Moc11g00170 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g00170
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr11: 174959 .. 179515 (-)
RNA-Seq Expression	Moc11g00170
Synteny	Moc11g00170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATACTTCAGCCACACACTTCACCTTCTGCGATTCCATCTTCCTCCGCTTCATTCTACGGGAGTTCTCTTCAGCAACCCCGTTTATCAAATCTTCGAAACAGCCGCTCCGTTCCCTATCGCTCCACTTGCAAAGCTTCCTGGCAGGAGGTTCGTAAGCATAACAAACTCCGCGTTTCTAACTCGAGCTCATTGCTAAAGTCCTTTTTTATTTTCTCCATCTTGCTGTAGCTTGCGGGGGTTCTGATATTCTCCGCTATTCCCTTCACGGCTGTGAAAGCCATCGCCAATAGTCCACTCGGAGAGTCGCTCCAGAGACAAATGGAAAAGAAGAAAGAAGCTGCCATAGCCAACTCTTCCAAGTTCAAGGCTCTCGCTAGGGAGGCTAGAAAAGATAGGTAATCGGGTAAGCTAATTTGTTGGTGCCAAATAAATATATATCATCGCATTGTTCGCTCAATTATCTTCAAAACCTGCTATATTTTCTGTTAGACTGGTAATTCTTACTGTTGAAAATTGGTTCAACGACGCGCATCTGATTTGGTGACGATGATACTAGGTGCCCTAATCTCAGAAAAAGTTGGTAATGTTTCTCTCTATTCGGATGAAGAAAGCTATGGAAACTGACTTTCTATTATTATCACGAAAGCGTGAGTTTGGAAATAAAGAACTGCCTGGTCTGGATATTATACGTGCAGAAATGTTGTGCTTGTACTAATTTACATTGTATTGGACGTGGATGTGGTATTATAGATTATTTTTCTTAACCATGATGTTCAACTGCCAACAAATAGAGCATATGAATTTAATTGCATCATATTGTAAATACCATTCTATTGGTGAATTATTGCAGTTCCTGGTATGGAGAAGAGCGTCCTCGCTGGCTTGGTCCAATACCATATGAGTATCCAAAATATCTAACAGGTGATCTGCCAGGTGACTATGGGTTCGACATTGCAGGCCTGAGCAAGGATCCCGTGGCTTTTCAGAAGTACTTCAAGTATATTGACCTTCTTTCAGCTTAAACTTTGATTCAGCATATCCCCCACCCGACCCCAATAGGCAACAACTGAAGTGGAAGCCAAATGTAGATTTATTAGTCCACACCATAAGAATATGATTATTTGAAGTAGTTTTGACTTGTGAATTGCTGATGATGATTGAAACAAGCTTGGCTAGGAATGGAATGACCCTGCAGAACCTAGTGTAGTCATCACCTTACAATGATTCCTGGAGACCTATTCACATATTGTTAGCTATGAGTATATAACCTGCACGCTCCACAGCTTGTTATCCAACTTTGAGATATATGAGCTATCCTTGAGTAATTAAATTTGCAGCTCTAACTTATCCTGGACAAGGAACTGTTATAGGATATCTATTCTTCTCTTTTAGCACAGGCAATTCATGTATTTACTCTGTCATATTTAGCTTTGAAATACTGCATGCTCGTTGGGCTATGTTGGCATCCCTTGGGGCTTTAATACCAGAGATCCTAGATATTTCTGGAGCATTTCATTTCAGCGAACCCATCTGGTGGCGTGTAGGCTATTCAAAGCTTAAGGTTTGTTTTCAATCTCCTGATAAACCATCTTTATGGATATCTTATAGCGTGGAATCTTTCTCATGTGTGCGTATGCGTATGCGTGTGCGTGTATATATATATATATATATATATATATATATATATATTTTCTTTTTCTCGCCTTTGTCCTCTAGTTATACTTTTACAGTTAGCTCTTAAATTGTTGTTTATCTTACTTCTTCCGTTCAATCATGATTTATTTTAAAGTTTGTGCACTCTCTTCCTTCAATCTTTTTAGTTTTTAACGTCTGCCTTAATTAATGATATCAAAGACGAAGACCATAACGTTGCCCCTAGTCTCATTCTAGTGCCAGGAATTATGACTTCATGTCTTTTGCAGTGCTGTGATAACTTTACTTTGGTTGCAGCCTTATTTCCATTTCAGTATTTCACTGTTGTTCTGTTCCAATATATTAGGCTATATGCATTCTTGTTGTGCCGTAAAAAATAGTTGCTGGGTTGATGTTTTTTTTTTTTTTTTTTGGGATGAGAAACAACACTTTCATCGAGAGAAATGGAAAACATACAAAAACAAAGAGGGCATATAAAAAAACAGCCCAACAAAGGGGAACCCCTAAAGAAAAGGACTCCGAATGAGACCTAACTGATAATTACAAAAGGTCTTAGTGACTGAGCCCCATAAAGAGGTATTAAACCTAATGAGATCCTAAACATAAACATAAAAGGGCTTGCTGGGGTTGATGTCAAAACACAGAGGATTATTTAATGATACTTAACACATAACTTGTCTGGAAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTGTCTGGAAACTTGAGAGGTTTGAACTATCTCGCTCTCTCTAGAGCTGTCCAGCCTTCGGCAACCTTACTGTCTGTGTCTAGCCTTCTCCTTTACAATTCCTCACTCTATCGAACAACTTCCCAAGTGGCCAAGCAACTACTTCAATAGTAGTTACTAATTGTTTGCAAAATGAAAACCAAACGGATAACATGCTGGAAAATACTTAAAACATATTAACACGGGAAAGTAAATAGTGTTACAGAGTATACTTGTAACTATGAAAATTATAAAGCAAGCAAAAAATAAATTTAAATTTAACTTGGAGTAGCAACCAAGATCAAAACTAGTTGAATTTGAGAGAAATGGTTGGGGCTTGAGTACCTTACAATTTCTCTAAAGTAGATACGCTACTTTTACTAGTGCTTAAGATTGATTTGATGTATGCTTTCTAGAATATAGCAACAACCAATTCTGAGACAACATTGATTTTTCTTATTTGCTGGGGTGAATTGCAACAGAACTCTAACACGGAACTTAGCTCTAGGGATAAATTGAAAGAGGAAGGAAATGGGAGAAGAAAGGTATCTCCAGATGGTGTGTTGGAAAGAAGTGGAATACACTCCTTTGTATGGCTTCAAGAAAGGAAAGCTGACTTAAATTGTGGTATCGGTTGGAGTTAAGAAATCTTTTAAATTCATAATTAATTTTGATGAGATTAATTCATTCTTGAATTATTTTCAAGAAGTGCACGGACAAAAAGTGTTCATATTACAATGTCATATTCCCTTCATCTATTAACGACATGAGTGTGTTTAATTTCTCATTCATTCGATCCTAACTTTCCAGCATTATCAACTGGCTTTTTTCACTTTAATTTTTGGGTATTTACTTTTCACCAGGGTGATACACTCGACTATCTTGGAATACCAGGGCTGCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATATGCCAAGTCATTTTAATGGTAACCTATATCGAACAATCTTATTTTCTATCTCATGTCATTTTCTTTTTCTCATGCCTATTGGCACTCTAATTAAATGGTTGGTGGGGGGGGGGGGGGGGATTCCCCCTTGTCCTTGACAAACTTGTTTAGGAGTTAGGAACGCAACTTTGCCTTTCGGAGATTTTTACAAGTTAGAAACAAATAGATTATTTATTTTTGTGTGTATTATTAAACTATCACATGTCTGATTGTTCTTACAACTGTCTGATGCAAATCAAAATGTAAATAGGTTGGTCCTGAGTACGCAAGATATTGTGGTATAGAGGCATTGGAGCCCCTGGGAATATACCTGCCCGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAACCTGTCCAAGGATGCTGCAGCATTTGAGGAACTGAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACATATTTCTGATCCTTTCCACAATAACTTCCTTTCCCTGCTCAACTCTTGGTAAAGTAGTTAATCATCGGAATGTTTATATAATATAGATATAGTTTCTTCAAATCTGTAAAGTGTTCATAGGGATGGACAATGTATCATATGGGTGTTCTAGATGGGTGGTTATTGCTGAACGAGTTGATACTTGATATAGATGGGTGGTTATATCTCAATGAGTTGATACTTGATGATGTGGTTATTATATCTACCTTATATATCAAGTATCTTTGAAAAGTTCATAGTGTGGTGATGCAGAAAGTTTAGATGAGGTAGAAAATGTAGGATAAGGATTCAAGTAAAGGGGCGTTAATTAATTTTGATATGGAGGTAGAAGTGAAAGTAGTTAGAGGCGTTTGTGTGAAATGGGTGATGAAGAGGGAATAATTAGGAGTGTTAATGAAGGTTATAAAGCTGTGGGGAAGGGAAGGGAAAGGATGTTGTGCTGACACGGACTTCCACTGGCACCCAAGTCAAGTTATGTGATTGGGAATGGGATGGGTCCATTCCAGTCCAACCGGGACCTCCATTGGCATGCGAACCAACCCACGCTTCAACGTGGTCCTCTGCCTTCTTCTATCACCCTTTTTCGTTGCACTTGCACAATTGGATCGGCTTGGCTTGATGATGAGGCATGGTTATGA

mRNA sequence

ATGGCGATACTTCAGCCACACACTTCACCTTCTGCGATTCCATCTTCCTCCGCTTCATTCTACGGGAGTTCTCTTCAGCAACCCCGTTTATCAAATCTTCGAAACAGCCGCTCCGTTCCCTATCGCTCCACTTGCAAAGCTTCCTGGCAGGAGCTTGCGGGGGTTCTGATATTCTCCGCTATTCCCTTCACGGCTGTGAAAGCCATCGCCAATAGTCCACTCGGAGAGTCGCTCCAGAGACAAATGGAAAAGAAGAAAGAAGCTGCCATAGCCAACTCTTCCAAGTTCAAGGCTCTCGCTAGGGAGGCTAGAAAAGATAGTTCCTGGTATGGAGAAGAGCGTCCTCGCTGGCTTGGTCCAATACCATATGAGTATCCAAAATATCTAACAGGTGATCTGCCAGGTGACTATGGGTTCGACATTGCAGGCCTGAGCAAGGATCCCGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTGGCATCCCTTGGGGCTTTAATACCAGAGATCCTAGATATTTCTGGAGCATTTCATTTCAGCGAACCCATCTGGTGGCGTGTAGGCTATTCAAAGCTTAAGGGTGATACACTCGACTATCTTGGAATACCAGGGCTGCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATATGCCAAGTCATTTTAATGGTTGGTCCTGAGTACGCAAGATATTGTGGTATAGAGGCATTGGAGCCCCTGGGAATATACCTGCCCGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAACCTGTCCAAGGATGCTGCAGCATTTGAGGAACTGAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCAGCATTGACGGATGGGTGGTTATTGCTGAACGAGTTGATACTTGATATAGATGGGTGGTTATATCTCAATGAGTTGATACTTGATGATGTGTCAAGTTATGTGATTGGGAATGGGATGGGTCCATTCCAGTCCAACCGGGACCTCCATTGGCATGCGAACCAACCCACGCTTCAACGTGGTCCTCTGCCTTCTTCTATCACCCTTTTTCGTTGCACTTGCACAATTGGATCGGCTTGGCTTGATGATGAGGCATGGTTATGA

Coding sequence (CDS)

ATGGCGATACTTCAGCCACACACTTCACCTTCTGCGATTCCATCTTCCTCCGCTTCATTCTACGGGAGTTCTCTTCAGCAACCCCGTTTATCAAATCTTCGAAACAGCCGCTCCGTTCCCTATCGCTCCACTTGCAAAGCTTCCTGGCAGGAGCTTGCGGGGGTTCTGATATTCTCCGCTATTCCCTTCACGGCTGTGAAAGCCATCGCCAATAGTCCACTCGGAGAGTCGCTCCAGAGACAAATGGAAAAGAAGAAAGAAGCTGCCATAGCCAACTCTTCCAAGTTCAAGGCTCTCGCTAGGGAGGCTAGAAAAGATAGTTCCTGGTATGGAGAAGAGCGTCCTCGCTGGCTTGGTCCAATACCATATGAGTATCCAAAATATCTAACAGGTGATCTGCCAGGTGACTATGGGTTCGACATTGCAGGCCTGAGCAAGGATCCCGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTGGCATCCCTTGGGGCTTTAATACCAGAGATCCTAGATATTTCTGGAGCATTTCATTTCAGCGAACCCATCTGGTGGCGTGTAGGCTATTCAAAGCTTAAGGGTGATACACTCGACTATCTTGGAATACCAGGGCTGCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATATGCCAAGTCATTTTAATGGTTGGTCCTGAGTACGCAAGATATTGTGGTATAGAGGCATTGGAGCCCCTGGGAATATACCTGCCCGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAACCTGTCCAAGGATGCTGCAGCATTTGAGGAACTGAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCAGCATTGACGGATGGGTGGTTATTGCTGAACGAGTTGATACTTGATATAGATGGGTGGTTATATCTCAATGAGTTGATACTTGATGATGTGTCAAGTTATGTGATTGGGAATGGGATGGGTCCATTCCAGTCCAACCGGGACCTCCATTGGCATGCGAACCAACCCACGCTTCAACGTGGTCCTCTGCCTTCTTCTATCACCCTTTTTCGTTGCACTTGCACAATTGGATCGGCTTGGCTTGATGATGAGGCATGGTTATGA

Protein sequence

MAILQPHTSPSAIPSSSASFYGSSLQQPRLSNLRNSRSVPYRSTCKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTDGWLLLNELILDIDGWLYLNELILDDVSSYVIGNGMGPFQSNRDLHWHANQPTLQRGPLPSSITLFRCTCTIGSAWLDDEAWL

Homology

[Close]

BLAST of Moc11g00170 vs. NCBI nr
Match: XP_022141964.1 (chlorophyll a-b binding protein 7, chloroplastic [Momordica charantia])

HSP 1 Score: 614.8 bits (1584), Expect = 5.2e-172
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPRLSNLRNSRSVPYRSTCKASWQELAGVLIFSA 60
           MAILQPHTSPSAIPSSSASFYGSSLQQPRLSNLRNSRSVPYRSTCKASWQELAGVLIFSA
Sbjct: 6   MAILQPHTSPSAIPSSSASFYGSSLQQPRLSNLRNSRSVPYRSTCKASWQELAGVLIFSA 65

Query: 61  IPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGP 120
           IPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGP
Sbjct: 66  IPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGP 125

Query: 121 IPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDI 180
           IPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDI
Sbjct: 126 IPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDI 185

Query: 181 SGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYC 240
           SGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYC
Sbjct: 186 SGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYC 245

Query: 241 GIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQ 300
           GIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQ
Sbjct: 246 GIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQ 305

Query: 301 AALT 305
           AALT
Sbjct: 306 AALT 309

[Close]

BLAST of Moc11g00170 vs. NCBI nr
Match: XP_023521109.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 562.4 bits (1448), Expect = 3.1e-156
Identity = 277/308 (89.94%), Postives = 289/308 (93.83%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPR----LSNLRNSRSVPYRSTCKASWQELAGVL 60
           MA+ QPHTSPSAI SSSASFYGSSLQQ R      NLRNS S+P+R TC ASWQELAGVL
Sbjct: 3   MALFQPHTSPSAISSSSASFYGSSLQQLRSRTIALNLRNSPSIPHRFTCTASWQELAGVL 62

Query: 61  IFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPR 120
           IFSAIPFTAVKAIANSP GESLQRQ+EKKK AA+A SSKFKALA EARKDSSWYGE+RPR
Sbjct: 63  IFSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEEARKDSSWYGEKRPR 122

Query: 121 WLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPE 180
           WLGP+PY YPKYLTG+LPGDYGFDIAGLS+DPVAF+KYFNFEILHARWAMLASLGAL+PE
Sbjct: 123 WLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPE 182

Query: 181 ILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEY 240
           ILDI GAFHF+EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEY
Sbjct: 183 ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEY 242

Query: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300
           ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Sbjct: 243 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 302

Query: 301 FYSQAALT 305
           FYSQAALT
Sbjct: 303 FYSQAALT 310

[Close]

BLAST of Moc11g00170 vs. NCBI nr
Match: KAG6591186.1 (Chlorophyll a-b binding protein 7, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 561.2 bits (1445), Expect = 6.8e-156
Identity = 276/308 (89.61%), Postives = 289/308 (93.83%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPR----LSNLRNSRSVPYRSTCKASWQELAGVL 60
           MA+ QPHTSPSAI SSSASFYGSSLQQ R      NLRNS S+P+R TC ASWQELAGVL
Sbjct: 1   MALFQPHTSPSAISSSSASFYGSSLQQLRSRTIALNLRNSPSIPHRFTCTASWQELAGVL 60

Query: 61  IFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPR 120
           IFSAIPFTAVKAIANSP GESLQRQ+EKKK AA+A SSKFKALA +ARKDSSWYGE+RPR
Sbjct: 61  IFSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPR 120

Query: 121 WLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPE 180
           WLGP+PY YPKYLTG+LPGDYGFDIAGLS+DPVAF+KYFNFEILHARWAMLASLGAL+PE
Sbjct: 121 WLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPE 180

Query: 181 ILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEY 240
           ILDI GAFHF+EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEY
Sbjct: 181 ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEY 240

Query: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300
           ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Sbjct: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300

Query: 301 FYSQAALT 305
           FYSQAALT
Sbjct: 301 FYSQAALT 308

[Close]

BLAST of Moc11g00170 vs. NCBI nr
Match: XP_022936160.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata])

HSP 1 Score: 561.2 bits (1445), Expect = 6.8e-156
Identity = 276/308 (89.61%), Postives = 289/308 (93.83%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPR----LSNLRNSRSVPYRSTCKASWQELAGVL 60
           MA+ QPHTSPSAI SSSASFYGSSLQQ R      NLRNS S+P+R TC ASWQELAGVL
Sbjct: 3   MALFQPHTSPSAISSSSASFYGSSLQQLRSRTIALNLRNSPSIPHRFTCTASWQELAGVL 62

Query: 61  IFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPR 120
           IFSAIPFTAVKAIANSP GESLQRQ+EKKK AA+A SSKFKALA +ARKDSSWYGE+RPR
Sbjct: 63  IFSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPR 122

Query: 121 WLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPE 180
           WLGP+PY YPKYLTG+LPGDYGFDIAGLS+DPVAF+KYFNFEILHARWAMLASLGAL+PE
Sbjct: 123 WLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPE 182

Query: 181 ILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEY 240
           ILDI GAFHF+EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEY
Sbjct: 183 ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEY 242

Query: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300
           ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Sbjct: 243 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 302

Query: 301 FYSQAALT 305
           FYSQAALT
Sbjct: 303 FYSQAALT 310

[Close]

BLAST of Moc11g00170 vs. NCBI nr
Match: XP_008453032.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo])

HSP 1 Score: 558.1 bits (1437), Expect = 5.8e-155
Identity = 272/308 (88.31%), Postives = 292/308 (94.81%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPR----LSNLRNSRSVPYRSTCKASWQELAGVL 60
           MA++QPHT  S+I SSSASFYG+ LQQ R      NLR++ S+ +RSTC+ASWQELAGVL
Sbjct: 37  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 96

Query: 61  IFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPR 120
           IFSA+PFTAVKAIANSPLGESLQRQ+EKKK++A+ANSSKFKALA EARKDSSWYGEERPR
Sbjct: 97  IFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPR 156

Query: 121 WLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPE 180
           WLGP+PY+YPKYLTG+LPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PE
Sbjct: 157 WLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPE 216

Query: 181 ILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEY 240
           ILDI GAFHF+EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEY
Sbjct: 217 ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEY 276

Query: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300
           ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Sbjct: 277 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 336

Query: 301 FYSQAALT 305
           FYSQAALT
Sbjct: 337 FYSQAALT 344

[Close]

BLAST of Moc11g00170 vs. ExPASy Swiss-Prot
Match: Q9C9K1 (Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB7 PE=2 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.3e-130
Identity = 224/293 (76.45%), Postives = 257/293 (87.71%), Query Frame = 0


Query: 15  SSSASFYGSSLQQPRL--SNLRNSRSV-PYRSTCKASWQELAGVLIFSAIPFTAVKAIAN 74
           SS +S Y S    PR+  S  RN  +V   RS C+ASWQELAGVL+FSAIPFTAVKAIAN
Sbjct: 9   SSLSSSYSSIHSLPRILVSKPRNRIAVTKSRSICRASWQELAGVLVFSAIPFTAVKAIAN 68

Query: 75  SPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGPIPYEYPKYLTG 134
           S +G SL+R++E+KK+ A+ NSS+FK+ A+EAR DS WYG+ERPRW GPIPY+YP YLTG
Sbjct: 69  SSIGVSLRRRLEEKKKEAVENSSRFKSKAQEARNDSKWYGKERPRWFGPIPYDYPPYLTG 128

Query: 135 DLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDISGAFHFSEPIW 194
           +LPGDYGFDIAGL KD + F KYFNFEILHARWAMLA+LGALIPE+ D++G FHF+EP+W
Sbjct: 129 ELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVFDLTGTFHFAEPVW 188

Query: 195 WRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYCGIEALEPLGIY 254
           WRVGYSKL+G+TL+YLGIPGLH+AGSQGVIVIAICQV+LMVGPEYARYCGIEALEPLGIY
Sbjct: 189 WRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYARYCGIEALEPLGIY 248

Query: 255 LPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALT 305
           LPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGFY+QAA T
Sbjct: 249 LPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFT 301

[Close]

BLAST of Moc11g00170 vs. ExPASy Swiss-Prot
Match: P07370 (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB1B PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-45
Identity = 101/208 (48.56%), Postives = 127/208 (61.06%), Query Frame = 0


Query: 97  KALAREARKDSSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFN 156
           KA+A+ A   S WYG +R ++LGP   E P YLTG+ PGDYG+D AGLS DP  F K   
Sbjct: 37  KAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96

Query: 157 FEILHARWAMLASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAG 216
            E++H RWAML +LG + PE+L  +G   F E +W++ G        LDYLG P   L  
Sbjct: 97  LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPS--LVH 156

Query: 217 SQGVIVIAICQVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAF 276
           +Q ++ I  CQV+LM   E  R  G     PLG  +  D  YPGG  FDPL L++D  AF
Sbjct: 157 AQSILAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGG-SFDPLGLAEDPEAF 216

Query: 277 EELKVKEIKNGRLAMVAWLGFYSQAALT 305
            ELKVKEIKNGRLAM +  GF+ QA +T
Sbjct: 217 AELKVKEIKNGRLAMFSMFGFFVQAIVT 234

[Close]

BLAST of Moc11g00170 vs. ExPASy Swiss-Prot
Match: P14278 (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB4 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-44
Identity = 99/198 (50.00%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 107 SSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAM 166
           S WYGE+RP++LGP   + P YLTG+ PGDYG+D AGLS DP  F +    E++H RWAM
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 106

Query: 167 LASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 226
           L +LG + PEIL  +G   F E +W++ G        LDYLG P  +L  +Q ++ I  C
Sbjct: 107 LGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAIWAC 166

Query: 227 QVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKN 286
           QV+LM   E  R  G     PLG  L  D  YPGG  FDPL L+ D  AF ELKVKEIKN
Sbjct: 167 QVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIKN 226

Query: 287 GRLAMVAWLGFYSQAALT 305
           GRLAM +  GF+ QA +T
Sbjct: 227 GRLAMFSMFGFFVQAIVT 234

[Close]

BLAST of Moc11g00170 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-44
Identity = 100/208 (48.08%), Postives = 125/208 (60.10%), Query Frame = 0


Query: 97  KALAREARKDSSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFN 156
           K +A+     S WYG +R ++LGP   E P YLTG+ PGDYG+D AGLS DP  F K   
Sbjct: 37  KTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96

Query: 157 FEILHARWAMLASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAG 216
            E++H RWAML +LG + PE+L  +G   F E +W++ G        LDYLG P   L  
Sbjct: 97  LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPS--LVH 156

Query: 217 SQGVIVIAICQVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAF 276
           +Q ++ I  CQVILM   E  R  G     PLG  +  D  YPGG  FDPL L++D  AF
Sbjct: 157 AQSILAIWACQVILMGAVEGYRVAG----GPLGEVV--DPLYPGG-SFDPLGLAEDPEAF 216

Query: 277 EELKVKEIKNGRLAMVAWLGFYSQAALT 305
            ELKVKEIKNGRLAM +  GF+ QA +T
Sbjct: 217 AELKVKEIKNGRLAMFSMFGFFVQAIVT 234

[Close]

BLAST of Moc11g00170 vs. ExPASy Swiss-Prot
Match: P12470 (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 GN=CABE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-44
Identity = 99/205 (48.29%), Postives = 124/205 (60.49%), Query Frame = 0


Query: 100 AREARKDSSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEI 159
           A+     S WYG +R ++LGP   E P YLTG+ PGDYG+D AGLS DP  F K    E+
Sbjct: 41  AKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100

Query: 160 LHARWAMLASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQG 219
           +H RWAML +LG + PE+L  +G   F E +W++ G        LDYLG P   L  +Q 
Sbjct: 101 IHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPS--LVHAQS 160

Query: 220 VIVIAICQVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEEL 279
           ++ I  CQV+LM   E  R  G    EPLG  +  D  YPGG  FDPL L++D  AF EL
Sbjct: 161 ILAIWACQVVLMGAVEGYRVAG----EPLGEVV--DPLYPGG-SFDPLGLAEDPEAFAEL 220

Query: 280 KVKEIKNGRLAMVAWLGFYSQAALT 305
           KVKEIKNGRLAM +  GF+ QA +T
Sbjct: 221 KVKEIKNGRLAMFSMFGFFVQALVT 235

[Close]

BLAST of Moc11g00170 vs. ExPASy TrEMBL
Match: A0A6J1CK83 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012208 PE=3 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 2.5e-172
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPRLSNLRNSRSVPYRSTCKASWQELAGVLIFSA 60
           MAILQPHTSPSAIPSSSASFYGSSLQQPRLSNLRNSRSVPYRSTCKASWQELAGVLIFSA
Sbjct: 6   MAILQPHTSPSAIPSSSASFYGSSLQQPRLSNLRNSRSVPYRSTCKASWQELAGVLIFSA 65

Query: 61  IPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGP 120
           IPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGP
Sbjct: 66  IPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGP 125

Query: 121 IPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDI 180
           IPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDI
Sbjct: 126 IPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDI 185

Query: 181 SGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYC 240
           SGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYC
Sbjct: 186 SGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYC 245

Query: 241 GIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQ 300
           GIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQ
Sbjct: 246 GIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQ 305

Query: 301 AALT 305
           AALT
Sbjct: 306 AALT 309

[Close]

BLAST of Moc11g00170 vs. ExPASy TrEMBL
Match: A0A6J1FCV0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442842 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 3.3e-156
Identity = 276/308 (89.61%), Postives = 289/308 (93.83%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPR----LSNLRNSRSVPYRSTCKASWQELAGVL 60
           MA+ QPHTSPSAI SSSASFYGSSLQQ R      NLRNS S+P+R TC ASWQELAGVL
Sbjct: 3   MALFQPHTSPSAISSSSASFYGSSLQQLRSRTIALNLRNSPSIPHRFTCTASWQELAGVL 62

Query: 61  IFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPR 120
           IFSAIPFTAVKAIANSP GESLQRQ+EKKK AA+A SSKFKALA +ARKDSSWYGE+RPR
Sbjct: 63  IFSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPR 122

Query: 121 WLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPE 180
           WLGP+PY YPKYLTG+LPGDYGFDIAGLS+DPVAF+KYFNFEILHARWAMLASLGAL+PE
Sbjct: 123 WLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPE 182

Query: 181 ILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEY 240
           ILDI GAFHF+EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEY
Sbjct: 183 ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEY 242

Query: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300
           ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Sbjct: 243 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 302

Query: 301 FYSQAALT 305
           FYSQAALT
Sbjct: 303 FYSQAALT 310

[Close]

BLAST of Moc11g00170 vs. ExPASy TrEMBL
Match: A0A1S3BWE1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493859 PE=3 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.8e-155
Identity = 272/308 (88.31%), Postives = 292/308 (94.81%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPR----LSNLRNSRSVPYRSTCKASWQELAGVL 60
           MA++QPHT  S+I SSSASFYG+ LQQ R      NLR++ S+ +RSTC+ASWQELAGVL
Sbjct: 37  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 96

Query: 61  IFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPR 120
           IFSA+PFTAVKAIANSPLGESLQRQ+EKKK++A+ANSSKFKALA EARKDSSWYGEERPR
Sbjct: 97  IFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPR 156

Query: 121 WLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPE 180
           WLGP+PY+YPKYLTG+LPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PE
Sbjct: 157 WLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPE 216

Query: 181 ILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEY 240
           ILDI GAFHF+EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEY
Sbjct: 217 ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEY 276

Query: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300
           ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Sbjct: 277 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 336

Query: 301 FYSQAALT 305
           FYSQAALT
Sbjct: 337 FYSQAALT 344

[Close]

BLAST of Moc11g00170 vs. ExPASy TrEMBL
Match: A0A6J1IGJ6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111474607 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 6.2e-155
Identity = 272/308 (88.31%), Postives = 288/308 (93.51%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPR----LSNLRNSRSVPYRSTCKASWQELAGVL 60
           MA+  PHTSPSA+ SSSASFYGSSLQQ R      NLRNS S+P+R TC ASWQELAG+L
Sbjct: 3   MALFHPHTSPSAVSSSSASFYGSSLQQLRSRTIALNLRNSPSIPHRFTCTASWQELAGIL 62

Query: 61  IFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPR 120
           IFSAIPFTAVKAIANSP GESLQRQ+EKKK AA+A SSKFKALA +ARKDSSWYGE+RPR
Sbjct: 63  IFSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPR 122

Query: 121 WLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPE 180
           WLGP+PY YPKYLTG+LPGDYGFDIAGLS+DPVAF+KYFNFEILHARWAMLASLGAL+PE
Sbjct: 123 WLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPE 182

Query: 181 ILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEY 240
           ILDI GAFHF+EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEY
Sbjct: 183 ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEY 242

Query: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300
           ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLS+DAAAFEELKVKEIKNGRLAMVAWLG
Sbjct: 243 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSEDAAAFEELKVKEIKNGRLAMVAWLG 302

Query: 301 FYSQAALT 305
           FYSQAALT
Sbjct: 303 FYSQAALT 310

[Close]

BLAST of Moc11g00170 vs. ExPASy TrEMBL
Match: A0A5A7VCG1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G004020 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 3.4e-153
Identity = 270/308 (87.66%), Postives = 290/308 (94.16%), Query Frame = 0


Query: 1   MAILQPHTSPSAIPSSSASFYGSSLQQPR----LSNLRNSRSVPYRSTCKASWQELAGVL 60
           MA++QPHT  S+I SSSASFYG+ LQQ R      NLR++ S+ +RSTC+ASWQELAGVL
Sbjct: 1   MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVL 60

Query: 61  IFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPR 120
           IFSA+PFTAVKAIANSPLGESLQRQ+EKKK++A+ANSSKFKALA EARKDSSWYGEERPR
Sbjct: 61  IFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPR 120

Query: 121 WLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPE 180
           WLGP+PY+YPKYLTG+LPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PE
Sbjct: 121 WLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPE 180

Query: 181 ILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEY 240
           ILDI GAFHF+EPIWWRVGYSKLK  TLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEY
Sbjct: 181 ILDIFGAFHFTEPIWWRVGYSKLKVYTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEY 240

Query: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300
           ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Sbjct: 241 ARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG 300

Query: 301 FYSQAALT 305
           FYSQAALT
Sbjct: 301 FYSQAALT 308

[Close]

BLAST of Moc11g00170 vs. TAIR 10
Match: AT1G76570.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 466.8 bits (1200), Expect = 1.6e-131
Identity = 224/293 (76.45%), Postives = 257/293 (87.71%), Query Frame = 0


Query: 15  SSSASFYGSSLQQPRL--SNLRNSRSV-PYRSTCKASWQELAGVLIFSAIPFTAVKAIAN 74
           SS +S Y S    PR+  S  RN  +V   RS C+ASWQELAGVL+FSAIPFTAVKAIAN
Sbjct: 9   SSLSSSYSSIHSLPRILVSKPRNRIAVTKSRSICRASWQELAGVLVFSAIPFTAVKAIAN 68

Query: 75  SPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGPIPYEYPKYLTG 134
           S +G SL+R++E+KK+ A+ NSS+FK+ A+EAR DS WYG+ERPRW GPIPY+YP YLTG
Sbjct: 69  SSIGVSLRRRLEEKKKEAVENSSRFKSKAQEARNDSKWYGKERPRWFGPIPYDYPPYLTG 128

Query: 135 DLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDISGAFHFSEPIW 194
           +LPGDYGFDIAGL KD + F KYFNFEILHARWAMLA+LGALIPE+ D++G FHF+EP+W
Sbjct: 129 ELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVFDLTGTFHFAEPVW 188

Query: 195 WRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYCGIEALEPLGIY 254
           WRVGYSKL+G+TL+YLGIPGLH+AGSQGVIVIAICQV+LMVGPEYARYCGIEALEPLGIY
Sbjct: 189 WRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYARYCGIEALEPLGIY 248

Query: 255 LPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALT 305
           LPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGFY+QAA T
Sbjct: 249 LPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFT 301

[Close]

BLAST of Moc11g00170 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-45
Identity = 99/198 (50.00%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 107 SSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAM 166
           S WYG +RP++LGP     P YLTG+ PGDYG+D AGLS DP  F K    E++H+RWAM
Sbjct: 48  SIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 107

Query: 167 LASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 226
           L +LG   PEIL  +G   F E +W++ G        LDYLG P  +L  +Q ++ I  C
Sbjct: 108 LGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWAC 167

Query: 227 QVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKN 286
           QV+LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KN
Sbjct: 168 QVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKVKELKN 227

Query: 287 GRLAMVAWLGFYSQAALT 305
           GRLAM +  GF+ QA +T
Sbjct: 228 GRLAMFSMFGFFVQAIVT 235

[Close]

BLAST of Moc11g00170 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-44
Identity = 98/198 (49.49%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 107 SSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAM 166
           S WYG +RP++LGP     P YLTG+ PGDYG+D AGLS DP  F K    E++H+RWAM
Sbjct: 47  SIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106

Query: 167 LASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 226
           L +LG   PEIL  +G   F E +W++ G        LDYLG P  +L  +Q ++ I   
Sbjct: 107 LGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWAV 166

Query: 227 QVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKN 286
           QV+LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KN
Sbjct: 167 QVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKVKELKN 226

Query: 287 GRLAMVAWLGFYSQAALT 305
           GRLAM +  GF+ QA +T
Sbjct: 227 GRLAMFSMFGFFVQAIVT 234

[Close]

BLAST of Moc11g00170 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-44
Identity = 98/198 (49.49%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 107 SSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAM 166
           S WYG +RP++LGP     P YLTG+ PGDYG+D AGLS DP  F K    E++H+RWAM
Sbjct: 47  SIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106

Query: 167 LASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 226
           L +LG   PEIL  +G   F E +W++ G        LDYLG P  +L  +Q ++ I   
Sbjct: 107 LGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWAV 166

Query: 227 QVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKN 286
           QV+LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KN
Sbjct: 167 QVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKVKELKN 226

Query: 287 GRLAMVAWLGFYSQAALT 305
           GRLAM +  GF+ QA +T
Sbjct: 227 GRLAMFSMFGFFVQAIVT 234

[Close]

BLAST of Moc11g00170 vs. TAIR 10
Match: AT5G54270.1 (light-harvesting chlorophyll B-binding protein 3 )

HSP 1 Score: 175.6 bits (444), Expect = 7.5e-44
Identity = 90/196 (45.92%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 109 WYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLA 168
           WYG +R ++LGP   + P YLTG+ PGDYG+D AGLS DP AF K    E++H RWAML 
Sbjct: 47  WYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106

Query: 169 SLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQV 228
           + G + PE+L       F EP+W++ G        LDYLG P  +L  +Q ++ +   QV
Sbjct: 107 AFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAVLGFQV 166

Query: 229 ILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGR 288
           ILM   E  R  G++ +        G+  YPGG  FDPL L+ D   F ELKVKEIKNGR
Sbjct: 167 ILMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGR 226

Query: 289 LAMVAWLGFYSQAALT 305
           LAM +  GF+ QA +T
Sbjct: 227 LAMFSMFGFFVQAIVT 234

The following BLAST results are available for this feature:

BLAST of Moc11g00170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141964.1	5.2e-172	100.00	chlorophyll a-b binding protein 7, chloroplastic [Momordica charantia]	[more]
XP_023521109.1	3.1e-156	89.94	chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6591186.1	6.8e-156	89.61	Chlorophyll a-b binding protein 7, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022936160.1	6.8e-156	89.61	chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]	[more]
XP_008453032.2	5.8e-155	88.31	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis m...	[more]

BLAST of Moc11g00170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9K1	2.3e-130	76.45	Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P07370	2.3e-45	48.56	Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P14278	1.1e-44	50.00	Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
P27493	1.5e-44	48.08	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P12470	1.5e-44	48.29	Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia OX...	[more]

BLAST of Moc11g00170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CK83	2.5e-172	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1FCV0	3.3e-156	89.61	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A1S3BWE1	2.8e-155	88.31	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1IGJ6	6.2e-155	88.31	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7VCG1	3.4e-153	87.66	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Moc11g00170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76570.1	1.6e-131	76.45	Chlorophyll A-B binding family protein	[more]
AT3G27690.1	1.4e-45	50.00	photosystem II light harvesting complex gene 2.3	[more]
AT2G05100.1	2.0e-44	49.49	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	2.0e-44	49.49	photosystem II light harvesting complex gene 2.2	[more]
AT5G54270.1	7.5e-44	45.92	light-harvesting chlorophyll B-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 116..314 e-value: 3.8E-59 score: 201.9
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 126..301 e-value: 1.1E-41 score: 143.0
None	No IPR available	PANTHER	PTHR21649:SF74	CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC	coord: 42..304
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 108..305
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 42..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g00170.1	Moc11g00170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding