Moc11g05470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g05470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Coatomer subunit zeta
Location	chr11: 3628902 .. 3630777 (+)
RNA-Seq Expression	Moc11g05470
Synteny	Moc11g05470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTTGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTACCTTTTTCTTCTCCCTTACGTTGTCTTGCTCGACCGACTGAACATTCTTTTCACTGAATTTTTATGTTTCTGATGCGTGTTAGCGAGAAAGTGTGAATTTAATCGTTTCGTTCTGTAATTGATCAATTTGTTTTAGTTTTTCTGCTGATTGTTTTGATGATATTGTATGAAATGCGCGAATAGCTTCAGATATGCTCCCTTTTGGATTGAACTGGTTTGAGAATCATAGTGTTGAGGAGTGAAATGTAGAGGGAAGGATGCTGGATTAGGCGGATAGTAGTATCTGGATTCTACTATTACTTGGATTTAACTTAGAGTTCAATTCGTTAGGAATTCCTGGTCATCGAACGGTTGATCGTGATTTTTGTTTCTTTATTAGGTTTCATGGAGTTCCAGCGGAGGAGCGATTGCATTGGCGATCCTTTTTAGTGAAATTGGGGGCTGATAATCTCAAAGGTGCTAAAAATGAAGAGCTATATGTTGCTTCACACAAGTGAGTGGAATCTTCCGATCAGTTTTTCAGAAGCAATTATGAACGTTTCACTGTGGTTTATTATAAATAAAAAGTAGTCTTCGAAAAAAATGAGAAGAGTTTCAATTTCAATGGTTCCTCCTTCATACTCTGTATGTGAGGTACTGATTTTTGCTCTCCACCACCCTAGGGTGAAAAGGAGAAAATCAAAGGACAATGATGCTTCCTCTTCAATTGACTTCATTCTTAGTATTTTGATCTCATTCTGAAATATAAGAACTTGACTTTTAACATTTTCAAATGCGCATGGCGGAAATAGATGAAGTTTATTTGACTTAGTTGACTTTCTATAACAGATCTGTATACATAGTTTACACCGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAGTACGATGAATTAGCTTGTAAGTCAAGTCCACTTTCTTTTTGACTAAATCCTTTTTCTCCCTCCCGATAATGAAATTTATAATGTTTGTTTTGTATTTTTTGGTTTAACATGAACTTTCCTCAATTGGTCAAGACATTACTTACTTATAGGTGGAGGTTGAAATCCTTCCTTTGTTGAACTCAAAAAATAAACTTGATCTTTATGTTATTTTCCTCTGCATTAATGTCATTTTCTCTTCTTTAAGTGGCAGAAGTCATCTTTGTGATAACATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGTTTGTTTCTTGACAAATATGGAAAGATTTGTTTATGTCTCGATGAGATCGTCTGGACGGTATGTTATTTCGTTTTCCCCTCACTCAGATCAGAATCTTTCTTGTAGGTTTCATGGTTGAACTGACTGATCTCATGGGGCTAAAGGCTCAAAATCCATCTAGATATAGTGATAGATGTACACCTGTTAGAACTTTAATTTAAGAAAACGCTTTGCAAAATGTCTCTCAGAGTAGAAATTTTGGGGCATCTCATAATTGCAAAAGAATATCCAATATTGCATATCGACTACATCTGTCCTATTTTAGAACTTATAAAAACTAACATTTCATCATAGAAACGTACATCTCATAGGCTAAAGAATTAAAGGAGTTTCAGACTAAGATATCTGTAATCCATAATAATTGTATTTCAGCTCTAATAATATTCCTTTGGCTTAGTACTCTTAGACAGATAAATTTATTGCTTGTTCTATTATGTTATTGAATTTGATGGAGCGGTTAGCTTCTCACATCTTCAATCTTTCTGACATGTTCATGTGTGTGAAGGGCATCTTGGAGAACACGGAAAAAGATAGGATCAAGAGGCTGATAAGGTTGAAGCCTCCCACTGAGTTTTGA

mRNA sequence

ATGTTGCTTGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGAGTTCCAGCGGAGGAGCGATTGCATTGGCGATCCTTTTTAGTGAAATTGGGGGCTGATAATCTCAAAGGTGCTAAAAATGAAGAGCTATATGTTGCTTCACACAAATCTGTATACATAGTTTACACCGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAGTACGATGAATTAGCTTTGGCAGAAGTCATCTTTGTGATAACATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGTTTGTTTCTTGACAAATATGGAAAGATTTGTTTATGTCTCGATGAGATCGTCTGGACGGGCATCTTGGAGAACACGGAAAAAGATAGGATCAAGAGGCTGATAAGGTTGAAGCCTCCCACTGAGTTTTGA

Coding sequence (CDS)

ATGTTGCTTGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGAGTTCCAGCGGAGGAGCGATTGCATTGGCGATCCTTTTTAGTGAAATTGGGGGCTGATAATCTCAAAGGTGCTAAAAATGAAGAGCTATATGTTGCTTCACACAAATCTGTATACATAGTTTACACCGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAGTACGATGAATTAGCTTTGGCAGAAGTCATCTTTGTGATAACATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGTTTGTTTCTTGACAAATATGGAAAGATTTGTTTATGTCTCGATGAGATCGTCTGGACGGGCATCTTGGAGAACACGGAAAAAGATAGGATCAAGAGGCTGATAAGGTTGAAGCCTCCCACTGAGTTTTGA

Protein sequence

MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPTEF

Homology

[Close]

BLAST of Moc11g05470 vs. NCBI nr
Match: XP_022134177.1 (uncharacterized protein LOC111006502 [Momordica charantia])

HSP 1 Score: 295.4 bits (755), Expect = 2.7e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPPTEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 147

[Close]

BLAST of Moc11g05470 vs. NCBI nr
Match: XP_008466411.1 (PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 2.2e-75
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Moc11g05470 vs. NCBI nr
Match: KAA0038809.1 (SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Moc11g05470 vs. NCBI nr
Match: XP_038896955.1 (TSET complex member tstD [Benincasa hispida])

HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK+PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKSPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Moc11g05470 vs. NCBI nr
Match: XP_022936551.1 (uncharacterized protein LOC111443125 [Cucurbita moschata] >XP_022976214.1 uncharacterized protein LOC111476670 [Cucurbita maxima] >KAG6591575.1 TSET complex member tstD, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024463.1 hypothetical protein SDJN02_13278 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.3 bits (739), Expect = 1.9e-74
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGKAPTER FLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVVTSSIKDACGKAPTERSFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Moc11g05470 vs. ExPASy Swiss-Prot
Match: C0HLF1 (TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.5e-15
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY 60
           M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V       
Sbjct: 1   MINSLLITNNNGNIVFSKYYSNINDEKQSEYEKLLYQFTKDEWVNSKNEKHLVTEFSGYI 60

Query: 61  IVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDAC-GKAPTERLFLDKYGKICLCL 120
            V+T +GD+ +++ G +E DELAL++V F I  S+KD C  K  TE+ F+++  K  L L
Sbjct: 61  TVFTNVGDLMLFLCGSEEMDELALSDVFFPIIESLKDICKKKGVTEQNFIEQIPKFILYL 120

Query: 121 DEIVWTGILENTEKDRIKRLIRLK 143
           DEI+  G L+  + + I+    LK
Sbjct: 121 DEIIQRGHLDQVQLESIQNYSSLK 144

[Close]

BLAST of Moc11g05470 vs. ExPASy Swiss-Prot
Match: Q5NA06 (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-05
Identity = 34/131 (25.95%), Postives = 59/131 (45.04%), Query Frame = 0


Query: 5   VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTV 64
           +L+ +S G  +  +++          ++F   + A   K +   E  +    S ++VY  
Sbjct: 10  ILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKF 69

Query: 65  LGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDEIVWT 124
           + D+  +V G DE +EL LA V+   + +I          R  L+    I LCLDE+V  
Sbjct: 70  IQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDG 129

Query: 125 GILENTEKDRI 136
           GI+  T+   I
Sbjct: 130 GIVLETDAKAI 140

[Close]

BLAST of Moc11g05470 vs. ExPASy Swiss-Prot
Match: Q54CA7 (Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.2e-04
Identity = 40/139 (28.78%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 4   AVLIANSVGNILVERFHGVPAE--ERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIV 63
           A+++ ++ G  L   F+  P      L  +    KL  +  K   N EL +  +K   ++
Sbjct: 10  AIIVLDNNGKRLCSCFYDPPGTPITPLTEKDKFEKLIFEKCK-TSNCELEIIDNK--VVI 69

Query: 64  YTVLGDVAVYVVGKD-EYDELALAEVIFVITSSIKDACGKAP----TERLFLDKYGKICL 123
            +   DV ++VVG     +ELAL +V+  + S  K AC        T++ FL+ Y  I L
Sbjct: 70  GSKQSDVWIFVVGNSLNSNELALLDVLNTLISLFKKACATDESIMITKKTFLENYALIRL 129

Query: 124 CLDEIVWTGILENTEKDRI 136
            +DEIV  GI+   +++ I
Sbjct: 130 YIDEIVSDGIIFEVDEETI 145

[Close]

BLAST of Moc11g05470 vs. ExPASy TrEMBL
Match: A0A6J1BYX2 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPPTEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 147

[Close]

BLAST of Moc11g05470 vs. ExPASy TrEMBL
Match: A0A5D3E691 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007430 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Moc11g05470 vs. ExPASy TrEMBL
Match: A0A1S3CRC6 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Moc11g05470 vs. ExPASy TrEMBL
Match: A0A5A7TBS4 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003660 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Moc11g05470 vs. ExPASy TrEMBL
Match: A0A6J1IMX0 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111476670 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.2e-75
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGKAPTER FLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVVTSSIKDACGKAPTERSFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 148
           IVWTGILENTEKDRIKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Moc11g05470 vs. TAIR 10
Match: AT1G15370.1 (SNARE-like superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 4.4e-69
Identity = 119/146 (81.51%), Postives = 138/146 (94.52%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVYI
Sbjct: 1   MILAVLFANSVGNVLIERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYT+LGDV++++VGKDEYDELALAE I++IT+++KD CGK PTER+FLDKYG+ICLCLDE
Sbjct: 61  VYTMLGDVSIFLVGKDEYDELALAETIYIITAAVKDVCGKPPTERVFLDKYGRICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPTE 147
           IVW G+LENT+KDRIKRLIRLKPP+E
Sbjct: 121 IVWNGLLENTDKDRIKRLIRLKPPSE 146

The following BLAST results are available for this feature:

BLAST of Moc11g05470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134177.1	2.7e-76	100.00	uncharacterized protein LOC111006502 [Momordica charantia]	[more]
XP_008466411.1	2.2e-75	98.64	PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE...	[more]
KAA0038809.1	2.9e-75	97.96	SNARE-like superfamily protein [Cucumis melo var. makuwa]	[more]
XP_038896955.1	5.0e-75	97.96	TSET complex member tstD [Benincasa hispida]	[more]
XP_022936551.1	1.9e-74	97.28	uncharacterized protein LOC111443125 [Cucurbita moschata] >XP_022976214.1 unchar...	[more]

BLAST of Moc11g05470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0HLF1	3.5e-15	32.64	TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1	[more]
Q5NA06	2.5e-05	25.95	Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800...	[more]
Q54CA7	8.2e-04	28.78	Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb P...	[more]

BLAST of Moc11g05470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYX2	1.3e-76	100.00	Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1	[more]
A0A5D3E691	1.1e-75	98.64	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A1S3CRC6	1.1e-75	98.64	Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1	[more]
A0A5A7TBS4	1.4e-75	97.96	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92...	[more]
A0A6J1IMX0	9.2e-75	97.28	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111476670 PE=3 SV=1	[more]

BLAST of Moc11g05470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15370.1	4.4e-69	81.51	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..142 e-value: 1.5E-17 score: 65.8
None	No IPR available	PANTHER	PTHR11043:SF19	SUBFAMILY NOT NAMED	coord: 3..147
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..137 e-value: 3.4E-6 score: 27.1
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 3..147
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g05470.1	Moc11g05470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0030126	COPI vesicle coat
cellular_component	GO:0000139	Golgi membrane