Moc11g05250 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g05250
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	TPD1 protein-like 1
Location	chr11: 3475338 .. 3482132 (-)
RNA-Seq Expression	Moc11g05250
Synteny	Moc11g05250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCTTCTGCAACAAAACCTTGTAAGAATCAATATCTTTCCCAACCTTTTATTTTCATTGCTTATAGACTGTTTTTTTTTTATAAGAAACCAAACTTTTCATTGAGAAGAATGAAAACAAAACAGAAATACAAGGGCATACAAAAAATACAGTCCCGAAAAAGGAAGGCAGCCTAGAGAAAGGGCTTCCAATCCAAAAGAATATGACCTAACTGATAATTACAGAATAAATTTGAAACGGACCCCATAAAGAGACATTAAACCTTACGAGGTCCCAAACAAACTCCCACTCTCTTTCCACCCCCTAAAGATTCTATTGTTTCTTTCCCCCACATACCCCACAAAATCCCAAAGAACCCCGCCCGCCGAAGGAAACTCCCTTTCTCGCAAAAGGGAGAGTAGAGCAACACTTCCTCCACCATCGACACCCACTCTCTATGACGAGCCCAAGAAATTTCAAATATCTCAAAGAAATTGCTTATAGAATGTTTTGAGAATGAGTTGAATGTGAGATAATCACATTTGGAAAGTTGATTGTGGAGAGATTCTGTAATAATTACTTAGCAATTTTGTTTGATTCCCTTTAAATGAGTAGACAATTAACAGAATACATGATTTGTACCTCTGGCATTTTCTATTCTTTCTGCCATTTCCAAAATATCATTTAATAAGTTTTCCATAAACAGGACTACAATTCCCAAACTCATTTCACATCAAAAACAGAACTTTTCTTCTCTCGAGTATAAAAGGAAAAGTTCCAAGAATAAATTACTTTGGCAATTTTCTTTGATTTGAAATCGCCCTTTCAAAGGAATACAATAAACAAAATACCCGATTTGTAACCGTTGCATTTTTTGCAACTTCTGCCATTTCAAAAAACCATTCTAAAAAATTTTCTTATAAATAGGACTACACTACACCCTCTAAACTCACATCACATCAAACCAAAATCTCAACTCCTCTGAGTAGAAACAGGTTGAAAATGGCAGTCTCCATGAAGCTTTTCTGTGTGCTTGTTCTCTTCTCTCTCCTCTACAAAGGTATATATGATGGAAACTCATCTTTTCATCATGTTTGAAAGCAAACCCATTTGACAAAACTGAGCCTTAACCATTGTTTTTGTTGGATTGAATGATTTTCAGGTAATTGCCAATGCTCTTTGGATGACATTAAAGTCAGGCAAACTGCCACTGGATCCAAAGTGCTGGGAAAACAAGAATGGAGAGTTACAATCTCAAACGAATGTGCTGCTTGTTCCCAGATGGCTATAACGGTGGATTGCAATGGATATAAGACAGTAAAGGATGTTAATCCAAAAATCTTATACCCTCAAGGGAATGTGTGTATGGTGAATACTGGTTGGCCAGTCCGCAAATCAAATCCCATTTCCTTCACTTATGCTTGGGATAATCCCTTCCCTTTTAAGCCCGTTTCCTCCACAACTTACTGTGGTTATTAATTTCTCTCTCTCTCTCTGCGATTTACAGATAAAAGAAGAACTCAGCTGGTTGTATTGGTTTCTGAGGTTTATGATATGAATTAAATAAAGATATGAATGTTTTGCATGCATAACATGCTCCGAGTATTGTTCAAATTTTCTCTGTTATCGACTCGCTCTCATTTGCGTAATTGATTTTCAAGTAATTGAGTGGAGACAAGACTTTCCTTTGGCCAATTCTGACCACAAAAATATGACAATTGATTCTGGTGAACGACCTATTAGACAATATTTTAATTTTGTGTCTGGTGGGTTTATTAGTTTTCGAAAAAAAAATTCTAAAAAGTCCGCAGCGAAGTTTTAGATACAAAGTTAAAAGGTTCGGGGAATTACTAAACACTTTTTAAATAAAATTCTCTTCAAAGTTTGAGGAGTAAACTTATAATTTTAACTAATTTTAGAAGGACTTTTACCTTAAGGTTTTGTATGGCCTTAAAACTCTTATACTAACCCTTGAGAAAGTATTTTAAAAGGCATTGTTTTCCTTTCCTAAACGATCGTTTTCCTTAAATAACTAAATAAATATGGTAGAAAATAGTGGATCTATGACCATAAATTGTTATAAATACTTTTGTAAAAGATTTGCTCATAATAATTAATCTATATCTTTACTATATTAAAATGGGAGGATCTCGGAAAAATATTTTTTTGTACGTTCTTGTCCCTTCCTTAATTTATTAATTTACAAATTATGTCATTAATAATTTATTATAATTATTGATTATTAATTATCAATAATAATAAATGTACATGATCTAAACAATGTTACAAAAAGTTTTCACCATAAAATCAAATTATTTTCTTTAATTACAATTCATAATAGAATTACAAATATTTTGTAACGTTTTATCTCCTACTACCCTAAAAACATACTTTCTTTCACTATTTTTTCACAACACTTAATTCTCTCCAAACATTACTCTCAAATATTATTTAATCTAAAAATAATATATTCATCAAGTTTTAGAGAATACCTGTGTCGAATCTATATCTTGAATCTGAGGCTTGCAAAATTATTGTTCCATAATTTATGAGGTAAAATAATAGTGATTGTTAAGTATCAACATATTTTAGATTAGTGTATAGCTAAAGTTTGATTTTTTTTTATTCTTTTGTTACTATTGTTTTGTATTGTTCTTTTATAATTAATGTTTCATGTATTTAAAATGTTTTTTTAGAAAATAATAATAATGTATTAATCTATTACAAGCTCATGTTGATTTTGTTGAAAAAAAATTGCGTAAGGACATAAAAAAGTTTTAATTAATTGTAAATAGTAAATTAATTATGAACAATAACTTGTATGAAATCTAAAAAGTTTGGAATATATAACTTTTTGTCTCTTCCTTTTCTAATAATATAATATAATTTAAAGGTTTTTTTTTAATAATTTTAATTATAATATGAAGTTAAATTAGTAAAACTAAAGTGTTTAATATACAACAAAATGCTAGCTTGAAATTTTTTTAGAATTTCTAATAAACAAACAAAATATTTTTTAAAAAGAATGTGCCAAAATTAGATAAAATAACATTGTTAAAATGAAAAATTAAAGTAATTATACGTTTTTCAATCAATATATTAAAAAATATGAAATGTAACCTAAAATTAATTAAAAATAAGAGGTACGAAATAATACATTTTAAATACACTCATAGATTAAATGATTAAATTAGTAAAGTACATATATCTCAATGAAGTTTGTATATATACATCTTAATTTTCTTTATTTATTTATTATTATTATTATTTTGCTATTAGTGATATTTGTTTTTCTCATTTATTTATGTTATTATAAAATTAAGTTAAATAGAAAATATTAGCGTATTTGTACTTGGTATCAAACTAGTATATACAAAGATAAACATAAACATGCCTAAATAATAAAGGCGTATAACTTCCTTTTTTGAGGTCGATGTTCAAATCACCTTTTACTTTCATTTCTTATGAGTTAAATCTTGAGATAATCACATTTGGAAAGTTGATTGTGAAGTAATAAAATTATGTAATAACTAGTTGGCAATTTTTGGTTTTATTTGAAATTAGTCTTTAAATGGAAACACAATAAAAAAATATACCTGAAATTTGTCATTCCCAAACACCATTCCACAAAATTTTCCAATAAATAGGACTACACTACTTCCTCCAAACTCACTTCACATCAAACAAAAAACACAACCTGTTAATTCTCTGAGTAGAAAAGAAAAGAAAAGAAAAGAAGGGTTGAAAATGGCAGTCCCCATGAAGCTTTTTTGTGTACTAATTCTCTTTTCTCTCCTCTACAAAGGTACATACATATACGAGTAACTCGTAGGTTTTTCCTTTTTATTTTTATTTTTAAGTACAACGTTTGGGGTGGGAGATTCGAACTCCCGCCGAACTATGTTCAAGTTGACTAGAAACCCACGATGTGTTTCTCTTTTCTTTTTTAGTACAATATCTGAGGCAGGGGATTCAAACTGACTTTTTGATCATACATAAATGCCTTAACATATTGAGTTATACTCAGGCTGACTAGGAATTCATGATGTTTCTATTTTCTTGTTGAGTACAATATCTGGGGTAGGAGATTCGAACTCACGACATTCTAATCCACCATGTTTTGATCGTATATATTATTTGGAAGTAAATGGACCAAACTCATAATCGTTTTTTTTTTTTACGTTTTGAGTACCATATCCAGGGTGGGAGATTCAAACTGATCACAACCTTCTAGTCGTACACAGGTGTCTTAAGCACTGACTGGAAACTTAGGACGGAATTGACCCATATGATTTTGGAATTTCAGGTAATTGCCAATGCTCTGTGGGTAACATAAAAGTGAGCCAAAGCCCGACAGGATCCCAAGTGCTGGGAAAGACACAATGGAGAGTTACAATCTCAAACAACTGTGGTTGTTCACAGCTAAGCATATTGTTGGATTGCGTTGGATATCAGACAGTGGAGAATGTTGATCCAGCAATACTGAACAGTGCTGCCAATGTTTGTCTGTTTAACAGTGGAAGGCCACTCCTCAAATCAGCCCCCATTTCCTTCACTTATGCTTGGGATAATCCCTACCCTTTCACCCCCCTCTCCTCCACAACTTACTGTGGTTAATTTTACTATTTACCTATTTACTACTTCCATCTCTATCTATTTCTTCACAATCACAACACAGTTTAATTACTAATTTCTACTGCTTTTTTATATGAATTAAATATATATGCACCTTCAGTGTTACTTCCAATTGTCTCTATTTACCTATTCTCGCGCTGTCTGGACATGTATTATATATAAACACTCAATCTTCTTGCTAAAAAAAAGTTCCCTTAGTATTGGGTATCATAATAAATTGGGAGGAAACAATTAGGATTCGAACACAAAACCTCCCGCTCTGATACCATCTTAAAGATGAATAAACCATCATTCAATCCAAAAGCTTAAACTTGTGGATTGGGTAAATTTAATTCATATATTGTATATCTTACCATATTTGATCAAAATACTTGACCTATAATAGAATTAGGAGAAGAAAACCAAAATGATCATTTAACCCGTTTATATATATATATATATATATATATATATATATATATTTATATATATTTATTAACATTTTCTTTAGAGAATATACTATACAAGTGATAAGTTGTTAATTATAAGTTAAATAAAAAAAAATCTAAATGAACATTTCATTGATGGATATTAATAGCAAGAACTAAATAGAAAAATGAACCATGAACCTTTAGATACAATTCAAAAATTTGAGACCAAATCTATAGCCATAGGTAAGCTATTAAATATTTTTTATCGACATTTTCATATATTCATAAGTTTGACAACGACATGAGGTGAATTATTGACATTTTCATACAGTATTGTAAAAAATATCAATAAAATATCACTAATATAGACGTCAGGTTAATATTAATCATTTTTAACTTATTTTAAAATGGTAAAGTTTTTATTTGTTAAGAATTTTTTATTATTTATAAATGTCTATTGAAGGCTTCGACATTTAAAATTTTGCTGTATGTAACCGGTAATGTGTGTCTCTTAAGAAGGAAAGTGATTAATGACTTCCCAAAAGAATTGATTCAATTAAATTACTTGGCAATTTTGCTTACCACCTCTCGTGGAAAGGTTTTAAATAAAAGTTATTGATTTTTTTTAAGTACAATACGTACGTGCGGTGAGAATCGAACTCACAAATTCTCGCTTTGAAGTATATATCAATTACCGCTGAGCTATGCTCGCTTTGACAAATAAAAATTGTTGATTTATGCTCTTTTTTTTCTTTTTCTTTTTTGTGCATTAATTATATCCCTCAAAATGGTCTCTATAAATAAGACCACACTTTCCAACTTTATTTCTATCCACAAAACACAACTTATTATTCCATAAACCACAAAAATGTTTGCCTCAATCAAGCTTTTCTCTCTACTCTTCTTCTTTTCTCTCCTTTCCAAAGGTACATATAGTTTTATAAAACATGTTCTTTGCTCTTCATTTTTGCCTCTAAATTTTAAAATACTTTGTTTTAGCTTTTACGTTCAAAGTTAACATTTATTACCTACTACGACGGGTGTCTACGATCAACATTTACTTATCGAGAGTAATTAAGAAATGAACAGAAGACAAGACATGTTAGTTACACCCACACGTTTGAGTTCTATAAAGCTACCTTTCTCTCCTGATGGATTTACTTTAAAAATCAACAAGAGAGACAAAACTAAAGGTGTGTTTGGGGAGTGATTTTGGTTTACTTTTGCCATTGTCAAAATCATTTTACTTTCTAGTAATCATGTTTGGCAAATTAAAATTTTGATTTTAGGAAAATCAATTATACTTAAATCTCTTTTTTTTTTACAAAATTGAAGCACTAAAACAAAACATCTGAAAGCTATTCAGGGGATCGAACTAAACTAGCTAGCATGTTACGTTTTGTAACCCGTCTTGTTGTACTGTATTTTGAAAGTTTTGTTTCGGATGATTTTGCAGGCAATTGCCAATGCTCATTGGGTGACATTACAATCAGGCAAAACACAACTGGAAGTGAAGTTGAAGGGAAGCAAGAATGGAGAGCCACAATCACAAACAATTGTGTTTGTTCTCAATACAGTGTGAAGTTTGATTGCAATGGATTTAATACAGTGGAGGATGTTGATTCCTCCATTTTAATGGTTTTTGGGTCTGTTTGTTTGGTTAATAATGGTGAACCAATCTTCAAACCAAAACCCATCTCCTTCACTTATGCTTGGGACAATGCCTTCCCTTTCAAGCCCCTCTTCTCTCAAGTTTCTTGTTCTTAA

mRNA sequence

ATGATTTCTTCTGCAACAAAACCTTGTAATTGCCAATGCTCTTTGGATGACATTAAAGTCAGGCAAACTGCCACTGGATCCAAAGTGCTGGGAAAACAAGAATGGAGAGTTACAATCTCAAACGAATGTGCTGCTTGTTCCCAGATGGCTATAACGGTGGATTGCAATGGATATAAGACAGTAAAGGATGTTAATCCAAAAATCTTATACCCTCAAGGGAATGTGTGTATGGTGAATACTGGTTGGCCAGTCCGCAAATCAAATCCCATTTCCTTCACTTATGCTTGGGATAATCCCTTCCCTTTTAAGCCCGTTTCCTCCACAACTTACTGTGGTGTCTTAAGCACTGACTGGAAACTTAGGACGGAATTGACCCATATGATTTTGGAATTTCAGCTAAGCATATTGTTGGATTGCGTTGGATATCAGACAGTGGAGAATGTTGATCCAGCAATACTGAACAGTGCTGCCAATGTTTGTCTGTTTAACAGTGGAAGGCCACTCCTCAAATCAGCCCCCATTTCCTTCACTTATGCTTGGGATAATCCCTACCCTTTCACCCCCCTCTCCTCCACAACTTACTGTGGCAATTGCCAATGCTCATTGGGTGACATTACAATCAGGCAAAACACAACTGGAAGTGAAGTTGAAGGGAAGCAAGAATGGAGAGCCACAATCACAAACAATTGTGTTTGTTCTCAATACAGTGTGAAGTTTGATTGCAATGGATTTAATACAGTGGAGGATGTTGATTCCTCCATTTTAATGGTTTTTGGGTCTGTTTGTTTGGTTAATAATGGTGAACCAATCTTCAAACCAAAACCCATCTCCTTCACTTATGCTTGGGACAATGCCTTCCCTTTCAAGCCCCTCTTCTCTCAAGTTTCTTGTTCTTAA

Coding sequence (CDS)

ATGATTTCTTCTGCAACAAAACCTTGTAATTGCCAATGCTCTTTGGATGACATTAAAGTCAGGCAAACTGCCACTGGATCCAAAGTGCTGGGAAAACAAGAATGGAGAGTTACAATCTCAAACGAATGTGCTGCTTGTTCCCAGATGGCTATAACGGTGGATTGCAATGGATATAAGACAGTAAAGGATGTTAATCCAAAAATCTTATACCCTCAAGGGAATGTGTGTATGGTGAATACTGGTTGGCCAGTCCGCAAATCAAATCCCATTTCCTTCACTTATGCTTGGGATAATCCCTTCCCTTTTAAGCCCGTTTCCTCCACAACTTACTGTGGTGTCTTAAGCACTGACTGGAAACTTAGGACGGAATTGACCCATATGATTTTGGAATTTCAGCTAAGCATATTGTTGGATTGCGTTGGATATCAGACAGTGGAGAATGTTGATCCAGCAATACTGAACAGTGCTGCCAATGTTTGTCTGTTTAACAGTGGAAGGCCACTCCTCAAATCAGCCCCCATTTCCTTCACTTATGCTTGGGATAATCCCTACCCTTTCACCCCCCTCTCCTCCACAACTTACTGTGGCAATTGCCAATGCTCATTGGGTGACATTACAATCAGGCAAAACACAACTGGAAGTGAAGTTGAAGGGAAGCAAGAATGGAGAGCCACAATCACAAACAATTGTGTTTGTTCTCAATACAGTGTGAAGTTTGATTGCAATGGATTTAATACAGTGGAGGATGTTGATTCCTCCATTTTAATGGTTTTTGGGTCTGTTTGTTTGGTTAATAATGGTGAACCAATCTTCAAACCAAAACCCATCTCCTTCACTTATGCTTGGGACAATGCCTTCCCTTTCAAGCCCCTCTTCTCTCAAGTTTCTTGTTCTTAA

Protein sequence

MISSATKPCNCQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGYKTVKDVNPKILYPQGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYCGVLSTDWKLRTELTHMILEFQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTTYCGNCQCSLGDITIRQNTTGSEVEGKQEWRATITNNCVCSQYSVKFDCNGFNTVEDVDSSILMVFGSVCLVNNGEPIFKPKPISFTYAWDNAFPFKPLFSQVSCS

Homology

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BLAST of Moc11g05250 vs. NCBI nr
Match: KGN60075.1 (hypothetical protein Csa_001952 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 7.9e-43
Identity = 84/103 (81.55%), Postives = 89/103 (86.41%), Query Frame = 0


Query: 196 GNCQCSLGDITIRQNTTGSEVEGKQEWRATITNNCVCSQYSVKFDCNGFNTVEDVDSSIL 255
           GNC+CS+ DI I Q+TTG EV GKQEWRATI N CVCSQYSVKFDCNGFNTVE VD SIL
Sbjct: 20  GNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESIL 79

Query: 256 MVFGSVCLVNNGEPIFKPKPISFTYAWDNAFPFKPLFSQVSCS 299
           MV GSVCLVNNG+PIF   PISFTYAWDNAFPF PLFSQV+CS
Sbjct: 80  MVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVACS 122

[Close]

BLAST of Moc11g05250 vs. NCBI nr
Match: XP_038896903.1 (TPD1 protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-42
Identity = 84/103 (81.55%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 196 GNCQCSLGDITIRQNTTGSEVEGKQEWRATITNNCVCSQYSVKFDCNGFNTVEDVDSSIL 255
           G  QCS+ DITI Q+TTG EV GKQEWRATITNNCVCSQYSVKFDCNGFN+VE VD SIL
Sbjct: 20  GKSQCSMNDITISQSTTGKEVNGKQEWRATITNNCVCSQYSVKFDCNGFNSVEKVDESIL 79

Query: 256 MVFGSVCLVNNGEPIFKPKPISFTYAWDNAFPFKPLFSQVSCS 299
           MV GS CLVNNG+P+FK  PISFTYAWDNAF FKPLFSQV+CS
Sbjct: 80  MVAGSECLVNNGQPMFKSNPISFTYAWDNAFSFKPLFSQVACS 122

[Close]

BLAST of Moc11g05250 vs. NCBI nr
Match: XP_022137447.1 (uncharacterized protein LOC111008881 isoform X2 [Momordica charantia])

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-33
Identity = 91/187 (48.66%), Postives = 96/187 (51.34%), Query Frame = 0


Query: 10  NCQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGYKTVKDVNPKIL 69
           NCQCS+ +IKV Q+ TGS+VLGK +WRVTISN C  CS                      
Sbjct: 21  NCQCSVGNIKVSQSPTGSQVLGKTQWRVTISNNC-GCS---------------------- 80

Query: 70  YPQGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYCGVLSTDWKLRTELTHMIL 129
                                                                       
Sbjct: 81  ------------------------------------------------------------ 122

Query: 130 EFQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL 189
             QLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL
Sbjct: 141 --QLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL 122

Query: 190 SSTTYCG 197
           SSTTYCG
Sbjct: 201 SSTTYCG 122

[Close]

BLAST of Moc11g05250 vs. NCBI nr
Match: XP_022137438.1 (uncharacterized protein LOC111008881 isoform X1 [Momordica charantia])

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-33
Identity = 91/187 (48.66%), Postives = 96/187 (51.34%), Query Frame = 0


Query: 10  NCQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGYKTVKDVNPKIL 69
           NCQCS+ +IKV Q+ TGS+VLGK +WRVTISN C  CS                      
Sbjct: 21  NCQCSVGNIKVSQSPTGSQVLGKTQWRVTISNNC-GCS---------------------- 80

Query: 70  YPQGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYCGVLSTDWKLRTELTHMIL 129
                                                                       
Sbjct: 81  ------------------------------------------------------------ 122

Query: 130 EFQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL 189
             QLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL
Sbjct: 141 --QLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL 122

Query: 190 SSTTYCG 197
           SSTTYCG
Sbjct: 201 SSTTYCG 122

[Close]

BLAST of Moc11g05250 vs. NCBI nr
Match: XP_022141896.1 (uncharacterized protein At1g05835-like [Momordica charantia])

HSP 1 Score: 150.2 bits (378), Expect = 2.8e-32
Identity = 68/103 (66.02%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 196 GNCQCSLGDITIRQNTTGSEVEGKQEWRATITNNCVCSQYSVKFDCNGFNTVEDVDSSIL 255
           GNCQCSLGDI+I+Q  T   V G+QEW  T++NNCVCSQY+VK DC GF++ E VDSS L
Sbjct: 20  GNCQCSLGDISIKQEATEKRVGGQQEWLVTVSNNCVCSQYNVKLDCTGFSSEEIVDSSKL 79

Query: 256 MVFGSVCLVNNGEPIFKPKPISFTYAWDNAFPFKPLFSQVSCS 299
              G+ CL+N G PIFK  PISFTYAWD  FPFKPL SQV+CS
Sbjct: 80  TNTGNECLINGGRPIFKSDPISFTYAWDLIFPFKPLSSQVACS 122

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BLAST of Moc11g05250 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05
Identity = 33/111 (29.73%), Postives = 50/111 (45.05%), Query Frame = 0


Query: 2   ISSATKPCNCQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAA-CSQMAITVDCNGYKT 61
           I   T      CS DDI + Q +T     G   + V I N C + C+   I V C  + +
Sbjct: 69  IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSS 128

Query: 62  VKDVNPKILYP-QGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTY 111
           V+ VNP++      + C+VN G P+     +SF YA    +P    S + +
Sbjct: 129 VRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSCF 179

[Close]

BLAST of Moc11g05250 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 9.7e-04
Identity = 27/103 (26.21%), Postives = 48/103 (46.60%), Query Frame = 0


Query: 11  CQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGY--KTVKDVNPKI 70
           C+    +  VRQT    K    +++RV + N+C  C  + + + C G+    V     ++
Sbjct: 26  CEGKSSEPAVRQTQV--KWREGKKFRVEVMNKCPMCPIINLRLKCQGFPQSLVDPTFLRV 85

Query: 71  LYPQGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYC 112
           L      C+VN G P+     +SF Y+  + F  +P+S +  C
Sbjct: 86  LSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQC 126

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BLAST of Moc11g05250 vs. ExPASy TrEMBL
Match: A0A0A0LDN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.8e-43
Identity = 84/103 (81.55%), Postives = 89/103 (86.41%), Query Frame = 0


Query: 196 GNCQCSLGDITIRQNTTGSEVEGKQEWRATITNNCVCSQYSVKFDCNGFNTVEDVDSSIL 255
           GNC+CS+ DI I Q+TTG EV GKQEWRATI N CVCSQYSVKFDCNGFNTVE VD SIL
Sbjct: 20  GNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESIL 79

Query: 256 MVFGSVCLVNNGEPIFKPKPISFTYAWDNAFPFKPLFSQVSCS 299
           MV GSVCLVNNG+PIF   PISFTYAWDNAFPF PLFSQV+CS
Sbjct: 80  MVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVACS 122

[Close]

BLAST of Moc11g05250 vs. ExPASy TrEMBL
Match: A0A0A0LEA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-36
Identity = 75/103 (72.82%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 196 GNCQCSLGDITIRQNTTGSEVEGKQEWRATITNNCVCSQYSVKFDCNGFNTVEDVDSSIL 255
           GNC+C L DI I Q TTGS V+GKQ W+ATITNNC+C Q S+K DCNGFNTV+ VD SIL
Sbjct: 20  GNCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSSLKLDCNGFNTVQAVDPSIL 79

Query: 256 MVFGSVCLVNNGEPIFKPKPISFTYAWDNAFPFKPLFSQVSCS 299
            V GSVCLVN G+PIF+  PISFTYA DNAFPFKPL SQ+SCS
Sbjct: 80  AVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQISCS 122

[Close]

BLAST of Moc11g05250 vs. ExPASy TrEMBL
Match: A0A6J1CAC8 (uncharacterized protein LOC111008881 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008881 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.5e-34
Identity = 91/187 (48.66%), Postives = 96/187 (51.34%), Query Frame = 0


Query: 10  NCQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGYKTVKDVNPKIL 69
           NCQCS+ +IKV Q+ TGS+VLGK +WRVTISN C  CS                      
Sbjct: 21  NCQCSVGNIKVSQSPTGSQVLGKTQWRVTISNNC-GCS---------------------- 80

Query: 70  YPQGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYCGVLSTDWKLRTELTHMIL 129
                                                                       
Sbjct: 81  ------------------------------------------------------------ 122

Query: 130 EFQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL 189
             QLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL
Sbjct: 141 --QLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL 122

Query: 190 SSTTYCG 197
           SSTTYCG
Sbjct: 201 SSTTYCG 122

[Close]

BLAST of Moc11g05250 vs. ExPASy TrEMBL
Match: A0A6J1C8A1 (uncharacterized protein LOC111008881 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008881 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.5e-34
Identity = 91/187 (48.66%), Postives = 96/187 (51.34%), Query Frame = 0


Query: 10  NCQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGYKTVKDVNPKIL 69
           NCQCS+ +IKV Q+ TGS+VLGK +WRVTISN C  CS                      
Sbjct: 21  NCQCSVGNIKVSQSPTGSQVLGKTQWRVTISNNC-GCS---------------------- 80

Query: 70  YPQGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYCGVLSTDWKLRTELTHMIL 129
                                                                       
Sbjct: 81  ------------------------------------------------------------ 122

Query: 130 EFQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL 189
             QLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL
Sbjct: 141 --QLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPL 122

Query: 190 SSTTYCG 197
           SSTTYCG
Sbjct: 201 SSTTYCG 122

[Close]

BLAST of Moc11g05250 vs. ExPASy TrEMBL
Match: A0A6J1CKK7 (uncharacterized protein At1g05835-like OS=Momordica charantia OX=3673 GN=LOC111012144 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-32
Identity = 68/103 (66.02%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 196 GNCQCSLGDITIRQNTTGSEVEGKQEWRATITNNCVCSQYSVKFDCNGFNTVEDVDSSIL 255
           GNCQCSLGDI+I+Q  T   V G+QEW  T++NNCVCSQY+VK DC GF++ E VDSS L
Sbjct: 20  GNCQCSLGDISIKQEATEKRVGGQQEWLVTVSNNCVCSQYNVKLDCTGFSSEEIVDSSKL 79

Query: 256 MVFGSVCLVNNGEPIFKPKPISFTYAWDNAFPFKPLFSQVSCS 299
              G+ CL+N G PIFK  PISFTYAWD  FPFKPL SQV+CS
Sbjct: 80  TNTGNECLINGGRPIFKSDPISFTYAWDLIFPFKPLSSQVACS 122

[Close]

BLAST of Moc11g05250 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 32/99 (32.32%), Postives = 48/99 (48.48%), Query Frame = 0


Query: 13  CSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGYKTVKDVNPKILYPQ 72
           CSL+ + V+Q+ TG  V  K EW V ++N C  C      + C G+ +V  ++  +L   
Sbjct: 25  CSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELLCVGFNSVTPIDTSLLLKS 84

Query: 73  GNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYC 112
           G+ C+VN G  +     I F Y WD  F  K +     C
Sbjct: 85  GDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123

[Close]

BLAST of Moc11g05250 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-11
Identity = 30/99 (30.30%), Postives = 47/99 (47.47%), Query Frame = 0


Query: 13  CSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGYKTVKDVNPKILYPQ 72
           C L+ + V+Q+ TG  V  K EW V ++N C  C      + C G+++V  V   +L   
Sbjct: 25  CHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLSCVGFQSVTPVATSLLSKS 84

Query: 73  GNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYC 112
           G++C++N G  +       F Y WD  F  K +     C
Sbjct: 85  GDICLLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVC 123

[Close]

BLAST of Moc11g05250 vs. TAIR 10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-11
Identity = 36/103 (34.95%), Postives = 50/103 (48.54%), Query Frame = 0


Query: 196 GNCQCSLGDITIRQNTTGSEVEGKQEWRATITNNCVCSQYSVKFDCNGFNTVEDVDSSIL 255
           G C C+ G I I    TG E+ G+ EW+ T+ N C C Q  V   C GF   + V   +L
Sbjct: 20  GLCLCTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKHVTLSCGGFAPAKPVKPLLL 79

Query: 256 MVFGSVCLVNNGEPIFKPKPISFTYAWDNAFPFKPLFSQVSCS 299
              G+ CL+  G  +       FTYA    + F+P+ S+V  S
Sbjct: 80  QPQGNTCLMIKGAALPAGATAQFTYA-GQPYIFRPVGSKVDPS 121

[Close]

BLAST of Moc11g05250 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 33/111 (29.73%), Postives = 50/111 (45.05%), Query Frame = 0


Query: 2   ISSATKPCNCQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAA-CSQMAITVDCNGYKT 61
           I   T      CS DDI + Q +T     G   + V I N C + C+   I V C  + +
Sbjct: 69  IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSS 128

Query: 62  VKDVNPKILYP-QGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTY 111
           V+ VNP++      + C+VN G P+     +SF YA    +P    S + +
Sbjct: 129 VRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSCF 179

[Close]

BLAST of Moc11g05250 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 45.8 bits (107), Expect = 6.9e-05
Identity = 27/103 (26.21%), Postives = 48/103 (46.60%), Query Frame = 0


Query: 11  CQCSLDDIKVRQTATGSKVLGKQEWRVTISNECAACSQMAITVDCNGY--KTVKDVNPKI 70
           C+    +  VRQT    K    +++RV + N+C  C  + + + C G+    V     ++
Sbjct: 26  CEGKSSEPAVRQTQV--KWREGKKFRVEVMNKCPMCPIINLRLKCQGFPQSLVDPTFLRV 85

Query: 71  LYPQGNVCMVNTGWPVRKSNPISFTYAWDNPFPFKPVSSTTYC 112
           L      C+VN G P+     +SF Y+  + F  +P+S +  C
Sbjct: 86  LSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQC 126

The following BLAST results are available for this feature:

BLAST of Moc11g05250 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60075.1	7.9e-43	81.55	hypothetical protein Csa_001952 [Cucumis sativus]	[more]
XP_038896903.1	3.0e-42	81.55	TPD1 protein homolog 1-like [Benincasa hispida]	[more]
XP_022137447.1	1.1e-33	48.66	uncharacterized protein LOC111008881 isoform X2 [Momordica charantia]	[more]
XP_022137438.1	1.1e-33	48.66	uncharacterized protein LOC111008881 isoform X1 [Momordica charantia]	[more]
XP_022141896.1	2.8e-32	66.02	uncharacterized protein At1g05835-like [Momordica charantia]	[more]

BLAST of Moc11g05250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3T1	1.8e-05	29.73	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
A8MS78	9.7e-04	26.21	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of Moc11g05250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDN0	3.8e-43	81.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1	[more]
A0A0A0LEA1	2.0e-36	72.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1	[more]
A0A6J1CAC8	5.5e-34	48.66	uncharacterized protein LOC111008881 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C8A1	5.5e-34	48.66	uncharacterized protein LOC111008881 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CKK7	1.4e-32	66.02	uncharacterized protein At1g05835-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Moc11g05250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32110.1	1.2e-12	32.32	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32105.1	1.7e-11	30.30	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32090.1	2.9e-11	34.95	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT1G32583.1	1.3e-06	29.73	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G05835.1	6.9e-05	26.21	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF44	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN	coord: 132..195
None	No IPR available	PANTHER	PTHR33184:SF44	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN	coord: 196..298 coord: 7..111
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 132..195
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 7..111
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 196..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g05250.1	Moc11g05250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination
molecular_function	GO:0016740	transferase activity