Moc11g00880 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g00880
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	high mobility group B protein 9
Location	chr11: 567649 .. 569969 (+)
RNA-Seq Expression	Moc11g00880
Synteny	Moc11g00880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACCGCCGGCGAGGAGCAAGAGCTGGAACGCCGGCCAAGACAAGCATTATCCGCGGGCGCTGGCCACTCACGACGAAGTTATCTCCGACCCCATTGTTTTTTGGGACACTTTGAGACGCTTCCATTTTATGATGAACACAAAGTTCATGTGAGGGATTTTTCTTCTTCTTCTTCTTCTTCTCTTTTTGACTTGGTAACTTAAAGCTTTGTAATATTAATGGCGGCCCGGCTCCACCAACGAAAAGACCCCACACTTTTTCTTTCTCTGATTTCTCATTCTTTTTCCAGTAAAATAAGAAATACAAGTCGGTTTCCTAATGGGAGTTTTCAACTTTTTTCTTTCTCCTCTCTTTTCCTAATATTCTAAAGGATTCCTGTGATTGGAGGGAAGGAGCTAGATTTGCATGTTCTATATTCAGAGGTTACCAGAAGAGGCGGCCATGAAAAGGTAAAAACTTGGCCCTTCGTCTTCCATTTTCAGAAAGCTTTTATTTTGAGAAGTGGACTGATCTTGAACTCCTTTCATGGCGGCTTAGGTTGTCGCAGAGAAGAAATGGAGGGAAGTGGGAAGTGTTTTCAAGTTCTCTCCGACGACGACGAGTGCCTCATTTGTGTTGAGAAAGCATTATCTAAGTCTTCTTTACCATTACGAGCAAGTTTACTTGTTTAGCCGGCAAGGCCCCATCTGTGTTCCTCAAGGTATCTTTTTTTATTTCTCTCCCTTCATTTCTTTTCTCTCTTTATCCATTTTTTTTTGTCCCACATCGGATTTTGCTGTAAATCTGATGTCTGTTTTGTCTTCTTCTTCTGCTGCAGCGCCATTTTCTTTTGGTAGCCCTTCCAGTGAAAACGAATTGGCTCTGGTGGAATATACCCCCAAAACCACGTCGTTTTCCCCTGGTCCGCCTGCTGAAGGTGACTCTTACCTTTTTACATTCACTTCTTTTAAATTCCTTCTTTTTTCTTCGTGGGGTCTAGCAATAAAAGTCAAACAGTTGCTCCCATTCGGTTTGAGAAATTATTAGAAGTGACCACCACAGTGTAACCCGACGAGAGGCTAGCTACTACTACACCAAATAAGGTCTACCTACAGTGTTTTTTTGTGGGTCATTGTTGGGTTTCAACTTTTCATGTACTTTTGTCTCATTCTCTATTTTCATGTCTTGAGAATGTGTTCTTTTTTGACGTTATGCTTTGTTTTGGGCTAAGGCTGTTCTTTTTCTTTGGTGTGGAAATCACTTGATGTTTTTTTCAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTGGTGACTGTGAAATTGGGATCTGAAGTTCTGAGAGGAGTACTTTACCATCCGGAGCAGCCCTCCCCATCCAATCTACGACCCCAATCAATCAATGCCATTGTACCATACACCGGTGGCAGGCTTCGACACTCCGGTCGACGGCATCGGAGGAGCCGGAGAAAGGGAGACCCGAACCACCCGAAACCGAACCGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTGAAATCTCTGTACCCAAATAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAATAACCTCAGCCCTGAAGAGAGGACGGTCTGTCTTTTTTCTCTCAAGCTTTTTCCCAAAGGCCCAACAGTTAGTAAACTTTTCTGTGTTTGATCAAATGAGTATTTTTCTTTCGGCTTGTGTAGGTTTATCAGAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAAATGAGGCAGGCAACTGATATTCATGAACCTAACTATTCAAAACATGGAGAGTGAGTAGCAGAGGAGGAAGAAGAGAATTCAGCAGTTGATTCCTTTTTGGGCTCTACTAAAGTTATATGATATATAGACTTTGTATCATAATCTCCTAACTTTACATGGTAAACCATAGGTTCTCCTCATATCCAAAGTGGTTTGGTCACAAGTTTTACAACCACTGCTGCTACAATCTATAAAGTTCACTCTTGGAACTGGCATTTTATATTGACAGCCGTCAAGAATGTTGAGATTTTCAGCCTTAAAATGCCAGAGGAATGTACCTATTTCAGGGCGCTTTTACTAATAGGATGTGATAATTTTGTTTTTTTCTTTCCAATAGAACGCCCATTAGAACTCGTGGATGCAAGAAAAGCATCGGTTTGATGTTCTACGAAGACCTTCCATCCAAGGAGGATGAGGAAGCCAACAGTATGAGCTTGCGAGAGAGGCTTCTTCTATCCCATGCGCAGCAATGTTATAATATCTACAGACATGGTTAG

mRNA sequence

ATGTCACCGCCGGCGAGGAGCAAGAGCTGGAACGCCGGCCAAGACAAGCATTATCCGCGGGCGCTGGCCACTCACGACGAAGTTATCTCCGACCCCATTGTTTTTTGGGACACTTTGAGACGCTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGATTTGCATGTTCTATATTCAGAGGTTACCAGAAGAGGCGGCCATGAAAAGGTTGTCGCAGAGAAGAAATGGAGGGAAGTGGGAAGTGTTTTCAAGTTCTCTCCGACGACGACGAGTGCCTCATTTGTGTTGAGAAAGCATTATCTAAGTCTTCTTTACCATTACGAGCAAGTTTACTTGTTTAGCCGGCAAGGCCCCATCTGTGTTCCTCAAGCGCCATTTTCTTTTGGTAGCCCTTCCAGTGAAAACGAATTGGCTCTGGTGGAATATACCCCCAAAACCACGTCGTTTTCCCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTGGTGACTGTGAAATTGGGATCTGAAGTTCTGAGAGGAGTACTTTACCATCCGGAGCAGCCCTCCCCATCCAATCTACGACCCCAATCAATCAATGCCATTGTACCATACACCGGTGGCAGGCTTCGACACTCCGGTCGACGGCATCGGAGGAGCCGGAGAAAGGGAGACCCGAACCACCCGAAACCGAACCGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTGAAATCTCTGTACCCAAATAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAATAACCTCAGCCCTGAAGAGAGGACGGTTTATCAGAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAAATGAGGCAGGCAACTGATATTCATGAACCTAACTATTCAAAACATGGAGAAACGCCCATTAGAACTCGTGGATGCAAGAAAAGCATCGGTTTGATGTTCTACGAAGACCTTCCATCCAAGGAGGATGAGGAAGCCAACAGTATGAGCTTGCGAGAGAGGCTTCTTCTATCCCATGCGCAGCAATGTTATAATATCTACAGACATGGTTAG

Coding sequence (CDS)

ATGTCACCGCCGGCGAGGAGCAAGAGCTGGAACGCCGGCCAAGACAAGCATTATCCGCGGGCGCTGGCCACTCACGACGAAGTTATCTCCGACCCCATTGTTTTTTGGGACACTTTGAGACGCTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGATTTGCATGTTCTATATTCAGAGGTTACCAGAAGAGGCGGCCATGAAAAGGTTGTCGCAGAGAAGAAATGGAGGGAAGTGGGAAGTGTTTTCAAGTTCTCTCCGACGACGACGAGTGCCTCATTTGTGTTGAGAAAGCATTATCTAAGTCTTCTTTACCATTACGAGCAAGTTTACTTGTTTAGCCGGCAAGGCCCCATCTGTGTTCCTCAAGCGCCATTTTCTTTTGGTAGCCCTTCCAGTGAAAACGAATTGGCTCTGGTGGAATATACCCCCAAAACCACGTCGTTTTCCCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTGGTGACTGTGAAATTGGGATCTGAAGTTCTGAGAGGAGTACTTTACCATCCGGAGCAGCCCTCCCCATCCAATCTACGACCCCAATCAATCAATGCCATTGTACCATACACCGGTGGCAGGCTTCGACACTCCGGTCGACGGCATCGGAGGAGCCGGAGAAAGGGAGACCCGAACCACCCGAAACCGAACCGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTGAAATCTCTGTACCCAAATAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAATAACCTCAGCCCTGAAGAGAGGACGGTTTATCAGAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAAATGAGGCAGGCAACTGATATTCATGAACCTAACTATTCAAAACATGGAGAAACGCCCATTAGAACTCGTGGATGCAAGAAAAGCATCGGTTTGATGTTCTACGAAGACCTTCCATCCAAGGAGGATGAGGAAGCCAACAGTATGAGCTTGCGAGAGAGGCTTCTTCTATCCCATGCGCAGCAATGTTATAATATCTACAGACATGGTTAG

Protein sequence

MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKMRQATDIHEPNYSKHGETPIRTRGCKKSIGLMFYEDLPSKEDEEANSMSLRERLLLSHAQQCYNIYRHG

Homology

[Close]

BLAST of Moc11g00880 vs. NCBI nr
Match: XP_022140929.1 (high mobility group B protein 9 [Momordica charantia])

HSP 1 Score: 669.1 bits (1725), Expect = 2.3e-188
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 40  MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 99

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 100 DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 159

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT
Sbjct: 160 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 219

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP
Sbjct: 220 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 279

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
Sbjct: 280 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 339

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMRQATDIHEPNYSKHGE
Sbjct: 340 LKEYKEKMRQATDIHEPNYSKHGE 363

[Close]

BLAST of Moc11g00880 vs. NCBI nr
Match: XP_008452910.1 (PREDICTED: high mobility group B protein 9 [Cucumis melo] >ADN34129.1 high mobility group family [Cucumis melo subsp. melo] >KAA0064618.1 high mobility group B protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 625.2 bits (1611), Expect = 3.7e-175
Identity = 301/324 (92.90%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPAR+K+WN G DKHYP  LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           F RQGPICVPQAPFSFGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVT
Sbjct: 121 FGRQGPICVPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVT 180

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHPEQP PS+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRE 300

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMR  TD+   NYSKHG+
Sbjct: 301 LKEYKEKMRMGTDVDGANYSKHGD 324

[Close]

BLAST of Moc11g00880 vs. NCBI nr
Match: XP_038899499.1 (high mobility group B protein 9-like [Benincasa hispida])

HSP 1 Score: 624.4 bits (1609), Expect = 6.4e-175
Identity = 303/324 (93.52%), Postives = 310/324 (95.68%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPA +KSWN G DKHYP  LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 39  MSPPATTKSWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 98

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 99  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 158

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           F RQGPICVPQAPF  GSP+SENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT
Sbjct: 159 FGRQGPICVPQAPFPLGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 218

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSE+LRGVLYHPEQP PS+LRPQS NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKP
Sbjct: 219 VKLGSEILRGVLYHPEQPPPSDLRPQSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKP 278

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
Sbjct: 279 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 338

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMRQA+D+ +  YSKHGE
Sbjct: 339 LKEYKEKMRQASDV-DGVYSKHGE 361

[Close]

BLAST of Moc11g00880 vs. NCBI nr
Match: XP_004145526.1 (high mobility group B protein 9 [Cucumis sativus] >KGN55473.1 hypothetical protein Csa_011977 [Cucumis sativus])

HSP 1 Score: 621.3 bits (1601), Expect = 5.4e-174
Identity = 298/324 (91.98%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPAR+K+WN G DKHYP +LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           F RQGPICVPQAPF FGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVT
Sbjct: 121 FGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVT 180

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHP+QP PS+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPDQPPPSDLRPLSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRE 300

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMR  T++   NYSKHG+
Sbjct: 301 LKEYKEKMRLGTEVDGANYSKHGD 324

[Close]

BLAST of Moc11g00880 vs. NCBI nr
Match: XP_023535855.1 (high mobility group B protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 607.8 bits (1566), Expect = 6.2e-170
Identity = 296/325 (91.08%), Postives = 306/325 (94.15%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPAR+KS N G DK YP  LATHDEV+SDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKSGNGGVDKQYPPPLATHDEVVSDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVY+
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYM 120

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           F RQGPIC PQAPFSFGSP+SENELALVEYTPKTTSFSPGPPAEV GTIDGKFDCGYLV+
Sbjct: 121 FRRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVXGTIDGKFDCGYLVS 180

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHPE+P+PS+LRPQ  NAIVPYTG R RHSGRRHRRSRRKGDPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPEEPTPSDLRPQPTNAIVPYTGTRQRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKRE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE 300

Query: 301 LKEYKEKMRQAT-DIHEPNYSKHGE 325
           LKEYKEKMR A+ D+H  NYSK GE
Sbjct: 301 LKEYKEKMRLASDDVHAANYSKQGE 325

[Close]

BLAST of Moc11g00880 vs. ExPASy Swiss-Prot
Match: Q9SGS2 (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 2.3e-111
Identity = 209/305 (68.52%), Postives = 245/305 (80.33%), Query Frame = 0


Query: 16  KHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGH 75
           K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+
Sbjct: 25  KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGY 84

Query: 76  EKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFS 135
           EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HYEQV+LF+ +GP+  P A F 
Sbjct: 85  EKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATF- 144

Query: 136 FGSPSSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVL 195
             +PS+  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L
Sbjct: 145 HANPSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEIL 204

Query: 196 RGVLYHPEQPSPSNLRPQSI--NAIVPY--TGGRLRHSGRRHRRSRRKGDPNHPKPNRSG 255
            GVLYH  QP PS+  P ++  NA+VPY  TG R R  G+R RRSRR+ DPN+PKPNRSG
Sbjct: 205 NGVLYHSAQPGPSS-SPTAVLNNAVVPYVETGRRRRRLGKR-RRSRRREDPNYPKPNRSG 264

Query: 256 YNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEY 310
           YNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EER VYQ+IGLKDKERY+REL EY
Sbjct: 265 YNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEY 324

[Close]

BLAST of Moc11g00880 vs. ExPASy Swiss-Prot
Match: Q9MAT6 (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.2e-69
Identity = 151/358 (42.18%), Postives = 217/358 (60.61%), Query Frame = 0


Query: 23  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E+
Sbjct: 23  ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82

Query: 83  KWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSS- 142
           +W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F   G I     P S  SPS+ 
Sbjct: 83  RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQI----PPDSMQSPSAR 142

Query: 143 ----------ENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGS 202
                       EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GS
Sbjct: 143 PCFIQGAIRPSQELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGS 202

Query: 203 EVLRGVLYH-PEQPSPSNLRPQSINAIVPYT-----------GGRLRHSGRRHRRSRRKG 262
           E L+GVLY    Q + S   PQ  + ++P T           GG  +   RR +   ++ 
Sbjct: 203 EQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRR 262

Query: 263 DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKD 322
           DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+ +YQ   ++D
Sbjct: 263 DPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMED 322

Query: 323 KERYKRELKEYKEKMRQATDIHEPNYSKHGETPIRTRGCKKSIGLMFYEDLPSKEDEE 352
           KERY+ E+++Y+EK +    I           P++ R  ++++  M   DLP  E EE
Sbjct: 323 KERYRTEMEDYREKKKNGQLI-------SNAVPLQQRLPEQNVD-MAEADLPIDEVEE 368

[Close]

BLAST of Moc11g00880 vs. ExPASy Swiss-Prot
Match: Q9LTT3 (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.8e-55
Identity = 127/286 (44.41%), Postives = 173/286 (60.49%), Query Frame = 0


Query: 23  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++
Sbjct: 34  AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93

Query: 83  KWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSE 142
           KW+EV   F F  T TSASFVLRK+YL  L+  E VY   +  P+   Q+     +  + 
Sbjct: 94  KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--PVSSLQS-----TDEAL 153

Query: 143 NELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPS 202
             LA     P+     P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P+ PS S
Sbjct: 154 KSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQS 213

Query: 203 NLRPQSINAIVPYTGGRLRHSGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSL 262
               ++ +AIV       + S RRHR+  +    D   PK +RSGYNFFFAE++ +LK  
Sbjct: 214 QQTMETPSAIV-------QSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPE 273

Query: 263 YPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYK 306
           Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Sbjct: 274 YHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305

[Close]

BLAST of Moc11g00880 vs. ExPASy Swiss-Prot
Match: Q9LG02 (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 4.6e-43
Identity = 104/286 (36.36%), Postives = 155/286 (54.20%), Query Frame = 0


Query: 25  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKW 84
           + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RGG EKV+ +++ 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 85  REVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENE 144
           +EV   F F  T T+++FVLRK YL +L+ +E +Y F         QAP S      +  
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYF---------QAPLSTFWEKEKAL 149

Query: 145 LALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSN 204
             L+E +      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH    SP  
Sbjct: 150 KLLIEKSANRDKDSQELKPGTVITGIIDGKFESGYLISTKVGSEKLKGMLYH---ISPET 209

Query: 205 LRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN 264
            R                  G++  +S +      PK  R+GYNFF AE+  ++K+    
Sbjct: 210 KR------------------GKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAG 269

Query: 265 REREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKM 309
           ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+  M
Sbjct: 270 QKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLM 285

[Close]

BLAST of Moc11g00880 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-13
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 33  IVFWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVF 92
           + F D LR+FH    + F  IP +GGKELDLH LY+ VT  GG  KV  + +W E+   F
Sbjct: 17  LAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEF 76

Query: 93  KFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAP 134
            F  + ++A+F L+++YL  L  YE+V+ F        P  P
Sbjct: 77  NFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNP 118

[Close]

BLAST of Moc11g00880 vs. ExPASy TrEMBL
Match: A0A6J1CH52 (high mobility group B protein 9 OS=Momordica charantia OX=3673 GN=LOC111011470 PE=4 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 1.1e-188
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 40  MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 99

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 100 DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 159

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT
Sbjct: 160 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 219

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP
Sbjct: 220 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 279

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
Sbjct: 280 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 339

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMRQATDIHEPNYSKHGE
Sbjct: 340 LKEYKEKMRQATDIHEPNYSKHGE 363

[Close]

BLAST of Moc11g00880 vs. ExPASy TrEMBL
Match: A0A5A7VAK3 (High mobility group B protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003410 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.8e-175
Identity = 301/324 (92.90%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPAR+K+WN G DKHYP  LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           F RQGPICVPQAPFSFGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVT
Sbjct: 121 FGRQGPICVPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVT 180

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHPEQP PS+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRE 300

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMR  TD+   NYSKHG+
Sbjct: 301 LKEYKEKMRMGTDVDGANYSKHGD 324

[Close]

BLAST of Moc11g00880 vs. ExPASy TrEMBL
Match: E5GCD0 (High mobility group family OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.8e-175
Identity = 301/324 (92.90%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPAR+K+WN G DKHYP  LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           F RQGPICVPQAPFSFGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVT
Sbjct: 121 FGRQGPICVPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVT 180

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHPEQP PS+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRE 300

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMR  TD+   NYSKHG+
Sbjct: 301 LKEYKEKMRMGTDVDGANYSKHGD 324

[Close]

BLAST of Moc11g00880 vs. ExPASy TrEMBL
Match: A0A1S3BUE9 (high mobility group B protein 9 OS=Cucumis melo OX=3656 GN=LOC103493788 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.8e-175
Identity = 301/324 (92.90%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPAR+K+WN G DKHYP  LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           F RQGPICVPQAPFSFGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVT
Sbjct: 121 FGRQGPICVPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVT 180

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHPEQP PS+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRE 300

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMR  TD+   NYSKHG+
Sbjct: 301 LKEYKEKMRMGTDVDGANYSKHGD 324

[Close]

BLAST of Moc11g00880 vs. ExPASy TrEMBL
Match: A0A0A0L181 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652850 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.6e-174
Identity = 298/324 (91.98%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MSPPARSKSWNAGQDKHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60
           MSPPAR+K+WN G DKHYP +LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVT 180
           F RQGPICVPQAPF FGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVT
Sbjct: 121 FGRQGPICVPQAPFPFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVT 180

Query: 181 VKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKP 240
           VKLGSEVLRGVLYHP+QP PS+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPDQPPPSDLRPLSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRE 300

Query: 301 LKEYKEKMRQATDIHEPNYSKHGE 325
           LKEYKEKMR  T++   NYSKHG+
Sbjct: 301 LKEYKEKMRLGTEVDGANYSKHGD 324

[Close]

BLAST of Moc11g00880 vs. TAIR 10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 403.7 bits (1036), Expect = 1.7e-112
Identity = 209/305 (68.52%), Postives = 245/305 (80.33%), Query Frame = 0


Query: 16  KHYPRALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGH 75
           K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+
Sbjct: 25  KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGY 84

Query: 76  EKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFS 135
           EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HYEQV+LF+ +GP+  P A F 
Sbjct: 85  EKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATF- 144

Query: 136 FGSPSSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVL 195
             +PS+  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L
Sbjct: 145 HANPSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEIL 204

Query: 196 RGVLYHPEQPSPSNLRPQSI--NAIVPY--TGGRLRHSGRRHRRSRRKGDPNHPKPNRSG 255
            GVLYH  QP PS+  P ++  NA+VPY  TG R R  G+R RRSRR+ DPN+PKPNRSG
Sbjct: 205 NGVLYHSAQPGPSS-SPTAVLNNAVVPYVETGRRRRRLGKR-RRSRRREDPNYPKPNRSG 264

Query: 256 YNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEY 310
           YNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EER VYQ+IGLKDKERY+REL EY
Sbjct: 265 YNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEY 324

[Close]

BLAST of Moc11g00880 vs. TAIR 10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 264.2 bits (674), Expect = 1.6e-70
Identity = 151/358 (42.18%), Postives = 217/358 (60.61%), Query Frame = 0


Query: 23  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E+
Sbjct: 23  ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82

Query: 83  KWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSS- 142
           +W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F   G I     P S  SPS+ 
Sbjct: 83  RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQI----PPDSMQSPSAR 142

Query: 143 ----------ENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGS 202
                       EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GS
Sbjct: 143 PCFIQGAIRPSQELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGS 202

Query: 203 EVLRGVLYH-PEQPSPSNLRPQSINAIVPYT-----------GGRLRHSGRRHRRSRRKG 262
           E L+GVLY    Q + S   PQ  + ++P T           GG  +   RR +   ++ 
Sbjct: 203 EQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRR 262

Query: 263 DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKD 322
           DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+ +YQ   ++D
Sbjct: 263 DPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMED 322

Query: 323 KERYKRELKEYKEKMRQATDIHEPNYSKHGETPIRTRGCKKSIGLMFYEDLPSKEDEE 352
           KERY+ E+++Y+EK +    I           P++ R  ++++  M   DLP  E EE
Sbjct: 323 KERYRTEMEDYREKKKNGQLI-------SNAVPLQQRLPEQNVD-MAEADLPIDEVEE 368

[Close]

BLAST of Moc11g00880 vs. TAIR 10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-56
Identity = 127/286 (44.41%), Postives = 173/286 (60.49%), Query Frame = 0


Query: 23  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++
Sbjct: 34  AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93

Query: 83  KWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSE 142
           KW+EV   F F  T TSASFVLRK+YL  L+  E VY   +  P+   Q+     +  + 
Sbjct: 94  KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--PVSSLQS-----TDEAL 153

Query: 143 NELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPS 202
             LA     P+     P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P+ PS S
Sbjct: 154 KSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQS 213

Query: 203 NLRPQSINAIVPYTGGRLRHSGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSL 262
               ++ +AIV       + S RRHR+  +    D   PK +RSGYNFFFAE++ +LK  
Sbjct: 214 QQTMETPSAIV-------QSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPE 273

Query: 263 YPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYK 306
           Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Sbjct: 274 YHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305

[Close]

BLAST of Moc11g00880 vs. TAIR 10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-44
Identity = 104/286 (36.36%), Postives = 155/286 (54.20%), Query Frame = 0


Query: 25  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKW 84
           + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RGG EKV+ +++ 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 85  REVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENE 144
           +EV   F F  T T+++FVLRK YL +L+ +E +Y F         QAP S      +  
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYF---------QAPLSTFWEKEKAL 149

Query: 145 LALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSN 204
             L+E +      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH    SP  
Sbjct: 150 KLLIEKSANRDKDSQELKPGTVITGIIDGKFESGYLISTKVGSEKLKGMLYH---ISPET 209

Query: 205 LRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN 264
            R                  G++  +S +      PK  R+GYNFF AE+  ++K+    
Sbjct: 210 KR------------------GKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAG 269

Query: 265 REREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKM 309
           ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+  M
Sbjct: 270 QKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLM 285

[Close]

BLAST of Moc11g00880 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 47.8 bits (112), Expect = 2.3e-05
Identity = 27/90 (30.00%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 225 RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEER 284
           + ++ ++K DPN PK   SG+ FF   +   +K  +P     E  K++G+ W  +S +++
Sbjct: 549 KRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDK 608

Query: 285 TVYQNIGLKDKERYKRELKEYKEKMRQATD 314
             Y+     DK+RYK E+ +YK       D
Sbjct: 609 EPYEAKAQVDKQRYKDEISDYKNPQPMNVD 638

The following BLAST results are available for this feature:

BLAST of Moc11g00880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140929.1	2.3e-188	100.00	high mobility group B protein 9 [Momordica charantia]	[more]
XP_008452910.1	3.7e-175	92.90	PREDICTED: high mobility group B protein 9 [Cucumis melo] >ADN34129.1 high mobil...	[more]
XP_038899499.1	6.4e-175	93.52	high mobility group B protein 9-like [Benincasa hispida]	[more]
XP_004145526.1	5.4e-174	91.98	high mobility group B protein 9 [Cucumis sativus] >KGN55473.1 hypothetical prote...	[more]
XP_023535855.1	6.2e-170	91.08	high mobility group B protein 9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc11g00880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGS2	2.3e-111	68.52	High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV...	[more]
Q9MAT6	2.2e-69	42.18	High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ...	[more]
Q9LTT3	1.8e-55	44.41	High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ...	[more]
Q9LG02	4.6e-43	36.36	Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG...	[more]
Q68CP9	1.3e-13	40.20	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of Moc11g00880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CH52	1.1e-188	100.00	high mobility group B protein 9 OS=Momordica charantia OX=3673 GN=LOC111011470 P...	[more]
A0A5A7VAK3	1.8e-175	92.90	High mobility group B protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
E5GCD0	1.8e-175	92.90	High mobility group family OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BUE9	1.8e-175	92.90	high mobility group B protein 9 OS=Cucumis melo OX=3656 GN=LOC103493788 PE=4 SV=...	[more]
A0A0A0L181	2.6e-174	91.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652850 PE=4 SV=1	[more]

BLAST of Moc11g00880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76110.1	1.7e-112	68.52	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G04880.1	1.6e-70	42.18	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G13350.1	1.3e-56	44.41	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G55650.1	3.3e-44	36.36	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G28730.1	2.3e-05	30.00	high mobility group	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 294..314
None	No IPR available	SMART	SM01014	ARID_2	coord: 26..116 e-value: 2.3E-30 score: 116.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..244
None	No IPR available	PANTHER	PTHR46691	HIGH MOBILITY GROUP B PROTEIN 9	coord: 11..315
None	No IPR available	PANTHER	PTHR46691:SF1	HIGH MOBILITY GROUP B PROTEIN 9	coord: 11..315
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 238..302 e-value: 3.57924E-18 score: 76.1273
None	No IPR available	CDD	cd16872	ARID_HMGB9-like	coord: 31..116 e-value: 2.02544E-45 score: 148.952
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 237..306 e-value: 8.3E-14 score: 61.9
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 238..305 e-value: 7.9E-12 score: 45.4
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 238..305 score: 14.664033
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 30..121 e-value: 3.4E-31 score: 119.6
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 35..116 e-value: 3.8E-18 score: 65.9
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 29..120 score: 25.015818
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 222..317 e-value: 3.7E-20 score: 74.1
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 235..309
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 20..126 e-value: 3.6E-26 score: 93.1
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 25..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g00880.1	Moc11g00880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010197	polar nucleus fusion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding