKWFMVLQE         +N  C E      +   P  PP NA
Sbjct: 196 EEEVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLEDTETEPAVPPPNA 255

Query: 251 LLLMRCRSAPAKSWQEEE-EEEEEEEEEEEEEEEAAAEEDEKEVKV-KKSLKWLMEEENR 310
           LLLMRCRSAPAKSW EE  + + E+E+ EE++EE   E+ E  +K  KK L+ LMEEE  
Sbjct: 256 LLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKTKKKDLRSLMEEEKM 315

Query: 311 ERLVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 320
           E ++M    +F R+SS+IAKETWV    +D  SRSRSWK
Sbjct: 316 ELVLMRYDTEFYRLSSDIAKETWVVGGIQDPLSRSRSWK 341

[Close]

BLAST of Moc11g07660 vs. TAIR 10
Match: AT1G22230.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78110.1); Has 2358 Blast hits to 1759 proteins in 159 species: Archae - 2; Bacteria - 36; Metazoa - 1046; Fungi - 203; Plants - 157; Viruses - 72; Other Eukaryotes - 842 (source: NCBI BLink). )

HSP 1 Score: 197.2 bits (500), Expect = 2.0e-50
Identity = 147/332 (44.28%), Postives = 203/332 (61.14%), Query Frame = 0


Query: 1   MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
           +K G    + +SADL+VCFPSR++L+L  K + SP+   +    RR +  HHRR  S  +
Sbjct: 2   IKGGGGKSSGYSADLMVCFPSRAHLSLPSKSISSPSSSFN----RRQNAPHHRRSISKLS 61

Query: 61  ASPLIWAKPKTMGSE-ISEPSSPKVTCAGQIKIR--PKTGSCKSWQSVMEEIERIHNRRK 120
           +S     + +  G E + EP+SPKVTCAGQIK+R   + G  K+WQS+M EIE+IH    
Sbjct: 62  SSGGGVRQNRGGGREVVEEPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIH---- 121

Query: 121 LRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKS 180
              R  +  +  G K+D+M FLTCLR+  FDFRCF AFP  D  +++E+E+EEEEEE + 
Sbjct: 122 ---RSKSESKFFGIKRDVMGFLTCLRD--FDFRCFGAFPPVDIISDDEEEDEEEEEEDEE 181

Query: 181 QENQVGVEGNESSRTAFSKWFMVLQESGASNGICRE------SNGPPLAPPKNALLLMRC 240
           ++       +ESS T FSKW MVL E   +N  C +      S+     PP NALLLMRC
Sbjct: 182 EDE------DESSGTVFSKWLMVLHEK-QNNEECVDGKENVFSDVETAVPPPNALLLMRC 241

Query: 241 RSAPAKSWQEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERL-VMEM 300
           RSAP K+W EE++EE EE +   ++     EE++  V  KK L+ LMEEE +  L VM  
Sbjct: 242 RSAPVKNWSEEKKEETEEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEKKMNLVVMNY 301

Query: 301 GPDFCRMSSEIAKETWVG---RDLFSRSRSWK 320
             ++ ++S++IAKETWV    +D   RSRSWK
Sbjct: 302 DTNYYKLSNDIAKETWVVGGIQDPLFRSRSWK 313

The following BLAST results are available for this feature:

BLAST of Moc11g07660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147766.1	1.3e-168	99.69	uncharacterized protein LOC111016595 [Momordica charantia]	[more]
XP_038898663.1	7.2e-119	75.38	transcription initiation factor IIE subunit alpha [Benincasa hispida]	[more]
XP_004142611.2	5.7e-108	70.30	transcription initiation factor IIE subunit alpha [Cucumis sativus] >KAE8649637....	[more]
XP_008444111.1	5.4e-106	69.91	PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo] >KAA0064246.1 tra...	[more]
XP_018812021.1	1.9e-95	63.08	uncharacterized protein LOC108984494 [Juglans regia] >KAF5456186.1 hypothetical ...	[more]

BLAST of Moc11g07660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g07660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3C2	6.3e-169	99.69	uncharacterized protein LOC111016595 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A0A0L1Z4	2.8e-108	70.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1	[more]
A0A5D3D503	2.6e-106	69.91	Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. maku...	[more]
A0A1S3B949	2.6e-106	69.91	uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=...	[more]
A0A2I4DXY3	9.3e-96	63.08	uncharacterized protein LOC108984494 OS=Juglans regia OX=51240 GN=LOC108984494 P...	[more]

BLAST of Moc11g07660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78110.1	1.2e-66	51.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G22230.1	2.0e-50	44.28	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 161..181
None	No IPR available	COILS	Coil	Coil	coord: 236..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..176
None	No IPR available	PANTHER	PTHR33448	CHLOROPLAST PROTEIN HCF243-RELATED	coord: 4..319
None	No IPR available	PANTHER	PTHR33448:SF3	OS09G0370000 PROTEIN	coord: 4..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g07660.1	Moc11g07660.1	mRNA