Moc11g01770 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g01770
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	myrosinase-binding protein 2-like
Location	chr11: 1161658 .. 1163856 (+)
RNA-Seq Expression	Moc11g01770
Synteny	Moc11g01770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAGAAATCTTTATCGACATCACGGCGTGGAGTCCGGTAGGGTATCTTTTCCAAATGGATTGCGCTATGGAGGCGATGAAACTGTGGTTCAGAAAGAACGGCTCCTGCGAGTCGCCGTCCAACTCGTCGACAAGGCGTAGGTTCGTAACTTCGTATCAATGCCGAATCTCTCGTCGGTATTTAAATTCAAGCTGCGGTAATTTCTTTCGGCTTATTCTTTCTGGTGATAGGAATTCGTTTTAAGTCGTGGGAATAAGACTCTGAAGCTATGGCTTTAGCCACTTGTGTAATGTGAATTGGAATTGTTACTATTTCTTCTTATATATTATTGTAATTGTTTTTACCTATGCTTTCGATTCTTCTTCTGTTCATATTTTGATTGTTATTTTCTGTTTACTCTGAAGATCCATCTTTCTCTCGCACCTAAACAACACATTACACGAATTCACACTCTCCTCACTACATCATACACAAGTGACAACCTAAAGAATTACTCTGATTTTTGGCGTAATCAAGAAGACCTAACTATTTTTTGAAAGTTCAAAATGATCAAAGCTCAAGGAATTTCACTTTATTGACTTCAGTTACAGTTTCAGGCTTCTAGCAATATTAATGTTCTTAATGACACAGTTGGCCTGTAGGTTGGTTCCAAATTATCAGCTATCATTTTATGCCCCTTCATCATCACCTTGCCTTTGGAATGTCTCTAATTCCTTGGTACTTTGCTCATGGTTATAGCCAAAGTTTGGCCTGTTCAATCATCACTAGACTAAAAACTTTAAGTTGATAAATTAGAATATATTGATCCGCTTCAATATCTCTACCATCTCCTTTATGCATGGATTTGAATATTAATTTAATTCACAAAGACCAATATTAGAACTGCTACTATCTAGCTCTGATTGAAGGTTCAATTATTATATCAATAAATAAAATAGCTTAGGTTGATAGATTATGATATATCTAATCAGTGCACCAGCTTATAGCTGACAAAAAAGTTATCTTCACATTCCCCAGACTCCATGAGAGTTTCTTGTTGGTTTGTGGTGGCTGATTTCTGCACCCATAACAGGGAGACTTGATCACAAGCTGCAAATAAACTTGGAGTGTGGAGGTTCCAAAGTTTGTGAACTCCTGGCCGATTCCCAAGACTCTTCAATGAGGTTTTAGATTTCGCTCAAAACTAGAATTAACCGAGCATAAACTCAAAAGATGAAGAATCAAAATGTCACCATGGAGATGTAGAAGGAATCTATTGTCTCAAGTCTTAACAAAGCTAAAGCTAACTAACTATTGGGTTATTGGAACAATCTAGGTTAGGCTGTTGGGTTGCAACGACTTTGAGTAATTTAGAAGTAAACCGTCATTATTGAAGATAACAGCAATTCAATTTCCAAATAAAATCTCATCTCCTGGCTGACCCCAGAATTAGATGGCAGACTGATGGATGTGTCATCAAAATCCCAACTGCTGTAACAACCCTTCAACAACCTAACAGAGAGAAACCACTACTTGAGTTCTCAAGTATTTTTTACTTTCATGCCAAAAGAAAGTGACTAGGAAAATAAAATGCATTTGAGTGAGTTAGCAATTTCTTATCCAAGTGTTCAGTGTTTTTGTAATCTTTCAGCCTTTCCCCAATCTCTTAGTTCGCAGTTGCATGTCCTTTTTGTTTCTGCCAAAATGACTGCTAGAACTTACGTTTTGATATTCTTCTTCTGGGCCATCCTCACGGTCATCACCCCCACTCTAATTTTCCTTTCAGAGAACTCAAGGCTTGCCTCTGCTGATTCAACCGGTAAGAAATCAGCTTCTGGCCTATGTAATGAAACTGAAGTGATTTTTTTTCTTCTTCTCGCTTCCGCCTTTGGTTTCAAATTTGATCTTCTTTTAATTCTCTTTAATCAGACAAGATTCATGACTTTGTGTTCATGTTACGTTTGGCAGGTCAGAAAAGTGCGAAAATCAAGACCAGAAAAATGATGGGTCGCTCAGTAGAAGATTCCATGCAAACGCTTATGGCTTTGGTTAAAATGCAAGCAGTGGCAACAGTAGCCGCTCAGGCGCCGGCGCCGGCGCCGACATTGGAAATCTCTGTTGAAGTTCCTGAAAAGGGAGGAGAGAAACAAAATTACAATAGCAAGCAAGACGTCATGTACAAAGAGACAGTGGTCCAAATGCTTTTCGAAGTATGA

mRNA sequence

ATGTTCAGAAATCTTTATCGACATCACGGCGTGGAGTCCGGTAGGGTATCTTTTCCAAATGGATTGCGCTATGGAGGCGATGAAACTGTGGTTCAGAAAGAACGGCTCCTGCGAGTCGCCGTCCAACTCGTCGACAAGGCTTGGCCTGTAGGGAGACTTGATCACAAGCTGCAAATAAACTTGGAGTGTGGAGGTTCCAAAGTTTGTGAACTCCTGGCCGATTCCCAAGACTCTTCAATGAGTTCGCAGTTGCATGTCCTTTTTGTTTCTGCCAAAATGACTGCTAGAACTTACGTTTTGATATTCTTCTTCTGGGCCATCCTCACGGTCATCACCCCCACTCTAATTTTCCTTTCAGAGAACTCAAGGCTTGCCTCTGCTGATTCAACCGGTAAGAAATCAGCTTCTGGCCTATGTCAGAAAAGTGCGAAAATCAAGACCAGAAAAATGATGGGTCGCTCAGTAGAAGATTCCATGCAAACGCTTATGGCTTTGGTTAAAATGCAAGCAGTGGCAACAGTAGCCGCTCAGGCGCCGGCGCCGGCGCCGACATTGGAAATCTCTGTTGAAGTTCCTGAAAAGGGAGGAGAGAAACAAAATTACAATAGCAAGCAAGACGTCATGTACAAAGAGACAGTGGTCCAAATGCTTTTCGAAGTATGA

Coding sequence (CDS)

ATGTTCAGAAATCTTTATCGACATCACGGCGTGGAGTCCGGTAGGGTATCTTTTCCAAATGGATTGCGCTATGGAGGCGATGAAACTGTGGTTCAGAAAGAACGGCTCCTGCGAGTCGCCGTCCAACTCGTCGACAAGGCTTGGCCTGTAGGGAGACTTGATCACAAGCTGCAAATAAACTTGGAGTGTGGAGGTTCCAAAGTTTGTGAACTCCTGGCCGATTCCCAAGACTCTTCAATGAGTTCGCAGTTGCATGTCCTTTTTGTTTCTGCCAAAATGACTGCTAGAACTTACGTTTTGATATTCTTCTTCTGGGCCATCCTCACGGTCATCACCCCCACTCTAATTTTCCTTTCAGAGAACTCAAGGCTTGCCTCTGCTGATTCAACCGGTAAGAAATCAGCTTCTGGCCTATGTCAGAAAAGTGCGAAAATCAAGACCAGAAAAATGATGGGTCGCTCAGTAGAAGATTCCATGCAAACGCTTATGGCTTTGGTTAAAATGCAAGCAGTGGCAACAGTAGCCGCTCAGGCGCCGGCGCCGGCGCCGACATTGGAAATCTCTGTTGAAGTTCCTGAAAAGGGAGGAGAGAAACAAAATTACAATAGCAAGCAAGACGTCATGTACAAAGAGACAGTGGTCCAAATGCTTTTCGAAGTATGA

Protein sequence

MFRNLYRHHGVESGRVSFPNGLRYGGDETVVQKERLLRVAVQLVDKAWPVGRLDHKLQINLECGGSKVCELLADSQDSSMSSQLHVLFVSAKMTARTYVLIFFFWAILTVITPTLIFLSENSRLASADSTGKKSASGLCQKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAPAPAPTLEISVEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV

Homology

[Close]

BLAST of Moc11g01770 vs. NCBI nr
Match: XP_022135153.1 (uncharacterized protein LOC111004493 isoform X1 [Momordica charantia])

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-57
Identity = 137/152 (90.13%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 69  CELLADSQDSSMSSQLHVLFVSAKMTARTYVLIFFFWAILTVITPTLIFLSENSRLASAD 128
           C L A  Q  S+SSQLHVLFVSAKMTARTYVLIFFFWAILTVITPTLIFLSENSRLASAD
Sbjct: 17  CNLSAFPQ--SLSSQLHVLFVSAKMTARTYVLIFFFWAILTVITPTLIFLSENSRLASAD 76

Query: 129 STGKKSASGLCQKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAPAPAPTLEIS 188
           STG        QKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAPAPAPTLEIS
Sbjct: 77  STG--------QKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAPAPAPTLEIS 136

Query: 189 VEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV 221
           VEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV
Sbjct: 137 VEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV 158

[Close]

BLAST of Moc11g01770 vs. NCBI nr
Match: XP_022142779.1 (uncharacterized protein LOC111004493 isoform X2 [Momordica charantia])

HSP 1 Score: 162.5 bits (410), Expect = 4.0e-36
Identity = 93/101 (92.08%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 120 ENSRLASADSTGKKSASGLCQKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAP 179
           ENSRLASADSTG        QKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAP
Sbjct: 48  ENSRLASADSTG--------QKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAP 107

Query: 180 APAPTLEISVEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV 221
           APAPTLEISVEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV
Sbjct: 108 APAPTLEISVEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV 140

[Close]

BLAST of Moc11g01770 vs. NCBI nr
Match: XP_030950546.1 (uncharacterized protein LOC115974360 [Quercus lobata])

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-06
Identity = 46/89 (51.69%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 96  RTYVLIFFFWAILTVITPTLIFLSENSRLASADSTGKKSASGLCQKSAKIKTRKMMGRSV 155
           RT+VLIFFFWA+LT+ITPTLI LSENS+    D  G        QK   IK RKMM    
Sbjct: 3   RTFVLIFFFWAVLTIITPTLIILSENSK-PKLDLNG--------QKDEVIKVRKMMLYIE 62

Query: 156 EDSMQTLMALVKMQAVATVAAQAPAPAPT 185
           + S +  +AL   +A A   A APAPAPT
Sbjct: 63  KYSTKIPIALAPKEAPAPAPAPAPAPAPT 82

[Close]

BLAST of Moc11g01770 vs. NCBI nr
Match: XP_040995953.1 (E3 ubiquitin-protein ligase TRIM33 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-05
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 96  RTYVLIFFFWAILTVITPTLIFLSENSRLASADSTGKKSASGLCQKSAKIKTRKMMG-RS 155
           RT+VLI FFWA+LT+ITPTLI LSENS+L   DS G+KS         K + R+MMG   
Sbjct: 3   RTFVLICFFWAVLTIITPTLILLSENSKL--LDSNGEKSG------GVKAQPRRMMGFAD 62

Query: 156 VEDSMQTLMALVKMQAVATVAAQAPAPAPTLE 187
            +   +  + L  M+A A   A APAPAP ++
Sbjct: 63  QKRPSKASIPLPLMEAPAPAPAPAPAPAPAVK 86

[Close]

BLAST of Moc11g01770 vs. NCBI nr
Match: XP_018857256.1 (myrosinase-binding protein 2-like [Juglans regia] >KAF5468510.1 hypothetical protein F2P56_012655 [Juglans regia])

HSP 1 Score: 58.5 bits (140), Expect = 8.2e-05
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 96  RTYVLIFFFWAILTVITPTLIFLSENSRLASADSTGKKSASGLCQKSAKIKTRKMMG-RS 155
           RT+VLI FFWA+LT+ITPTLI LSENS+L   DS G+KS      +  + + R+MMG   
Sbjct: 3   RTFVLICFFWAVLTIITPTLILLSENSKL--LDSNGEKS------EGVEAQPRRMMGFAD 62

Query: 156 VEDSMQTLMALVKMQAVATVAAQAPAPAPTLE 187
            +   +  + L  M+A A   A APAPAP ++
Sbjct: 63  QKRPSKAPIPLPLMEAPAPAPAPAPAPAPAVK 86

[Close]

BLAST of Moc11g01770 vs. ExPASy TrEMBL
Match: A0A6J1C406 (uncharacterized protein LOC111004493 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004493 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.9e-58
Identity = 137/152 (90.13%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 69  CELLADSQDSSMSSQLHVLFVSAKMTARTYVLIFFFWAILTVITPTLIFLSENSRLASAD 128
           C L A  Q  S+SSQLHVLFVSAKMTARTYVLIFFFWAILTVITPTLIFLSENSRLASAD
Sbjct: 17  CNLSAFPQ--SLSSQLHVLFVSAKMTARTYVLIFFFWAILTVITPTLIFLSENSRLASAD 76

Query: 129 STGKKSASGLCQKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAPAPAPTLEIS 188
           STG        QKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAPAPAPTLEIS
Sbjct: 77  STG--------QKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAPAPAPTLEIS 136

Query: 189 VEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV 221
           VEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV
Sbjct: 137 VEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV 158

[Close]

BLAST of Moc11g01770 vs. ExPASy TrEMBL
Match: A0A6J1CMG7 (uncharacterized protein LOC111004493 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004493 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.9e-36
Identity = 93/101 (92.08%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 120 ENSRLASADSTGKKSASGLCQKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAP 179
           ENSRLASADSTG        QKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAP
Sbjct: 48  ENSRLASADSTG--------QKSAKIKTRKMMGRSVEDSMQTLMALVKMQAVATVAAQAP 107

Query: 180 APAPTLEISVEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV 221
           APAPTLEISVEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV
Sbjct: 108 APAPTLEISVEVPEKGGEKQNYNSKQDVMYKETVVQMLFEV 140

[Close]

BLAST of Moc11g01770 vs. ExPASy TrEMBL
Match: A0A7N2KSG0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06
Identity = 46/89 (51.69%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 96  RTYVLIFFFWAILTVITPTLIFLSENSRLASADSTGKKSASGLCQKSAKIKTRKMMGRSV 155
           RT+VLIFFFWA+LT+ITPTLI LSENS+    D  G        QK   IK RKMM    
Sbjct: 3   RTFVLIFFFWAVLTIITPTLIILSENSK-PKLDLNG--------QKDEVIKVRKMMLYIE 62

Query: 156 EDSMQTLMALVKMQAVATVAAQAPAPAPT 185
           + S +  +AL   +A A   A APAPAPT
Sbjct: 63  KYSTKIPIALAPKEAPAPAPAPAPAPAPT 82

[Close]

BLAST of Moc11g01770 vs. ExPASy TrEMBL
Match: A0A2I4HM67 (myrosinase-binding protein 2-like OS=Juglans regia OX=51240 GN=LOC109019428 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.0e-05
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 96  RTYVLIFFFWAILTVITPTLIFLSENSRLASADSTGKKSASGLCQKSAKIKTRKMMG-RS 155
           RT+VLI FFWA+LT+ITPTLI LSENS+L   DS G+KS      +  + + R+MMG   
Sbjct: 3   RTFVLICFFWAVLTIITPTLILLSENSKL--LDSNGEKS------EGVEAQPRRMMGFAD 62

Query: 156 VEDSMQTLMALVKMQAVATVAAQAPAPAPTLE 187
            +   +  + L  M+A A   A APAPAP ++
Sbjct: 63  QKRPSKAPIPLPLMEAPAPAPAPAPAPAPAVK 86

[Close]

BLAST of Moc11g01770 vs. ExPASy TrEMBL
Match: A0A6A5P8S4 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00001828 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 44/96 (45.83%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 93  MTARTYVLIFFFWAILTVITPTLIFLSENSRLASADSTGKKSASGLCQKSAKIKTRKMMG 152
           M  RT V IFF WA+LT++TPTLIFLSENS+ A     G  ++ G+       K RKM G
Sbjct: 1   MNERTLVPIFFVWALLTIVTPTLIFLSENSK-ADLHLNGNYTSEGM-------KARKMFG 60

Query: 153 RSV-EDSMQTLMALVKM----QAVATVAAQAPAPAP 184
            +  +D ++TL +L K     + VA+ +A APAPAP
Sbjct: 61  YTQNDDIIRTLPSLPKSVEAEEEVASASASAPAPAP 88

The following BLAST results are available for this feature:

BLAST of Moc11g01770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135153.1	1.4e-57	90.13	uncharacterized protein LOC111004493 isoform X1 [Momordica charantia]	[more]
XP_022142779.1	4.0e-36	92.08	uncharacterized protein LOC111004493 isoform X2 [Momordica charantia]	[more]
XP_030950546.1	3.3e-06	51.69	uncharacterized protein LOC115974360 [Quercus lobata]	[more]
XP_040995953.1	2.8e-05	47.83	E3 ubiquitin-protein ligase TRIM33 [Juglans microcarpa x Juglans regia]	[more]
XP_018857256.1	8.2e-05	46.74	myrosinase-binding protein 2-like [Juglans regia] >KAF5468510.1 hypothetical pro...	[more]

BLAST of Moc11g01770 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g01770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C406	6.9e-58	90.13	uncharacterized protein LOC111004493 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CMG7	1.9e-36	92.08	uncharacterized protein LOC111004493 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A7N2KSG0	1.6e-06	51.69	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2I4HM67	4.0e-05	46.74	myrosinase-binding protein 2-like OS=Juglans regia OX=51240 GN=LOC109019428 PE=4...	[more]
A0A6A5P8S4	1.2e-04	45.83	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00001828 PE=4 SV=1	[more]

BLAST of Moc11g01770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38396	TRANSMEMBRANE PROTEIN	coord: 93..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g01770.1	Moc11g01770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane