Moc10g29610 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g29610
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Mediator of RNA polymerase II transcription subunit 10
Location	chr10: 22375576 .. 22379851 (+)
RNA-Seq Expression	Moc10g29610
Synteny	Moc10g29610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGGCTCAGAATGCATCTTCAGCTGCTGGGACTGGTGGAAGTGGTGGCAATGGATCAGTCATTAACGATACATCAGCATCGGCAACAGTGGATGACTCGAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAGACTTTGGGCCTCCTCCATCAGCTTAACCTCACCGTTTCTAACTTCAATGCGGCTTATCAGCTGCCTCTTTTACAACGCCTGTATGCTGATTTTGCTTCATCTAATATCTAATTCTTTATTATCTCCGTATTCCACTGAGTCCACTCTTTACCAGTGATATTCTTCTTGACTTTACAGTAATTCTCTCGTTATGGAGCTAGATAACATGGTTAAATTATCAGAGAAATGCAACATACAGGTTCCTATGGAGGTTCTTAAGTGAGTCTTCGCACCACCTTTTTTGATCTCTAACTCTGCGAACTTTTTCTATTTTGTACACTACATGGTTCTCTTGGTCCAATTCTTACTTTTCTTTTAATTAGTTTGATCGATGATGGGAAGAATCCGGATGAATTCACGAGGGACGTAATAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCGTTCAAGGTAGTCTTTATGTCCCTATGTGACAGGCTGTTAAAATCTACTTCACTCATATTTGTATCTTGATTTTCAAAAATTCACAAAAATATTTACTGAACCTTGTACCACATACTATCTTCAGGGTTTACGGAAGCATCTTTTGGAGGAACTTGAACAGACATTTCCTGATGAAGTCGAGTCATACAGAGAAATTCGTGCTGCTTCTGCTGCTGTGAGTTATGATTTCATTTCTGCTATCAATTTTATTCTACCTTCAAATATTTCTCAAAATCATCTTTTTGTTTTTTCATTTTCAAACTTATCAAGAATATTTTATTGGCTTTTATGGATTAACTTTTGCTTTGTATCTACTATCTATAACCATAAGCTATATGTTTTTGCAAAGTTTGCATCATCCTTTCTTGACCAGCACTTCTAGCTATTTATATCTTTTTAGTGGTTTTAGACCTCAAACATCAGAAAATTTAAATATGTTATGGTGTCAGTTATAGGTATAGTTGGATGTCCATTGCTTTAATTATATGGTAAGTTATTGAAGATTCACTTAACTGCATAGGAGTATTTTTAATATAAGATATTGAACGATTTGTTTTCTGTTGATTTGAGTTTGTGTGTAGGCAATAGTTGCTTTATTATATGGTTTCTATTGGTTTTCTCATATTGTCGAAGAATGAGATCGACTAAGTTGCTTTTTGTTTTATGCTTCATAGGATGATTGAATTCTGCTTGCTTAAATAACTTCTTTGTGGTTATTTTATAAACATCTCTTAAGCCGGAATTCCAATATTCTCCTCTGTGAATGAAAGGAGTTAGATGTTTTTAGAATCAGATTGAAGTACTTTAGCGTATAGTTAGTTGAATGTTGTTTTGTGATTAGCTTATATGAAGTAAATGACTTGAAATACTAACTTGCCTTGAAGTCTATAATTACCCTTCCACTGTTGAACTTGCGCCAGATGATTGATAGTTTTTTTCTAAAAAAAACCATGATAGTGATGATCAGTGATCACTGTTATTCCATCTAGTGTCTGTCTCTATCTATGCTCTGGGTTTCACTCGATCATTACTAAATTTTTCATGATATTAAGGTTTTTGGATCATGTGGTCAAGTGTGGAATTATGGTACTGGAGTTTCCATACTTGGTGGCAGTTTTAACTTTAAGTTTCACTGTTGATGATCACTAATTTACACTTAAGTGATTATGTAATGCGGAGTTGCTTCTTGTAAGGCAGTTATATAACTTATATTGTATTAGGACATTAGAACGAGTGTGAGTCGTGTGATTTAGTTAGATACAAAAATTTTGATAGTGGCTAGAATTTTATTGCAATATCAAAGTGGTACGCCGTGGTGATTGCCTAGGGCTATCTCTCTTCTGAAAAATTTTTCTACGAGATTGCTCAACTCTTACTTGCCTGTTGCCTTGCTCACACTATTTATAACCAACCTTTTCTAGTAAGCTCATTATCTAATAGCTAATTTACCCATCTAAATTATAATATTCCACTACCTCCAAAACACACTATTTTTTTCCCCTTTTGATTGACTACTTTCGTTGAGAACAAATGAAAGAATATAAGGGGGCAATACAAAAAAGAAAAGCCCAAGCAAAAAGGAGTCGAGATGAATCCAAAACAAAAGAAAAAGAAGAAAGAGAAACAAATTACAAAAGGGGCTCCAATTCAAAATTCAAAAGAATGAGAGGTAAAGGAAAATCACTAAAGTTCTTGGTGATGGAAACCTAAAGGGGTGCGTTGAATTGAGCCAAGTCCCAAATTCCTCCCAAAGAGTTTCTCTTGTCACTAAAGATTCTCCTCTCTCAAGTCGTATGTTCCATAAAATAGCAAAAATTGCTGCTTGCTGCAGAAACATCCCTTTTATCACGAAAGGAGGTGAAACAGCACCTCGTCCAAGCATGCGCTGGGACGATTTGAAGACGGAATAGATACTACATCCATATAATCTTGCTTGAGATACGAGGTTCATCCAGACTCGAAACATCTTTAATTAGACCAGAATTACAGAATCTAAGCGGCAAATCCTTTCCAGTCATCTAGTAATTCATTGGTGGCTCGGCTCTCCTCATAAATGTCTGCAAGAGTTATAGAACTATGCCCCATAAGAGGGTGTTTATTTTTGGTTAATAAAATGATCATAAGAGTTCATCTTTGCTCATTTTTCCCTGTTTGCATCCTTTCATTGCGCTTTCTGGACTCTGGTTGAATTGTTTGATTTCTCCCCTTCAACTACCACCCCAACCCATAATATCGGTAGTTGTGTTTTTATTTTCGTTTGTTGCTTTCATTATTTTTTCTTGAAATCGTGCCCATTTATTTTCACTTCCAAGAAAATTCTTAAGCAAGCAGATAGCACACAGTTCTTCAACCCATTTTGTTGGTTCTTTCCAGGCTCGTGTACCATTCAAGAGATTTGAAAAATACAACCCAAAGTTTGTCCCATGCAACACCCAACCCCAAAATTATTCTCAACTGTAATTTGCACTATTCGTGAATCCCCTCCTCGCTCCATCTCCTAGTATAACCACTCCTTGATGTTTTTTGTCATCAGAATCTTCAAATTATCAGGTGTGAGGAAGCTAAAGTGTTGCAAGGATTCTCTAAAAAGACGCTAAAGCTTTGATGCCCATCTGTACATGCAAGTACCTGAAATGAAATCAAAGGATCCTCTATTCTTGTTGACTGTTTGTCTCGCTCTACCACATTCGTTCCTTGAAGTCCTTGCCTACTTGTATATTTGCATCTGTTAAATTAGCACCAAAACTTTCTTTCTCCACCACTGCCAGATGATTTTGGTCTCTTTTGCCTCAGTCTGTATTGTATCGGCTTGATTTGCATGTTTCTTTTGCCCATATTTTTGCTTGATACCGTAGTGCTTTCTTACTATTTTGTCTCAAGTATAATTTTTCTTATCTGATGATGTTTAATTTGCGCTTGATAGTTCCTGGTTTTAAGTTTTAGATTTCTCCAGCTTCAATGATGGCTCTTTCTTTCTTTCCTTTTTTTTGTGTTTTTAATTTAATTTTTCCCCTCTAATTGCTTCTCTTTTCAACATTACTGGCAGACACAATTTTAGCCACCTGTTTCAATTTCATCTCCTCAAATGGCATCATTTTTGTTAACGCCATCTCTTTCTCCAATTTCTTTAATATCTCCAACCTTTGAGCAACATCTTCCTATGCTCTAGATTCTTTCCTGAGATCAAATGGCTCAGATATCTATTTGATAGAAACCTAATCTCGAGATTGAAAAGAAAATAAGGAATAAAGCTTGATTGCAATATTGAAATATGCAGGTGATAACCTCCCGAGAGGGCTGTAGGTCTCCCTCGACCTTTTCTTACAAACTCATCATCCCATAACTAATTTTATGCCCATGGCAATTATGAATTTGGTTAGCTCAAAACTTTTGCTTAGATATGTTGTGAGATCTTTTGATAGTGATGGAATCATATCGAGAAAAGAGAGAAAATCGGGAGTCGGAACTTTGCTCCTCTATACCCGGGACGGGGCAGTAGCATTGTTTATTATGTTTTCCTATTATTGAGCTCAAACTTTAGTCTTGTTGCAACTAATTGCAGGAAGCAAAAAGGATAGCGCAAGCGCAAAGTATGTTACCAAATGGAGATGTGAAGGTCAAGATGGAGGTTTAA

mRNA sequence

ATGGATTCGGCTCAGAATGCATCTTCAGCTGCTGGGACTGGTGGAAGTGGTGGCAATGGATCAGTCATTAACGATACATCAGCATCGGCAACAGTGGATGACTCGAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAGACTTTGGGCCTCCTCCATCAGCTTAACCTCACCGTTTCTAACTTCAATGCGGCTTATCAGCTGCCTCTTTTACAACGCCTTAATTCTCTCGTTATGGAGCTAGATAACATGGTTAAATTATCAGAGAAATGCAACATACAGGTTCCTATGGAGGTTCTTAATTTGATCGATGATGGGAAGAATCCGGATGAATTCACGAGGGACGTAATAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCGTTCAAGGGTTTACGGAAGCATCTTTTGGAGGAACTTGAACAGACATTTCCTGATGAAGTCGAGTCATACAGAGAAATTCGTGCTGCTTCTGCTGCTGAAGCAAAAAGGATAGCGCAAGCGCAAAGTATGTTACCAAATGGAGATGTGAAGGTCAAGATGGAGGTTTAA

Coding sequence (CDS)

ATGGATTCGGCTCAGAATGCATCTTCAGCTGCTGGGACTGGTGGAAGTGGTGGCAATGGATCAGTCATTAACGATACATCAGCATCGGCAACAGTGGATGACTCGAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAGACTTTGGGCCTCCTCCATCAGCTTAACCTCACCGTTTCTAACTTCAATGCGGCTTATCAGCTGCCTCTTTTACAACGCCTTAATTCTCTCGTTATGGAGCTAGATAACATGGTTAAATTATCAGAGAAATGCAACATACAGGTTCCTATGGAGGTTCTTAATTTGATCGATGATGGGAAGAATCCGGATGAATTCACGAGGGACGTAATAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCGTTCAAGGGTTTACGGAAGCATCTTTTGGAGGAACTTGAACAGACATTTCCTGATGAAGTCGAGTCATACAGAGAAATTCGTGCTGCTTCTGCTGCTGAAGCAAAAAGGATAGCGCAAGCGCAAAGTATGTTACCAAATGGAGATGTGAAGGTCAAGATGGAGGTTTAA

Protein sequence

MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTVSNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPNGDVKVKMEV

Homology

[Close]

BLAST of Moc10g29610 vs. NCBI nr
Match: XP_022145303.1 (mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145304.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145305.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia] >XP_022145306.1 mediator of RNA polymerase II transcription subunit 10b-like [Momordica charantia])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDVKVKMEV 190
           GDVKVKMEV
Sbjct: 181 GDVKVKMEV 189

[Close]

BLAST of Moc10g29610 vs. NCBI nr
Match: XP_008448559.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448560.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448561.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS S TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDVKVKMEV 190
           GD+KVKMEV
Sbjct: 181 GDMKVKMEV 189

[Close]

BLAST of Moc10g29610 vs. NCBI nr
Match: XP_038876576.1 (mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876578.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876579.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876580.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida])

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-89
Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGS GNGSVINDTSAS TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSSGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCAIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDVKVKMEV 190
           GD+KVKMEV
Sbjct: 181 GDMKVKMEV 189

[Close]

BLAST of Moc10g29610 vs. NCBI nr
Match: XP_022923485.1 (mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923486.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923487.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923488.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923489.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923491.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923492.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022965379.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965380.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965381.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965383.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965384.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965385.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965386.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_023553208.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553209.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553210.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553211.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553212.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338.6 bits (867), Expect = 3.5e-89
Identity = 179/189 (94.71%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSAS TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+QSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQSMLPN 180

Query: 181 GDVKVKMEV 190
           GD+KVKME+
Sbjct: 181 GDMKVKMEI 189

[Close]

BLAST of Moc10g29610 vs. NCBI nr
Match: XP_004146135.1 (mediator of RNA polymerase II transcription subunit 10b [Cucumis sativus] >XP_031739316.1 mediator of RNA polymerase II transcription subunit 10b [Cucumis sativus] >KAE8650007.1 hypothetical protein Csa_009833 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 4.6e-89
Identity = 181/189 (95.77%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDT  S TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTPVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDVKVKMEV 190
           GD+KVKMEV
Sbjct: 181 GDMKVKMEV 189

[Close]

BLAST of Moc10g29610 vs. ExPASy Swiss-Prot
Match: F4HPA7 (Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana OX=3702 GN=MED10B PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66
Identity = 142/193 (73.58%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---INDTSASATV-DDSKQNLNQVINSIQKTLGLLHQL 60
           MD  QN S  AG GGS  NG++    ND +++ TV DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLVMELDNM KLSEKCNIQ+PMEVLNLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VINSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQS 180
           V+NSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA  KR+AQ+QS
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQS 180

Query: 181 MLPNGDVKVKMEV 190
           +LPNGD KVK E+
Sbjct: 181 VLPNGDAKVKNEL 189

[Close]

BLAST of Moc10g29610 vs. ExPASy Swiss-Prot
Match: Q9FHZ2 (Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana OX=3702 GN=MED10A PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-63
Identity = 138/190 (72.63%), Postives = 157/190 (82.63%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MD  QN  + AG G    NGS+  + +A ATVDDS + LNQ+INS QK L LLHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVIN- 120
           S+F  A QL LLQRLNSLVMELDNM KLS+KCNIQVP+EVLNLIDDGKNPDEFT+DV+N 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLP 180
           +CIAKNQ TKGK+DAFKGLRKHLLEELEQ FPDEV+ YR+IRA+ AAEAKR+AQ QS+LP
Sbjct: 121 NCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRLAQTQSVLP 180

Query: 181 NGDVKVKMEV 190
           NGD KVK E+
Sbjct: 181 NGDAKVKSEL 186

[Close]

BLAST of Moc10g29610 vs. ExPASy Swiss-Prot
Match: Q16G71 (Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 GN=MED10 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.4e-17
Identity = 43/123 (34.96%), Postives = 76/123 (61.79%), Query Frame = 0


Query: 39  LNQVINSIQKTLGLLHQLNLTVSNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPM 98
           L  + N ++  +  + Q+ + VS+F    Q  L Q++ SLV  L  + KL  + ++ VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQVDVNVPL 64

Query: 99  EVLNLIDDGKNPDEFTRDVINSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYR 158
           EV + ID G+NP  +T+D I+  + KN+  KGK D+++  + +L++EL++TFP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELDETFPTEIAKYK 124

Query: 159 EIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Moc10g29610 vs. ExPASy Swiss-Prot
Match: Q7Q5R5 (Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7165 GN=MED10 PE=3 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-16
Identity = 43/123 (34.96%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 39  LNQVINSIQKTLGLLHQLNLTVSNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPM 98
           L  + N ++  +  + Q+ + VS+F    Q  L Q++ SLV  L  + KL  + ++ VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQIDVNVPL 64

Query: 99  EVLNLIDDGKNPDEFTRDVINSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYR 158
           EV + ID G+NP  +T+D I+  + KN+  KGK D+++  + +L++EL +TFP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELSETFPVEISKYK 124

Query: 159 EIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Moc10g29610 vs. ExPASy Swiss-Prot
Match: Q9CXU0 (Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 GN=Med10 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-14
Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 46  IQKTLGLLHQLNLTVSNFNAAYQLPLLQRLNSLVMELDNMVKLSEKC-NIQVPMEVLNLI 105
           ++K +  + QL + VS+F  + Q  L Q+LN +V  L ++ K  ++  +I VP+EV   I
Sbjct: 12  LEKFVENIRQLGIIVSDFQPSSQAGLSQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYI 71

Query: 106 DDGKNPDEFTRDVINSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIR 162
           D G+NP  +T++ +   +AKN+  KGK D  K  +  L++EL + FP+++  YR IR
Sbjct: 72  DQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIR 128

[Close]

BLAST of Moc10g29610 vs. ExPASy TrEMBL
Match: A0A6J1CVZ0 (Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX=3673 GN=LOC111014791 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.7e-93
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDVKVKMEV 190
           GDVKVKMEV
Sbjct: 181 GDVKVKMEV 189

[Close]

BLAST of Moc10g29610 vs. ExPASy TrEMBL
Match: A0A1S3BJY3 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 GN=LOC103490703 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.9e-90
Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS S TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180

Query: 181 GDVKVKMEV 190
           GD+KVKMEV
Sbjct: 181 GDMKVKMEV 189

[Close]

BLAST of Moc10g29610 vs. ExPASy TrEMBL
Match: A0A6J1HLJ2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111465259 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.7e-89
Identity = 179/189 (94.71%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSAS TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+QSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQSMLPN 180

Query: 181 GDVKVKMEV 190
           GD+KVKME+
Sbjct: 181 GDMKVKMEI 189

[Close]

BLAST of Moc10g29610 vs. ExPASy TrEMBL
Match: A0A6J1E6X8 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111431167 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.7e-89
Identity = 179/189 (94.71%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSAS TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+QSMLPN
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQSMLPN 180

Query: 181 GDVKVKMEV 190
           GD+KVKME+
Sbjct: 181 GDMKVKMEI 189

[Close]

BLAST of Moc10g29610 vs. ExPASy TrEMBL
Match: A0A0A0L3Q2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=3659 GN=MED10 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 181/189 (95.77%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDT  S TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 61  MDSAQNASSAAGTGGSGGNGSVINDTPVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 120

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDV+NS
Sbjct: 121 SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 180

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN
Sbjct: 181 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPN 240

Query: 181 GDVKVKMEV 190
           GD+KVKMEV
Sbjct: 241 GDMKVKMEV 249

[Close]

BLAST of Moc10g29610 vs. TAIR 10
Match: AT1G26665.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 258.5 bits (659), Expect = 4.3e-69
Identity = 144/193 (74.61%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---INDTSASATV-DDSKQNLNQVINSIQKTLGLLHQL 60
           MD  QN S  AG GGS  NG++    ND +++ TV DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLVMELDNM KLSEKCNIQ+PMEVLNLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VINSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQS 180
           V+NSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAAEAKR+AQ+QS
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAEAKRLAQSQS 180

Query: 181 MLPNGDVKVKMEV 190
           +LPNGD KVK E+
Sbjct: 181 VLPNGDAKVKNEL 189

[Close]

BLAST of Moc10g29610 vs. TAIR 10
Match: AT1G26665.2 (Mediator complex, subunit Med10 )

HSP 1 Score: 254.2 bits (648), Expect = 8.1e-68
Identity = 142/193 (73.58%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---INDTSASATV-DDSKQNLNQVINSIQKTLGLLHQL 60
           MD  QN S  AG GGS  NG++    ND +++ TV DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLVMELDNM KLSEKCNIQ+PMEVLNLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VINSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQS 180
           V+NSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA  KR+AQ+QS
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQS 180

Query: 181 MLPNGDVKVKMEV 190
           +LPNGD KVK E+
Sbjct: 181 VLPNGDAKVKNEL 189

[Close]

BLAST of Moc10g29610 vs. TAIR 10
Match: AT5G41910.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 244.2 bits (622), Expect = 8.4e-65
Identity = 138/190 (72.63%), Postives = 157/190 (82.63%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60
           MD  QN  + AG G    NGS+  + +A ATVDDS + LNQ+INS QK L LLHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVIN- 120
           S+F  A QL LLQRLNSLVMELDNM KLS+KCNIQVP+EVLNLIDDGKNPDEFT+DV+N 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLP 180
           +CIAKNQ TKGK+DAFKGLRKHLLEELEQ FPDEV+ YR+IRA+ AAEAKR+AQ QS+LP
Sbjct: 121 NCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRLAQTQSVLP 180

Query: 181 NGDVKVKMEV 190
           NGD KVK E+
Sbjct: 181 NGDAKVKSEL 186

The following BLAST results are available for this feature:

BLAST of Moc10g29610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145303.1	1.2e-92	100.00	mediator of RNA polymerase II transcription subunit 10b-like [Momordica charanti...	[more]
XP_008448559.1	1.2e-89	96.30	PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [C...	[more]
XP_038876576.1	2.1e-89	96.30	mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida]...	[more]
XP_022923485.1	3.5e-89	94.71	mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata...	[more]
XP_004146135.1	4.6e-89	95.77	mediator of RNA polymerase II transcription subunit 10b [Cucumis sativus] >XP_03...	[more]

BLAST of Moc10g29610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HPA7	1.1e-66	73.58	Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana ...	[more]
Q9FHZ2	1.2e-63	72.63	Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana ...	[more]
Q16G71	6.4e-17	34.96	Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 ...	[more]
Q7Q5R5	1.4e-16	34.96	Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7...	[more]
Q9CXU0	1.7e-14	35.90	Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 ...	[more]

BLAST of Moc10g29610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVZ0	5.7e-93	100.00	Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX...	[more]
A0A1S3BJY3	5.9e-90	96.30	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1HLJ2	1.7e-89	94.71	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=36...	[more]
A0A6J1E6X8	1.7e-89	94.71	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=...	[more]
A0A0A0L3Q2	2.2e-89	95.77	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=365...	[more]

BLAST of Moc10g29610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26665.1	4.3e-69	74.61	Mediator complex, subunit Med10	[more]
AT1G26665.2	8.1e-68	73.58	Mediator complex, subunit Med10	[more]
AT5G41910.1	8.4e-65	72.63	Mediator complex, subunit Med10	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019145	Mediator complex, subunit Med10	PFAM	PF09748	Med10	coord: 45..158 e-value: 6.4E-30 score: 103.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR13345:SF9	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10A-RELATED	coord: 1..188
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g29610.1	Moc10g29610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity