Moc10g27040 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g27040
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	axial regulator YABBY 5-like
Location	chr10: 19868451 .. 19873368 (+)
RNA-Seq Expression	Moc10g27040
Synteny	Moc10g27040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCAAACAGATGGAAATGATTTGACAATGGCCACTCGTGTAGCTAACGATATTCCAAGGCAACCCCCAACCATAAATAGACGTGAGAAAATTCATTCAATCAACTCTAATTTTTTATTTAGTTTTGTGCTCTTTTTTTCTTTTGGTCTAAAATTGGTTTGAATGATTTATTTTCTTTTCTTTTCTCTTTCCTTTCCATGTTCTATATATAATTAATTAGGAATTTCTTATGATGAACAAGCCTTTAAAAAAATCCCATTAATTTTCAAGATAAATTTGAGAAAGTGAAAAGAAAGAAGAAAATAACAATTTGGCCTTGGGTAAAGTTACTTTGGTAGGAGACTTCACTTTCAAATCTATCGTTATTAAGCTTTATAGTGACAAGATCAATACCATATGATCTTTTTTTTTTTTTTTTGAGGCGCATTGATATTTTGTTAATTAAAGCTCTATTTGATATTTATTTTGGTTTTTTTCTTTTAAATTAAACTTGCAAACACTACTTTCACCTATGTATTTCTTTGTTTGACATCTACTTTTTAAAAATATTTTCAAAATCTAAACTAAATTTTGAAAACTAAAAAAAAAATTCAGATTTTGTTTTGGTTTTTTAAATTTGGTTTAGAGTTCAAATGTGTCTTTTCTTAACAAGCATATATAATTTTTAAAAATACAAAACTTAAAATAATTATCAAAGACGGCCTAAAAGATTTATGAAAAGAGAGAGAGATTTAAGTTAAGCAAAAGAAATAATATTTTAAACCACTAATAAAGTATTATCCATAAAGTTGACAATAGGAAATATTAAACAATAAGTTTTGAACTCTTAATTAGATCTATATTGTTCTGTATCCATGTTACTAATTACTAAACTCTAAACTTAAACTTGTAGGATTGTATAACTTCTAATCTTTTTAATCTAATACCTACTACTTTTTTATTTGTGGATAAAGATGTTAATTTTGATGACAATAAATTATCAAAGGTAGGATTTTCTTTTAGTATTACAAATCCAAATTAGCTGGGGCCTTAAAAGAAATTTAATATCTTAACCAGTCGTGTTGGTTGAATCTTAATAAATAAACTTTGATATGACTTTTAAGCGGTGAAAATTTCATAATATGTGGTTGTATAAGTTCTTTCAAAAGGACGAGTTACTTAAATAAGTGGTTTTGAAAAAATACTTCCTTCAAAGAACTCAATTTTAAAAAACTAAACCAAACTCCTTTAAAACTTTGACACGATTTTGTTAGAGTAGTGTTTTTAGCACCAAGTACTTACTTAAATAATTTTAAAAAAATATATATATAAGACTTTAAATTGAAAAATAATTTTAATTACTTTTAAGACACTTTTAACTATAGACTCCTAATCAAAATCATATAAGACTTCAACAAAATATACGATGAAGATTCGAACTTCCGATCTTTTGATCGAAATATATGTTTGAACCAGTTGTATTGTCATGTTAAGGTTGGCAATGAATCGTCGGAGTCAAGATTTAACTACTTCGATGCTTTAAATATATTGAGAGTAAAATTAAATTAATACATGTGTATTGGGACAACATAAAAACAAAATGTAGTACTGATTTAAATTCTTTTGCCTTTTGTTGATGTATCATTAACTATTCTCTTGGTTCTATGTGGTTGAGTCTGCAGCCCTAGTTGCTTTTTCTCCTCTTAGGCTGCCCACCTACAAAACTTACAAAGTATAAAAGAGAGAGCAAAAAAAAAAGTCATAAAAAAATAATAATAATAAATTAGGGTTTGGTTTGAAAAACTTATTTGAATTATCTTGTAAAAGTTAAAAGGTTCTAATGCAACTTTAATTTAATTTTGGAATGAGTTTAAATCTTAGATACTTTGGTTTGTTAACTTTATATATTTATTCAATTTTTTCTAGTTCCTAAAGTTTGTGTGTAAAAATCTATCTTAGTTCTTGTCAGCAATTTATAATTATATATTTTATCTTAAACCTAAGAATAGAGACTTTTATTGGTCAAGTGTACCTGAACATAGCTTAAATTAATTAAGGTACTTATCTACGACTTAAAGATCGTGAGTTCGAATCTCCATCCTTAGATGTTGTATTAAAAAAAGTAATAAGTTAGGTGTTTTGGGTTTTTAACTGTAAAGACCTAAGATAATTTTTTAACAATCTTGGTCACTGTCATTATTATGTGGTTAATTACTGAACCATAGATGGATCACAGAGCTTCCATATATGTCTATTAACCCGGTAACATGAGCATGTGCTAACACCACACATATTGGCTGTAAGCTAGTCGAATTGAGCTCGACGAAAATTGATAACAAAATAACAACAATAACCAAAATGATTATTCTTCGAGAGAGTTCATATACTAAACGAGAACCAAAATGGAGAAAGAAAATTAAACTTTTAATGAGAGGAGAAAAAAAACCTTTGAAAAGTATTAGGGTTTATGATTAGTGTGTTGTTTGAAGTGAAAAACAATGTTTTTACACAGCTCCAGAAAAGAGACAGAGAGTACCCTCTGCTTACAACCGATTCATCAAGTGAGTGCTACTCATTTTCTTTCTTCTCTTTTTATTTCTCTTTCTCTCTCTATTTCTCTGGTTTCTAAATTTAAGAGAGAGAATAAGAACATATAATAAATATTTATATGTCTGTATGGTTCAGGGACGAGATCCAACGAATCAAGACTGTGAATCCAGACATCTCCCACAGAGAAGCTTTCAGTGCTGCTGCTAAGAATGTATGTATCTCTAGTTCTTTCTTTTTATTTTGGTTTAAATATTAGTTTGATTAGTATAGTTTTGACTTTGGTTCATTTTGATTTATGTAATTTCAAAAGTTTATTTTGGTCTCTATGCTCTCAAAAGATCAGTTAATTTGGTCTGTGTACTTTCAAAAATTGATCATTTTAATGATCTCTATTTGCAAAATTTTAACGCAAATTTTATGCATAATGGAAGTTCTTTGATACAAATTTATGGTTGTATTTCAATAAATTTAGTGAGGGAAGGTACAACTAAAATGGTCATACAGGGTACCAAAACAAACATTTCCAAAGTATAAAAACTAAAATGAACTACGAAAGTATAAAGAGATCAAAAAGGACGTTTAAATAGTATCTGAACGGTATTATTTTTCCCTCTTTTCCTGTGTCAAAATTATAATATAATTAGGGTTTTCTTTTTATCATGAATCTACTATGTTTTCTAATTTTATGAATTGATGTTTGTTTGTTTTGTTTTGATTTTATGGTGCAAGTGGGCCCACTTCCCTCATATTAACTTTGGTGTTCCTCCTCACCGCACTGCCAAGAAGACAAACATGCTTCACCAGGTCAAAACTCTCTCTCAACTCTCACCGTTTCTTTTTAATAAGATAATGAGTGAATTAAGAATTACGTGAGAAACATAAAAAATAACAATAAAAAATTTAAATGAAAGTATTTTAATTGAACAATATGGTAGAAATGCCGTAATTACATAAGGCAAAGGTTTTGGAGAGCCAAATTTGATGCTGCAACTTTGATATTCTCCCAAAGAAAGTCATGATTTTTTGAATTTAATGTAAGTTTTTTAACTTCAAATAGTGTTTATAAATAGATGTAATATTATGTCTAATAAATCTTTCAACTTCAAAAAGTGTATAATAAAATTTTCTGAACTTTCAATTTTGTGTGTCTAATATGTCTATAAGCTTTAAAAAAAAATCTAATATTTGAACGATTTATTAGACACAAAAATGAAATCAGTTCAATGACCTATTATATATAGAAAATTAAAAGTTTTGAGATTTATGAGACCATTTTTTAAGGTTTAGGGATCTATCGTTAATACACAACATTAGAAAGTTTAGAGATTTATTACAAGATTTTTAAAGTTGAAGTATCTATTAGACAAAGAGTCGAACTTTAATTAAAAAAATTAATGTATAGTAATTATGTGAAATTATTTGATATGCTTGACATAATGGAGAAATTATTTGAGGATCAAGTTACAACAACGTGGCTAACAATTGTTATGTTGTTAGAGGTATAGAGTGAAAATTAAAACTTATGTTTTAACCCTAGATCCAATGGTTACGAGGGAGACTGCAACATTGAATAATTTTTCAACATAACGATAAGTTTATATTGTCGTTTCGATGATGGATCTAACAATTACGAGAGTAGCACTCACAATGTGACAAGCCTTATATAATTAGTTTGATATGTTTTTTCAATACATAGTATGAGGGTAATTTAATTTTTTTGATTTTTGATTTTGATTTTTGATTTTTCAAAATCATGCTTATTTGCCTTATTTGCCTTGTGAAAAAATGGAAAAAACAAAAACTAATTAATAAAACATGTTCATAGTTCTTGTGAGCTTACTTTTAAGAAATGTAAAACCAAAAAAAAAGTTATCCCCAAATGTAGTCTTACTTTTTTTAGTTTAGGTTTAAACACATAATATTAGAATATGTGAGTTTTTTTTTTTTTTCAGTTTTCAGTAATTATTAGCTCCCCATTTGATTTTGTTGATTATAAATAGGTATTTATGAATGAGTTTGTCTTGTTAATTAGTCAAATAAAATTCACAATCATGATCCTTACTTATTAGAATATCCCTAGTAGAGGATTTCTTTTTGTTAATTTCTTTTAAATGAACGGTATTTTAGTTTAATATAAATAATGTTAGAAAATATAGGACCAAAGCAATTTAAGATATGGGTCTTGAATTTGAAGTTTGAATCTTGAGATGTCGTTTTTTTAATAGGTGCGTTTAACCAGTTGAGTTACACTCGACACCTTGAGATGTCATTATTTCTTTGTTGATACTAAATTTAATGTTTTGAATTTGTGTAGGAAGGAGATGATGTGACGTTGAAAGACGATCGGTTTTTGGGTTCAACTAACATGGGAGTTTCCCCTTGTTAA

mRNA sequence

ATGAACCAAACAGATGGAAATGATTTGACAATGGCCACTCGTGTAGCTAACGATATTCCAAGGCAACCCCCAACCATAAATAGACCTCCAGAAAAGAGACAGAGAGTACCCTCTGCTTACAACCGATTCATCAAGGACGAGATCCAACGAATCAAGACTGTGAATCCAGACATCTCCCACAGAGAAGCTTTCAGTGCTGCTGCTAAGAATTGGGCCCACTTCCCTCATATTAACTTTGGTGTTCCTCCTCACCGCACTGCCAAGAAGACAAACATGCTTCACCAGGAAGGAGATGATGTGACGTTGAAAGACGATCGGTTTTTGGGTTCAACTAACATGGGAGTTTCCCCTTGTTAA

Coding sequence (CDS)

ATGAACCAAACAGATGGAAATGATTTGACAATGGCCACTCGTGTAGCTAACGATATTCCAAGGCAACCCCCAACCATAAATAGACCTCCAGAAAAGAGACAGAGAGTACCCTCTGCTTACAACCGATTCATCAAGGACGAGATCCAACGAATCAAGACTGTGAATCCAGACATCTCCCACAGAGAAGCTTTCAGTGCTGCTGCTAAGAATTGGGCCCACTTCCCTCATATTAACTTTGGTGTTCCTCCTCACCGCACTGCCAAGAAGACAAACATGCTTCACCAGGAAGGAGATGATGTGACGTTGAAAGACGATCGGTTTTTGGGTTCAACTAACATGGGAGTTTCCCCTTGTTAA

Protein sequence

MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSPC

Homology

[Close]

BLAST of Moc10g27040 vs. NCBI nr
Match: XP_022153999.1 (axial regulator YABBY 5-like [Momordica charantia])

HSP 1 Score: 248.8 bits (634), Expect = 2.3e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH 60
           MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH
Sbjct: 107 MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH 166

Query: 61  REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSPC 119
           REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSPC
Sbjct: 167 REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSPC 224

[Close]

BLAST of Moc10g27040 vs. NCBI nr
Match: XP_042950842.1 (protein YABBY 4-like isoform X1 [Carya illinoinensis] >KAG2681461.1 hypothetical protein I3760_11G146200 [Carya illinoinensis] >KAG6636997.1 hypothetical protein CIPAW_11G150100 [Carya illinoinensis] >KAG6688906.1 hypothetical protein I3842_11G149000 [Carya illinoinensis] >KAG7956870.1 hypothetical protein I3843_11G146200 [Carya illinoinensis])

HSP 1 Score: 173.7 bits (439), Expect = 9.4e-40
Identity = 86/117 (73.50%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH 60
           +NQT+ +DLTM  R   D   +PP INRPPEKRQRVPSAYNRFIKDEIQRIK+VNPDISH
Sbjct: 95  INQTNSSDLTMPVRGGVDELPRPPAINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISH 154

Query: 61  REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 118
           REAFSAAAKNWAHFPHI+FG+ P +TAKKTNM  QEG+DV +KD  F  S N+GVSP
Sbjct: 155 REAFSAAAKNWAHFPHIHFGLMPDQTAKKTNMRQQEGEDVLIKDG-FFASANVGVSP 210

[Close]

BLAST of Moc10g27040 vs. NCBI nr
Match: XP_018848085.1 (protein YABBY 4-like isoform X1 [Juglans regia] >XP_040987974.1 protein YABBY 4-like isoform X1 [Juglans microcarpa x Juglans regia] >KAF5478452.1 hypothetical protein F2P56_005011 [Juglans regia])

HSP 1 Score: 170.6 bits (431), Expect = 7.9e-39
Identity = 84/117 (71.79%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH 60
           +NQT+ +D TM  R   D   +PP INRPPEKRQRVPSAYNRFIKDEIQRIK+VNPDISH
Sbjct: 95  INQTNSSDFTMPVRGGVDELPRPPAINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISH 154

Query: 61  REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 118
           REAFSAAAKNWAHFPHI+FG+ P +TAKKTN+  QEG+DV +KD  F  S N+GVSP
Sbjct: 155 REAFSAAAKNWAHFPHIHFGLMPDQTAKKTNVRQQEGEDVLIKDG-FFASANVGVSP 210

[Close]

BLAST of Moc10g27040 vs. NCBI nr
Match: XP_007039924.1 (PREDICTED: axial regulator YABBY 1 [Theobroma cacao] >EOY24425.1 Plant-specific transcription factor YABBY family protein [Theobroma cacao])

HSP 1 Score: 167.9 bits (424), Expect = 5.1e-38
Identity = 84/118 (71.19%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MNQTDGNDLTMATR-VANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDIS 60
           +NQT+ ND  + TR VA+++PR PP INRPPEKRQRVPSAYNRFIKDEIQRIK  NPDI+
Sbjct: 95  LNQTNTNDFALPTRGVADELPR-PPVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDIT 154

Query: 61  HREAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 118
           HREAFSAAAKNWAHFPHI+FG+ P +T KKTN+  QEG+DV +KD  F  S N+GVSP
Sbjct: 155 HREAFSAAAKNWAHFPHIHFGLMPDQTPKKTNVRQQEGEDVLIKDG-FFASANVGVSP 210

[Close]

BLAST of Moc10g27040 vs. NCBI nr
Match: XP_015963203.1 (protein YABBY 4 [Arachis duranensis] >XP_025627935.1 protein YABBY 4 [Arachis hypogaea] >XP_025702477.1 protein YABBY 4 [Arachis hypogaea] >QHO19886.1 Axial regulator YABBY [Arachis hypogaea] >QHO49556.1 Axial regulator YABBY [Arachis hypogaea] >RYR29458.1 hypothetical protein Ahy_B01g053842 [Arachis hypogaea] >RYR78020.1 hypothetical protein Ahy_A01g002750 [Arachis hypogaea])

HSP 1 Score: 167.9 bits (424), Expect = 5.1e-38
Identity = 84/119 (70.59%), Postives = 100/119 (84.03%), Query Frame = 0


Query: 1   MNQTD-GNDLTMATR-VANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDI 60
           MNQT+  N+ +M TR V +++PR PP INRPPEKRQRVPSAYNRFIKDEIQRIK+VNPDI
Sbjct: 102 MNQTNTPNEFSMPTRTVVDELPR-PPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDI 161

Query: 61  SHREAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 118
           +HREAFSAAAKNWAHFPHI+FG+ P +T KKTN+  QEG++V +KD  F  S N+GVSP
Sbjct: 162 THREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVRQQEGEEVLMKDAGFYASANVGVSP 219

[Close]

BLAST of Moc10g27040 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.4e-32
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 17  NDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSAAAKNWAHFPH 76
           ++IP+ PP +NRPPEKRQRVPSAYNRFIK+EIQRIK  NPDISHREAFSAAAKNWAHFPH
Sbjct: 126 HEIPKAPP-VNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPH 185

Query: 77  INFG-VPPHRTAKKTNMLHQEGDDVTLKDDRFL--GSTNMGVSP 118
           I+FG VP ++  KKTNM  QEG+D  +  + F    + N+GV+P
Sbjct: 186 IHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFYAPAAANVGVTP 228

[Close]

BLAST of Moc10g27040 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 71/115 (61.74%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 9   LTMATRVANDIPR-----QPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREA 68
           L MATR    +       +PP  NRPPEKRQRVPSAYNRFIK+EIQRIK  NPDISHREA
Sbjct: 124 LVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREA 183

Query: 69  FSAAAKNWAHFPHINFG-VPPHRTAKKTNMLHQEGDDVTLKDDRFLGS-TNMGVS 117
           FSAAAKNWAHFPHI+FG +  H   KK N+  QEG+D  +  + F GS  N+GV+
Sbjct: 184 FSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFYGSAANVGVA 238

[Close]

BLAST of Moc10g27040 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-29
Identity = 66/108 (61.11%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 18  DIPRQ-PPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSAAAKNWAHFPH 77
           ++P+  P + NRPPEKRQRVPSAYNRFIKDEIQRIK  NPDISHREAFSAAAKNWAHFPH
Sbjct: 148 ELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPH 207

Query: 78  INFGVPPHRTAKKTNMLHQEGDDVTLKDDRF-------LGSTNMGVSP 118
           I+FG+ P +  KKT       +D+ LKD  +         + NMGV+P
Sbjct: 208 IHFGLMPDQGFKKTFKPQDGSEDILLKDSLYAAAAAAAAAAANMGVTP 255

[Close]

BLAST of Moc10g27040 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-29
Identity = 66/108 (61.11%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 18  DIPRQ-PPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSAAAKNWAHFPH 77
           ++P+  P + NRPPEKRQRVPSAYNRFIKDEIQRIK  NPDISHREAFSAAAKNWAHFPH
Sbjct: 148 ELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPH 207

Query: 78  INFGVPPHRTAKKTNMLHQEGDDVTLKDDRF-------LGSTNMGVSP 118
           I+FG+ P +  KKT       +D+ LKD  +         + NMGV+P
Sbjct: 208 IHFGLMPDQGFKKTFKPQDGSEDILLKDSLYAAAAAAAAAAANMGVTP 255

[Close]

BLAST of Moc10g27040 vs. ExPASy Swiss-Prot
Match: Q8L556 (Protein YABBY 3 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB3 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-28
Identity = 67/101 (66.34%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 26  INRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSAAAKNWAHFPHINFG-VPPH 85
           INRPPEKRQRVPSAYNRFIKDEIQRIK  NPDISHREAFSAAAKNWAHFPHI+FG +P H
Sbjct: 212 INRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDH 271

Query: 86  RTAKKTNMLHQEGD--DVTLKDDRF------LGSTNMGVSP 118
           +  KKT++L Q+    D  LK+  +        + NMGV+P
Sbjct: 272 QGLKKTSLLPQDHQRKDGLLKEGLYAAAAAAAAAANMGVAP 312

[Close]

BLAST of Moc10g27040 vs. ExPASy TrEMBL
Match: A0A6J1DKR6 (axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111021366 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH 60
           MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH
Sbjct: 107 MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH 166

Query: 61  REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSPC 119
           REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSPC
Sbjct: 167 REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSPC 224

[Close]

BLAST of Moc10g27040 vs. ExPASy TrEMBL
Match: A0A2I4GW09 (protein YABBY 4-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109011373 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.8e-39
Identity = 84/117 (71.79%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MNQTDGNDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISH 60
           +NQT+ +D TM  R   D   +PP INRPPEKRQRVPSAYNRFIKDEIQRIK+VNPDISH
Sbjct: 95  INQTNSSDFTMPVRGGVDELPRPPAINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISH 154

Query: 61  REAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 118
           REAFSAAAKNWAHFPHI+FG+ P +TAKKTN+  QEG+DV +KD  F  S N+GVSP
Sbjct: 155 REAFSAAAKNWAHFPHIHFGLMPDQTAKKTNVRQQEGEDVLIKDG-FFASANVGVSP 210

[Close]

BLAST of Moc10g27040 vs. ExPASy TrEMBL
Match: A0A445ERB0 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g002750 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.5e-38
Identity = 84/119 (70.59%), Postives = 100/119 (84.03%), Query Frame = 0


Query: 1   MNQTD-GNDLTMATR-VANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDI 60
           MNQT+  N+ +M TR V +++PR PP INRPPEKRQRVPSAYNRFIKDEIQRIK+VNPDI
Sbjct: 102 MNQTNTPNEFSMPTRTVVDELPR-PPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDI 161

Query: 61  SHREAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 118
           +HREAFSAAAKNWAHFPHI+FG+ P +T KKTN+  QEG++V +KD  F  S N+GVSP
Sbjct: 162 THREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVRQQEGEEVLMKDAGFYASANVGVSP 219

[Close]

BLAST of Moc10g27040 vs. ExPASy TrEMBL
Match: A0A061G3I5 (Plant-specific transcription factor YABBY family protein OS=Theobroma cacao OX=3641 GN=TCM_016030 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.5e-38
Identity = 84/118 (71.19%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MNQTDGNDLTMATR-VANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDIS 60
           +NQT+ ND  + TR VA+++PR PP INRPPEKRQRVPSAYNRFIKDEIQRIK  NPDI+
Sbjct: 95  LNQTNTNDFALPTRGVADELPR-PPVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDIT 154

Query: 61  HREAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 118
           HREAFSAAAKNWAHFPHI+FG+ P +T KKTN+  QEG+DV +KD  F  S N+GVSP
Sbjct: 155 HREAFSAAAKNWAHFPHIHFGLMPDQTPKKTNVRQQEGEDVLIKDG-FFASANVGVSP 210

[Close]

BLAST of Moc10g27040 vs. ExPASy TrEMBL
Match: A0A6P9ES50 (protein YABBY 4-like OS=Juglans regia OX=51240 GN=LOC109018539 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.5e-38
Identity = 84/120 (70.00%), Postives = 99/120 (82.50%), Query Frame = 0


Query: 1   MNQTDGNDLTMATR--VANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDI 60
           +NQT+ +D TM  R  V +++PR PPTIN+PPEKRQRVPSAYNRFIKDEIQRIK+VNP+I
Sbjct: 96  INQTNASDFTMPARGGVVDELPR-PPTINKPPEKRQRVPSAYNRFIKDEIQRIKSVNPEI 155

Query: 61  SHREAFSAAAKNWAHFPHINFGVPPHRTAKKTNMLHQEGD-DVTLKDDRFLGSTNMGVSP 118
           SHREAFSAAAKNWAHFPHI+FG+ P +T +KTNM  QE D DV +KD   L S N+GVSP
Sbjct: 156 SHREAFSAAAKNWAHFPHIHFGLMPEQTMRKTNMRQQEADQDVLIKDHGLLASANVGVSP 214

[Close]

BLAST of Moc10g27040 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 139.0 bits (349), Expect = 2.4e-33
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 17  NDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSAAAKNWAHFPH 76
           ++IP+ PP +NRPPEKRQRVPSAYNRFIK+EIQRIK  NPDISHREAFSAAAKNWAHFPH
Sbjct: 126 HEIPKAPP-VNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPH 185

Query: 77  INFG-VPPHRTAKKTNMLHQEGDDVTLKDDRFL--GSTNMGVSP 118
           I+FG VP ++  KKTNM  QEG+D  +  + F    + N+GV+P
Sbjct: 186 IHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFYAPAAANVGVTP 228

[Close]

BLAST of Moc10g27040 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 134.0 bits (336), Expect = 7.7e-32
Identity = 71/115 (61.74%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 9   LTMATRVANDIPR-----QPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREA 68
           L MATR    +       +PP  NRPPEKRQRVPSAYNRFIK+EIQRIK  NPDISHREA
Sbjct: 124 LVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREA 183

Query: 69  FSAAAKNWAHFPHINFG-VPPHRTAKKTNMLHQEGDDVTLKDDRFLGS-TNMGVS 117
           FSAAAKNWAHFPHI+FG +  H   KK N+  QEG+D  +  + F GS  N+GV+
Sbjct: 184 FSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFYGSAANVGVA 238

[Close]

BLAST of Moc10g27040 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 134.0 bits (336), Expect = 7.7e-32
Identity = 71/115 (61.74%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 9   LTMATRVANDIPR-----QPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREA 68
           L MATR    +       +PP  NRPPEKRQRVPSAYNRFIK+EIQRIK  NPDISHREA
Sbjct: 93  LVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREA 152

Query: 69  FSAAAKNWAHFPHINFG-VPPHRTAKKTNMLHQEGDDVTLKDDRFLGS-TNMGVS 117
           FSAAAKNWAHFPHI+FG +  H   KK N+  QEG+D  +  + F GS  N+GV+
Sbjct: 153 FSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFYGSAANVGVA 207

[Close]

BLAST of Moc10g27040 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-24
Identity = 51/71 (71.83%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 11  MATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSAAAKN 70
           ++  +  + PR PP   RPPEKRQRVPSAYNRFIK+EIQRIK  NP+ISHREAFS AAKN
Sbjct: 92  LSENIDREAPRMPPI--RPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKN 151

Query: 71  WAHFPHINFGV 82
           WAHFPHI+FG+
Sbjct: 152 WAHFPHIHFGL 160

[Close]

BLAST of Moc10g27040 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23
Identity = 49/69 (71.01%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 13  TRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSAAAKNWA 72
           +R++     +   +NRPPEKRQRVPSAYN+FIK+EIQRIK  NPDISHREAFS AAKNWA
Sbjct: 85  SRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 144

Query: 73  HFPHINFGV 82
           HFPHI+FG+
Sbjct: 145 HFPHIHFGL 153

The following BLAST results are available for this feature:

BLAST of Moc10g27040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153999.1	2.3e-62	100.00	axial regulator YABBY 5-like [Momordica charantia]	[more]
XP_042950842.1	9.4e-40	73.50	protein YABBY 4-like isoform X1 [Carya illinoinensis] >KAG2681461.1 hypothetical...	[more]
XP_018848085.1	7.9e-39	71.79	protein YABBY 4-like isoform X1 [Juglans regia] >XP_040987974.1 protein YABBY 4-...	[more]
XP_007039924.1	5.1e-38	71.19	PREDICTED: axial regulator YABBY 1 [Theobroma cacao] >EOY24425.1 Plant-specific ...	[more]
XP_015963203.1	5.1e-38	70.59	protein YABBY 4 [Arachis duranensis] >XP_025627935.1 protein YABBY 4 [Arachis hy...	[more]

BLAST of Moc10g27040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22152	3.4e-32	67.31	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q9XFB1	1.1e-30	61.74	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
A2X7Q3	1.6e-29	61.11	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	1.6e-29	61.11	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
Q8L556	1.3e-28	66.34	Protein YABBY 3 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB3 PE=2 SV=1	[more]

BLAST of Moc10g27040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKR6	1.1e-62	100.00	axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111021366 PE=3...	[more]
A0A2I4GW09	3.8e-39	71.79	protein YABBY 4-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109011373 PE=3 S...	[more]
A0A445ERB0	2.5e-38	70.59	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g002750 PE=3 SV=1	[more]
A0A061G3I5	2.5e-38	71.19	Plant-specific transcription factor YABBY family protein OS=Theobroma cacao OX=3...	[more]
A0A6P9ES50	2.5e-38	70.00	protein YABBY 4-like OS=Juglans regia OX=51240 GN=LOC109018539 PE=3 SV=1	[more]

BLAST of Moc10g27040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45190.1	2.4e-33	67.31	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	7.7e-32	61.74	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.2	7.7e-32	61.74	Plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	2.0e-24	71.83	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.7e-23	71.01	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 11..80 e-value: 2.3E-38 score: 132.4
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 13..116
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 21..76 e-value: 3.1E-6 score: 29.4
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 21..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR31675:SF4	AXIAL REGULATOR YABBY 3	coord: 13..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g27040.1	Moc10g27040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0010154	fruit development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:2000024	regulation of leaf development
biological_process	GO:1902183	regulation of shoot apical meristem development
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus