Moc10g27370 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g27370
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr10: 20230145 .. 20231247 (+)
RNA-Seq ExpressionMoc10g27370
SyntenyMoc10g27370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGGTGCGCATTCTCTCTCAGTCTTCCGACTGAGTTTTTTTTTTTTTTTCCAGATGGTGTTCTTCTCTACTTTGTTCCATTCTTCTATGGGTATTTTCAGGAAGTAAGTAACATGGATCGAGATATAACAAGGACCTCTCTTGCGGTTGTGGAGGCAGTTTCTAGGGAGGAGAAGTCCACAAAAAAATGTAGTGGTAGGGTGTCGGGGTTCTCCCTGTTGGATGCCGATAGTGTTGTTGCGGCTAACAAAATCAAAGGCAGCATTATTATGTATGGTCCATGGCTTCGTCATCAGGACGTTTTAAAGAATTATAAAGCACAAAATTGGAGTGATTTCTTGGGATGGCATACTGGTTCAGAGAACTTCCATGGTCTAGGGGCAAGGATGACGGAGCAGAAGATGGGCAGCAGTGGAGGTGTGGGGCGATCGGCTCGAACACCGTTTTTTAATATGTGAAGGCTATCAATCTTAATTGTATTGAGATCTGTAACCAACATGATTTCGAAAATTTGTCTAATTCTTCTTTAACTGTCATGGTGGAAAATAAGGCAACTTTAGAGGCAAATATTTCCCTTTCAATCTTAAATAGGGGTGTCATAATTGACAAGATCCCTCTAAAGTTCGGAAAATCGTTGAAGTCGTTGTTGTATGGACTTGTCTGTCATTATTTTCTAAAAAAGAAAAAGAAAAAAAAAAGAAAATTGGAATGGTTGAAGTTAATGAGGGTATATTGGTCTTTCAACTTTTATTAAAAGAAAAAAAAAGAAAGAAAGAAAAGAATTAAAATGTTGAGATGACACGTGTGTGACATTATTTTCTGTCGCCATCCTCGGGAGGCCTTACCTCCACGGCTTACAAGTTGTCTCATCCACATTCCATTAGATGATGAAGTATCCCACAAAGAGTGGGTAGGAGCAATGAGAGGTGAACAAAAGGCATCTAGAGAGTGTTATGTAATCGAGCTCAAGGGTGCACGAACATGTGCAATGATAATCGGAGAGACCTCTACTGCAGACGAACAAGTCAAGGAAATCCCTCAAGATGAGTCATCAGAGAAGATTGAAGGTTGGGGTATTCTTGTGGAAGACCTTAAGTAG

mRNA sequence

ATGAAGGGGTGCGCATTCTCTCTCAGTCTTCCGACTGAGTTTTTTTTTTTTTTTCCAGATGGTGTTCTTCTCTACTTTGTTCCATTCTTCTATGGGTATTTTCAGGAAGTAAGTAACATGGATCGAGATATAACAAGGACCTCTCTTGCGGTTGTGGAGGCAGTTTCTAGGGAGGAGAAGTCCACAAAAAAATGTAGTGGTAGGGTGTCGGGGTTCTCCCTGTTGGATGCCGATAGTGTTGTTGCGGCTAACAAAATCAAAGGCAGCATTATTATGTATGGTCCATGGCTTCGTCATCAGGACGTTTTAAAGAATTATAAAGCACAAAATTGGAGTGATTTCTTGGGATGGCATACTGGTTCAGAGAACTTCCATGGTCTAGGGGCAAGGATGACGGAGCAGAAGATGGGCAGCAGTGGAGATGATGAAGTATCCCACAAAGAGTGGGTAGGAGCAATGAGAGGTGAACAAAAGGCATCTAGAGAGTGTTATGTAATCGAGCTCAAGGGTGCACGAACATGTGCAATGATAATCGGAGAGACCTCTACTGCAGACGAACAAGTCAAGGAAATCCCTCAAGATGAGTCATCAGAGAAGATTGAAGGTTGGGGTATTCTTGTGGAAGACCTTAAGTAG

Coding sequence (CDS)

ATGAAGGGGTGCGCATTCTCTCTCAGTCTTCCGACTGAGTTTTTTTTTTTTTTTCCAGATGGTGTTCTTCTCTACTTTGTTCCATTCTTCTATGGGTATTTTCAGGAAGTAAGTAACATGGATCGAGATATAACAAGGACCTCTCTTGCGGTTGTGGAGGCAGTTTCTAGGGAGGAGAAGTCCACAAAAAAATGTAGTGGTAGGGTGTCGGGGTTCTCCCTGTTGGATGCCGATAGTGTTGTTGCGGCTAACAAAATCAAAGGCAGCATTATTATGTATGGTCCATGGCTTCGTCATCAGGACGTTTTAAAGAATTATAAAGCACAAAATTGGAGTGATTTCTTGGGATGGCATACTGGTTCAGAGAACTTCCATGGTCTAGGGGCAAGGATGACGGAGCAGAAGATGGGCAGCAGTGGAGATGATGAAGTATCCCACAAAGAGTGGGTAGGAGCAATGAGAGGTGAACAAAAGGCATCTAGAGAGTGTTATGTAATCGAGCTCAAGGGTGCACGAACATGTGCAATGATAATCGGAGAGACCTCTACTGCAGACGAACAAGTCAAGGAAATCCCTCAAGATGAGTCATCAGAGAAGATTGAAGGTTGGGGTATTCTTGTGGAAGACCTTAAGTAG

Protein sequence

MKGCAFSLSLPTEFFFFFPDGVLLYFVPFFYGYFQEVSNMDRDITRTSLAVVEAVSREEKSTKKCSGRVSGFSLLDADSVVAANKIKGSIIMYGPWLRHQDVLKNYKAQNWSDFLGWHTGSENFHGLGARMTEQKMGSSGDDEVSHKEWVGAMRGEQKASRECYVIELKGARTCAMIIGETSTADEQVKEIPQDESSEKIEGWGILVEDLK
Homology
[Close]
BLAST of Moc10g27370 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-07
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0 

Query: 69  VSGFSLLDADSVVAANKIKGSIIMYGPWLRHQDVLKNYKAQNWSDFLGWHTGSENFHGLG 128
           +S  S LDA+S V  +KIK +I+MYGPW RH DVLK+Y AQNW+                
Sbjct: 7   MSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWT---------------- 61

Query: 129 ARMTEQKMGSSG 141
            RM EQK+G  G
Sbjct: 67  -RMMEQKVGDDG 61

[Close]
BLAST of Moc10g27370 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0 

Query: 69  VSGFSLLDADSVVAANKIKGSIIMYGPWLRHQDVLKNYKAQNWSDFLGWHTGSENFHGLG 128
           +S  S LDA+S V  +KIK +I+MYGPW RH DVLK+Y AQNW+                
Sbjct: 7   MSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWT---------------- 61

Query: 129 ARMTEQKMGSSG 141
            RM EQK+G  G
Sbjct: 67  -RMMEQKVGDDG 61

The following BLAST results are available for this feature:
BLAST of Moc10g27370 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.12.9e-0747.22uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of Moc10g27370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc10g27370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ21.4e-0747.22uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of Moc10g27370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g27370.1Moc10g27370.1mRNA