Moc10g28760 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCTGAACTGCCTCTCGTGCCAGCTGCTGCAGAGATCGGACTCGGAGAGAGAACAGAGATGTTACTCCGACGGCTTATCCTCGTCGGAGCGCAGCTGGTCCGGCAACCTCTCCCTCAGGCCGCCCTGCGAGGACCGCCCCGGTGTTCCGCTTCCGACGGCGGCCGCCAAGGGACACCGCCGCCTCCACACCACCGGCGCCGTCTCCTTCGGCAAGGAGCCCAGGCTCGTCAGAAGCTCCGGCATGAGGAGGGATTGGAGCTTCGAGGATCTTAGATCCATCGCTCAACAGCGAACCCAAAACCAACCCCAACCCTCCGCCAATTCCTGA ATGAGTCTGAACTGCCTCTCGTGCCAGCTGCTGCAGAGATCGGACTCGGAGAGAGAACAGAGATGTTACTCCGACGGCTTATCCTCGTCGGAGCGCAGCTGGTCCGGCAACCTCTCCCTCAGGCCGCCCTGCGAGGACCGCCCCGGTGTTCCGCTTCCGACGGCGGCCGCCAAGGGACACCGCCGCCTCCACACCACCGGCGCCGTCTCCTTCGGCAAGGAGCCCAGGCTCGTCAGAAGCTCCGGCATGAGGAGGGATTGGAGCTTCGAGGATCTTAGATCCATCGCTCAACAGCGAACCCAAAACCAACCCCAACCCTCCGCCAATTCCTGA ATGAGTCTGAACTGCCTCTCGTGCCAGCTGCTGCAGAGATCGGACTCGGAGAGAGAACAGAGATGTTACTCCGACGGCTTATCCTCGTCGGAGCGCAGCTGGTCCGGCAACCTCTCCCTCAGGCCGCCCTGCGAGGACCGCCCCGGTGTTCCGCTTCCGACGGCGGCCGCCAAGGGACACCGCCGCCTCCACACCACCGGCGCCGTCTCCTTCGGCAAGGAGCCCAGGCTCGTCAGAAGCTCCGGCATGAGGAGGGATTGGAGCTTCGAGGATCTTAGATCCATCGCTCAACAGCGAACCCAAAACCAACCCCAACCCTCCGCCAATTCCTGA MSLNCLSCQLLQRSDSEREQRCYSDGLSSSERSWSGNLSLRPPCEDRPGVPLPTAAAKGHRRLHTTGAVSFGKEPRLVRSSGMRRDWSFEDLRSIAQQRTQNQPQPSANS Homology
BLAST of Moc10g28760 vs. NCBI nr
Match: XP_023539506.1 (uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 112.8 bits (281), Expect = 1.8e-21 Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0
BLAST of Moc10g28760 vs. NCBI nr
Match: XP_022952265.1 (uncharacterized protein LOC111454968 [Cucurbita moschata] >KAG6596735.1 hypothetical protein SDJN03_09915, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028271.1 hypothetical protein SDJN02_09452, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.1 bits (279), Expect = 3.1e-21 Identity = 64/110 (58.18%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of Moc10g28760 vs. NCBI nr
Match: XP_023007608.1 (uncharacterized protein LOC111500186 [Cucurbita maxima]) HSP 1 Score: 111.3 bits (277), Expect = 5.3e-21 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 0
BLAST of Moc10g28760 vs. NCBI nr
Match: KAG6577703.1 (hypothetical protein SDJN03_25277, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015746.1 hypothetical protein SDJN02_23384, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.5 bits (275), Expect = 9.1e-21 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 0
BLAST of Moc10g28760 vs. NCBI nr
Match: XP_023553065.1 (uncharacterized protein LOC111810575 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 110.5 bits (275), Expect = 9.1e-21 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 0
BLAST of Moc10g28760 vs. ExPASy TrEMBL
Match: A0A6J1GL99 (uncharacterized protein LOC111454968 OS=Cucurbita moschata OX=3662 GN=LOC111454968 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.5e-21 Identity = 64/110 (58.18%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of Moc10g28760 vs. ExPASy TrEMBL
Match: A0A6J1L834 (uncharacterized protein LOC111500186 OS=Cucurbita maxima OX=3661 GN=LOC111500186 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.6e-21 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 0
BLAST of Moc10g28760 vs. ExPASy TrEMBL
Match: A0A0A0L198 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011635 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.7e-18 Identity = 70/125 (56.00%), Postives = 79/125 (63.20%), Query Frame = 0
BLAST of Moc10g28760 vs. ExPASy TrEMBL
Match: A0A5A7UAS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001620 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.0e-17 Identity = 71/121 (58.68%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of Moc10g28760 vs. ExPASy TrEMBL
Match: A0A1S3BJN6 (uncharacterized protein LOC103490783 OS=Cucumis melo OX=3656 GN=LOC103490783 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.0e-17 Identity = 71/121 (58.68%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of Moc10g28760 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14 Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of Moc10g28760 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 2.5e-08 Identity = 45/120 (37.50%), Postives = 59/120 (49.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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