Moc11g00250 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g00250
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	SWI/SNF complex subunit SWI3B
Location	chr11: 214635 .. 219280 (-)
RNA-Seq Expression	Moc11g00250
Synteny	Moc11g00250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTAATTCACCAGTCCAAGAGCCTTCCACGGATACTTCCGCTAAACAATCAGCGCCTGCGCCATCGCCATCGCCATCGCCATGGGCAGCGCCCTCCCCAGCTCCTGCCACCCCTCCTGTTAAAATCGAGACTTCTCCGTCCGACTCCGCCCAGACTCCCTCCACCGTCCCCCCCGCCACCCCCCGCCACCAAGACCTCCCTCCCGACCTAATTCATCTTCCCAGCTACTCCAGTAAGTATTCTTTCTTCCTCCATATTCTGCAACCATGTATTTTCGTTGCACGCCCTGCTTCTTACTTTTGCATTTTACTCTTCGCTTGATTTTGCGTGCTCATTTCTCGCCCAGGATGGTTCTCCTGGAACGGAATTCACGAGTGCGAGGTTCGCTTCCTTCCGGAGTTCTTTGATTCACGATCCCCCTCAAAAAATCCTAGGGTTTATAAGTACCTTAGAAATTCTATTGTCAAAAATTTCAGAGAAACCCCTTCCAAGAAGATCACCTTTACTGATGTCCGAAAGACGCTCGTTGCGGATGTAGGATCCATTCGTAGGGTTTTCGATTTCCTCGAGGCTTGGGGTCTTATTAATTACTCGCCGTCCGCGCTGAACAAACCGCTCAAGTGGGAGGACCGGGACTCAAAGTCCAATGCGTCCGTCTCGCTCAGCGGTGAAGCTGGAGGTAGTTCCGCAGATTCCTCGGCTTCAAAAGAGGCTTCTAGGAGAGTATGCAGCGGTTGCAAGTCTATTTGTTCCATTGCTTGCTTTGCTTGCGACAAGGTTCGTAGCTACTTGCACTGTGAACGTATAATGTTTTCTTGTTTTCGCTAATTAGTTTGTGTTCTGCTATTTCCTCGGCGAAGTCTAACTTCTAAGCATTATCGAGGCGAGTCTTTGGTATATATTAATTCTAGGATTTCACTTTACTGTAAGCGATCGCATTAAGATTATATTTGTAGTTGAAACTTCTAATCTTTGGGAGGGAGTTTTGCTTAGTTTATTTAGAGGGTACCGGGTTAGCTGGATAGGTTTATTTGATTAAATAATCTTGAAATCAACTCTTTTTCATTCAGTTCGTTGTATAGCAAGTTTATAAAAGCGCAATGCACATAATTTTTTTTTTTGGTTTTATATTGTCTTTTTTTTTGGTTCTATATTGTCAAAAGCCTTCATTAGGGTTTTTATCTGTCCATAGTTGCATATCTACCACTTTAGCAAGCAAAATCCTCTGTGATCTCTGTTTATTTTCTTAATCTTCCTGGTTAAATGTCTCGAGGACATTTACTGAGTCGTTCTACTTGATAGGTGTCCGACCAGTTTTAGTTGCTTGATGAATTTGGAACTTGGATAGAAATGTATATTCTAAATAGGCATTAAATGGATTGATATAATTTAATTGATTGGAATTAATACGATGGTTGTTGTTCTGTACAGTTTGATTTAACGCTTTGTGCAAGGTGCTATGTTCGTGGTAACTATCGAGTTGGTGTTAGTTCTTCAGATTTTCGACGGGTTGAGATCAATGAAGACACACGAACTGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGATGCATTATGGTGATGACTGGAAAAAGGTTGCACAGCATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTCTGGGGGAGCAATTTATTGGTTATCCAGATTCTGGAAATATTGACAACAAGTATACTGCAGTAAAGGATCATGTTAGTGCTGATCTTGTATTGGAGAATGCTGGTACGTCTCTTCCTAGTAAAAGAATCTGTCTCTCACCTCTGGCAGATGCAAGTAATCCCATAATGGCTCAGGTTAGGATTGGTTTTAATCCCTTCTTTTAGCTCGCATTAGTTGCGTATATGATTGTAATTCAAACAACAATTTGCATTATGGAAGACCCTGATCCATGCAAAAAGAACTACGTATTTGAGGTCTGATTTGCATATTTGGGTTAGTTTGTCTTGACCTGAACCTATTTTAAATATCTCATGAAGCACCTTATAGTTTGACAAAAAACCAACATGGACAGGCTCATACAATTCAACCAAACTAAAACAGTTAAGATTGGGTTTGTCAGAATTTTTTAGCGGACTATTCTTTTGCATTACATATATAGCGTCCATTTAAACTGCCTGAAACTGGTATTGGTCAATTTAAACTGCTTATTGTTTTCTATTGCATATCATCATTGGTTAGAGATATCATCATGTAATTGGTATTTTATACACTCTCAGGCTGCCTTTTTGTCGTCTTTGGTGGGTGTTGAGGTTGCAGAAGCAGCTGCCCATGCAGCTGTGATTGAACTTTCTGATACGGGTTTTGGAGGAGATGGGGAAAGTGTCCCGGCTGTTGCTAGGGATACAGGGGAGCAAGGTATTGAGCTTTGTTTCTGTTAAAGCAATTTCAAATAATTATTCCTAGGTTATTGAAGTTGAAAATGGTGATAGTTTGGCTCCAGTTTGAACTTTACTATTTCTTTCTTTTGTAATTTGCATTCTAAATATATTTTTATATCTCAGGTGAGATTTCAAGAGTTCTTTTTTTTTTTTTTACAAATCACCCCCAGTATACAAAAACTAGTCCTCACAAGAATCCACTCCAGCCTGAGTTAGTTAGAACTTAGAAGGGAAATAATTACGAAAATATTTTTAAAAGGAACGCATATAAGAGATGCAAATTTAACCAAACAAAAAATGTCAACTCAAGTCTTTCTTTTAAAAAATTTATGATTTCTTCCTAACCACACCCCCTTAGTAATAGCTTTAACTAAAGCCCCAAGTAATAGCTTTAACCAACCCCCTTAGTAATAGCTCTAACTGCATTACATTGGAATCTTTTTTTTTCTCTCTGGCCTGCACAATAGTTGTTTGAGATTCCTCTTTACATTGCCATCTCAACACTAGCTACATATAAAAGCTTAGAATGAATCATACGAACAGTTATGAGCAAAATGATACCGAAATAAAAAATGTAGCTTCCTCCTCCAATCGTATTCATGGTATTGGGCCTTATCCTACTACTTCATAAAGAGATTTTGTACGCTCCAATGCTAACTCTAGGACATGACTGGAGTTTTCATTTTTATTAAGCTTTCTACCTAGAGGCGGAAATCCAGAATTTTGGTGAAATCTTTCCCCATTTGATCTGTAAATTACACAAATGCTTGGGTTTGAGAGTAGATTTAGGACATCGTATTTACATTTTTCAGTCGTTCTCAATCATTGAAGAGTTAACATCCAGATGAAGAACTTCACTTTCTTCCGCCCTGATTTCCTTTTCAAATAGCTTTATTTTCTTTCATGGAAGAAACTGAGATTAATTATACCCAATTTTAACTTTCTACTGTACCATCTAGTTTCATCTACTACGCTGTATCTGCTAGATAGGATTATCTCCCTAATGGGGAATGTCTAGACTCATTTCTCCAGTAAAGAGGCATTTCTTTCCTGGAGTTCCATATGCATGCCTAAGCCTCTCTTTTCCTGGTGGTGATTTGATGCTCCTTCCCACAGAAATCTATTTCTTTCTATTATTGTTGCAACTTGGAATTTTGAACACAAACATAAACTATTTGTCTATACTGAACTATACTGACTATGGGAGGGATGTTGAAAGTTTCCAGAAATTCATTGTTATCCGATTACCTCCCAGATGCGCCAGTTAGTTTTGAAGTTCATTTCACTTTTATTTCTTTATTATCTTGTATTCATTTTAATGTGTGAAATGAAGATCAATTTTTTTAGAAAAATGAAAATTTCAACTTTTGCTTGTTATTTTTCGTGTTAATCTATCTACAGTTTATTATACGTTATGTCTTAAAATCTGTTGCAATATTCACTTTTGTAATCAGATAGGTTTGGAGTGTTTGTTATGTAGGCGACCAAAAATTGTCATATAATTTTTTGCCTCTACTCGTCCCTGTTCATGAGAGATGCAGTATCAAGTTCCATTTGGATGTTTATAAGTTGAAAATCTGAGTGGACCTAGAATTTCTACCATCATGTACTTACGGCAACTTGATAAAAGGTCTATAGACCATTGACGTACAAAACATTTTGGAGATAGAGCCTAGCACGTGCTCTTGTCATTATATAGCTAATATGTACAATAATAAAACATCGGTTGGTGTGAGTGTGATCTGCTGAGTGCAGGATATTTGTTTTTGAGGCTTGGGACTGTCACATCTCTTCTGTTTTTGAATCAGGAAACGAGGTTGCATCCAGTGGAGGCAGCAGTGGTACGAGCACATTAAGGGGGTCTTCTGTGGATGCCAATTCACAGATTAAGGAAGAAGAGGTGGAGGTGGAGAGAGCAATATCTCATATTTTAGACGTCGAGGTAGCTACTTTGAATTCTGTTGTAGTTGGTATGTGGAGAAGTTTGTGTTTATTTTGCTAATATTGGAAATTATTGGCAATAGATGAAAGAGATTGTAGATAAGATTGTTGGTTTCGAGGAGCTAGACTTGCAGATGGAGAAGGAACTTGGGCAATTAGATCAAATGAAAAGCATGCTTTTTGTTGATCAACTCAATCTCTTATTCAATAGAGGTTGTATCCCTGGAACCACCGTCCAAGACAAGGATGGCAAGAATGTTAGAACGTGTTGA

mRNA sequence

ATGGCGACTAATTCACCAGTCCAAGAGCCTTCCACGGATACTTCCGCTAAACAATCAGCGCCTGCGCCATCGCCATCGCCATCGCCATGGGCAGCGCCCTCCCCAGCTCCTGCCACCCCTCCTGTTAAAATCGAGACTTCTCCGTCCGACTCCGCCCAGACTCCCTCCACCGTCCCCCCCGCCACCCCCCGCCACCAAGACCTCCCTCCCGACCTAATTCATCTTCCCAGCTACTCCAGATGGTTCTCCTGGAACGGAATTCACGAGTGCGAGGTTCGCTTCCTTCCGGAGTTCTTTGATTCACGATCCCCCTCAAAAAATCCTAGGGTTTATAAGTACCTTAGAAATTCTATTGTCAAAAATTTCAGAGAAACCCCTTCCAAGAAGATCACCTTTACTGATGTCCGAAAGACGCTCGTTGCGGATGTAGGATCCATTCGTAGGGTTTTCGATTTCCTCGAGGCTTGGGGTCTTATTAATTACTCGCCGTCCGCGCTGAACAAACCGCTCAAGTGGGAGGACCGGGACTCAAAGTCCAATGCGTCCGTCTCGCTCAGCGGTGAAGCTGGAGGTAGTTCCGCAGATTCCTCGGCTTCAAAAGAGGCTTCTAGGAGAGTATGCAGCGGTTGCAAGTCTATTTGTTCCATTGCTTGCTTTGCTTGCGACAAGTTTGATTTAACGCTTTGTGCAAGGTGCTATGTTCGTGGTAACTATCGAGTTGGTGTTAGTTCTTCAGATTTTCGACGGGTTGAGATCAATGAAGACACACGAACTGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGATGCATTATGGTGATGACTGGAAAAAGGTTGCACAGCATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTCTGGGGGAGCAATTTATTGGTTATCCAGATTCTGGAAATATTGACAACAAGTATACTGCAGTAAAGGATCATGTTAGTGCTGATCTTGTATTGGAGAATGCTGGTACGTCTCTTCCTAGTAAAAGAATCTGTCTCTCACCTCTGGCAGATGCAAGTAATCCCATAATGGCTCAGGCTGCCTTTTTGTCGTCTTTGGTGGGTGTTGAGGTTGCAGAAGCAGCTGCCCATGCAGCTGTGATTGAACTTTCTGATACGGGTTTTGGAGGAGATGGGGAAAGTGTCCCGGCTGTTGCTAGGGATACAGGGGAGCAAGGAAACGAGGTTGCATCCAGTGGAGGCAGCAGTGGTACGAGCACATTAAGGGGGTCTTCTGTGGATGCCAATTCACAGATTAAGGAAGAAGAGGTGGAGGTGGAGAGAGCAATATCTCATATTTTAGACGTCGAGATGAAAGAGATTGTAGATAAGATTGTTGGTTTCGAGGAGCTAGACTTGCAGATGGAGAAGGAACTTGGGCAATTAGATCAAATGAAAAGCATGCTTTTTGTTGATCAACTCAATCTCTTATTCAATAGAGGTTGTATCCCTGGAACCACCGTCCAAGACAAGGATGGCAAGAATGTTAGAACGTGTTGA

Coding sequence (CDS)

ATGGCGACTAATTCACCAGTCCAAGAGCCTTCCACGGATACTTCCGCTAAACAATCAGCGCCTGCGCCATCGCCATCGCCATCGCCATGGGCAGCGCCCTCCCCAGCTCCTGCCACCCCTCCTGTTAAAATCGAGACTTCTCCGTCCGACTCCGCCCAGACTCCCTCCACCGTCCCCCCCGCCACCCCCCGCCACCAAGACCTCCCTCCCGACCTAATTCATCTTCCCAGCTACTCCAGATGGTTCTCCTGGAACGGAATTCACGAGTGCGAGGTTCGCTTCCTTCCGGAGTTCTTTGATTCACGATCCCCCTCAAAAAATCCTAGGGTTTATAAGTACCTTAGAAATTCTATTGTCAAAAATTTCAGAGAAACCCCTTCCAAGAAGATCACCTTTACTGATGTCCGAAAGACGCTCGTTGCGGATGTAGGATCCATTCGTAGGGTTTTCGATTTCCTCGAGGCTTGGGGTCTTATTAATTACTCGCCGTCCGCGCTGAACAAACCGCTCAAGTGGGAGGACCGGGACTCAAAGTCCAATGCGTCCGTCTCGCTCAGCGGTGAAGCTGGAGGTAGTTCCGCAGATTCCTCGGCTTCAAAAGAGGCTTCTAGGAGAGTATGCAGCGGTTGCAAGTCTATTTGTTCCATTGCTTGCTTTGCTTGCGACAAGTTTGATTTAACGCTTTGTGCAAGGTGCTATGTTCGTGGTAACTATCGAGTTGGTGTTAGTTCTTCAGATTTTCGACGGGTTGAGATCAATGAAGACACACGAACTGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGATGCATTATGGTGATGACTGGAAAAAGGTTGCACAGCATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTCTGGGGGAGCAATTTATTGGTTATCCAGATTCTGGAAATATTGACAACAAGTATACTGCAGTAAAGGATCATGTTAGTGCTGATCTTGTATTGGAGAATGCTGGTACGTCTCTTCCTAGTAAAAGAATCTGTCTCTCACCTCTGGCAGATGCAAGTAATCCCATAATGGCTCAGGCTGCCTTTTTGTCGTCTTTGGTGGGTGTTGAGGTTGCAGAAGCAGCTGCCCATGCAGCTGTGATTGAACTTTCTGATACGGGTTTTGGAGGAGATGGGGAAAGTGTCCCGGCTGTTGCTAGGGATACAGGGGAGCAAGGAAACGAGGTTGCATCCAGTGGAGGCAGCAGTGGTACGAGCACATTAAGGGGGTCTTCTGTGGATGCCAATTCACAGATTAAGGAAGAAGAGGTGGAGGTGGAGAGAGCAATATCTCATATTTTAGACGTCGAGATGAAAGAGATTGTAGATAAGATTGTTGGTTTCGAGGAGCTAGACTTGCAGATGGAGAAGGAACTTGGGCAATTAGATCAAATGAAAAGCATGCTTTTTGTTGATCAACTCAATCTCTTATTCAATAGAGGTTGTATCCCTGGAACCACCGTCCAAGACAAGGATGGCAAGAATGTTAGAACGTGTTGA

Protein sequence

MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPPATPRHQDLPPDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRTC

Homology

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BLAST of Moc11g00250 vs. NCBI nr
Match: XP_023515051.1 (SWI/SNF complex subunit SWI3B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 766.9 bits (1979), Expect = 1.1e-217
Identity = 408/516 (79.07%), Postives = 447/516 (86.63%), Query Frame = 0


Query: 1   MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPP 60
           MA N PVQ+P TD SAKQ      P+PS    PSP   TPPVKI+T  SDS +TP+ VP 
Sbjct: 1   MAANLPVQDPPTDASAKQ------PTPS----PSPTLVTPPVKIDTPSSDSGKTPAAVPA 60

Query: 61  ATPRHQDLP----PDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120
           +TPR +DLP    PD +HLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN
Sbjct: 61  STPRPEDLPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120

Query: 121 SIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRD 180
           +IVKNFRE PSKKITFTDVRKTLVADVGSIRRVFDFLEAWGL+NYSPSALNKPLKWEDRD
Sbjct: 121 AIVKNFRECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRD 180

Query: 181 SKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240
           SKSN+S S +GE GGSSADSSA K+AS+RVCSGCKSICSIACFACDKFDLTLCARCYVRG
Sbjct: 181 SKSNSSASHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240

Query: 241 NYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVA 300
           NYRVGVSSSDFRRVEIN++TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVA
Sbjct: 241 NYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVA 300

Query: 301 HFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNP 360
           HFVKLPLGEQF+GYPDSGN+  + T VKDH SADL LE+  T L SKRI LSPLADASNP
Sbjct: 301 HFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNP 360

Query: 361 IMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGS 420
           IMAQAAFLSSLVGVEVAEAAAHAAV++LSD GFGGDGE   AVAR+ G+QGN V S GGS
Sbjct: 361 IMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNNVVSCGGS 420

Query: 421 SGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQL 480
           +  S+   SSVDANSQI++EEV VE+AISHILDV+MKE VDK+   EE+DLQMEKE  QL
Sbjct: 421 TARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQL 480

Query: 481 DQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRT 513
           DQMKSMLFVDQLNLLF++GCIP  T++DK+ KN+ T
Sbjct: 481 DQMKSMLFVDQLNLLFHKGCIP--TIEDKNSKNLST 501

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BLAST of Moc11g00250 vs. NCBI nr
Match: KAG6591190.1 (SWI/SNF complex subunit SWI3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 765.4 bits (1975), Expect = 3.2e-217
Identity = 407/516 (78.88%), Postives = 446/516 (86.43%), Query Frame = 0


Query: 1   MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPP 60
           MA N PVQ+P TD SAKQ      P+PS    PSP   TPPVKI+T  SDS +TP+ VP 
Sbjct: 1   MAANLPVQDPPTDASAKQ------PTPS----PSPTLVTPPVKIDTPSSDSGKTPAAVPA 60

Query: 61  ATPRHQDLP----PDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120
            TPR +DLP    PD +HLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN
Sbjct: 61  PTPRPEDLPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120

Query: 121 SIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRD 180
           +IVKNFRE PSKKITFTDVRKTLVADVGSIRRVFDFLEAWGL+NYSPSALNKPLKWEDRD
Sbjct: 121 AIVKNFRECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRD 180

Query: 181 SKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240
           SKSN+S S +GE GGSSADS+A K+AS+RVCSGCKSICSIACFACDKFDLTLCARCYVRG
Sbjct: 181 SKSNSSASHTGEPGGSSADSAAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240

Query: 241 NYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVA 300
           NYRVGVSSSDFRRVEIN++TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVA
Sbjct: 241 NYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVA 300

Query: 301 HFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNP 360
           HFVKLPLGEQF+GYPDSGN+  + T VKDH SADL LE+  T L SKRI LSPLADASNP
Sbjct: 301 HFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNP 360

Query: 361 IMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGS 420
           IMAQAAFLSSLVGVEVAEAAAHAAV++LSD GFGGDGE   AVAR+ G+QGN+V S GGS
Sbjct: 361 IMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGS 420

Query: 421 SGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQL 480
           +  S+   SSVDANSQI++EEV VE+AISHILDV+MKE VDK+   EE+DLQMEKE  QL
Sbjct: 421 TARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQL 480

Query: 481 DQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRT 513
           DQMKSMLFVDQLNLLF +GCIP  T++DK+ KN+ T
Sbjct: 481 DQMKSMLFVDQLNLLFRKGCIP--TIEDKNSKNLST 501

[Close]

BLAST of Moc11g00250 vs. NCBI nr
Match: XP_022936036.1 (SWI/SNF complex subunit SWI3B [Cucurbita moschata])

HSP 1 Score: 760.4 bits (1962), Expect = 1.0e-215
Identity = 404/516 (78.29%), Postives = 445/516 (86.24%), Query Frame = 0


Query: 1   MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPP 60
           MA N PVQ+P TD SAK       P+PS    PSP   TPPVKI+T  SDS +TP+ VP 
Sbjct: 1   MAANLPVQDPPTDASAKH------PTPS----PSPTLVTPPVKIDTPSSDSGKTPAAVPA 60

Query: 61  ATPRHQDLP----PDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120
            TPR +DLP    PD +HLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN
Sbjct: 61  PTPRPEDLPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120

Query: 121 SIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRD 180
           +IVKNFRE PSKKITFT+VRKTLVADVGSIRRVFDFLEAWGL+NYSPSALNKPLKWEDRD
Sbjct: 121 AIVKNFRECPSKKITFTEVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRD 180

Query: 181 SKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240
           SKSN+S S +GE GGSSADS+A K+AS+RVCSGCKSICSIACFACDKFDLTLCARCYVRG
Sbjct: 181 SKSNSSASHTGEPGGSSADSAAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240

Query: 241 NYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVA 300
           NYRVGVSSSDFRRVEIN++TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVA
Sbjct: 241 NYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVA 300

Query: 301 HFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNP 360
           HFVKLPLGEQF+GYPDSGN+  + T VKDH SADL LE+  T L SKRI LSPLADASNP
Sbjct: 301 HFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNP 360

Query: 361 IMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGS 420
           IMAQAAFLSSLVGVEVAEAAAHAAV++LSD GFGGDGE   AVAR+ G+QGN+V S GGS
Sbjct: 361 IMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGS 420

Query: 421 SGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQL 480
           +  S+   SSVDANSQI++EEV VE+AISHILDV++KE VDK+   EE+DLQMEKE  QL
Sbjct: 421 TARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQIKEAVDKLDRLEEVDLQMEKEFKQL 480

Query: 481 DQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRT 513
           DQMKSMLFVDQLNLLF +GCIP  T++DK+ KN+ T
Sbjct: 481 DQMKSMLFVDQLNLLFRKGCIP--TIEDKNSKNLST 501

[Close]

BLAST of Moc11g00250 vs. NCBI nr
Match: XP_022975356.1 (SWI/SNF complex subunit SWI3B [Cucurbita maxima])

HSP 1 Score: 760.0 bits (1961), Expect = 1.3e-215
Identity = 405/516 (78.49%), Postives = 446/516 (86.43%), Query Frame = 0


Query: 1   MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPP 60
           MA N PVQ+P TD SAKQ      P+PS    PSP   TPPVKI+T  SDS +TP+ VP 
Sbjct: 1   MAANLPVQDPPTDASAKQ------PTPS----PSPTLVTPPVKIDTPSSDSGKTPAAVPA 60

Query: 61  ATPRHQDLP----PDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120
           +TPR +DLP    PD +HLPSYSRWFSWNGIHECEVRFLPEFF+SRSPSKNPRVYKYLRN
Sbjct: 61  STPRPEDLPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRN 120

Query: 121 SIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRD 180
           +IVKNFRE PSKKITFTDVRKTLVADVGSIRRVFDFLEAWGL+NYSPS LNKPLKWEDRD
Sbjct: 121 AIVKNFRECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRD 180

Query: 181 SKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240
           SKSN+S S +GE GGSSADSSA K+AS+RVCSGCKSICSIACFACDKFDLTLCARCYVRG
Sbjct: 181 SKSNSSASHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240

Query: 241 NYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVA 300
           NYRVGVSSSDFRRVEIN++TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVA
Sbjct: 241 NYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVA 300

Query: 301 HFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNP 360
           HFVKLPLGEQF+GYPDSGN+  + T VKDH SADL LE+  T L SKRI LSPLADASNP
Sbjct: 301 HFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNP 360

Query: 361 IMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGS 420
           IMAQAAFLSSLVGVEVAEAAAHAAV++LSD GFGGDGE   AVAR+ G+QGN+V S GGS
Sbjct: 361 IMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGS 420

Query: 421 SGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQL 480
           +  S+   SSVDANSQI++EEV VE+AISHILDV+MKE VDK+   EE+DLQMEKE  QL
Sbjct: 421 TARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQL 480

Query: 481 DQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRT 513
           DQMKSMLFVDQLNLLF++G IP  T++DK+ KN+ T
Sbjct: 481 DQMKSMLFVDQLNLLFHKGYIP--TIEDKNSKNLST 501

[Close]

BLAST of Moc11g00250 vs. NCBI nr
Match: XP_022137807.1 (SWI/SNF complex subunit SWI3B [Momordica charantia])

HSP 1 Score: 756.5 bits (1952), Expect = 1.5e-214
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 123 RETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNAS 182
           RETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNAS
Sbjct: 51  RETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNAS 110

Query: 183 VSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 242
           VSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV
Sbjct: 111 VSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 170

Query: 243 SSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP 302
           SSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP
Sbjct: 171 SSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP 230

Query: 303 LGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAA 362
           LGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAA
Sbjct: 231 LGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAA 290

Query: 363 FLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTL 422
           FLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTL
Sbjct: 291 FLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTL 350

Query: 423 RGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSM 482
           RGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSM
Sbjct: 351 RGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSM 410

Query: 483 LFVDQLNLLFNRGCIPGTTVQDKDGKNVRTC 514
           LFVDQLNLLFNRGCIPGTTVQDKDGKNVRTC
Sbjct: 411 LFVDQLNLLFNRGCIPGTTVQDKDGKNVRTC 441

[Close]

BLAST of Moc11g00250 vs. ExPASy Swiss-Prot
Match: Q84JG2 (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana OX=3702 GN=SWI3B PE=1 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.5e-124
Identity = 253/470 (53.83%), Postives = 336/470 (71.49%), Query Frame = 0


Query: 26  SPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPPATPRHQDLPPDLIHLPSYSRWFSWN 85
           +P P  +    P+TP +   TS   +A + S   P++    D+  D IH+PSYS WFSW 
Sbjct: 5   APDPGGSGEILPSTPSLSETTSGGAAAASKSAQLPSS--SSDI--DNIHVPSYSSWFSWT 64

Query: 86  GIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRETPSKKITFTDVRKTLVADVGS 145
            I++CEVR LPEFFDSRS SKNP+ Y YLRNSI+K +R+   +KI+FTDVR+TLV+DV S
Sbjct: 65  DINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVS 124

Query: 146 IRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNASVSLSGEAGGSSADSSAS--KEAS 205
           IRRVFDFL++WGLINY+ SA  KPLKWE+++         +G++ G +A   A+  KE +
Sbjct: 125 IRRVFDFLDSWGLINYNSSASAKPLKWEEKE---------AGKSAGDAASEPATTVKETA 184

Query: 206 RRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINEDTRTDWTDK 265
           +R C+GCK+ICSIACFACDK+DLTLCARCYVR NYRVG++SS+F+RVEI+E+++ +W+DK
Sbjct: 185 KRNCNGCKAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEESKPEWSDK 244

Query: 266 ETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFIGYPDSGNIDNKYTAV 325
           E L LLEA+MHYGDDWKKVA HV GRTE++CV+ FVKLP GEQF+   DS +    +  +
Sbjct: 245 EILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDSEDGLEMFDQI 304

Query: 326 KDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVIE 385
           KD    +    +   S P+KRI L+PLADASNPIMAQAAFLS+L G  VAEAAA AAV  
Sbjct: 305 KDSDIPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAGTNVAEAAARAAVRA 364

Query: 386 LSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTLRGSSVDANSQIKEEEVEVERA 445
           LSD  +  D  +    +RD   Q    ASSG ++   + R +  DA S I++EE EVE A
Sbjct: 365 LSDVDYEADKNA----SRDPNRQDANAASSGETTRNESER-AWADAKSLIEKEEHEVEGA 424

Query: 446 ISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSMLFVDQLNLLFN 494
           I   ++VEMK+I D+IV FE+LDL+ME+   QL++++++LFVDQLN+ F+
Sbjct: 425 IKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFH 456

[Close]

BLAST of Moc11g00250 vs. ExPASy Swiss-Prot
Match: Q0JCC3 (SWI/SNF complex subunit SWI3A homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SWI3A PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.1e-38
Identity = 153/558 (27.42%), Postives = 248/558 (44.44%), Query Frame = 0


Query: 39  TPPVKIETSPSDSAQTPSTVPPATPRHQDLPPDLIHLPSYSRWFSWNGIHECEVRFLPEF 98
           +PPV    S  D        PP  P     P +L  +P+ S WF W+ IHE E R LPEF
Sbjct: 2   SPPVAGAASSGDG-------PPGRP-----PRELYTIPASSGWFQWDEIHETERRALPEF 61

Query: 99  FDSR------SPSKNPRVYKYLRNSIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDF 158
           F         + S+NPR+Y+  R+ I+  +RE  S+++TFT+VRK LV DV  +R++F F
Sbjct: 62  FGGAGGSGFGTASRNPRIYREYRDYIISRYREDTSRRLTFTEVRKALVGDVTLLRKLFAF 121

Query: 159 LEAWGLINYSPSALNKPLKWEDRDSKSNASVS---------------LSGEAGGSSADS- 218
           L++ GLIN+S S      + + R +++ A V                 + E GG   ++ 
Sbjct: 122 LDSSGLINFSASPSRPEAQQQQRQTEAEAVVEAPVGLQVTPRPPPSYFAEEKGGGGNENG 181

Query: 219 ------SASKEASRRVCSGCKSICSIACFACD-------KFDLTLCARCYVRGNYR--VG 278
                 ++  +       G   IC +    C        K    +C++CY   + +    
Sbjct: 182 FRLPPLTSYSDVFGEWAPGMAPICGLCGMECRDGNAQILKDGFKVCSKCYANNDNKGEAN 241

Query: 279 VSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKL 338
           +   D ++  I+  + + WTD ETL LLE ++ +GDDW  +AQHV  + + EC+A  ++L
Sbjct: 242 IHPGD-KKERIDNHSSSAWTDAETLLLLEGVLKHGDDWDLIAQHVRTKNKSECIARLIQL 301

Query: 339 PLGEQFIGYPDSGNIDNKY----------------------TAVKDHVSADLVLENAGTS 398
           P GE  +G   +G +DN+                       T   D +  D   + A  S
Sbjct: 302 PFGEHMLG-TVNGKLDNRLHKIQTTDGKVNKSTVKESSSQPTETVDDMQIDGNEDGADKS 361

Query: 399 L---PSKRICLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAV-------------IE 458
           +   P+K   L    D +  +M Q A L++    +V  AAA AA+              +
Sbjct: 362 VEEHPTKHRRLFSSIDITVSLMEQLAHLTTSTSPDVVAAAADAAIKALGNENPQARRAFQ 421

Query: 459 LSDTGF----------------GGDGESVPAVARDTGEQGNEVASSG---GSSGTSTLRG 503
           LS+  +                GG    V        +QG    S+     ++  +++  
Sbjct: 422 LSEKEYQTRAFSSNHARQSDDVGGGDRDVEMHGHPDKKQGKMFISTTYQVRAAVATSIGV 481

[Close]

BLAST of Moc11g00250 vs. ExPASy Swiss-Prot
Match: O14470 (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr2 PE=1 SV=3)

HSP 1 Score: 138.7 bits (348), Expect = 1.9e-31
Identity = 127/490 (25.92%), Postives = 215/490 (43.88%), Query Frame = 0


Query: 73  IHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRETPSKKITF 132
           I +PSY+ WF  + IH+ E R  PEFF+ +SP K P +YK  R+ ++ ++R  P++ +T 
Sbjct: 18  IIVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTV 77

Query: 133 TDVRKTLVADVGSIRRVFDFLEAWGLINYS------PSALNKPLKWEDRDSKSNASVSLS 192
           T  R+ LV DV +I RV  FLE WGLINY       P+    P+    +   +   V+  
Sbjct: 78  TACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQAISNTPIVTQE 137

Query: 193 --------GEAGGSSA------------------DSSASKEASR---------RVCSGCK 252
                      GGSS+                  + ++ KE            +VC  C 
Sbjct: 138 MLAQHPPPSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTCG 197

Query: 253 SICSIACF---ACDKFDLTLCARCYVRGNYRVGVSSSDF---RRVEINEDTRTDWTDKET 312
             CS   +      K+D  +C  CY +G +    +SSDF     ++ N D    W+++ET
Sbjct: 198 VNCSQTWYHNLKNKKYD--ICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQET 257

Query: 313 LHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFIGYPDSGNIDNKYTAVKD 372
           L LLEA+  YGDDW ++A HVG RT+ +C+ HF+++P+ + +                + 
Sbjct: 258 LLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPY----------------RQ 317

Query: 373 HVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVIELS 432
            +  D          P K+  L P  +  NP+++   +L+S+V   + E   + +V +  
Sbjct: 318 KLQGDF--------SPFKKGFL-PFDENENPVLSTLTYLASIVQQGMKERKQNESV-KQG 377

Query: 433 DTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTLRGSSVDANSQIKEEEVEVERAIS 492
           +T FG      P            VA     S     +  +   N Q++       R + 
Sbjct: 378 ETSFGNSEFKNPL---------ERVAYYALKSAAQKAKLIAAFENRQLR-------RLVF 437

Query: 493 HILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSMLFVDQLN-----LLFNRGCIPGT 511
            ++  +++++  K+   E+L+     EL +LD     L + +L+     L FN+      
Sbjct: 438 SLIQAQLEKLQLKMKVLEQLEKMCSLELSELDLRGKNLLLSRLSTKKMLLAFNKKLEEAV 463

[Close]

BLAST of Moc11g00250 vs. ExPASy Swiss-Prot
Match: Q6PDG5 (SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 2.5e-31
Identity = 123/423 (29.08%), Postives = 191/423 (45.15%), Query Frame = 0


Query: 65  HQDLPPDLIH---LPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKN 124
           H+D   +  H   +PSY+ WF +N +H  E R LPEFF+ ++ SK P +Y   RN ++  
Sbjct: 413 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 472

Query: 125 FRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNA 184
           +R  P + +T T  R+ L  DV +I RV  FLE WGLINY   A ++P       + S+ 
Sbjct: 473 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPT-SHF 532

Query: 185 SVSLSGEAG------GSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVR 244
            V     +G           SSAS++       G +          D  +  L    Y +
Sbjct: 533 HVLADTPSGLVPLQPKPPQQSSASQQMLNFPEKGKEK-------PADMQNFGLRTDMYTK 592

Query: 245 GNYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECV 304
            N           + +       +WT++ETL LLEAL  Y DDW KV++HVG RT+ EC+
Sbjct: 593 KNVP--------SKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECI 652

Query: 305 AHFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASN 364
            HF++LP+ + +                         LE++  SL        P + + N
Sbjct: 653 LHFLRLPIEDPY-------------------------LEDSEASLGPLAYQPIPFSQSGN 712

Query: 365 PIMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGG 424
           P+M+  AFL+S+V   VA AAA +A+ E S          V A  R   E       +  
Sbjct: 713 PVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP 772

Query: 425 SSG--TSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKEL 477
           + G  +S + G++ D   +I+E   E  R      D E KE  +   G   ++ + ++E+
Sbjct: 773 AFGLESSGIAGTASDEPERIEESGTEEARPEGQAAD-EKKEPKEPREGGGAVEEEAKEEI 793

[Close]

BLAST of Moc11g00250 vs. ExPASy Swiss-Prot
Match: Q8TAQ2 (SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=SMARCC2 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.2e-31
Identity = 117/391 (29.92%), Postives = 179/391 (45.78%), Query Frame = 0


Query: 65  HQDLPPDLIH---LPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKN 124
           H+D   +  H   +PSY+ WF +N +H  E R LPEFF+ ++ SK P +Y   RN ++  
Sbjct: 413 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 472

Query: 125 FRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNA 184
           +R  P + +T T  R+ L  DV +I RV  FLE WGLINY   A ++P       + S+ 
Sbjct: 473 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPT-SHF 532

Query: 185 SVSLSGEAG------GSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVR 244
            V     +G       +   +SAS++       G +          D  +  L    Y +
Sbjct: 533 HVLADTPSGLVPLQPKTPQQTSASQQMLNFPDKGKEK-------PTDMQNFGLRTDMYTK 592

Query: 245 GNYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECV 304
            N           + +       +WT++ETL LLEAL  Y DDW KV++HVG RT+ EC+
Sbjct: 593 KNVP--------SKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECI 652

Query: 305 AHFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASN 364
            HF++LP+ + +                         LE++  SL        P + + N
Sbjct: 653 LHFLRLPIEDPY-------------------------LEDSEASLGPLAYQPIPFSQSGN 712

Query: 365 PIMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGG 424
           P+M+  AFL+S+V   VA AAA +A+ E S          V A  R   E       +  
Sbjct: 713 PVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP 762

Query: 425 SSG--TSTLRGSSVDANSQIKE---EEVEVE 442
           + G  +S + G++ D   +I+E   +E  VE
Sbjct: 773 AFGLESSGIAGTTSDEPERIEESGNDEARVE 762

[Close]

BLAST of Moc11g00250 vs. ExPASy TrEMBL
Match: A0A6J1F6D7 (SWI/SNF complex subunit SWI3B OS=Cucurbita moschata OX=3662 GN=LOC111442757 PE=4 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 4.9e-216
Identity = 404/516 (78.29%), Postives = 445/516 (86.24%), Query Frame = 0


Query: 1   MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPP 60
           MA N PVQ+P TD SAK       P+PS    PSP   TPPVKI+T  SDS +TP+ VP 
Sbjct: 1   MAANLPVQDPPTDASAKH------PTPS----PSPTLVTPPVKIDTPSSDSGKTPAAVPA 60

Query: 61  ATPRHQDLP----PDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120
            TPR +DLP    PD +HLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN
Sbjct: 61  PTPRPEDLPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120

Query: 121 SIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRD 180
           +IVKNFRE PSKKITFT+VRKTLVADVGSIRRVFDFLEAWGL+NYSPSALNKPLKWEDRD
Sbjct: 121 AIVKNFRECPSKKITFTEVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRD 180

Query: 181 SKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240
           SKSN+S S +GE GGSSADS+A K+AS+RVCSGCKSICSIACFACDKFDLTLCARCYVRG
Sbjct: 181 SKSNSSASHTGEPGGSSADSAAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240

Query: 241 NYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVA 300
           NYRVGVSSSDFRRVEIN++TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVA
Sbjct: 241 NYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVA 300

Query: 301 HFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNP 360
           HFVKLPLGEQF+GYPDSGN+  + T VKDH SADL LE+  T L SKRI LSPLADASNP
Sbjct: 301 HFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNP 360

Query: 361 IMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGS 420
           IMAQAAFLSSLVGVEVAEAAAHAAV++LSD GFGGDGE   AVAR+ G+QGN+V S GGS
Sbjct: 361 IMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGS 420

Query: 421 SGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQL 480
           +  S+   SSVDANSQI++EEV VE+AISHILDV++KE VDK+   EE+DLQMEKE  QL
Sbjct: 421 TARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQIKEAVDKLDRLEEVDLQMEKEFKQL 480

Query: 481 DQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRT 513
           DQMKSMLFVDQLNLLF +GCIP  T++DK+ KN+ T
Sbjct: 481 DQMKSMLFVDQLNLLFRKGCIP--TIEDKNSKNLST 501

[Close]

BLAST of Moc11g00250 vs. ExPASy TrEMBL
Match: A0A6J1IDY0 (SWI/SNF complex subunit SWI3B OS=Cucurbita maxima OX=3661 GN=LOC111474552 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 6.4e-216
Identity = 405/516 (78.49%), Postives = 446/516 (86.43%), Query Frame = 0


Query: 1   MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPP 60
           MA N PVQ+P TD SAKQ      P+PS    PSP   TPPVKI+T  SDS +TP+ VP 
Sbjct: 1   MAANLPVQDPPTDASAKQ------PTPS----PSPTLVTPPVKIDTPSSDSGKTPAAVPA 60

Query: 61  ATPRHQDLP----PDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120
           +TPR +DLP    PD +HLPSYSRWFSWNGIHECEVRFLPEFF+SRSPSKNPRVYKYLRN
Sbjct: 61  STPRPEDLPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRN 120

Query: 121 SIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRD 180
           +IVKNFRE PSKKITFTDVRKTLVADVGSIRRVFDFLEAWGL+NYSPS LNKPLKWEDRD
Sbjct: 121 AIVKNFRECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRD 180

Query: 181 SKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240
           SKSN+S S +GE GGSSADSSA K+AS+RVCSGCKSICSIACFACDKFDLTLCARCYVRG
Sbjct: 181 SKSNSSASHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240

Query: 241 NYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVA 300
           NYRVGVSSSDFRRVEIN++TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVA
Sbjct: 241 NYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVA 300

Query: 301 HFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNP 360
           HFVKLPLGEQF+GYPDSGN+  + T VKDH SADL LE+  T L SKRI LSPLADASNP
Sbjct: 301 HFVKLPLGEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNP 360

Query: 361 IMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGS 420
           IMAQAAFLSSLVGVEVAEAAAHAAV++LSD GFGGDGE   AVAR+ G+QGN+V S GGS
Sbjct: 361 IMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGS 420

Query: 421 SGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQL 480
           +  S+   SSVDANSQI++EEV VE+AISHILDV+MKE VDK+   EE+DLQMEKE  QL
Sbjct: 421 TARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQL 480

Query: 481 DQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRT 513
           DQMKSMLFVDQLNLLF++G IP  T++DK+ KN+ T
Sbjct: 481 DQMKSMLFVDQLNLLFHKGYIP--TIEDKNSKNLST 501

[Close]

BLAST of Moc11g00250 vs. ExPASy TrEMBL
Match: A0A6J1C9A8 (SWI/SNF complex subunit SWI3B OS=Momordica charantia OX=3673 GN=LOC111009150 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 7.1e-215
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 123 RETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNAS 182
           RETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNAS
Sbjct: 51  RETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNAS 110

Query: 183 VSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 242
           VSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV
Sbjct: 111 VSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 170

Query: 243 SSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP 302
           SSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP
Sbjct: 171 SSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP 230

Query: 303 LGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAA 362
           LGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAA
Sbjct: 231 LGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAA 290

Query: 363 FLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTL 422
           FLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTL
Sbjct: 291 FLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTL 350

Query: 423 RGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSM 482
           RGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSM
Sbjct: 351 RGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSM 410

Query: 483 LFVDQLNLLFNRGCIPGTTVQDKDGKNVRTC 514
           LFVDQLNLLFNRGCIPGTTVQDKDGKNVRTC
Sbjct: 411 LFVDQLNLLFNRGCIPGTTVQDKDGKNVRTC 441

[Close]

BLAST of Moc11g00250 vs. ExPASy TrEMBL
Match: A0A1S3BW08 (SWI/SNF complex subunit SWI3B OS=Cucumis melo OX=3656 GN=LOC103493854 PE=4 SV=1)

HSP 1 Score: 750.4 bits (1936), Expect = 5.1e-213
Identity = 404/517 (78.14%), Postives = 435/517 (84.14%), Query Frame = 0


Query: 1   MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPP 60
           MA NSPVQ+P TD SAKQSAP          +PSPA  TPP+KIET PSDS QTPS VP 
Sbjct: 1   MAANSPVQDPPTDASAKQSAP----------SPSPALVTPPLKIETPPSDSGQTPSAVPA 60

Query: 61  ATPRHQDLP----PDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120
            TPR  DLP    PD IHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN
Sbjct: 61  PTPRPDDLPQPTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120

Query: 121 SIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRD 180
           SIVKNFRE PSKKITFTD+RKTLVADVGSIRRVFDFLEAWGLINYSPSAL+KPLKWEDRD
Sbjct: 121 SIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRD 180

Query: 181 SKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240
           SKSNAS S +GE GG SA+SSA K+AS+RVCSGCKSICSIACFACDKFDLTLCARCYVRG
Sbjct: 181 SKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240

Query: 241 NYRVG-VSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECV 300
           NYRVG VSSSDFRRVEIN+DTRTDWTDKETLHLLEAL HYGDDWKKVAQHVGGRTERECV
Sbjct: 241 NYRVGVVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECV 300

Query: 301 AHFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASN 360
           AHFVKLPLGEQF GYPDS +IDN YT VKDH SA+L LE+ G S+P+KRI LSPLADASN
Sbjct: 301 AHFVKLPLGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASN 360

Query: 361 PIMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGG 420
           PIMAQAAFLSSLVG+EVAEAAA AAVI+LS+  FG DGE    +AR+T EQGN+VAS  G
Sbjct: 361 PIMAQAAFLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVASCEG 420

Query: 421 SSGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQ 480
               S LRGSS+D           +E+AISHI+DV+MKE VDK+ GFEE +LQMEK   Q
Sbjct: 421 ----SLLRGSSMD-----------MEKAISHIVDVQMKEFVDKLNGFEEGELQMEKVFKQ 480

Query: 481 LDQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRT 513
           LDQMKSMLFVDQLNLLFN+GC+P  TV+DK   NVRT
Sbjct: 481 LDQMKSMLFVDQLNLLFNKGCVP--TVEDKSNMNVRT 490

[Close]

BLAST of Moc11g00250 vs. ExPASy TrEMBL
Match: A0A0A0L3F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664510 PE=4 SV=1)

HSP 1 Score: 733.8 bits (1893), Expect = 4.9e-208
Identity = 401/519 (77.26%), Postives = 434/519 (83.62%), Query Frame = 0


Query: 1   MATNSPVQEPSTDTSAKQSAPAPSPSPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPP 60
           MA NSPVQ+P TD SAKQSAP          +PSPA  TPP+KIET PSDS QTPS VP 
Sbjct: 63  MAANSPVQDPPTDASAKQSAP----------SPSPALVTPPLKIETPPSDSGQTPSAVPA 122

Query: 61  ATPRHQDLP----PDLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 120
            TPR +DLP    PD IHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN
Sbjct: 123 PTPRPEDLPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN 182

Query: 121 SIVKNFRETPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRD 180
           SIVKNFRE PSKKITFTD+RKTLVADVGSIRRVFDFLEAWGLINYSPSAL+KPLKW+DRD
Sbjct: 183 SIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRD 242

Query: 181 SKSNASVSLSGEAGGSSADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRG 240
           SKSNAS S +GE GG SA+SSA K+AS+RVCSGCKSICSIACFACDKFDLTLCARCYVRG
Sbjct: 243 SKSNASASNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRG 302

Query: 241 NYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVA 300
           NYRVGVSSSDFRRVEIN+DTRTDWTDKETLHLLEAL HYGDDWKKVAQHVGGRTERECVA
Sbjct: 303 NYRVGVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVA 362

Query: 301 HFVKLPLGEQFIGYPDSGNIDNKYTAVKDHVSADLVLENA---GTSLPSKRICLSPLADA 360
            FVKLPLGEQF GYPDS +IDN  T VKD  SA+L LE+    GTS+P+KRI LSPLADA
Sbjct: 363 QFVKLPLGEQFHGYPDSEHIDNNCT-VKDEASANLTLESTGKIGTSIPNKRIRLSPLADA 422

Query: 361 SNPIMAQAAFLSSLVGVEVAEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASS 420
           SNPIMAQAAFLSSLVGVEVAEAAA AAVI+LS+  FGGDGE    VAR+ GEQGN+ AS 
Sbjct: 423 SNPIMAQAAFLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQGNDAASH 482

Query: 421 GGSSGTSTLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKEL 480
           GGS      RGS++D           +E+AISHI++V+MKEIVDK+ GFEE +LQMEK  
Sbjct: 483 GGS---CLSRGSTMD-----------MEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVF 542

Query: 481 GQLDQMKSMLFVDQLNLLFNRGCIPGTTVQDKDGKNVRT 513
            QLDQMKSMLFVDQLNLLFN+ CI  TTV++K   NVRT
Sbjct: 543 KQLDQMKSMLFVDQLNLLFNKECI-STTVEEKSNMNVRT 555

[Close]

BLAST of Moc11g00250 vs. TAIR 10
Match: AT2G33610.1 (switch subunit 3 )

HSP 1 Score: 448.0 bits (1151), Expect = 1.0e-125
Identity = 253/470 (53.83%), Postives = 336/470 (71.49%), Query Frame = 0


Query: 26  SPSPWAAPSPAPATPPVKIETSPSDSAQTPSTVPPATPRHQDLPPDLIHLPSYSRWFSWN 85
           +P P  +    P+TP +   TS   +A + S   P++    D+  D IH+PSYS WFSW 
Sbjct: 5   APDPGGSGEILPSTPSLSETTSGGAAAASKSAQLPSS--SSDI--DNIHVPSYSSWFSWT 64

Query: 86  GIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRETPSKKITFTDVRKTLVADVGS 145
            I++CEVR LPEFFDSRS SKNP+ Y YLRNSI+K +R+   +KI+FTDVR+TLV+DV S
Sbjct: 65  DINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVS 124

Query: 146 IRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNASVSLSGEAGGSSADSSAS--KEAS 205
           IRRVFDFL++WGLINY+ SA  KPLKWE+++         +G++ G +A   A+  KE +
Sbjct: 125 IRRVFDFLDSWGLINYNSSASAKPLKWEEKE---------AGKSAGDAASEPATTVKETA 184

Query: 206 RRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINEDTRTDWTDK 265
           +R C+GCK+ICSIACFACDK+DLTLCARCYVR NYRVG++SS+F+RVEI+E+++ +W+DK
Sbjct: 185 KRNCNGCKAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEESKPEWSDK 244

Query: 266 ETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFIGYPDSGNIDNKYTAV 325
           E L LLEA+MHYGDDWKKVA HV GRTE++CV+ FVKLP GEQF+   DS +    +  +
Sbjct: 245 EILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDSEDGLEMFDQI 304

Query: 326 KDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVIE 385
           KD    +    +   S P+KRI L+PLADASNPIMAQAAFLS+L G  VAEAAA AAV  
Sbjct: 305 KDSDIPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAGTNVAEAAARAAVRA 364

Query: 386 LSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTLRGSSVDANSQIKEEEVEVERA 445
           LSD  +  D  +    +RD   Q    ASSG ++   + R +  DA S I++EE EVE A
Sbjct: 365 LSDVDYEADKNA----SRDPNRQDANAASSGETTRNESER-AWADAKSLIEKEEHEVEGA 424

Query: 446 ISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSMLFVDQLNLLFN 494
           I   ++VEMK+I D+IV FE+LDL+ME+   QL++++++LFVDQLN+ F+
Sbjct: 425 IKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFH 456

[Close]

BLAST of Moc11g00250 vs. TAIR 10
Match: AT2G47620.1 (SWITCH/sucrose nonfermenting 3A )

HSP 1 Score: 162.9 bits (411), Expect = 6.7e-40
Identity = 136/491 (27.70%), Postives = 226/491 (46.03%), Query Frame = 0


Query: 71  DLIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRETPSKKI 130
           +L  +P+ S WF W+ IHE E R   EFF   S ++ P+VYK  R+ I+  FRE   +++
Sbjct: 11  ELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRL 70

Query: 131 TFTDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDR-DSKSNASVSLSGEA 190
           TFT VRK LV DV  +++VF FLE WGLIN+S S     LK  D   S  NA +     A
Sbjct: 71  TFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSS-----LKKNDHLLSVDNAKIEQGTPA 130

Query: 191 G----------------------------------GSSADSSASKEASRRVCSGCKSICS 250
           G                                   S   S   K     VC+ C   C 
Sbjct: 131 GIRVTATPNSLRPITAPPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCD 190

Query: 251 IACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINEDTRTDWTDKETLHLLEALMHY 310
              +  +K  + +C +C+  GNY    ++ DF+   I       WT++E L LLE+++ +
Sbjct: 191 SPFYQHNKGIVNICEKCFKNGNYGENNTADDFKL--IGNSAAAVWTEEEILLLLESVLKH 250

Query: 311 GDDWKKVAQHVGGRTERECVAHFVKLPLGEQFIG----------YPDSGNIDNKYTAVKD 370
           GDDW+ ++Q V  ++  +C++  ++LP GE  +G            +  N +   T  ++
Sbjct: 251 GDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSILTEDENTEQVQTDGQE 310

Query: 371 HVSADLVLENAG----TSLPSKRICLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAV 430
           H   +   E          P+KR  ++ +++  + +M Q A ++S VG  VA AAA AA+
Sbjct: 311 HEETETREEKEDRVNEDEPPAKRKRVALISEGDSSLMKQVAAMASKVGPSVATAAAKAAL 370

Query: 431 IELSDTG------FGGDGESVPAVARDTGE---------------QGNEVASSGGSSGTS 490
             L D        F  D  S   V R  GE               QG  VA    +S  +
Sbjct: 371 AALCDEASCPKEIFDTDDYSNFTVDRANGEKDTDMEEQQEEKDGPQGLPVALRIRASVAT 430

Query: 491 TLRGSSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMK 492
            L  ++  A     +EE E+E+  + +++ ++K++  K+   ++L+  M++E   ++ +K
Sbjct: 431 ALGAAAAQAKILADQEEREMEQLAATVIEQQLKKLQSKLKFLDDLESIMDEEEKVIEGVK 490

[Close]

BLAST of Moc11g00250 vs. TAIR 10
Match: AT1G21700.1 (SWITCH/sucrose nonfermenting 3C )

HSP 1 Score: 153.3 bits (386), Expect = 5.3e-37
Identity = 132/495 (26.67%), Postives = 218/495 (44.04%), Query Frame = 0


Query: 71  DLIH-LPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRETPSKK 130
           DL+H LP +S WF+ N +   E + +P+FF  +SP+  P  Y   RN+IV  + E P K 
Sbjct: 173 DLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKT 232

Query: 131 ITFTDVRKTL-VADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNASVSLSGE 190
           +T +D +  +   D+    RVF FL+ WG+INY  +A + P    D    S+     +GE
Sbjct: 233 LTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRD---VSDVREDTNGE 292

Query: 191 AGGSSA-----------DSSASKEASRRVCSGCKS---------------ICSIACFACD 250
               SA           D    +     V S   S               +C   C  C 
Sbjct: 293 VNVPSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDGDSPDLDIRIREHLCDSHCNHCS 352

Query: 251 ------------KFDLTLCARCYVRGNYRVGVSSSDFRRVE----INEDTRTDWTDKETL 310
                       K D+ LC  C+  G + VG S  DF RV+      +    +WTD+ETL
Sbjct: 353 RPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETL 412

Query: 311 HLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFIGYPDSGNIDNKYTAVK-- 370
            LLEA+  Y ++W ++A HVG +++ +C+ HF++LP+ +  +   +   + N        
Sbjct: 413 LLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGY 472

Query: 371 DHVSADLVLENAGTSLPSKRICLS-PLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVIE 430
           DH   D   +  G S       +  P   + NP+MA  AFL+S VG  VA + AH ++  
Sbjct: 473 DHKGTDSNGDLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSV 532

Query: 431 LSD------TGFGGDGESVPAVARDTGEQGNEVASSGGSSGTST-------------LRG 490
           LS+       G  G   S+        +  ++ +S  G+   +              L  
Sbjct: 533 LSEDDRMKSEGMQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPLPQDKVMAAFRAGLSA 592

Query: 491 SSVDANSQIKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSMLF 500
           ++  A      EE E++R  ++I++ ++K +  K+  F E++  + KE  Q+++ +    
Sbjct: 593 AATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFS 652

[Close]

BLAST of Moc11g00250 vs. TAIR 10
Match: AT4G34430.1 (DNA-binding family protein )

HSP 1 Score: 129.4 bits (324), Expect = 8.2e-30
Identity = 94/309 (30.42%), Postives = 148/309 (47.90%), Query Frame = 0


Query: 75  LPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRETPSKKITFTD 134
           +P++  WFSW  IH  E R LP FF+ +   +   VY+ +RN I+  F   P+ +I   D
Sbjct: 147 VPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKD 206

Query: 135 VRKTLVADVGSIRRVFDFLEAWGLINYSP--------------------SALNKPLKWED 194
           + +  V D  + + V +FL+ WGLIN+ P                    S LN   +++ 
Sbjct: 207 LTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQV 266

Query: 195 RDS--------KSNASVSLSGEAGGSSADSSASKEASRRV---CSGCKSICSIACFACDK 254
            ++        +  A  + SG      A     K+    V   C+ C + CS   + C K
Sbjct: 267 DEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPK 326

Query: 255 -FDLTLCARCYVRGNYRVGVSSSDFRRVEINEDTRT---DWTDKETLHLLEALMHYGDDW 314
             D  LC  C+  G +   +SSSDF  +E  E        WTD+ETL LLEAL  + ++W
Sbjct: 327 QADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENW 386

Query: 315 KKVAQHVGGRTERECVAHFVKLPLGEQF---IGYPDSGNIDNKYTAV-KDHVSADLVLEN 345
            ++A+HV  +T+ +C+ HF+++P+ + F   I Y D  + D    AV KD  S   VL++
Sbjct: 387 NEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNS---VLKD 446

[Close]

BLAST of Moc11g00250 vs. TAIR 10
Match: AT4G34430.4 (DNA-binding family protein )

HSP 1 Score: 129.4 bits (324), Expect = 8.2e-30
Identity = 94/309 (30.42%), Postives = 148/309 (47.90%), Query Frame = 0


Query: 75  LPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRETPSKKITFTD 134
           +P++  WFSW  IH  E R LP FF+ +   +   VY+ +RN I+  F   P+ +I   D
Sbjct: 147 VPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKD 206

Query: 135 VRKTLVADVGSIRRVFDFLEAWGLINYSP--------------------SALNKPLKWED 194
           + +  V D  + + V +FL+ WGLIN+ P                    S LN   +++ 
Sbjct: 207 LTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQV 266

Query: 195 RDS--------KSNASVSLSGEAGGSSADSSASKEASRRV---CSGCKSICSIACFACDK 254
            ++        +  A  + SG      A     K+    V   C+ C + CS   + C K
Sbjct: 267 DEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPK 326

Query: 255 -FDLTLCARCYVRGNYRVGVSSSDFRRVEINEDTRT---DWTDKETLHLLEALMHYGDDW 314
             D  LC  C+  G +   +SSSDF  +E  E        WTD+ETL LLEAL  + ++W
Sbjct: 327 QADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENW 386

Query: 315 KKVAQHVGGRTERECVAHFVKLPLGEQF---IGYPDSGNIDNKYTAV-KDHVSADLVLEN 345
            ++A+HV  +T+ +C+ HF+++P+ + F   I Y D  + D    AV KD  S   VL++
Sbjct: 387 NEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNS---VLKD 446

The following BLAST results are available for this feature:

BLAST of Moc11g00250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515051.1	1.1e-217	79.07	SWI/SNF complex subunit SWI3B [Cucurbita pepo subsp. pepo]	[more]
KAG6591190.1	3.2e-217	78.88	SWI/SNF complex subunit SWI3B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936036.1	1.0e-215	78.29	SWI/SNF complex subunit SWI3B [Cucurbita moschata]	[more]
XP_022975356.1	1.3e-215	78.49	SWI/SNF complex subunit SWI3B [Cucurbita maxima]	[more]
XP_022137807.1	1.5e-214	100.00	SWI/SNF complex subunit SWI3B [Momordica charantia]	[more]

BLAST of Moc11g00250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JG2	1.5e-124	53.83	SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana OX=3702 GN=SWI3B PE=1 SV=1	[more]
Q0JCC3	2.1e-38	27.42	SWI/SNF complex subunit SWI3A homolog OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
O14470	1.9e-31	25.92	SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
Q6PDG5	2.5e-31	29.08	SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2	[more]
Q8TAQ2	4.2e-31	29.92	SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=SMARCC2 PE=1 SV=1	[more]

BLAST of Moc11g00250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6D7	4.9e-216	78.29	SWI/SNF complex subunit SWI3B OS=Cucurbita moschata OX=3662 GN=LOC111442757 PE=4...	[more]
A0A6J1IDY0	6.4e-216	78.49	SWI/SNF complex subunit SWI3B OS=Cucurbita maxima OX=3661 GN=LOC111474552 PE=4 S...	[more]
A0A6J1C9A8	7.1e-215	100.00	SWI/SNF complex subunit SWI3B OS=Momordica charantia OX=3673 GN=LOC111009150 PE=...	[more]
A0A1S3BW08	5.1e-213	78.14	SWI/SNF complex subunit SWI3B OS=Cucumis melo OX=3656 GN=LOC103493854 PE=4 SV=1	[more]
A0A0A0L3F9	4.9e-208	77.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664510 PE=4 SV=1	[more]

BLAST of Moc11g00250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33610.1	1.0e-125	53.83	switch subunit 3	[more]
AT2G47620.1	6.7e-40	27.70	SWITCH/sucrose nonfermenting 3A	[more]
AT1G21700.1	5.3e-37	26.67	SWITCH/sucrose nonfermenting 3C	[more]
AT4G34430.1	8.2e-30	30.42	DNA-binding family protein	[more]
AT4G34430.4	8.2e-30	30.42	DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 256..304 e-value: 3.4E-10 score: 49.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 257..302 score: 7.863002
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 260..301 e-value: 3.68997E-9 score: 50.2666
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 258..301 e-value: 3.9E-12 score: 46.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 257..294 score: 9.302569
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 79..165 e-value: 3.2E-29 score: 102.7
IPR032451	SMARCC, C-terminal	PFAM	PF16495	SWIRM-assoc_1	coord: 422..490 e-value: 2.6E-6 score: 27.3
IPR007526	SWIRM domain	PFAM	PF04433	SWIRM	coord: 76..161 e-value: 1.6E-25 score: 89.2
IPR007526	SWIRM domain	PROSITE	PS50934	SWIRM	coord: 73..170 score: 25.372437
None	No IPR available	GENE3D	1.10.10.60		coord: 256..305 e-value: 8.5E-15 score: 56.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..434
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..429
None	No IPR available	PANTHER	PTHR12802:SF44	SWI/SNF COMPLEX SUBUNIT SWI3B	coord: 13..506
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 13..506
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 255..306 score: 20.275166
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 72..174
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 257..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g00250.1	Moc11g00250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding