Moc10g29010 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g29010
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	binding partner of ACD11 1-like isoform X2
Location	chr10: 21857593 .. 21860418 (+)
RNA-Seq Expression	Moc10g29010
Synteny	Moc10g29010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGGTTTTGTGTAAATTTTTATTTTCATTTCTGATCTTTTTTTTTTCCGTTTAATTTTTTGCAAAGATCGAGTGATGTTCTGGTGCAGTGAAAGTGAACGGTCTCAAACTGCTTACGTAACCTTTAAAGATGCACAAGGAGCTGAAACTGCCGTCCTTCTATCTGTAAGTTCACTTTGTAGACAATGCCTCTAGTTCTCAGTAATTATAGAAGTTTTATTCCCCATTGGCAGGAATTTAAGATATGACCATTGAAGATTAGAATTATTATTGGAGCTGTTTGTCAAAGTTGAAATATTTGTGGTGGTATAGTTGTTTAATATTAAAAAAGGATTATAAAAATACAGTTACAGGATGGTGTTCTTGGCTGTTATTGGTGGTCGCATAGCCTTGTCCAGGGAGAGCATGGTGCTTTAACTATACTAGGGAGAGAATAGAAAGGGCTTTCGAAGGGGGATCGAGTGGGTGATGGGCAACTGGCTAAGGGAGAAACTAAATCTCTTTGTTTGTTTTCTTCATTTATACCTTACCCCCGATGTTTTAAAACTCCTTTGAGACATAAGCAGAAAGGCCTTCGAAGGGGGGTCAAATGGGTGATGGGTAACAACCGGCTAAGGGATAAGGGGAGATTTTTGGAGGTGCTGTTGTTCCCCCTTTCAGGGGAAGGGGAGATTTTTGTGACAGTCTTGTTTTTTTGCTACTTTATGGGGAATTTGGTTGGAGAGAAACAACAGAATTTTTAGAGGTGTGGAGAGGTCCCTCGAGTCCGTGTGGAATCTCATTAGGTTTAACATGTCCTTATGGGGGTCGGTTTTTGTTTTTAAGAGTTTTTGTAATTATCAGTTAGGCATTATTGTTTCGGAATGGAGCCCCTTCCCTTGTTGGGCTTTTTTTTTTCTTTTGTATGCCCTTGTATATCTTTTCTTTTCTCTCAATGAAAGTTTCTCGTCAAAAAAAAAAAAAAAAAGAAACAAAACAAAACAAAAAAAAAAAAAAGAGAGAATCTATTTGTTTCTTCTATTCACTTATACCTTACAGTTACGCCATATCTGCCTTCATAAATCCACCTGTCTCCTCCGGTAAATGAATTCTCAAAATCCATATGCCAGTCCAATGCCTATATTAGGTGGATCACGTTGCTGTTTTATAATCACATGATATATGATCTGTAGGAGATTTTTCCACTTGACAATTTAAATGGTTTAAGGGACATGACCTTTGGTGCTAACGGTAGGTGCTCAAATATTTAGTAAAGTACTCTTCTGGCTTGATTGCTCTTGTTATTTGAGAGTAGAATGTATTGCTCTTGTTATTTGAGAGTAGAATGTAGACCTTGGCTGGAGGTTTGTTCAACCAAATTGCCCTTTTTCTTTTTCTTTAAGAAAGATGTATCTGATTCATGATGTTTATTTCCTATATTCAAAACTTGTTATAAGTTTATAACACATTCGCTAACGAGAACCAGCAATAGGTATCATCCGATTAGATTAATGGAGCTCAACTTCTTGGCAGGGAGCAACTATAGTGGATCTTTCTGTCAACATCACTCTGTGTCCTGATTATGAGCTCCCTCCGGAAGCTACTGCACCACCCGCTGTAAGATTCCTGGGGGATTGTTTTTTGGTTAATAGACACTTTTGGGCCTTGTACTTTCAGCAATGATTTAGTCCATAAACATCCGTTATTTAGTCTTTGTACCTTAGCTTGTAACGATGTAACAATTTAGTTCTTGTACTTTCAAATTGGTAACAATTTAGTTTGAATTTTAATATGTAACAATTTAGTCCTTGTAATTTAAAGTTTTTAACGTTTTATCCCTATCGTGATAAACATTGTTAAGATTTGATAGAGTTTATTATAGGTGTAGGTCAAAAACTGACGAGGGACCAATTTTTTAAAATAAAGTACAAATATTAAATTGTTATATAATAAGAATTGCCACTTAATTTTGATAAGTTTTTTCACAATAGGGACTTAATTGTTATAAACTTTATACCACAGGAACTAAATTGTCATATATTAAAGTTAAAGGACTAAATTGTTAACCATTTGAAAGTAGAGAGACTAAATCCTTACAAAATGACTAAATCGTCATTTCGATGAAAGTATAGAGACCAAAAAACATTTTGTAACCTCCTTTTTTTTTGTTTCTCTTTCTTTTGTTGGCTGCTGTGTGTGTGTATATAGTCACTTGATATGTCTTCTCTTAGTTGACCAGCTTATTGTCTTGATTGTTGTAGGCCACAGGAACTACAGCACCTGGTGCTGCTGAATCCGCCTTCCAGAAAGCAGAGGATGTGGTTAGTGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGACGCACTGAACTCAGCAAAGGCATTTGATGAGAAACATCAGTTATCTTCCACGGCTTCAGCCAAAGTTGCTACATTCGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACTTTGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGTAAAAGTTAGCAATGCTGGTTCTGCCATCATGAATAACCGATTTGTAATGAGTGGGACTAGCTGGGTTGCCGATGCTTTCAATAAGGTAGCTAAGGCAGCCGGAGAAGTTGGTCAGAAAACAAAAGAGAAATTCGTGGCGTCCGAGGAAGAACAGAAAAAGAAGACAGTCGAAGATTTTGCTCAGGTCCATCTCTCGGAATCCCCTAAAGCAGCAACCGCGCCTCCTGAGCCTCAACAACGTCCCAAGCCAGAACCTGCTCAAGGTCTGATCCTCTGA

mRNA sequence

ATGCAGAGTGAAAGTGAACGGTCTCAAACTGCTTACGTAACCTTTAAAGATGCACAAGGAGCTGAAACTGCCGTCCTTCTATCTGGAGCAACTATAGTGGATCTTTCTGTCAACATCACTCTGTGTCCTGATTATGAGCTCCCTCCGGAAGCTACTGCACCACCCGCTGCCACAGGAACTACAGCACCTGGTGCTGCTGAATCCGCCTTCCAGAAAGCAGAGGATGTGGTTAGTGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGACGCACTGAACTCAGCAAAGGCATTTGATGAGAAACATCAGTTATCTTCCACGGCTTCAGCCAAAGTTGCTACATTCGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACTTTGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGTAAAAGTTAGCAATGCTGGTTCTGCCATCATGAATAACCGATTTGTAATGAGTGGGACTAGCTGGGTTGCCGATGCTTTCAATAAGGTAGCTAAGGCAGCCGGAGAAGTTGGTCAGAAAACAAAAGAGAAATTCGTGGCGTCCGAGGAAGAACAGAAAAAGAAGACAGTCGAAGATTTTGCTCAGGTCCATCTCTCGGAATCCCCTAAAGCAGCAACCGCGCCTCCTGAGCCTCAACAACGTCCCAAGCCAGAACCTGCTCAAGGTCTGATCCTCTGA

Coding sequence (CDS)

ATGCAGAGTGAAAGTGAACGGTCTCAAACTGCTTACGTAACCTTTAAAGATGCACAAGGAGCTGAAACTGCCGTCCTTCTATCTGGAGCAACTATAGTGGATCTTTCTGTCAACATCACTCTGTGTCCTGATTATGAGCTCCCTCCGGAAGCTACTGCACCACCCGCTGCCACAGGAACTACAGCACCTGGTGCTGCTGAATCCGCCTTCCAGAAAGCAGAGGATGTGGTTAGTGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGACGCACTGAACTCAGCAAAGGCATTTGATGAGAAACATCAGTTATCTTCCACGGCTTCAGCCAAAGTTGCTACATTCGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACTTTGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGTAAAAGTTAGCAATGCTGGTTCTGCCATCATGAATAACCGATTTGTAATGAGTGGGACTAGCTGGGTTGCCGATGCTTTCAATAAGGTAGCTAAGGCAGCCGGAGAAGTTGGTCAGAAAACAAAAGAGAAATTCGTGGCGTCCGAGGAAGAACAGAAAAAGAAGACAGTCGAAGATTTTGCTCAGGTCCATCTCTCGGAATCCCCTAAAGCAGCAACCGCGCCTCCTGAGCCTCAACAACGTCCCAAGCCAGAACCTGCTCAAGGTCTGATCCTCTGA

Protein sequence

MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL

Homology

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BLAST of Moc10g29010 vs. NCBI nr
Match: XP_022145369.1 (binding partner of ACD11 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-124
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 60
           MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT
Sbjct: 35  MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 94

Query: 61  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 120
           TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG
Sbjct: 95  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 154

Query: 121 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 180
           FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV
Sbjct: 155 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 214

Query: 181 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK 240
           ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK
Sbjct: 215 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK 274

Query: 241 PEPAQGLIL 250
           PEPAQGLIL
Sbjct: 275 PEPAQGLIL 283

[Close]

BLAST of Moc10g29010 vs. NCBI nr
Match: XP_022145370.1 (binding partner of ACD11 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 3   SESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTA 62
           SESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTA
Sbjct: 35  SESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTA 94

Query: 63  PGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFT 122
           PGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFT
Sbjct: 95  PGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFT 154

Query: 123 EKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVAD 182
           EKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVAD
Sbjct: 155 EKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVAD 214

Query: 183 AFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPE 242
           AFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPE
Sbjct: 215 AFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPE 274

Query: 243 PAQGLIL 250
           PAQGLIL
Sbjct: 275 PAQGLIL 281

[Close]

BLAST of Moc10g29010 vs. NCBI nr
Match: XP_038906358.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 424.9 bits (1091), Expect = 4.9e-115
Identity = 235/250 (94.00%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 1   MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 60
           MQSESERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT
Sbjct: 35  MQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGT 94

Query: 61  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 120
            APGAAESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVAT DKKIG
Sbjct: 95  KAPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIG 154

Query: 121 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 180
           FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSAIM NR+VMSGTSWV
Sbjct: 155 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV 214

Query: 181 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRP 240
           ADAFNKVAKAAGEVGQKTKEK V SEEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRP
Sbjct: 215 ADAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRP 274

Query: 241 KPEPAQGLIL 250
           KPEPAQGLIL
Sbjct: 275 KPEPAQGLIL 284

[Close]

BLAST of Moc10g29010 vs. NCBI nr
Match: XP_038906357.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 424.9 bits (1091), Expect = 4.9e-115
Identity = 235/250 (94.00%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 1   MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 60
           MQSESERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT
Sbjct: 35  MQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGT 94

Query: 61  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 120
            APGAAESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVAT DKKIG
Sbjct: 95  KAPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIG 154

Query: 121 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 180
           FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSAIM NR+VMSGTSWV
Sbjct: 155 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV 214

Query: 181 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRP 240
           ADAFNKVAKAAGEVGQKTKEK V SEEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRP
Sbjct: 215 ADAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRP 274

Query: 241 KPEPAQGLIL 250
           KPEPAQGLIL
Sbjct: 275 KPEPAQGLIL 284

[Close]

BLAST of Moc10g29010 vs. NCBI nr
Match: XP_011650336.1 (binding partner of ACD11 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 9.3e-114
Identity = 231/250 (92.40%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 1   MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 60
           MQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT
Sbjct: 35  MQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGT 94

Query: 61  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 120
             PGAAESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATFDKKIG
Sbjct: 95  KPPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIG 154

Query: 121 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 180
           FTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSAIM NR+VMSGTSWV
Sbjct: 155 FTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV 214

Query: 181 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRP 240
           AD FN+VAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRP
Sbjct: 215 ADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRP 274

Query: 241 KPEPAQGLIL 250
           KPEPAQGLIL
Sbjct: 275 KPEPAQGLIL 284

[Close]

BLAST of Moc10g29010 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.9e-57
Identity = 130/223 (58.30%), Postives = 165/223 (73.99%), Query Frame = 0


Query: 10  TAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAAES 69
           +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PPAA    T    AES
Sbjct: 43  SAYVTFKETQGAETAVLLSGASIADQSVIIELAPNY-------SPPAAPHAETQSSGAES 102

Query: 70  AFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAG 129
             QKAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+ D+KIG ++K++AG
Sbjct: 103 VVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAG 162

Query: 130 TLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVADAFNKVA 189
           T LV++K++ VDQ FQV+E+TKS +A AE  VS+AGSA+M NR+V++G SW A AFN+VA
Sbjct: 163 TSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 222

Query: 190 KAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK 228
           +AAGEVGQKTKEK  A +  Q    +++  E ++ +H SE  K
Sbjct: 223 QAAGEVGQKTKEKVEAEQPSQPAQSQQQLPEGYSPIHSSEYSK 258

[Close]

BLAST of Moc10g29010 vs. ExPASy TrEMBL
Match: A0A6J1CV14 (binding partner of ACD11 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014836 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.7e-125
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 60
           MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT
Sbjct: 35  MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 94

Query: 61  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 120
           TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG
Sbjct: 95  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 154

Query: 121 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 180
           FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV
Sbjct: 155 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 214

Query: 181 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK 240
           ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK
Sbjct: 215 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK 274

Query: 241 PEPAQGLIL 250
           PEPAQGLIL
Sbjct: 275 PEPAQGLIL 283

[Close]

BLAST of Moc10g29010 vs. ExPASy TrEMBL
Match: A0A6J1CUA3 (binding partner of ACD11 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014836 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.3e-124
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 3   SESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTA 62
           SESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTA
Sbjct: 35  SESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTA 94

Query: 63  PGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFT 122
           PGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFT
Sbjct: 95  PGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFT 154

Query: 123 EKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVAD 182
           EKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVAD
Sbjct: 155 EKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVAD 214

Query: 183 AFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPE 242
           AFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPE
Sbjct: 215 AFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPE 274

Query: 243 PAQGLIL 250
           PAQGLIL
Sbjct: 275 PAQGLIL 281

[Close]

BLAST of Moc10g29010 vs. ExPASy TrEMBL
Match: A0A0A0L545 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008890 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.5e-114
Identity = 231/250 (92.40%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 1   MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 60
           MQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT
Sbjct: 35  MQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGT 94

Query: 61  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 120
             PGAAESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATFDKKIG
Sbjct: 95  KPPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIG 154

Query: 121 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 180
           FTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSAIM NR+VMSGTSWV
Sbjct: 155 FTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV 214

Query: 181 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRP 240
           AD FN+VAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRP
Sbjct: 215 ADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRP 274

Query: 241 KPEPAQGLIL 250
           KPEPAQGLIL
Sbjct: 275 KPEPAQGLIL 284

[Close]

BLAST of Moc10g29010 vs. ExPASy TrEMBL
Match: A0A5A7UH68 (Binding partner of ACD11 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001410 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.0e-113
Identity = 231/250 (92.40%), Postives = 238/250 (95.20%), Query Frame = 0


Query: 1   MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 60
           MQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT
Sbjct: 126 MQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGT 185

Query: 61  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 120
             PGAAESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIG
Sbjct: 186 KPPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATLDKKIG 245

Query: 121 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 180
           FTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSAIM NR+VMSGTSWV
Sbjct: 246 FTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV 305

Query: 181 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRP 240
           AD FNKVAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRP
Sbjct: 306 ADTFNKVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRP 365

Query: 241 KPEPAQGLIL 250
           KPEPAQGLIL
Sbjct: 366 KPEPAQGLIL 375

[Close]

BLAST of Moc10g29010 vs. ExPASy TrEMBL
Match: A0A1S3BK74 (binding partner of ACD11 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490760 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.0e-113
Identity = 231/250 (92.40%), Postives = 238/250 (95.20%), Query Frame = 0


Query: 1   MQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGT 60
           MQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT
Sbjct: 35  MQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGT 94

Query: 61  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 120
             PGAAESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIG
Sbjct: 95  KPPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATLDKKIG 154

Query: 121 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 180
           FTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSAIM NR+VMSGTSWV
Sbjct: 155 FTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWV 214

Query: 181 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRP 240
           AD FNKVAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRP
Sbjct: 215 ADTFNKVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRP 274

Query: 241 KPEPAQGLIL 250
           KPEPAQGLIL
Sbjct: 275 KPEPAQGLIL 284

[Close]

BLAST of Moc10g29010 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-77
Identity = 161/240 (67.08%), Postives = 194/240 (80.83%), Query Frame = 0


Query: 2   QSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP-PAATGT 61
           QSE+ER++ AYVTFKD QGAETAVLLSGATIVD SV +++ PDY+L PEA A        
Sbjct: 36  QSETERTKLAYVTFKDLQGAETAVLLSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSN 95

Query: 62  TAPGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIG 121
            +P A +S  +KAEDVVS MLAKGFILGKDA+  AK+ DEKHQL+STASAKVA+FDKKIG
Sbjct: 96  KSPKAGDSVLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIG 155

Query: 122 FTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWV 181
           FT+KI+ GT++V +KVREVDQK+QVSEKTKSA A AE  VSNAGSAIM NR+V++G +WV
Sbjct: 156 FTDKINTGTVVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWV 215

Query: 182 ADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK 241
             AFNKVAKAA EVGQK KEK   +EEE K+K V++FA+VHLSESPKAA++  E ++  K
Sbjct: 216 TGAFNKVAKAAEEVGQKAKEKVGMAEEEDKRKVVDEFARVHLSESPKAASSTQEAERESK 275

[Close]

BLAST of Moc10g29010 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 265.0 bits (676), Expect = 6.1e-71
Identity = 150/246 (60.98%), Postives = 192/246 (78.05%), Query Frame = 0


Query: 2   QSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP----PAA 61
           QSE++ S+ AYVTFKD QGAETAVLL+G+TIVD SV +T+ PDY+LPP+A A       +
Sbjct: 36  QSENDGSKLAYVTFKDLQGAETAVLLTGSTIVDSSVTVTMSPDYQLPPDALASIESLKES 95

Query: 62  TGTTAPGAAE-SAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFD 121
             +++P   + S F+KAEDVVSGM++KGF+LGKDA+  AK+ DEKHQL+STASA+V +FD
Sbjct: 96  NKSSSPTREDVSVFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFD 155

Query: 122 KKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSG 181
           K+IGFTEKI+ GT +VS+KV+EVDQKFQV+EKTKSA A AE  VSNAGSAIM NR+V++G
Sbjct: 156 KRIGFTEKINTGTTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTG 215

Query: 182 TSWVADAFNKVAKAAGEVGQKTKEK--FVASEEEQKKKTVEDFAQVHLSESPKAATAPPE 241
            +WV  AFN+V+KAA EVGQK KEK      EEE+KKK V++ A VHL+ESPKA     +
Sbjct: 216 ATWVTGAFNRVSKAAEEVGQKAKEKVGLAEEEEEEKKKVVDEVAIVHLTESPKALDQSEQ 275

[Close]

BLAST of Moc10g29010 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 224.6 bits (571), Expect = 9.1e-59
Identity = 131/229 (57.21%), Postives = 167/229 (72.93%), Query Frame = 0


Query: 4   ESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTA 63
           +S    +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PPAA    T 
Sbjct: 38  QSSNEHSAYVTFKETQGAETAVLLSGASIADQSVIIELAPNY-------SPPAAPHAETQ 97

Query: 64  PGAAESAFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFT 123
              AES  QKAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+ D+KIG +
Sbjct: 98  SSGAESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLS 157

Query: 124 EKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVAD 183
           +K++AGT LV++K++ VDQ FQV+E+TKS +A AE  VS+AGSA+M NR+V++G SW A 
Sbjct: 158 QKLTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAG 217

Query: 184 AFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK 228
           AFN+VA+AAGEVGQKTKEK  A +  Q    +++  E ++ +H SE  K
Sbjct: 218 AFNRVAQAAGEVGQKTKEKVEAEQPSQPAQSQQQLPEGYSPIHSSEYSK 259

[Close]

BLAST of Moc10g29010 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-58
Identity = 130/223 (58.30%), Postives = 165/223 (73.99%), Query Frame = 0


Query: 10  TAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAAES 69
           +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PPAA    T    AES
Sbjct: 43  SAYVTFKETQGAETAVLLSGASIADQSVIIELAPNY-------SPPAAPHAETQSSGAES 102

Query: 70  AFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAG 129
             QKAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+ D+KIG ++K++AG
Sbjct: 103 VVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAG 162

Query: 130 TLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVADAFNKVA 189
           T LV++K++ VDQ FQV+E+TKS +A AE  VS+AGSA+M NR+V++G SW A AFN+VA
Sbjct: 163 TSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 222

Query: 190 KAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK 228
           +AAGEVGQKTKEK  A +  Q    +++  E ++ +H SE  K
Sbjct: 223 QAAGEVGQKTKEKVEAEQPSQPAQSQQQLPEGYSPIHSSEYSK 258

[Close]

BLAST of Moc10g29010 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 )

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-58
Identity = 130/223 (58.30%), Postives = 165/223 (73.99%), Query Frame = 0


Query: 10  TAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAAES 69
           +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PPAA    T    AES
Sbjct: 41  SAYVTFKETQGAETAVLLSGASIADQSVIIELAPNY-------SPPAAPHAETQSSGAES 100

Query: 70  AFQKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAG 129
             QKAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+ D+KIG ++K++AG
Sbjct: 101 VVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAG 160

Query: 130 TLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVADAFNKVA 189
           T LV++K++ VDQ FQV+E+TKS +A AE  VS+AGSA+M NR+V++G SW A AFN+VA
Sbjct: 161 TSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 220

Query: 190 KAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK 228
           +AAGEVGQKTKEK  A +  Q    +++  E ++ +H SE  K
Sbjct: 221 QAAGEVGQKTKEKVEAEQPSQPAQSQQQLPEGYSPIHSSEYSK 256

The following BLAST results are available for this feature:

BLAST of Moc10g29010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145369.1	1.2e-124	100.00	binding partner of ACD11 1-like isoform X1 [Momordica charantia]	[more]
XP_022145370.1	1.3e-123	100.00	binding partner of ACD11 1-like isoform X2 [Momordica charantia]	[more]
XP_038906358.1	4.9e-115	94.00	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_038906357.1	4.9e-115	94.00	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]
XP_011650336.1	9.3e-114	92.40	binding partner of ACD11 1 isoform X2 [Cucumis sativus]	[more]

BLAST of Moc10g29010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.9e-57	58.30	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of Moc10g29010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV14	5.7e-125	100.00	binding partner of ACD11 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1CUA3	6.3e-124	100.00	binding partner of ACD11 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0L545	4.5e-114	92.40	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008890 PE=4 SV...	[more]
A0A5A7UH68	1.0e-113	92.40	Binding partner of ACD11 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BK74	1.0e-113	92.40	binding partner of ACD11 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490760 PE...	[more]

BLAST of Moc10g29010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	1.5e-77	67.08	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	6.1e-71	60.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	9.1e-59	57.21	binding partner of acd11 1	[more]
AT5G16840.1	2.0e-58	58.30	binding partner of acd11 1	[more]
AT5G16840.3	2.0e-58	58.30	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..249
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..229
None	No IPR available	PANTHER	PTHR32343:SF37	BINDING PARTNER OF ACD11 1	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g29010.1	Moc10g29010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding