Moc11g04450 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g04450
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Transmembrane protein
Location	chr11: 2866189 .. 2866524 (-)
RNA-Seq Expression	Moc11g04450
Synteny	Moc11g04450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAGTAA

mRNA sequence

ATGTCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAGTAA

Coding sequence (CDS)

ATGTCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAGTAA

Protein sequence

MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE

Homology

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BLAST of Moc11g04450 vs. NCBI nr
Match: XP_022142189.1 (uncharacterized protein LOC111012362 [Momordica charantia])

HSP 1 Score: 224.9 bits (572), Expect = 3.3e-55
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIF 60
           MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIF
Sbjct: 1   MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIF 60

Query: 61  VIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           VIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE
Sbjct: 61  VIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 111

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BLAST of Moc11g04450 vs. NCBI nr
Match: XP_038899620.1 (uncharacterized protein LOC120086878 [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61
           SRRS FSSYDR VAVGLGLLAVVSPLYIDRRP++E  E+EESSIN GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPALLMTLIFI 68

Query: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

[Close]

BLAST of Moc11g04450 vs. NCBI nr
Match: XP_022936874.1 (uncharacterized protein LOC111443331 [Cucurbita moschata] >XP_023534909.1 uncharacterized protein LOC111796500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 4.8e-46
Identity = 91/110 (82.73%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of Moc11g04450 vs. NCBI nr
Match: XP_022977145.1 (uncharacterized protein LOC111477299 [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLMTLIFI 68

Query: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of Moc11g04450 vs. NCBI nr
Match: KAG6591490.1 (hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.2 bits (487), Expect = 2.4e-45
Identity = 90/110 (81.82%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+ W+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMLWD 118

[Close]

BLAST of Moc11g04450 vs. ExPASy TrEMBL
Match: A0A6J1CKV5 (uncharacterized protein LOC111012362 OS=Momordica charantia OX=3673 GN=LOC111012362 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIF 60
           MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIF
Sbjct: 1   MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIF 60

Query: 61  VIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           VIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE
Sbjct: 61  VIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 111

[Close]

BLAST of Moc11g04450 vs. ExPASy TrEMBL
Match: A0A6J1F9J0 (uncharacterized protein LOC111443331 OS=Cucurbita moschata OX=3662 GN=LOC111443331 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46
Identity = 91/110 (82.73%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of Moc11g04450 vs. ExPASy TrEMBL
Match: A0A6J1ILG7 (uncharacterized protein LOC111477299 OS=Cucurbita maxima OX=3661 GN=LOC111477299 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.2e-46
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLMTLIFI 68

Query: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of Moc11g04450 vs. ExPASy TrEMBL
Match: A0A5D3D907 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001720 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 93/111 (83.78%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIF 60
           MSRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF
Sbjct: 8   MSRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPALLIILIF 67

Query: 61  VIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           +IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 68  IIAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

[Close]

BLAST of Moc11g04450 vs. ExPASy TrEMBL
Match: A0A1S3BUL9 (uncharacterized protein LOC103493702 OS=Cucumis melo OX=3656 GN=LOC103493702 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 93/111 (83.78%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIF 60
           MSRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF
Sbjct: 8   MSRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPALLIILIF 67

Query: 61  VIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 112
           +IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 68  IIAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

[Close]

BLAST of Moc11g04450 vs. TAIR 10
Match: AT5G21910.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 5.9e-18
Identity = 48/100 (48.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 7   FSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLL 66
           F++  +L+A+ L +LAV+SPLYIDR    +L+E+EE   +F F   +LL+ LI  IA  L
Sbjct: 13  FTTSRKLLAISLSVLAVLSPLYIDRLSEEDLEEEEE-LFSFMFSFSLLLLLLILAIALSL 72

Query: 67  HLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRAS 107
           + +    RFD YWIHR+ GS  G+  IL+LL FVL C+AS
Sbjct: 73  YSDPSLTRFDPYWIHRLCGSFGGLLVILILLVFVLICKAS 111

The following BLAST results are available for this feature:

BLAST of Moc11g04450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142189.1	3.3e-55	100.00	uncharacterized protein LOC111012362 [Momordica charantia]	[more]
XP_038899620.1	1.3e-46	86.36	uncharacterized protein LOC120086878 [Benincasa hispida]	[more]
XP_022936874.1	4.8e-46	82.73	uncharacterized protein LOC111443331 [Cucurbita moschata] >XP_023534909.1 unchar...	[more]
XP_022977145.1	1.1e-45	81.82	uncharacterized protein LOC111477299 [Cucurbita maxima]	[more]
KAG6591490.1	2.4e-45	81.82	hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc11g04450 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g04450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKV5	1.6e-55	100.00	uncharacterized protein LOC111012362 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1F9J0	2.3e-46	82.73	uncharacterized protein LOC111443331 OS=Cucurbita moschata OX=3662 GN=LOC1114433...	[more]
A0A6J1ILG7	5.2e-46	81.82	uncharacterized protein LOC111477299 OS=Cucurbita maxima OX=3661 GN=LOC111477299...	[more]
A0A5D3D907	1.2e-45	83.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUL9	1.2e-45	83.78	uncharacterized protein LOC103493702 OS=Cucumis melo OX=3656 GN=LOC103493702 PE=...	[more]

BLAST of Moc11g04450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21910.1	5.9e-18	48.00	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35758:SF2	TRANSMEMBRANE PROTEIN	coord: 3..107
None	No IPR available	PANTHER	PTHR35758	TRANSMEMBRANE PROTEIN	coord: 3..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g04450.1	Moc11g04450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane