Moc10g29400 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCTGGAAATTTCAACTTTCTGCAATTCTCAAGGCTCACAAGCTTTTTGGCTTCATCGATGGAACTGTTCCTCTTCCAAGTCGATATCTACTGGTTGAATCTTCCGATTCTACTGCAACTCAATCCGGCCTTTGATGATTGGATTGCAAAAGATCAAGCTCTAATGACCTTAATCAATGCCGCACTCGCCTACATTGTTGGCAGCGGAACTTCGAAAGAGGTATGGGAGGTTCTTGAAAAGCATTATTCGTCAAGTAGCAGAACGAATATAGTTAATCTCAAGACAGATTTGCAGACAATATCCAAGAAACCTGGTGAGTCAATCAGTGAGTATGTAAAACGTATTAAAGAAGTTAAAGAAAAACTTGCAAACGTCTCTGTTATAATCAATGAAGAGGATCGGTTGATATACACTTTGAATGGGTTACCTACTGAATACAGTACGTTTCGGACATCGATGAGAACTCGTTCTCATCCAATCTCTTTCGAAGAATTACATGTATTGTTATTGTCCGAAGAATCTGCCATTGGAAAACAGGATAAGCGCGATGAACCTTTTCCACAGCCCTCCGCAATGATTGCTTCTTCTCAGCAACGCAATTTTCGTGGAAAATCATTTGCTCCTGGTCAATTTCGTGGTAGATCGACTCATGGACATACTGGTCGAGGTAGAATCTCCTCTAATGGAACTAACAATTCAGGAGGACATCGAGGCCGTAATCCTACCGGTTTTCCTTTCACCCCTATACGAACCAGTGGCACAAATGATGGCAGAATTTTGTGCCAAATCTGTAATCGACCTGGGCATACAGCTATTGATTGTTATAACCGCATGAACTATAATTACCAAGACAGGCATCCTCCACAGCAACTTGCAGCCATGGTTGCTTCACAAAATCAGCAGTTCGCTTCTGGTTTACCTGCTTTTCAATCAACACCCTGGCTTGTTGATTCAGGGTGCAATACACATGTGACTGTTGACTTAAATCACTTGTTTGTTGCATCTGAATACAATGGAGAAGATCAAGTATCGGTCGGTAGTGGACAGTCACTTCCAATTACCCATTCAGGTTGCGGAGTTCTTCAAACTCCTTCCTCTTCCCTATCTCTTCTCAAATTATTCCATGTTCCAAGTATTGCTGCCAATTTATTATCAGTTCATCAACTTTGTACTGATAACAATTGTCTTCTTATTTTTGACTCTACTCATTTCACAATACAGGACAAAGTCTCGGGTCACATCCTTTTCCAAGGACCTAGTGTCAATGGTCTATACCCTATCGCACCATCTGATAGTTCATCTCCTTCAAGTGCCTTCCTTGCATCAAATGGACCCGTTGCTCATGTCAACACTAAGTCTTTCTCCTCCATGTGGCATAACCGGTTAGGGCACCCAGGTTCTGATATTCTTCATTCTGTTATGAAGCTCTTAAATTTACCTTGTTCTCGTTCAGTTAAATGTGTCTGTGAACACTGTCTACATGGCAAAATGATAAAATTGCCTTTTTCGTTCTACTTCTTTTTCATTGTATCCTCTTGAAATAATACATTTTGATGTATGGGGCCCTGCCCCTGAACCTTCTATTTATGGTTACAAATATTATGTTTCTTTTGTGGATGACATGTCCCGATATACTTGGTTTTTTCCACTTAAAATCTAATGTGTTTCATATATTTGTCAAGTTCAAACCTTTAGTTGAAAACATACTAAACTCCCATATCAAGACTTTTCGTAGTGACGGTGGGGGAGAATTTGTTAATCATCATTTTAACTCTCTGTTAAATATTCATGGCATTCTCCACCAAAAATCATGTGCCTACACCCCTGAACAAAATGGTGTGGCCGAACGAAAACACCGACATATTGTAGAAATGGCCTTATCCTTAATTTCCACATCCTCTCTGCCTCTCAAATTTTGGCCCTATGCTTTTGCCACAGCTGTTTTCCTTATTAATCGTCTTCCTTCTTCCATTCTAGGTGGTAAATCTCCTTTTGAATGTCTTTATAATCGGCTACCGGATTACTCACATCTTCGTACCTTTGGTTGTGCCTGTTACCCTCTTCTTAAACCCTATCATTCTCATAAACTCCAGCCAAAAACATCTCGGTGTGTCTTTCTTGGTTATCCCTTGGATTACAAAGGCTATATGTGTTATGACATGAGTAATGCCAAAATCTATACCACTCGCCATGTTATTTTTTACGAAACTTTTTTTCCTTTTTCCAATTCACCTGTGCCCTCCTCTTCTTCTTCTCCATTATCTTCACCTTCTTCTTCATCTTCTTCTGTTCTTTCTTTATTACCCTATTTTTTGTCATCTCCTTCTTCCAATACTTCTGATTCACCTACAATTGCACCCACTACTGCCTCGGTTCTTCATCCTCCTCTTTATTCTAATGCAATAGCTGGTGGTGATGGTTCAAATGGTGTTAATTGCCCATTGGATACAACAGATCATTCTAATACTACATTTCATTGTCCAAGTGATCCTTCTCATGTCAATGATGGTCATGCACATGGTACATCACCTACTACTGATATTATGTGTACTATCCCTGCAAGTGAACCTCTTTCCACGGCTGATGACTTGTCAAATCAGTCTACTGTACCTGTTATCTTTGATACATCTATCAAATGCAACAGGACTCGGTTTTAA ATGTCCTCTGGAAATTTCAACTTTCTGCAATTCTCAAGGCTCACAAGCTTTTTGGCTTCATCGATGGAACTGTTCCTCTTCCAAGTCGATATCTACTGGTTGAATCTTCCGATTCTACTGCAACTCAATCCGGCCTTTGATGATTGGATTGCAAAAGATCAAGCTCTAATGACCTTAATCAATGCCGCACTCGCCTACATTGTTGGCAGCGGAACTTCGAAAGAGGTATGGGAGGTTCTTGAAAAGCATTATTCGTCAAGTAGCAGAACGAATATAGTTAATCTCAAGACAGATTTGCAGACAATATCCAAGAAACCTGGTGAGTCAATCAGTGAGTATGTAAAACGTATTAAAGAAGTTAAAGAAAAACTTGCAAACGTCTCTGTTATAATCAATGAAGAGGATCGGTTGATATACACTTTGAATGGGTTACCTACTGAATACAGTACGTTTCGGACATCGATGAGAACTCGTTCTCATCCAATCTCTTTCGAAGAATTACATGTATTGTTATTGTCCGAAGAATCTGCCATTGGAAAACAGGATAAGCGCGATGAACCTTTTCCACAGCCCTCCGCAATGATTGCTTCTTCTCAGCAACGCAATTTTCGTGGAAAATCATTTGCTCCTGGTCAATTTCGTGGTAGATCGACTCATGGACATACTGGTCGAGGTAGAATCTCCTCTAATGGAACTAACAATTCAGGAGGACATCGAGGCCGTAATCCTACCGGTTTTCCTTTCACCCCTATACGAACCAGTGGCACAAATGATGGCAGAATTTTGTGCCAAATCTGTAATCGACCTGGGCATACAGCTATTGATTGTTATAACCGCATGAACTATAATTACCAAGACAGGCATCCTCCACAGCAACTTGCAGCCATGGTTGCTTCACAAAATCAGCAGTTCGCTTCTGGTTTACCTGCTTTTCAATCAACACCCTGGCTTGTTGATTCAGGGTGCAATACACATGTGACTGTTGACTTAAATCACTTGTTTGTTGCATCTGAATACAATGGAGAAGATCAAGTATCGGTCGGTAGTGGACAGTCACTTCCAATTACCCATTCAGGTTGCGGAGTTCTTCAAACTCCTTCCTCTTCCCTATCTCTTCTCAAATTATTCCATGTTCCAAGTATTGCTGCCAATTTATTATCAGTTCATCAACTTTGTACTGATAACAATTGTCTTCTTATTTTTGACTCTACTCATTTCACAATACAGGACAAAGTCTCGGGTCACATCCTTTTCCAAGGACCTAGTGTCAATGGTCTATACCCTATCGCACCATCTGATAGTTCATCTCCTTCAAGTGCCTTCCTTGCATCAAATGGACCCGTTGCTCATGTCAACACTAATGATCCTTCTCATGTCAATGATGGTCATGCACATGGTACATCACCTACTACTGATATTATGTGTACTATCCCTGCAAGTGAACCTCTTTCCACGGCTGATGACTTGTCAAATCAGTCTACTGTACCTGTTATCTTTGATACATCTATCAAATGCAACAGGACTCGGTTTTAA ATGTCCTCTGGAAATTTCAACTTTCTGCAATTCTCAAGGCTCACAAGCTTTTTGGCTTCATCGATGGAACTGTTCCTCTTCCAAGTCGATATCTACTGGTTGAATCTTCCGATTCTACTGCAACTCAATCCGGCCTTTGATGATTGGATTGCAAAAGATCAAGCTCTAATGACCTTAATCAATGCCGCACTCGCCTACATTGTTGGCAGCGGAACTTCGAAAGAGGTATGGGAGGTTCTTGAAAAGCATTATTCGTCAAGTAGCAGAACGAATATAGTTAATCTCAAGACAGATTTGCAGACAATATCCAAGAAACCTGGTGAGTCAATCAGTGAGTATGTAAAACGTATTAAAGAAGTTAAAGAAAAACTTGCAAACGTCTCTGTTATAATCAATGAAGAGGATCGGTTGATATACACTTTGAATGGGTTACCTACTGAATACAGTACGTTTCGGACATCGATGAGAACTCGTTCTCATCCAATCTCTTTCGAAGAATTACATGTATTGTTATTGTCCGAAGAATCTGCCATTGGAAAACAGGATAAGCGCGATGAACCTTTTCCACAGCCCTCCGCAATGATTGCTTCTTCTCAGCAACGCAATTTTCGTGGAAAATCATTTGCTCCTGGTCAATTTCGTGGTAGATCGACTCATGGACATACTGGTCGAGGTAGAATCTCCTCTAATGGAACTAACAATTCAGGAGGACATCGAGGCCGTAATCCTACCGGTTTTCCTTTCACCCCTATACGAACCAGTGGCACAAATGATGGCAGAATTTTGTGCCAAATCTGTAATCGACCTGGGCATACAGCTATTGATTGTTATAACCGCATGAACTATAATTACCAAGACAGGCATCCTCCACAGCAACTTGCAGCCATGGTTGCTTCACAAAATCAGCAGTTCGCTTCTGGTTTACCTGCTTTTCAATCAACACCCTGGCTTGTTGATTCAGGGTGCAATACACATGTGACTGTTGACTTAAATCACTTGTTTGTTGCATCTGAATACAATGGAGAAGATCAAGTATCGGTCGGTAGTGGACAGTCACTTCCAATTACCCATTCAGGTTGCGGAGTTCTTCAAACTCCTTCCTCTTCCCTATCTCTTCTCAAATTATTCCATGTTCCAAGTATTGCTGCCAATTTATTATCAGTTCATCAACTTTGTACTGATAACAATTGTCTTCTTATTTTTGACTCTACTCATTTCACAATACAGGACAAAGTCTCGGGTCACATCCTTTTCCAAGGACCTAGTGTCAATGGTCTATACCCTATCGCACCATCTGATAGTTCATCTCCTTCAAGTGCCTTCCTTGCATCAAATGGACCCGTTGCTCATGTCAACACTAATGATCCTTCTCATGTCAATGATGGTCATGCACATGGTACATCACCTACTACTGATATTATGTGTACTATCCCTGCAAGTGAACCTCTTTCCACGGCTGATGACTTGTCAAATCAGTCTACTGTACCTGTTATCTTTGATACATCTATCAAATGCAACAGGACTCGGTTTTAA MSSGNFNFLQFSRLTSFLASSMELFLFQVDIYWLNLPILLQLNPAFDDWIAKDQALMTLINAALAYIVGSGTSKEVWEVLEKHYSSSSRTNIVNLKTDLQTISKKPGESISEYVKRIKEVKEKLANVSVIINEEDRLIYTLNGLPTEYSTFRTSMRTRSHPISFEELHVLLLSEESAIGKQDKRDEPFPQPSAMIASSQQRNFRGKSFAPGQFRGRSTHGHTGRGRISSNGTNNSGGHRGRNPTGFPFTPIRTSGTNDGRILCQICNRPGHTAIDCYNRMNYNYQDRHPPQQLAAMVASQNQQFASGLPAFQSTPWLVDSGCNTHVTVDLNHLFVASEYNGEDQVSVGSGQSLPITHSGCGVLQTPSSSLSLLKLFHVPSIAANLLSVHQLCTDNNCLLIFDSTHFTIQDKVSGHILFQGPSVNGLYPIAPSDSSSPSSAFLASNGPVAHVNTNDPSHVNDGHAHGTSPTTDIMCTIPASEPLSTADDLSNQSTVPVIFDTSIKCNRTRF Homology
BLAST of Moc10g29400 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]) HSP 1 Score: 348.2 bits (892), Expect = 1.2e-91 Identity = 190/341 (55.72%), Postives = 240/341 (70.38%), Query Frame = 0
BLAST of Moc10g29400 vs. NCBI nr
Match: XP_016900446.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]) HSP 1 Score: 348.2 bits (892), Expect = 1.2e-91 Identity = 190/341 (55.72%), Postives = 240/341 (70.38%), Query Frame = 0
BLAST of Moc10g29400 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus]) HSP 1 Score: 346.7 bits (888), Expect = 3.5e-91 Identity = 191/342 (55.85%), Postives = 239/342 (69.88%), Query Frame = 0
BLAST of Moc10g29400 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia]) HSP 1 Score: 345.1 bits (884), Expect = 1.0e-90 Identity = 201/355 (56.62%), Postives = 245/355 (69.01%), Query Frame = 0
BLAST of Moc10g29400 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]) HSP 1 Score: 344.0 bits (881), Expect = 2.3e-90 Identity = 185/324 (57.10%), Postives = 232/324 (71.60%), Query Frame = 0
BLAST of Moc10g29400 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 5.2e-29 Identity = 127/492 (25.81%), Postives = 214/492 (43.50%), Query Frame = 0
BLAST of Moc10g29400 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.2e-23 Identity = 112/442 (25.34%), Postives = 196/442 (44.34%), Query Frame = 0
BLAST of Moc10g29400 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 7.0e-10 Identity = 88/359 (24.51%), Postives = 145/359 (40.39%), Query Frame = 0
BLAST of Moc10g29400 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 5.8e-92 Identity = 190/341 (55.72%), Postives = 240/341 (70.38%), Query Frame = 0
BLAST of Moc10g29400 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 5.8e-92 Identity = 190/341 (55.72%), Postives = 240/341 (70.38%), Query Frame = 0
BLAST of Moc10g29400 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 4.9e-91 Identity = 201/355 (56.62%), Postives = 245/355 (69.01%), Query Frame = 0
BLAST of Moc10g29400 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.1e-90 Identity = 185/324 (57.10%), Postives = 232/324 (71.60%), Query Frame = 0
BLAST of Moc10g29400 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 4.2e-90 Identity = 184/323 (56.97%), Postives = 231/323 (71.52%), Query Frame = 0
BLAST of Moc10g29400 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 1.2e-04 Identity = 45/178 (25.28%), Postives = 85/178 (47.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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