Moc11g01920 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g01920
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein RADIALIS-like 3
Location	chr11: 1237971 .. 1238416 (-)
RNA-Seq Expression	Moc11g01920
Synteny	Moc11g01920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCGGCGGGTCGAACTGGACGGCGAAGCAGAACAAAGTTTTCGAGAATGCTTTAGCGGTCTACGACAAGGACACGCCGGACCGGTGGCATAACCTCGCCAGAGCGGTCGGCGGAAAGACGGCGGAGGAAGTGAAGCGCCACTACGAACGGCTCGTCGATGACGTCAACAAGATCGAGACCGGCCAAGTTCCGTTCCCCAATTACAGAAAATCCGCCCACGGACCCAGAGGATTCTGCTTTATCGACGAAGAAAAACGGTAACAAAACAACCAAACGCCGTTTTCTTTTTTCTTAAAAAAAGAAATAGCATTTTGTTTGTTTCTAATTTTAGCCAAGATTTCAAAAGTATTTAAAAGTAAACTAGTTTTAAAATTTAAATTAATTTAAGCATTTGTGGTTGTTTGAATTGATGCAGTATGAGGAGTCTACGGCTGCACTGA

mRNA sequence

ATGGGTTCCGGCGGGTCGAACTGGACGGCGAAGCAGAACAAAGTTTTCGAGAATGCTTTAGCGGTCTACGACAAGGACACGCCGGACCGGTGGCATAACCTCGCCAGAGCGGTCGGCGGAAAGACGGCGGAGGAAGTGAAGCGCCACTACGAACGGCTCGTCGATGACGTCAACAAGATCGAGACCGGCCAAGTTCCGTTCCCCAATTACAGAAAATCCGCCCACGGACCCAGAGGATTCTGCTTTATCGACGAAGAAAAACGTATGAGGAGTCTACGGCTGCACTGA

Coding sequence (CDS)

ATGGGTTCCGGCGGGTCGAACTGGACGGCGAAGCAGAACAAAGTTTTCGAGAATGCTTTAGCGGTCTACGACAAGGACACGCCGGACCGGTGGCATAACCTCGCCAGAGCGGTCGGCGGAAAGACGGCGGAGGAAGTGAAGCGCCACTACGAACGGCTCGTCGATGACGTCAACAAGATCGAGACCGGCCAAGTTCCGTTCCCCAATTACAGAAAATCCGCCCACGGACCCAGAGGATTCTGCTTTATCGACGAAGAAAAACGTATGAGGAGTCTACGGCTGCACTGA

Protein sequence

MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH

Homology

[Close]

BLAST of Moc11g01920 vs. NCBI nr
Match: XP_022138113.1 (protein RADIALIS-like 3 [Momordica charantia])

HSP 1 Score: 204.5 bits (519), Expect = 4.0e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 60
           MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI
Sbjct: 26  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 85

Query: 61  ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 96
           ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH
Sbjct: 86  ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 120

[Close]

BLAST of Moc11g01920 vs. NCBI nr
Match: XP_038905673.1 (protein RADIALIS-like 3 [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 3.1e-41
Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 60
          MGS GS+WTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYERLV+DVNKI
Sbjct: 1  MGS-GSHWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYERLVEDVNKI 60

Query: 61 ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 96
          ETGQVPFPNYR+S    RGFCF+DEE+RMRSLRLH
Sbjct: 61 ETGQVPFPNYRRSGPAVRGFCFVDEEQRMRSLRLH 94

[Close]

BLAST of Moc11g01920 vs. NCBI nr
Match: XP_004147867.1 (protein RADIALIS-like 3 [Cucumis sativus] >KGN59962.1 hypothetical protein Csa_001999 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 5.4e-38
Identity = 79/95 (83.16%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 60
          MGS GSNWTAKQNKVFENALA+YDKDTP+RW NLARAVGGKTAEEVKRHYERLV+DVNKI
Sbjct: 1  MGS-GSNWTAKQNKVFENALAIYDKDTPERWQNLARAVGGKTAEEVKRHYERLVEDVNKI 60

Query: 61 ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 96
          ETGQVPFPNYR+S    RGF F+D+E+RMRSL+L+
Sbjct: 61 ETGQVPFPNYRRSVPAARGFYFLDQEQRMRSLQLN 94

[Close]

BLAST of Moc11g01920 vs. NCBI nr
Match: XP_008465612.1 (PREDICTED: protein RADIALIS-like 3 [Cucumis melo] >KAA0041605.1 protein RADIALIS-like 3 [Cucumis melo var. makuwa] >TYK19652.1 protein RADIALIS-like 3 [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.1e-37
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 60
          MGS GSNWTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYERLV+DVNKI
Sbjct: 1  MGS-GSNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYERLVEDVNKI 60

Query: 61 ETGQVPFPNYRKSAHGPRGFCFIDEEKR 89
          ETGQVPFPNYR+S    RGFCF+D+E+R
Sbjct: 61 ETGQVPFPNYRRSGPAARGFCFLDQEQR 87

[Close]

BLAST of Moc11g01920 vs. NCBI nr
Match: XP_022941099.1 (protein RADIALIS-like 3 [Cucurbita moschata] >XP_023525029.1 protein RADIALIS-like 3 [Cucurbita pepo subsp. pepo] >KAG6608538.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037861.1 Protein RADIALIS-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 155.2 bits (391), Expect = 2.8e-34
Identity = 71/93 (76.34%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 3  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIET 62
          + GS WTAKQNK+FENALA+YD+DTP+RW+NLARAVGGKTAEEVKRHYE LV+DVNKIE+
Sbjct: 2  ASGSKWTAKQNKMFENALAIYDRDTPERWNNLARAVGGKTAEEVKRHYENLVEDVNKIES 61

Query: 63 GQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 96
          GQVPFP Y KS     GF F+DEE+RMRSL+LH
Sbjct: 62 GQVPFPAYTKSEPAGTGFRFVDEEQRMRSLQLH 94

[Close]

BLAST of Moc11g01920 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-27
Identity = 61/92 (66.30%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 3  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIET 62
          S GS WTAKQNK FE ALA YD+DTP+RW N+A+ VGGKT EEVKRHYE LV D+N IE 
Sbjct: 10 SSGS-WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIEN 69

Query: 63 GQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRL 95
          G VPFPNYR S     G     EEKRMR++RL
Sbjct: 70 GHVPFPNYRTSGGCTNG-RLSQEEKRMRNMRL 99

[Close]

BLAST of Moc11g01920 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.0e-27
Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 4   GGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETG 63
           G  +WT KQNK FE ALAVYD+DTPDRWHN+ARAVGGKT EE KR Y+ LV D+  IE G
Sbjct: 10  GSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENG 69

Query: 64  QVPFPNYRKSAHGPRGFCFIDEEKRMRSLRL 95
            VPFP+Y+ +          DEEKRMRS++L
Sbjct: 70  HVPFPDYKTTTGNSNRGRLRDEEKRMRSMKL 100

[Close]

BLAST of Moc11g01920 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-25
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 6  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQV 65
          S WT  QNK+FE ALAVYDKDTPDRWHN+A+AVGGKT EEVKRHY+ LV+D+  IETG+V
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 66 PFPNYRKSAHGPRGFCFIDEEKRMRSLRL 95
          P PNY+      R     D  K M++L++
Sbjct: 70 PLPNYKTFESNSRSINDFDTRK-MKNLKI 97

[Close]

BLAST of Moc11g01920 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24
Identity = 53/90 (58.89%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 5  GSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQ 64
          G  W+AK+NK FE ALAVYDKDTPDRW N+ARAV G+T EEVK+HYE LV+D+  IE+G+
Sbjct: 8  GRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGK 67

Query: 65 VPFPNYRKSAHGPRGFCFIDEEKRMRSLRL 95
          VPFPNYR +    +      +EKR R+L++
Sbjct: 68 VPFPNYRTTGGNMK-----TDEKRFRNLKI 92

[Close]

BLAST of Moc11g01920 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.7e-24
Identity = 48/73 (65.75%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIET 62
          S  ++WT K+NK+FE ALA YD+DTPDRWHN+ARAVGGK+AEEV+RHYE L+ DVN IE+
Sbjct: 7  SSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIES 66

Query: 63 GQVPFPNYRKSAH 76
          G+ P PNYR + +
Sbjct: 67 GRYPHPNYRSNGN 79

[Close]

BLAST of Moc11g01920 vs. ExPASy TrEMBL
Match: A0A6J1CC55 (protein RADIALIS-like 3 OS=Momordica charantia OX=3673 GN=LOC111009358 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.9e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 60
           MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI
Sbjct: 26  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 85

Query: 61  ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 96
           ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH
Sbjct: 86  ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 120

[Close]

BLAST of Moc11g01920 vs. ExPASy TrEMBL
Match: A0A0A0LGK8 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G857030 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 79/95 (83.16%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 60
          MGS GSNWTAKQNKVFENALA+YDKDTP+RW NLARAVGGKTAEEVKRHYERLV+DVNKI
Sbjct: 1  MGS-GSNWTAKQNKVFENALAIYDKDTPERWQNLARAVGGKTAEEVKRHYERLVEDVNKI 60

Query: 61 ETGQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 96
          ETGQVPFPNYR+S    RGF F+D+E+RMRSL+L+
Sbjct: 61 ETGQVPFPNYRRSVPAARGFYFLDQEQRMRSLQLN 94

[Close]

BLAST of Moc11g01920 vs. ExPASy TrEMBL
Match: A0A5D3D7Z0 (Protein RADIALIS-like 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00440 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.9e-38
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 60
          MGS GSNWTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYERLV+DVNKI
Sbjct: 1  MGS-GSNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYERLVEDVNKI 60

Query: 61 ETGQVPFPNYRKSAHGPRGFCFIDEEKR 89
          ETGQVPFPNYR+S    RGFCF+D+E+R
Sbjct: 61 ETGQVPFPNYRRSGPAARGFCFLDQEQR 87

[Close]

BLAST of Moc11g01920 vs. ExPASy TrEMBL
Match: A0A1S3CPA0 (protein RADIALIS-like 3 OS=Cucumis melo OX=3656 GN=LOC103503253 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.9e-38
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKI 60
          MGS GSNWTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYERLV+DVNKI
Sbjct: 1  MGS-GSNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYERLVEDVNKI 60

Query: 61 ETGQVPFPNYRKSAHGPRGFCFIDEEKR 89
          ETGQVPFPNYR+S    RGFCF+D+E+R
Sbjct: 61 ETGQVPFPNYRRSGPAARGFCFLDQEQR 87

[Close]

BLAST of Moc11g01920 vs. ExPASy TrEMBL
Match: A0A6J1FM85 (protein RADIALIS-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111446496 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34
Identity = 71/93 (76.34%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 3  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIET 62
          + GS WTAKQNK+FENALA+YD+DTP+RW+NLARAVGGKTAEEVKRHYE LV+DVNKIE+
Sbjct: 2  ASGSKWTAKQNKMFENALAIYDRDTPERWNNLARAVGGKTAEEVKRHYENLVEDVNKIES 61

Query: 63 GQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRLH 96
          GQVPFP Y KS     GF F+DEE+RMRSL+LH
Sbjct: 62 GQVPFPAYTKSEPAGTGFRFVDEEQRMRSLQLH 94

[Close]

BLAST of Moc11g01920 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-28
Identity = 61/92 (66.30%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 3  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIET 62
          S GS WTAKQNK FE ALA YD+DTP+RW N+A+ VGGKT EEVKRHYE LV D+N IE 
Sbjct: 10 SSGS-WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIEN 69

Query: 63 GQVPFPNYRKSAHGPRGFCFIDEEKRMRSLRL 95
          G VPFPNYR S     G     EEKRMR++RL
Sbjct: 70 GHVPFPNYRTSGGCTNG-RLSQEEKRMRNMRL 99

[Close]

BLAST of Moc11g01920 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 1.4e-28
Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 4   GGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETG 63
           G  +WT KQNK FE ALAVYD+DTPDRWHN+ARAVGGKT EE KR Y+ LV D+  IE G
Sbjct: 10  GSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENG 69

Query: 64  QVPFPNYRKSAHGPRGFCFIDEEKRMRSLRL 95
            VPFP+Y+ +          DEEKRMRS++L
Sbjct: 70  HVPFPDYKTTTGNSNRGRLRDEEKRMRSMKL 100

[Close]

BLAST of Moc11g01920 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-26
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 6  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQV 65
          S WT  QNK+FE ALAVYDKDTPDRWHN+A+AVGGKT EEVKRHY+ LV+D+  IETG+V
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 66 PFPNYRKSAHGPRGFCFIDEEKRMRSLRL 95
          P PNY+      R     D  K M++L++
Sbjct: 70 PLPNYKTFESNSRSINDFDTRK-MKNLKI 97

[Close]

BLAST of Moc11g01920 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-25
Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 6  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQV 65
          S WT  QNK+FE ALAVYDKDTPDRWHN+A+AVGGKT EEVKRHY+ LV+D+  IETG+V
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 66 PFPNYR 72
          P PNY+
Sbjct: 70 PLPNYK 75

[Close]

BLAST of Moc11g01920 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23
Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 3  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIET 62
          S  S+WT+KQNK+FE ALAVYDKDTPDRW N+A+AVG K+AEEVKRHY+ LV+D+  IE 
Sbjct: 7  SSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQ 66

Query: 63 GQVPFPNYRKSAHGPRGFCFIDEEKR-MRSLRL 95
            VP P Y+    G +     D + R M+++R+
Sbjct: 67 DLVPLPKYKTVDVGSKSRGIDDFDLRLMKNMRI 99

The following BLAST results are available for this feature:

BLAST of Moc11g01920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138113.1	4.0e-49	100.00	protein RADIALIS-like 3 [Momordica charantia]	[more]
XP_038905673.1	3.1e-41	87.37	protein RADIALIS-like 3 [Benincasa hispida]	[more]
XP_004147867.1	5.4e-38	83.16	protein RADIALIS-like 3 [Cucumis sativus] >KGN59962.1 hypothetical protein Csa_0...	[more]
XP_008465612.1	2.1e-37	86.36	PREDICTED: protein RADIALIS-like 3 [Cucumis melo] >KAA0041605.1 protein RADIALIS...	[more]
XP_022941099.1	2.8e-34	76.34	protein RADIALIS-like 3 [Cucurbita moschata] >XP_023525029.1 protein RADIALIS-li...	[more]

BLAST of Moc11g01920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVB8	1.5e-27	66.30	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	2.0e-27	61.54	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q1A173	3.2e-25	60.67	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q58FS3	1.2e-24	58.89	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q6NNN0	2.7e-24	65.75	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]

BLAST of Moc11g01920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CC55	1.9e-49	100.00	protein RADIALIS-like 3 OS=Momordica charantia OX=3673 GN=LOC111009358 PE=4 SV=1	[more]
A0A0A0LGK8	2.6e-38	83.16	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G857030 PE=4 S...	[more]
A0A5D3D7Z0	9.9e-38	86.36	Protein RADIALIS-like 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CPA0	9.9e-38	86.36	protein RADIALIS-like 3 OS=Cucumis melo OX=3656 GN=LOC103503253 PE=4 SV=1	[more]
A0A6J1FM85	1.3e-34	76.34	protein RADIALIS-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111446496 PE=4 SV=1	[more]

BLAST of Moc11g01920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	1.1e-28	66.30	RAD-like 1	[more]
AT2G21650.1	1.4e-28	61.54	Homeodomain-like superfamily protein	[more]
AT1G75250.2	2.3e-26	60.67	RAD-like 6	[more]
AT1G75250.1	4.3e-25	74.24	RAD-like 6	[more]
AT1G19510.1	2.3e-23	54.84	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 4..56 e-value: 4.0E-7 score: 39.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 6..54 score: 6.272103
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 7..54 e-value: 2.218E-6 score: 39.0958
None	No IPR available	GENE3D	1.10.10.60		coord: 3..67 e-value: 9.5E-24 score: 85.0
None	No IPR available	PANTHER	PTHR43952:SF52	MYB FAMILY TRANSCRIPTION FACTOR	coord: 4..95
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 4..95
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 3..58 score: 9.318489
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 6..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g01920.1	Moc11g01920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity