Moc10g24770 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g24770
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Locationchr10: 17831291 .. 17837989 (+)
RNA-Seq ExpressionMoc10g24770
SyntenyMoc10g24770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGAAAGGGAGGCAAACGTTGCCATCGAGGTTCGTCCTCTAGAACCAAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAAAAGAAGGCTACTAGTAAGGGGTTTAAACCTGAGTCTGCTGTTGCTGCTGCCAAGAAAGGCAAGACCAAAACTGCAGACAAAGGAAAATGTTTCCATTGCAATGTAGATGGGTATTGGAAGTTGAATTGCCCGAAATACCTGGCCGAGAGGAAGAAACCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATATTTAGTGGAGAATGATGACTCCGCCTGGATATTAGATTCAAGAACCACTAATCACGTTTGTTTTTCGTTTTAGGGAATTAGTTCCTGGAGGCAACTTCAAGCCGGAGAGATGACTCTCAAGTTTGGAATGGGAGAGGTTGTCTCAGCTGTGGCGGTAAGGGAGCTCAAATTGTTTACGAACAAGAATTTGTATATATTATTAGATAATGTGTACGTAGTTCCAAAAATCAAAAGGAACTTAATTTCAATTTCTTGTTTGTTAAAACATTTGTATTTCATTTCCTTTAAATTAAATGAAGCATTCATGTCTAGAAATTGTGTAAATATTTGTTCTGCTAAGCTTGAAAACAACTTGTATGTGCTAAGACCAACCATAACTAAAGCAGTTTTAAATATCGAGTTGTTTAAAAATGCTAAAAATCAAAATAAAAGGCAAAAAGTTTCTCCTAAGGAAAATACCTATCTTTGGAAGTTAAGATTAGGTCACATTAGTCTCAATAGGATTGGGAGATTGGTTAAGAATGGTCTTCTAAGCGAGTTAGAAGACAACTCTTTACCACCTTGTCAGTCTTGTCTTGAAGGCAAGATGACTAGAAGGCCTTTTTACTGGAAATGGTTATAGAGCCAAAGAGCCCTTAGAACTTATACATTCAGACCTTTGTGGTCCGATGAATGTTAAAGCTCGATGAGGGTATGAATACTTCATCTATTTTATAGATGATTATTCAAGGTATGGTTATTTATACCTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAGTACAAGACCGAAGTTGAAAATCAATTAGGTAAAACCATTAAAACACTTCGATCTGATCGGGGTGGAGAGTATATGGACTTGCGATTCCAGGACTATATGATAGAACATGAAATCACATTCCAACTCTCAGCCCTTGGTACACCTCAACAAAACAGTGTATCAGAAAGGAGAACAGAACCCTGTTGGACATGGTTCGATCAATGATGAGCTATGCTCAGTTGCCTAACTTGTTTTGGGGTTATGGAGTGGAGACTGCAGTTTATATTTTGAACGTAGTTTCATCTAAGAGTGTGTCTGAAACACCCTTTGGACTATGGAAGGGACGTAAAGCTAGTTTACGTCACTTCCATATTTTGGGATGTCCAGCACACGTGCTCGTAACTAACCCAAAGAAATTACGACCTCGTTCAAAAGTATGCCTATTGATAACTCTCAAAAAGAGAGTTATTTGTTCAAGAATTTCATATAAATTAGCTCAGGGTAGCCACATTAACACCCATTCTACACTGATTTTGTGTAAATAATTTTTTACATTCATTAACATCTTTACCTTATTAGACAATGCTGACAGTTATGAAGAATGACCTAATTTTGAATGTTTTGATGCAGCATTGTTGATGATGTAGCATCAGAATCAAAAATGCAGAAAAAACAGAGTTGACCGTGACAGATTTTTACCCGAAAATTTAGTGCAGTAAAACCCAGATTCGTCATTAAATTGGGCTAGGCCCCATTTTATTCATTTTGGTTACCCTAAAATTGAGAAGGGGTATAAATGCTTTCATTTCAAGGTTGCCTCCATGGATTCTAATTCTTCATAAAACCTTAGAGAGAACAAGACAAGAGAAGAGGGAAGACACTTGGAGAGGAACCCGAAGAAGACAACAAAGGAAGTGAAGGGCTGTTGTTTTCCCTCATTTTCTTCTTCTTTTATACTCTTTAGTGCATGAGTTTTGTATTTTCCTTCCCTTTTCTTGTATGACATTGTGTAGCTAAGTTTATTTGTAAGGGGGAGGATGTTGTGAACTTGTTCTTGGGCTGTAAACTTTGGTTTGACTTAATGATGATATACATATTGAGTTGAAGTTGTTTTTAATGTTTTATTTTCAATGTGCTTGGCCAACATATTGGAATATCTTCTTATTAACTCTTGGAAAATTGTAATAGGAAGTGTTTGGCTTCAACTCGTGGTGGATCTACTTGAGTTTAGAGTGTGGGTACTTAGGAATAAGGCTCACCTAGTAAGGTTATAAACTGAGTATATATGCTGTCAAGTTTGTCTAAAAACATGAATATCAGAAAATTTGGAAATCTGGGAAGATTTCGTATTTGTTTGGCCAGTATATCAACATCGTTAATGTTGTAGCATTGTTAGAGTAGCCCAGAAAGAGTCACGAATCATCTTCCCCGTTGCCCTTGTTACATCAGTAGTTAATCTCTTATTTGCACACTTTCCTTTAATCGATTTGGTTTTGCTTTGTTCTTGTTTTTATTCAGCAAGTCATTTTTGCACTATTTTGTTTGAATCCCTTTAGTTTTTCTTGTTCAAAACATATTTTGTTAATTTGTTTGTTTTCTTAAGTAATTGTTGAAGTGTTTAGTAATCAATCCCTATGGATACGATCTTTTTATCATTTGCTACAACGGTTGTGTACACTTGCACAAAGGGTTCTAAACCATACCAACACCTATTTGTAGCTTACCCTAAAGAGATGAGAGATGGTCTCTTCTTCGATCCTCAAGACAACAGAGTGTTTGTATCGACAAACGCCACCTTCTTGGAAGAAGACCACGTTCGAGATCATAAACCACGAAGTAAGGTAATGATAAATGAGATTTCCGAAGAGGCTAAAAATACGTCAACAAGAGTTGTTGATCAAGCTGGCACTTCGACAAGAGTTGTTGATGAAGGCAGCACGTCACGTCAGTGACATCCACCTCAAGAATTGAGGCTACCTCGACGTAGTGGGAGGATTGTGTCACAACCTGACCGCTATTGTGAAACCCAAGATGTCATACGTGATGACGGCGTCAAGGATCCATTGACCTACAAATAGGCAATGAAAGATTTGGACAATGACGAATGGGTCAAAGCCATGGACCTAGAAATGGAGTCTATGTACTTCAATTCTGTTTGGGAACTTGTAGACCAACCTGACGGGGTAAGACCCATAGGGTGCAAATGGATCTACAAGAGAAAACGAGACGCCAAAGGAAAGGTACAGACCTACAAGGCGAGGCTTGTGGTGAAAGCCTACACACAAAGGGAAGAGGTGGACTATGAAGAAAACTTCTCCTTGGTAGCTATGTTCAAACCCTCCTCTCTCTTCAAACACCTACTTTCTTTTTCTTTTTTATTTTTACTTTTATTTTTCTTTCTTTTCTTTCTCTCTCTACAGTTCATCTTCGTCCCGATCTCTTCTTCCTCCATCTTTCTCTTTTCAAACATCCACTTTCTCCTTGCCTTTTTCTTTTTATTTTTCTTTTGTGTCTCTTTTCTCTCTCTCTCTACCATTCATCTTCTTCTTCCCTCTTTCCCACTCTCAAAGCTCTCTCCCAAACTCACTCACTATACTCATACGTCCGACAACCTCCATGAACGGTGGCCACAACAGCAACCTCCGAAGATCCGACTCCCACCAGTACAGCAACTTCTGATTGACGCGGACGACACAACACTCCAGCGATGGCATTATAGATTTCGACCAGCGACATTTCAAGTACGTGGCAGCAACATTACGACAACATTCTGACACAACCAGCTCTGGGGAAATTCAGATTTGCGATGGCAGACACCGACGTTAATGACGGTTCCTCCAGCAATGTGAATGGAGATTCCTCTAACAACCCATGCCTCTAGTTACTTTTATTGTTTTGGTGTGTTAGGAAAGAAAAAGGAAAGTTTTTTTTTATTCTCATTAAAAAAAATGAAAAGATTTTACTTTATATTAAACATAAAATAAGTGAAAGTTTTCAAAATGTAGGTAAATAAAAGATGTTTTAAAAGGAAATATTTTATTTTAAGTTTTAAATATTGTTTGAGATTTAAATAAAATAAAAAAAATTTTTTTAATGAAAGATTTCTAAATAAATTTCTTTAAAGAAAATAAAAGTAAAAGATTTTTTAAAATAAATATTGTTTTAAATTTCAAAGTGGTAAAAGTTGAATTTTAAAATAAAAGCTTTTTTAAAACTTCCCTTTTTAAAGTTTCTTTTTCAATAAAAATTTTGTTTTGATTTTAAGTCTTAAAAGTAAAGTTTTTAAAAAAGAAAATAAGATTTTGATTTAAAATAAAGAAAATTAATTCTTTTTAAATAAATTTTATTTTAAGTTAAAATGAATGGCAAATTACAAATGAAGTAAAAGCTTGTTTTGAAAATAAAAGACTTGTTAAATAAGTTTTAAAAAAGTGAAGAGATTTTTTAAATAAGTTTATGATTTTTTTTTAAATGAATTTCAAACTCCAAACAAATCAAAAGTTTTATTTGTTTTTTTGTTTAGAGTTTTAGTTTTTAACAAAGCTTGAAAATAAAAGGTTTGTATTTAAAAAAAGGAAATTTTACAAATTTAGGTGTTGGCATGGTAGCAATAGGCTTGGTCGTCGAAATCCATATTCCAAGTTCAAGCTCTTATATGCCATTTTTTTATTACTCTTTTATCGTTGTTTTTTTTTTTAAGAATTATTTCCAAAACTGCAATGACTCAAGTTGGAACCTTCCAATATTTTCGAGGTTGTTATTTTTTTCCAGATGGTCTTTGCGCTACTCATTCTTGTTGGTTCATATTTTATCGTAAAATGTGAACTAATAAATATGGGAGATTCAAATAAAAACAGAAAAATATTCTTTTGAACCAAATAATATAATAGGATAATTTATGATAAAATATGGTACCATTTGCGAACGGGTGTTGTAGGGTGCTAACACCTTCCCTACGCTCAGTCGACTCTCGAACGAATAACATGCTTTTCGCAGACCTTTTTTCTTTCAAATAGGTGACCAATCCGACCTTATAGATGGTTGGTGGCGACCCCAAACCCTTATTTGAAAAGATATCATTCAGGGAATGACGTCAGCCTCTCAAGGAGATCTTTTAGATTCGAGGACGAATCCTTTTGAATAAGGGGAGAATGGTATGAATATCCAAGCCAAGGTGTACACGCTTGGTGAAGAGTTGCATCCTTTCAAACTTGAAAAGGCATATTATCTTCCAAGAATATTCATGAATCTGAACATCCAGATTCATTCAAATATTAAATACATTATGTATCTTTCAAATTCATGTATTTGCATTTAATACGGTTAATATATGGATTTAAAAGGGTGTACGTTGTATTTGGACTATTTAGGCCAAGGGTTGTGCCTTTTCATGGTTTATTCTCAATTACTATAAATAGGATGTACATTTACTTTTCAAACAAAACATTTCATGAATGAAAATTTCAGATTGAGTTTAGTCTCTCTCAAGTTTTAAGCTTTCTTTGTATTATTGTGTTAGAATGCATGTTTTAGAACTTTCAATCTAGTTTGATAAATTATGTTGTGGAGAGTTCGAAATCTTGAATATAGGAACACGTTCTCCTTTTTCCTTGATCATTCATCATCTTTCCAAGCCTAAATCTGTTTAGCTTTCTAAGGGTTGGTTTATCATTTAATTATTTGGGTTATTCTTATTATTATTGTGGGGTTCACCTTGAATAAGGGAGTTCTCATGCATAATTGAGGTAGTTTCTTTATCACTGGGTATCAGTCGGGTTCCATGTATGCTCAAAATCGTAATTTTGGAATGACATTGAGGCCTCTTAAGCCTCCTCAATTGACCACTACTATATCTACTATCCAACCACCTTTACCCATAGAAAAATTCATTCATGTGCCTCCTCCTTGTAGTGCTCATAGTAACCATCCTTTTCACTTAGAAACTTTAGTTTAAAAGAAAGTCGATATAAGTGCTGAAAATAGAGGATGAGAGCTCTCGAACACAGTTGGCATTGTATATGTTGATTATTTGAGGCACCGACAGGAGAAGCGACAGGGGGAACATAAAGAGGAAAGTTCAGGTGTACATAGCATGAAAATTGATGAGAGTTTGAATGAAGAGATTGAGGCAAGGTGTCTGACGCCTCCCTCTGTGACAATGGGAGAAAATTCAGGAAAAGAGGTCGGTTTCAGTAGATTTATCTAGTGGAACAACAAAGAAAAGTAGGGAAGATGATTTTCAGAGGATGACATCTGAGGAATGGGAAGTGATGTTTGAAAATGCTAGGAGGATTGCCAATCAAATTGCTTGGAGAGCTTGTTATATGCAACCACTTGTGCAAGCACTAGTAAGATCTCAAAAAGTAAGTCTCCAAGAAGAGGAGATAGAACTAGAACGGCAGTTACCTCTTGAGATTTCAACGGAAGCGTTATCTAAGAGTTTAGAGGAGGAGGTAACTAGACCTACGCCAAAGGATGGAGATTGTGCAACTCCGCAAGTCACCTTACCTGGAATTGGAGTTCGAGCAGTCTTTGGCGAAGATAGATCACCACCAATAGAAATTTATGGAGATTGGGAAATTGAGTCTTATCCAGCCATGCCGGCTTTAAAGGCTAGAACTTGGATTTTAAAGATTATTTAA

mRNA sequence

ATGATAAGAAAGGGAGGCAAACGTTGCCATCGAGGTTCGTCCTCTAGAACCAAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAAAAGAAGGCTACTAGTAAGGGGTTTAAACCTGAGTCTGCTGTTGCTGCTGCCAAGAAAGGCAAGACCAAAACTGCAGACAAAGGAAAATGTTTCCATTGCAATGTAGATGGGTATTGGAAGTTGAATTGCCCGAAATACCTGGCCGAGAGGAAGAAACCCAACGAAGGAAGTGTTTGGCTTCAACTCGTGGTGGATCTACTTGAGTTTAGAGTGTGGGTACTTAGGAATAAGGCTCACCTAGAAAAGAGGTCGGTTTCAGTAGATTTATCTAGTGGAACAACAAAGAAAAGTAGGGAAGATGATTTTCAGAGGATGACATCTGAGGAATGGGAAGTGATGTTTGAAAATGCTAGGAGGATTGCCAATCAAATTGCTTGGAGAGCTTGTTATATGCAACCACTTGTGCAAGCACTAGTAAGATCTCAAAAAGTAAGTCTCCAAGAAGAGGAGATAGAACTAGAACGGCAGTTACCTCTTGAGATTTCAACGGAAGCGTTATCTAAGAGTTTAGAGGAGGAGGTAACTAGACCTACGCCAAAGGATGGAGATTGTGCAACTCCGCAAGTCACCTTACCTGGAATTGGAGTTCGAGCAGTCTTTGGCGAAGATAGATCACCACCAATAGAAATTTATGGAGATTGGGAAATTGAGTCTTATCCAGCCATGCCGGCTTTAAAGGCTAGAACTTGGATTTTAAAGATTATTTAA

Coding sequence (CDS)

ATGATAAGAAAGGGAGGCAAACGTTGCCATCGAGGTTCGTCCTCTAGAACCAAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAAAAGAAGGCTACTAGTAAGGGGTTTAAACCTGAGTCTGCTGTTGCTGCTGCCAAGAAAGGCAAGACCAAAACTGCAGACAAAGGAAAATGTTTCCATTGCAATGTAGATGGGTATTGGAAGTTGAATTGCCCGAAATACCTGGCCGAGAGGAAGAAACCCAACGAAGGAAGTGTTTGGCTTCAACTCGTGGTGGATCTACTTGAGTTTAGAGTGTGGGTACTTAGGAATAAGGCTCACCTAGAAAAGAGGTCGGTTTCAGTAGATTTATCTAGTGGAACAACAAAGAAAAGTAGGGAAGATGATTTTCAGAGGATGACATCTGAGGAATGGGAAGTGATGTTTGAAAATGCTAGGAGGATTGCCAATCAAATTGCTTGGAGAGCTTGTTATATGCAACCACTTGTGCAAGCACTAGTAAGATCTCAAAAAGTAAGTCTCCAAGAAGAGGAGATAGAACTAGAACGGCAGTTACCTCTTGAGATTTCAACGGAAGCGTTATCTAAGAGTTTAGAGGAGGAGGTAACTAGACCTACGCCAAAGGATGGAGATTGTGCAACTCCGCAAGTCACCTTACCTGGAATTGGAGTTCGAGCAGTCTTTGGCGAAGATAGATCACCACCAATAGAAATTTATGGAGATTGGGAAATTGAGTCTTATCCAGCCATGCCGGCTTTAAAGGCTAGAACTTGGATTTTAAAGATTATTTAA

Protein sequence

MIRKGGKRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNVDGYWKLNCPKYLAERKKPNEGSVWLQLVVDLLEFRVWVLRNKAHLEKRSVSVDLSSGTTKKSREDDFQRMTSEEWEVMFENARRIANQIAWRACYMQPLVQALVRSQKVSLQEEEIELERQLPLEISTEALSKSLEEEVTRPTPKDGDCATPQVTLPGIGVRAVFGEDRSPPIEIYGDWEIESYPAMPALKARTWILKII
Homology
[Close]
BLAST of Moc10g24770 vs. NCBI nr
Match: KAA0054309.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 4.4e-13
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSG+K +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGNKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEGSVWLQLVVDLLE 100
           +G+WK NCPKYLAE+KK  +G + L  +  L++
Sbjct: 272 EGHWKRNCPKYLAEKKKAKQGHINLNRIERLVK 301

[Close]
BLAST of Moc10g24770 vs. NCBI nr
Match: KAA0032020.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 9.9e-13
Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSGSK +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGSKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEGSV 90
           +G+WK NCPKYLAE KK  +G +
Sbjct: 272 EGHWKRNCPKYLAETKKAKQGKM 291

[Close]
BLAST of Moc10g24770 vs. NCBI nr
Match: KAA0051952.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 9.9e-13
Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSG+K +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGNKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEGSV 90
           +G+WK NCPKYLAE+KK  +G +
Sbjct: 272 EGHWKRNCPKYLAEKKKAKQGKM 291

[Close]
BLAST of Moc10g24770 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-12
Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSG+K +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGNKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEG 88
           +G+WK NCPKYLAE+KK  +G
Sbjct: 272 EGHWKRNCPKYLAEKKKAKQG 289

[Close]
BLAST of Moc10g24770 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-12
Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSG+K +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 211 RKFHRGSTSGTKSMPSSSGNKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 270

Query: 67  DGYWKLNCPKYLAERKKPNEG 88
           +G+WK NCPKYLAE+KK  +G
Sbjct: 271 EGHWKRNCPKYLAEKKKAKQG 288

[Close]
BLAST of Moc10g24770 vs. ExPASy TrEMBL
Match: A0A5A7ULH1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00280 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-13
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSG+K +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGNKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEGSVWLQLVVDLLE 100
           +G+WK NCPKYLAE+KK  +G + L  +  L++
Sbjct: 272 EGHWKRNCPKYLAEKKKAKQGHINLNRIERLVK 301

[Close]
BLAST of Moc10g24770 vs. ExPASy TrEMBL
Match: A0A5A7U869 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004290 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-13
Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSG+K +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGNKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEGSV 90
           +G+WK NCPKYLAE+KK  +G +
Sbjct: 272 EGHWKRNCPKYLAEKKKAKQGKM 291

[Close]
BLAST of Moc10g24770 vs. ExPASy TrEMBL
Match: A0A5A7SMN4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G001190 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-13
Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSGSK +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGSKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEGSV 90
           +G+WK NCPKYLAE KK  +G +
Sbjct: 272 EGHWKRNCPKYLAETKKAKQGKM 291

[Close]
BLAST of Moc10g24770 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.2e-13
Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSG+K +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGNKKWKKKKG---GQGNKANLAAAKTTKKAKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEG 88
           +G+WK NCPKYLAE+KK  +G
Sbjct: 272 EGHWKRNCPKYLAEKKKAKQG 289

[Close]
BLAST of Moc10g24770 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.2e-13
Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 0 

Query: 7   KRCHRGSSSRTKSAPSSSGSKTFKKKKATSKGFKPESAVAAAKKGKTKTADKGKCFHCNV 66
           ++ HRGS+S TKS PSSSG+K +KKKK    G   ++ +AAAK  K   A KG CFHCN 
Sbjct: 212 RKFHRGSTSGTKSMPSSSGNKKWKKKKG---GQGNKANLAAAKTTKKTKAAKGICFHCNQ 271

Query: 67  DGYWKLNCPKYLAERKKPNEG 88
           +G+WK NCPKYLAE+KK  +G
Sbjct: 272 EGHWKRNCPKYLAEKKKAKQG 289

The following BLAST results are available for this feature:
BLAST of Moc10g24770 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0054309.14.4e-1351.61gag/pol protein [Cucumis melo var. makuwa][more]
KAA0032020.19.9e-1356.63gag/pol protein [Cucumis melo var. makuwa][more]
KAA0051952.19.9e-1355.42gag/pol protein [Cucumis melo var. makuwa][more]
KAA0044955.11.7e-1256.79gag/pol protein [Cucumis melo var. makuwa][more]
KAA0048404.11.7e-1256.79gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Moc10g24770 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc10g24770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7ULH12.1e-1351.61Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00280... [more]
A0A5A7U8694.8e-1355.42Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00429... [more]
A0A5A7SMN44.8e-1356.63Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G0011... [more]
A0A5A7SMH88.2e-1356.79Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... [more]
A0A5D3CPJ68.2e-1356.79Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... [more]
BLAST of Moc10g24770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 50..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g24770.1Moc10g24770.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding