Moc11g05380 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g05380
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ubiquitin-like domain-containing protein
Location	chr11: 3562175 .. 3564631 (-)
RNA-Seq Expression	Moc11g05380
Synteny	Moc11g05380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTCGACGGCGTTTGCAGACTCGACATTGGCGACTTTCCCGCTCCTCCTAGGGCATTATCGTCCCTCGCCAAGCGTCGCCGATCGTTTTCTCTGCTAATTTCCTCTCCTTTGATGATCGTTGGCCTCTCCAGGAAGAATGTTTCGTATCGACAGCTCCCTCATCAGCCTCTCCACCTCTCCGTTCTCAAGCTCGATGGCTCTTGTTTCGGTATGTTTACGTCTTTCACTGCTGCTACATTGCGCTGGATTGTATTAATTCCTAGGGATAATGGAGAAAGGAGGAGTCGGTTCGTTTTGGTTTTGATTGGTTTTGTTGTTTGTGCTAGTGCTAGGCGTTTTCATCTGCTTGTAAGTTAGTTTTATGTCTCGTTAATGGCAGAGGAATCTCTGGTTTAGGTTGAGGTTTGATTTGATACGATTTGATTTTGAGGATATTGAAGGTATCTAAATTGTTCTTCTGCTTTATCTAGTTCTTCGGAGGGGTTTTTCTTGGTTGGTGCCTTCTTTTGCTTGAAATACTATTACTTGACCACTGAAGTTGAAAAGGAATGAAGTCTTAAATTTGAAGAATAAGATTGCCTTCGTCACATTACACCCTCTTTCAATATAGGAAAACTTCAATGAATTGAGATGTTTGACACAGATATTCAGGTTAAGAAATCTGCCACTGTTGCTGAATTAAAGGGGGCAGTGGAGGCGGTTTTCAGTCACATGCCACAGGATGGACCAGGAAAAATTTCATGGTTGGTTCGTTGAACTTTTTGACCCATTTGATTGCCTTTAGCTTCTGTCATATTCTATCATGAACTTTCAGTTCCATATGTTTTATTTACCATTTACCAATACCATGCCAAAACTAAGAACACTATTTGGATGACTTGTTAAAAGATTGAAGGAGATGATTTATAAAATTATCTATCAGCTCTAAATTATAAACTTCTCAAGACCTTTTGCATTATTCTGAACAAGAAAATTTAAATCTGGATATCTCTTCACTGAGACAGTTTCTCACTGTTCTTGTTTGATTCATGGAGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTGAGAAGCTAGTTGATGATACGGACTACATTGCAAATTTCGGCATCAAGGATGGTGATCAGGTACTTAGCTAGCTGTAGAATTTATGTTGTCTTTTCTGTTGATAATCATTCTCTGCCTGATGATTTAAATTTCCTGTGATGTTTTGATTGGATTATGAGCTTTACCAACATGATGTAAATCAGAGCATTCGGTTAGCTGTTTTTCCTTGAAATTTTTGTTGCTAGATCCTTGCACGTCCTTCACTAGCTCCATCAATCTTTCTAGGGCATGAAAGTTTTGTGGACAGAACCTGAATTGGCTGAACTGTTTCCCCCTAAAATTCAGGACTTGAGAAAGAAGTCAAATTTTCTATTATTGGTGTTCACCTTAATTTCATTAAAAAGGAAAAAAATGATTACCCGTTCAACTTTGTCATGAATTGTTACTTTTTATTTATTTATTTATATAGCTAAATTAGTTGTGCTTTCTTCAGGTTAGTTGAATTGTTACAACTCTTGAGTTCTATTATTAGGTTTCCTTTTTAAGTGTGGAATTATTTTGTTGCTTATACTGGATTATCGATGCATTACTATGAATCTAGTTACAGTCAGGAATGTGGTTCCCAGATGTTAATGAAAGAAGAAAAAGAATTATAGATTTACACTACTTAATGCTTACGTTCTTATAAGAATTGCTTTGTTTTAACATGTTCAGCTTCAGTTCGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAACGAATACGTGGTTTCCTCAAAACTGCACAGTAGGTAAGAGACTCTTACCTCCTAAAAGATCTGCCTGTTGTATATCAGATGACTACCGGGACATGAAATATGGTATCGATGCAAAAAAGTTGAGAGGCGTTAAAAAGAATTTCAGAAATTTGAGGAGACAACAAATAACTTCCATCTTGAAAGTAATAGAATATGCTGTTAGAAATTTTGGGTATTATATAGGACTAACAAAGCATAGAGGATATTCGTTCCTTGAATGATTTATTCATCTTAATTTCTGTTCTGCTAATAATAGAATCCTGAACTCTCAGGACATCATCTCGATCGAAAAGCCACAAGCGAAACGATCAGGACAACTACAATGATATAGAGATGGGAAGGTTTCAACATCACAACAACGGTGAACTCTTCATGAGCCCCGAGCCAAAGATGGTCGTCTTTTTGGGAGGGTGGTTTTCACACACCAAGCTGGCATCTGCGGGAAGAATGAGCATCAATAGCCTGGTTCGTCCATCGGGATCTCGGCCTAGTCTGGTGCGTGGTTTTAAGAACTTAGTACAATTATGCCGTGAAAAACGCCATTATCAGAAAGTGAGTAAAAAGAAGAGGTCCATCATAGTAGTGTGA

mRNA sequence

ATGGCCGTCGACGGCGTTTGCAGACTCGACATTGGCGACTTTCCCGCTCCTCCTAGGGCATTATCGTCCCTCGCCAAGCGTCGCCGATCGTTTTCTCTGCTAATTTCCTCTCCTTTGATGATCGTTGGCCTCTCCAGGAAGAATGTTTCGTATCGACAGCTCCCTCATCAGCCTCTCCACCTCTCCGTTCTCAAGCTCGATGGCTCTTGTTTCGATATTCAGGTTAAGAAATCTGCCACTGTTGCTGAATTAAAGGGGGCAGTGGAGGCGGTTTTCAGTCACATGCCACAGGATGGACCAGGAAAAATTTCATGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTGAGAAGCTAGTTGATGATACGGACTACATTGCAAATTTCGGCATCAAGGATGGTGATCAGCTTCAGTTCGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAACGAATACGTGGTTTCCTCAAAACTGCACAGTAGGACATCATCTCGATCGAAAAGCCACAAGCGAAACGATCAGGACAACTACAATGATATAGAGATGGGAAGGTTTCAACATCACAACAACGGTGAACTCTTCATGAGCCCCGAGCCAAAGATGGTCGTCTTTTTGGGAGGGTGGTTTTCACACACCAAGCTGGCATCTGCGGGAAGAATGAGCATCAATAGCCTGGTTCGTCCATCGGGATCTCGGCCTAGTCTGGTGCGTGGTTTTAAGAACTTAGTACAATTATGCCGTGAAAAACGCCATTATCAGAAAGTGAGTAAAAAGAAGAGGTCCATCATAGTAGTGTGA

Coding sequence (CDS)

ATGGCCGTCGACGGCGTTTGCAGACTCGACATTGGCGACTTTCCCGCTCCTCCTAGGGCATTATCGTCCCTCGCCAAGCGTCGCCGATCGTTTTCTCTGCTAATTTCCTCTCCTTTGATGATCGTTGGCCTCTCCAGGAAGAATGTTTCGTATCGACAGCTCCCTCATCAGCCTCTCCACCTCTCCGTTCTCAAGCTCGATGGCTCTTGTTTCGATATTCAGGTTAAGAAATCTGCCACTGTTGCTGAATTAAAGGGGGCAGTGGAGGCGGTTTTCAGTCACATGCCACAGGATGGACCAGGAAAAATTTCATGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTGAGAAGCTAGTTGATGATACGGACTACATTGCAAATTTCGGCATCAAGGATGGTGATCAGCTTCAGTTCGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAACGAATACGTGGTTTCCTCAAAACTGCACAGTAGGACATCATCTCGATCGAAAAGCCACAAGCGAAACGATCAGGACAACTACAATGATATAGAGATGGGAAGGTTTCAACATCACAACAACGGTGAACTCTTCATGAGCCCCGAGCCAAAGATGGTCGTCTTTTTGGGAGGGTGGTTTTCACACACCAAGCTGGCATCTGCGGGAAGAATGAGCATCAATAGCCTGGTTCGTCCATCGGGATCTCGGCCTAGTCTGGTGCGTGGTTTTAAGAACTTAGTACAATTATGCCGTGAAAAACGCCATTATCAGAAAGTGAGTAAAAAGAAGAGGTCCATCATAGTAGTGTGA

Protein sequence

MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRNDQDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

Homology

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BLAST of Moc11g05380 vs. NCBI nr
Match: XP_022134606.1 (uncharacterized protein LOC111006831 [Momordica charantia])

HSP 1 Score: 550.1 bits (1416), Expect = 1.1e-152
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH
Sbjct: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK
Sbjct: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND
Sbjct: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180

Query: 181 QDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRP 240
           QDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRP
Sbjct: 181 QDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRP 240

Query: 241 SLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           SLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
Sbjct: 241 SLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 272

[Close]

BLAST of Moc11g05380 vs. NCBI nr
Match: XP_038899214.1 (uncharacterized protein LOC120086568 [Benincasa hispida])

HSP 1 Score: 445.7 bits (1145), Expect = 2.9e-121
Identity = 225/278 (80.94%), Postives = 247/278 (88.85%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDF-PAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPL 60
           MA+DGVC LD+ +F P PP   +++ K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL
Sbjct: 1   MAIDGVCTLDVVEFPPPPPPPPTTVEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPL 60

Query: 61  HLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGE 120
            LSVLKLDGSCFDIQVK+SATVAELKGAVE+VFSHMPQ+GPGKISWLHVWWHFCLCYAG+
Sbjct: 61  MLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWHFCLCYAGQ 120

Query: 121 KLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRN 180
           KLVDD DYIANFGIKDGDQLQFVRHVTTGYN IRKQS + VVSSKL SR S RSK++++N
Sbjct: 121 KLVDDADYIANFGIKDGDQLQFVRHVTTGYNAIRKQSKKCVVSSKLLSRISYRSKNYEQN 180

Query: 181 DQD-----NYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVR 240
           DQ+     NYNDIE GRFQHH N ELFM+ EPKMVVFLGGWFSHTKLASAG+  INSLVR
Sbjct: 181 DQEDMERYNYNDIESGRFQHHGNNELFMNHEPKMVVFLGGWFSHTKLASAGKTRINSLVR 240

Query: 241 PSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           PSG+RPSLVRGFKNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 PSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of Moc11g05380 vs. NCBI nr
Match: XP_004136480.1 (uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical protein Csa_001701 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 2.2e-116
Identity = 225/279 (80.65%), Postives = 243/279 (87.10%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVC LD+ DFP P ++ ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCALDVVDFP-PLQSTTTPEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGS FDIQV++SATVAELKGAVE VFSHMPQ GPGKISWLHVWWHFCLCYAG+K
Sbjct: 61  LSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           LVDD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS + VVSSKL SR SSRSKS K+ND
Sbjct: 121 LVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQND 180

Query: 181 QD-----NYNDIEMGRFQH--HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240
           Q      NYNDIE GR QH   NN +LFM+ EPKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QKDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           RPS +RPSLVRGFKNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of Moc11g05380 vs. NCBI nr
Match: KAA0038816.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 421.8 bits (1083), Expect = 4.5e-114
Identity = 218/279 (78.14%), Postives = 241/279 (86.38%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVC LD+ DFP PP + ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCTLDVVDFP-PPTSTTTAEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCY G+K
Sbjct: 61  LSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           L+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS +  VSSKL SR SSRSKS K+ND
Sbjct: 121 LIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQND 180

Query: 181 QDN-------YNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240
           Q +       YNDIE GR QH+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QKDMERYNYKYNDIESGRCQHNGNNDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           RPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Moc11g05380 vs. NCBI nr
Match: XP_008466420.1 (PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 421.4 bits (1082), Expect = 5.9e-114
Identity = 218/279 (78.14%), Postives = 241/279 (86.38%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVC LD+ DFP PP + ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCTLDVVDFP-PPTSTTTAEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCY G+K
Sbjct: 61  LSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           L+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS +  VSSKL SR SSRSKS K+ND
Sbjct: 121 LIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQND 180

Query: 181 QDN-------YNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240
           Q +       YNDIE GR QH+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QKDMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           RPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Moc11g05380 vs. ExPASy Swiss-Prot
Match: Q84WS8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.9e-12
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 59  LHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG--KISWLHVWWHFCLCY 118
           + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 119 AGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTS 171
             EKL+DD   + + GI++  Q+ F+ +V         +  ++ +   LH  +S
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYVMKKGRGRHSKRKKHRLFRSLHKTSS 165

[Close]

BLAST of Moc11g05380 vs. ExPASy Swiss-Prot
Match: Q9BV90 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-08
Identity = 31/90 (34.44%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 57  QPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFC 116
           Q + + V K+DG    + V +SATV +LK A++  +  + Q+  G    ISW +VW  + 
Sbjct: 39  QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQR-YVQLKQEREGGIQHISWSYVWRTYH 98

Query: 117 LCYAGEKLVDDTDYIANFGIKDGDQLQFVR 144
           L  AGEKL +D   + ++GI++ D++ F++
Sbjct: 99  LTSAGEKLTEDRKKLRDYGIRNRDEVSFIK 127

[Close]

BLAST of Moc11g05380 vs. ExPASy Swiss-Prot
Match: Q8VIK1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.6e-08
Identity = 30/90 (33.33%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 57  QPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFC 116
           Q + + V K+DG    + V ++ATV +LK A++  +  + Q+  G    ISW +VW  + 
Sbjct: 30  QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQR-YVQLKQEREGGVQHISWSYVWRTYH 89

Query: 117 LCYAGEKLVDDTDYIANFGIKDGDQLQFVR 144
           L  AGEKL +D   + ++GI++ D++ F++
Sbjct: 90  LTSAGEKLTEDRKKLRDYGIRNRDEVSFIK 118

[Close]

BLAST of Moc11g05380 vs. ExPASy Swiss-Prot
Match: Q3ZBQ4 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-08
Identity = 30/90 (33.33%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 57  QPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFC 116
           Q + + V K+DG    + V ++ATV +LK A++  +  + Q+  G    ISW +VW  + 
Sbjct: 30  QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQR-YVQLRQEREGGIQHISWSYVWRTYH 89

Query: 117 LCYAGEKLVDDTDYIANFGIKDGDQLQFVR 144
           L  AGEKL +D   + ++GI++ D++ F++
Sbjct: 90  LTSAGEKLTEDRKKLRDYGIRNRDEVSFIK 118

[Close]

BLAST of Moc11g05380 vs. ExPASy TrEMBL
Match: A0A6J1BY98 (uncharacterized protein LOC111006831 OS=Momordica charantia OX=3673 GN=LOC111006831 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.4e-153
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH
Sbjct: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK
Sbjct: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND
Sbjct: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180

Query: 181 QDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRP 240
           QDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRP
Sbjct: 181 QDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRP 240

Query: 241 SLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           SLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
Sbjct: 241 SLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 272

[Close]

BLAST of Moc11g05380 vs. ExPASy TrEMBL
Match: A0A0A0LH97 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877630 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 225/279 (80.65%), Postives = 243/279 (87.10%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVC LD+ DFP P ++ ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCALDVVDFP-PLQSTTTPEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGS FDIQV++SATVAELKGAVE VFSHMPQ GPGKISWLHVWWHFCLCYAG+K
Sbjct: 61  LSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           LVDD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS + VVSSKL SR SSRSKS K+ND
Sbjct: 121 LVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQND 180

Query: 181 QD-----NYNDIEMGRFQH--HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240
           Q      NYNDIE GR QH   NN +LFM+ EPKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QKDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           RPS +RPSLVRGFKNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of Moc11g05380 vs. ExPASy TrEMBL
Match: A0A5A7T9I3 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003750 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.2e-114
Identity = 218/279 (78.14%), Postives = 241/279 (86.38%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVC LD+ DFP PP + ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCTLDVVDFP-PPTSTTTAEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCY G+K
Sbjct: 61  LSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           L+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS +  VSSKL SR SSRSKS K+ND
Sbjct: 121 LIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQND 180

Query: 181 QDN-------YNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240
           Q +       YNDIE GR QH+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QKDMERYNYKYNDIESGRCQHNGNNDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           RPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Moc11g05380 vs. ExPASy TrEMBL
Match: A0A5D3E6G8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007520 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.9e-114
Identity = 218/279 (78.14%), Postives = 241/279 (86.38%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVC LD+ DFP PP + ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCTLDVVDFP-PPTSTTTAEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCY G+K
Sbjct: 61  LSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           L+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS +  VSSKL SR SSRSKS K+ND
Sbjct: 121 LIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQND 180

Query: 181 QDN-------YNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240
           Q +       YNDIE GR QH+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QKDMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           RPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Moc11g05380 vs. ExPASy TrEMBL
Match: A0A1S3CR65 (uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.9e-114
Identity = 218/279 (78.14%), Postives = 241/279 (86.38%), Query Frame = 0


Query: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60
           MAVDGVC LD+ DFP PP + ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCTLDVVDFP-PPTSTTTAEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120
           LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCY G+K
Sbjct: 61  LSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQK 120

Query: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180
           L+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS +  VSSKL SR SSRSKS K+ND
Sbjct: 121 LIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQND 180

Query: 181 QDN-------YNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240
           Q +       YNDIE GR QH+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QKDMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 273
           RPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Moc11g05380 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 8.5e-34
Identity = 75/155 (48.39%), Postives = 103/155 (66.45%), Query Frame = 0


Query: 28  RRSFSLLISSPLMIVGL-SRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKG 87
           RRS +  +S   +I GL  R++ +Y Q+P +P+ L+VLKLDGS F IQV K+ATV ELK 
Sbjct: 6   RRSLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVGELKM 65

Query: 88  AVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVT 147
           AVEA FSH+P  GPGKISW HVW  FCL Y  ++L+++++Y+  FGIKDGDQL+F+RH++
Sbjct: 66  AVEAAFSHLPISGPGKISWPHVWGQFCLSYEDKRLINESEYLTEFGIKDGDQLRFIRHIS 125

Query: 148 T--GYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRN 180
                 V  K     V S K     S+  ++ K+N
Sbjct: 126 NYCMLMVKHKSKTPRVSSFKQLKLFSTTPETRKKN 160

[Close]

BLAST of Moc11g05380 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 8.5e-34
Identity = 72/151 (47.68%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 46  RKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISW 105
           R+  SY +LP++P+ LSVLKLDGS FD+ V  SATV +LK A+E  FSH+P+ GP KISW
Sbjct: 6   RRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKISW 65

Query: 106 LHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHV------TTGYNVIRKQSNEY 165
            HVW HFCLC+ G+KL+ DTD I N+G+KDGD+++F  HV      + GY+   KQ N  
Sbjct: 66  SHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAVLSKGYSRKSKQKNLE 125

Query: 166 VVSSKLHSRTSSRSKSHKRNDQDNYNDIEMG 191
            V  K      +R +       D+++D+E G
Sbjct: 126 RVLPKDGDEVLNRIE----EIDDSWDDLERG 152

[Close]

BLAST of Moc11g05380 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-27
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = 0


Query: 54  LPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFC 113
           +P +P+ L+VLKLDGS F   V K+ATV ELK AVEA FSH+P  GPGKISW HVW  FC
Sbjct: 1   MPEEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFC 60

Query: 114 LCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTT--GYNVIRKQSNEYVVSSKLHSRTSS 173
           L Y  ++L+++++Y+  FGIKDGDQL+F+RH++      V  K     V S K     S+
Sbjct: 61  LSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSKTPRVSSFKQLKLFST 120

Query: 174 RSKSHKRN 180
             ++ K+N
Sbjct: 121 TPETRKKN 125

[Close]

BLAST of Moc11g05380 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-26
Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = 0


Query: 44  LSRKNVSYRQLPHQ-PLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGK 103
           +S +  SY +LP Q  + LSV+KL+GS FD++V K  +VAELK AVE VF+  P +G G 
Sbjct: 37  ISGRRSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGM 96

Query: 104 ISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVS 163
           ISW HVW HFCLCY  ++LV+D   I   G+ DGDQL FVRH++  ++ + K+S      
Sbjct: 97  ISWSHVWGHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLSIDHSPMNKRSKSPSCK 156

Query: 164 SKLHSRTSSRSKSHKRNDQDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLA 223
             L    SS     +  +Q+     ++    +    +   + E ++V  + GW     L 
Sbjct: 157 RYLELDVSSIVNEIQIQNQNQNGVDDVAEKCYPGAQDELPAAESRLVNLIKGW-----LP 216

Query: 224 SAGRMSINSLVRPSGSRPS 242
            AGR  ++       S PS
Sbjct: 217 YAGRWGVSRKGPECRSGPS 230

[Close]

BLAST of Moc11g05380 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-13
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 59  LHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG--KISWLHVWWHFCLCY 118
           + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 119 AGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTS 171
             EKL+DD   + + GI++  Q+ F+ +V         +  ++ +   LH  +S
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYVMKKGRGRHSKRKKHRLFRSLHKTSS 165

The following BLAST results are available for this feature:

BLAST of Moc11g05380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134606.1	1.1e-152	100.00	uncharacterized protein LOC111006831 [Momordica charantia]	[more]
XP_038899214.1	2.9e-121	80.94	uncharacterized protein LOC120086568 [Benincasa hispida]	[more]
XP_004136480.1	2.2e-116	80.65	uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical ...	[more]
KAA0038816.1	4.5e-114	78.14	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. m...	[more]
XP_008466420.1	5.9e-114	78.14	PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U...	[more]

BLAST of Moc11g05380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WS8	8.9e-12	35.09	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana O...	[more]
Q9BV90	2.0e-08	34.44	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 G...	[more]
Q8VIK1	4.6e-08	33.33	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 ...	[more]
Q3ZBQ4	6.0e-08	33.33	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=...	[more]

BLAST of Moc11g05380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BY98	5.4e-153	100.00	uncharacterized protein LOC111006831 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0LH97	1.1e-116	80.65	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877...	[more]
A0A5A7T9I3	2.2e-114	78.14	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A5D3E6G8	2.9e-114	78.14	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A1S3CR65	2.9e-114	78.14	uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=...	[more]

BLAST of Moc11g05380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32270.1	8.5e-34	48.39	Ubiquitin-like superfamily protein	[more]
AT5G25340.1	8.5e-34	47.68	Ubiquitin-like superfamily protein	[more]
AT4G32270.2	1.2e-27	49.22	Ubiquitin-like superfamily protein	[more]
AT1G80060.1	1.7e-26	36.68	Ubiquitin-like superfamily protein	[more]
AT3G07860.1	6.3e-13	35.09	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 55..150 e-value: 1.3E-34 score: 120.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..185
None	No IPR available	PANTHER	PTHR14942:SF2	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 22..263
IPR040610	SNRNP25, ubiquitin-like domain	PFAM	PF18036	Ubiquitin_4	coord: 59..145 e-value: 6.5E-26 score: 90.2
IPR040610	SNRNP25, ubiquitin-like domain	CDD	cd17058	Ubl_SNRNP25	coord: 59..144 e-value: 2.04972E-33 score: 115.308
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein	PANTHER	PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	coord: 22..263
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 59..148 score: 9.068664
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 55..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g05380.1	Moc11g05380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex
molecular_function	GO:0005515	protein binding