Moc10g28880 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g28880
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr10: 21732885 .. 21734392 (+)
RNA-Seq ExpressionMoc10g28880
SyntenyMoc10g28880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGTGAAGCAAAAAGCAATCAATCTCTTGGGTAATTTCTCCCCATCTCTAATATGTTTTAATCTCTTCATTTTATTTATTATTTATTTAAGTTTACTTTAATTACCACAATGTATTTTTAGATTAGATTATGATACGATATGAATCTTCGTACATAATTATGGATGTTAATTTAAACATAGCTCAAAAGATAAGGTACCTATTATCATCTTAAAAGTCGATATTCGATTCTTCGCCTTAACAAGTGTTCCTATTCATAAGAAACAACATTATTTGATTCTTGTTTCCATGTAATAATTAGTAACTAATATAGATATTGAGAAAAGAAAAACTTTTTTTCCAAACAAGAAGGGAGAGAGAAATTTCTAGGGGTTAAGAATGTTTTCCTTTAAATATTTCATGGTATTTGATTCCATGTCATTAAGTGTTTTTCAAAATGTTTTTATTAAAAGATTAAAACTTATTGGATAAAAAAAAATCAAGGTATTCCTTAAAATATTCTTAATATTTTTAAAATTAATAAAAAGAGGTCTAATAGTAAATTTGCCATGATTTAAATCAATATAGGCATACAAGTAGTGATTCTATATTATTTTATTTTTGAAATGATATATCCACAGTTACTTTTAAAATATATATATATTCTTTACGATGAGTGGGATAGAGATTCGAACTCATAACCAATTGATCTGTGAGAATTACTAATTATTGCTGAGTTAAGTTCATTTAAAATATATATATTTAAATTTTCCAAAAAATCAATTATATATATATATATATATATATTTTGTTCTTTTTGTTTCTATTTAGTGCGGCAGGAATTGGGAAGGCATATTGCAAATGTGGGGAAGGTTGGAAATGTGAGATCAAAATGACACAAGGCCCTGATGCTGGCAAGACCTTTGTTAATTGTGGCAACAACTGCATCTGTATAATGTAAGTCAAACCCGTCATTTCCTTAAATCATCAATAGACGACCTAAAAGTTTTAGTAAGTTAGAATAAATTTGAGCATATAAGCTTGAATCAACCTGACCTCAAGAAAGGAAGTTATATATATATTGCTTTTACCACTGAGTTAATGCTTTACATATGAGCTTTAAATTCACAATTTCTATCACTTTTGTCCAACAACTCAAATACATGTTTACATAAATTCAAAAATTTTAATCTCAAACTTCATAAATCCAGATTTACTACCACCATGAACCAAACGTCCCTTTAGTTTGATGAATTGAGATAAAGTTCAATCTCTTAAATGCATGATCAGTCGGATTACTTTAGATTTCGGGTTTTGGATTTAGGGTTTTCTCACACCATTGATTTTGAACAGAGAAGGGACAGCTGAAGGGGAAGTCAAGTTGCAGCAATTGGCAGAGGAGAGCAATTTGGAAGGGGCAACTTGTGAGTGTGGTGAAGGATGGAGCTGCACCATCTCCAAGATTGAAGCCACCAAGTCCTTTGCCAAGTGTGCTGGAGATTGTTCCTGCATCACTATTGCTTGA

mRNA sequence

ATGGAGAGTGAAGCAAAAAGCAATCAATCTCTTGGTGCGGCAGGAATTGGGAAGGCATATTGCAAATGTGGGGAAGGTTGGAAATGTGAGATCAAAATGACACAAGGCCCTGATGCTGGCAAGACCTTTGTTAATTGTGGCAACAACTGCATCTGTATAATAGAAGGGACAGCTGAAGGGGAAGTCAAGTTGCAGCAATTGGCAGAGGAGAGCAATTTGGAAGGGGCAACTTGTGAGTGTGGTGAAGGATGGAGCTGCACCATCTCCAAGATTGAAGCCACCAAGTCCTTTGCCAAGTGTGCTGGAGATTGTTCCTGCATCACTATTGCTTGA

Coding sequence (CDS)

ATGGAGAGTGAAGCAAAAAGCAATCAATCTCTTGGTGCGGCAGGAATTGGGAAGGCATATTGCAAATGTGGGGAAGGTTGGAAATGTGAGATCAAAATGACACAAGGCCCTGATGCTGGCAAGACCTTTGTTAATTGTGGCAACAACTGCATCTGTATAATAGAAGGGACAGCTGAAGGGGAAGTCAAGTTGCAGCAATTGGCAGAGGAGAGCAATTTGGAAGGGGCAACTTGTGAGTGTGGTGAAGGATGGAGCTGCACCATCTCCAAGATTGAAGCCACCAAGTCCTTTGCCAAGTGTGCTGGAGATTGTTCCTGCATCACTATTGCTTGA

Protein sequence

MESEAKSNQSLGAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKCAGDCSCITIA
Homology
[Close]
BLAST of Moc10g28880 vs. NCBI nr
Match: XP_022145399.1 (uncharacterized protein LOC111014857 [Momordica charantia])

HSP 1 Score: 234.2 bits (596), Expect = 5.4e-58
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MESEAKSNQSLGAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEG 60
           MESEAKSNQSLGAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEG
Sbjct: 1   MESEAKSNQSLGAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEG 60

Query: 61  EVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKCAGDCSCITIA 111
           EVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKCAGDCSCITIA
Sbjct: 61  EVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKCAGDCSCITIA 110

[Close]
BLAST of Moc10g28880 vs. NCBI nr
Match: XP_023540550.1 (uncharacterized protein LOC111800878 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.7 bits (491), Expect = 8.1e-46
Identity = 94/123 (76.42%), Postives = 100/123 (81.30%), Query Frame = 0 

Query: 1   MESEAKSNQSLGAAG----------IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNC 60
           MESEAK+ QSL + G          +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC
Sbjct: 1   MESEAKAIQSLSSVGSEVEVGAKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNC 60

Query: 61  ICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA---TKSFAKCAGDCSCI 111
           +CIIEGTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE    TKSFAKCAGDCSCI
Sbjct: 61  VCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCI 120

[Close]
BLAST of Moc10g28880 vs. NCBI nr
Match: XP_023540551.1 (uncharacterized protein LOC111800878 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45
Identity = 96/122 (78.69%), Postives = 101/122 (82.79%), Query Frame = 0 

Query: 1   MESEAKSNQSL--------GAAGI-GKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCI 60
           MESEAK+ QSL        GA G+ GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+
Sbjct: 1   MESEAKAIQSLSVGSEVEVGAKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCV 60

Query: 61  CIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA---TKSFAKCAGDCSCIT 111
           CIIEGTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE    TKSFAKCAGDCSCIT
Sbjct: 61  CIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCIT 120

[Close]
BLAST of Moc10g28880 vs. NCBI nr
Match: KAG6596727.1 (hypothetical protein SDJN03_09907, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45
Identity = 93/118 (78.81%), Postives = 98/118 (83.05%), Query Frame = 0 

Query: 1   MESEAKSNQSLGAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIE 60
           MESEAK+ QSL         +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIE
Sbjct: 1   MESEAKAIQSLSVGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIE 60

Query: 61  GTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA---TKSFAKCAGDCSCITIA 111
           GTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE    TKSFAKCAGDCSCIT+A
Sbjct: 61  GTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCITVA 118

[Close]
BLAST of Moc10g28880 vs. NCBI nr
Match: XP_022924877.1 (uncharacterized protein LOC111432244 [Cucurbita moschata])

HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45
Identity = 93/118 (78.81%), Postives = 98/118 (83.05%), Query Frame = 0 

Query: 1   MESEAKSNQSLGAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIE 60
           MESEAK+ QSL         +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIE
Sbjct: 1   MESEAKAVQSLSVGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIE 60

Query: 61  GTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA---TKSFAKCAGDCSCITIA 111
           GTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE    TKSFAKCAGDCSCIT+A
Sbjct: 61  GTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCITVA 118

[Close]
BLAST of Moc10g28880 vs. ExPASy TrEMBL
Match: A0A6J1CV46 (uncharacterized protein LOC111014857 OS=Momordica charantia OX=3673 GN=LOC111014857 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.6e-58
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MESEAKSNQSLGAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEG 60
           MESEAKSNQSLGAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEG
Sbjct: 1   MESEAKSNQSLGAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEG 60

Query: 61  EVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKCAGDCSCITIA 111
           EVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKCAGDCSCITIA
Sbjct: 61  EVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKCAGDCSCITIA 110

[Close]
BLAST of Moc10g28880 vs. ExPASy TrEMBL
Match: A0A6J1EA88 (uncharacterized protein LOC111432244 OS=Cucurbita moschata OX=3662 GN=LOC111432244 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.7e-46
Identity = 93/118 (78.81%), Postives = 98/118 (83.05%), Query Frame = 0 

Query: 1   MESEAKSNQSLGAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIE 60
           MESEAK+ QSL         +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIE
Sbjct: 1   MESEAKAVQSLSVGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIE 60

Query: 61  GTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA---TKSFAKCAGDCSCITIA 111
           GTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE    TKSFAKCAGDCSCIT+A
Sbjct: 61  GTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCITVA 118

[Close]
BLAST of Moc10g28880 vs. ExPASy TrEMBL
Match: A0A6J1KZQ8 (uncharacterized protein LOC111498543 OS=Cucurbita maxima OX=3661 GN=LOC111498543 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.3e-44
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 0 

Query: 1   MESEAKSNQSLGAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIE 60
           MESEAK  QSL         +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIE
Sbjct: 1   MESEAKVIQSLSVGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIE 60

Query: 61  GTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA---TKSFAKCAGDCSCITIA 111
           GTAEG VKLQQLA E   EGA+CECGEGWSC+ISKIE     K FAKCAGDCSCIT+A
Sbjct: 61  GTAEGAVKLQQLAGEGGFEGASCECGEGWSCSISKIEGPQDAKPFAKCAGDCSCITVA 118

[Close]
BLAST of Moc10g28880 vs. ExPASy TrEMBL
Match: A0A6J5X755 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS30938 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.2e-24
Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 0 

Query: 1   MESEAKSNQSL-------GAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICI 60
           ME+++   QS+       G + I KA+C+CGEGWKC I  T+GPDAGK F NCG+NC C+
Sbjct: 1   MEAQSSGEQSVRSVAAAGGNSSISKAFCRCGEGWKCVITRTEGPDAGKAFFNCGDNCTCV 60

Query: 61  I--EGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIE---ATKSFAKCAGDCSCIT 111
           I  +GT   +V  Q++ E+     A CECGEGW C ISK+E   A K F++C+  C+C+T
Sbjct: 61  IYADGTVTNDVVPQEV-EKVGASEAYCECGEGWKCVISKVEGPDAGKGFSECSNGCTCVT 120

[Close]
BLAST of Moc10g28880 vs. ExPASy TrEMBL
Match: A0A251P3A8 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G034700 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23
Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = 0 

Query: 1   MESEAKSNQSL-------GAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICI 60
           ME+++   QS+       G + I KA+C+CGEGWKC I  T+GPDAGK F NCG+NC C+
Sbjct: 1   METQSSGEQSVRSVAAAGGNSSISKAFCRCGEGWKCVITRTEGPDAGKAFFNCGDNCTCV 60

Query: 61  I--EGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIE---ATKSFAKCAGDCSCIT 111
           I  +GT   +V  Q++ ++     A CECGEGW C ISK+E   A K F++C+  C+C+T
Sbjct: 61  IYADGTVTNDVVPQEV-DKVGASEAYCECGEGWKCVISKVEGPDAGKGFSECSNGCTCVT 120

The following BLAST results are available for this feature:
BLAST of Moc10g28880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145399.15.4e-58100.00uncharacterized protein LOC111014857 [Momordica charantia][more]
XP_023540550.18.1e-4676.42uncharacterized protein LOC111800878 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023540551.11.1e-4578.69uncharacterized protein LOC111800878 isoform X2 [Cucurbita pepo subsp. pepo][more]
KAG6596727.11.4e-4578.81hypothetical protein SDJN03_09907, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022924877.11.4e-4578.81uncharacterized protein LOC111432244 [Cucurbita moschata][more]
BLAST of Moc10g28880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc10g28880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CV462.6e-58100.00uncharacterized protein LOC111014857 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1EA886.7e-4678.81uncharacterized protein LOC111432244 OS=Cucurbita moschata OX=3662 GN=LOC1114322... [more]
A0A6J1KZQ86.3e-4476.27uncharacterized protein LOC111498543 OS=Cucurbita maxima OX=3661 GN=LOC111498543... [more]
A0A6J5X7557.2e-2447.54Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS30938 PE=... [more]
A0A251P3A81.6e-2346.72Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G034700 PE=4 SV=1[more]
BLAST of Moc10g28880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g28880.1Moc10g28880.1mRNA