Moc10g24590 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g24590
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCACTA en-spm transposon protein
Locationchr10: 17673280 .. 17673968 (+)
RNA-Seq ExpressionMoc10g24590
SyntenyMoc10g24590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACGCGATAGATGGGAGACAGATGAGTGGATGGTAGTTTACAAATATAACTTGTGTTTTATATAATTAATATTCAAAATTCTGATGTAAGTTTGTTTCGTTAGCAAAAATCTGAGATCAACAAACGCAATAGGACGATGATGTCGTTCAACCATCGTGCGGGGCCGAAGGCGTTTGCGATAATTGCCAAGGAGAAGGTATAATGAAATAATATTTTTATTTCATATACTTATATATGATCGGTTATCAACAAGTATGTGTTATCAAGTGCAGAAAGATCAAGATGGAGGTGACAATTTTAGTGAAATCGATATGTTCAGAGAGAGGAGATACTCGGAAGCTAAATGTTGGGTCGAAGGCGCAGAGACAACTTATGTAAGTTTACTACTTTTGTAACAATTAACGTTAAATTACATTTCAAATTGTATAGGTAAACACTCTTTTGTTCTTTAAATATGTATATGCAGCTAGACATGATGAGCGCTAGAGAATAATCTATGCAGGATGGCAGCGAACCGATGCCAGACCCAGAAGTATTGGAAATAGTTCTCGGGCATCGATCAGGCTACTTTAAAAGTGCTGGTTGGAGTTCGAAACCTAAATCTCGCAGAGGATCTACTTCAAGTGTAACTTCTTCACAGCGGGAACAAGAGCTGTCTCAAGAAATAAGTACCCTAAGAGAATAA

mRNA sequence

ATGCTACGCGATAGATGGGAGACAGATGAGTGGATGCAAAAATCTGAGATCAACAAACGCAATAGGACGATGATGTCGTTCAACCATCGTGCGGGGCCGAAGGCGTTTGCGATAATTGCCAAGGAGAAGAAAGATCAAGATGGAGGTGACAATTTTAGTGAAATCGATATGTTCAGAGAGAGGAGATACTCGGAAGCTAAATGTTGGGTCGAAGGCGCAGAGACAACTTATGATGGCAGCGAACCGATGCCAGACCCAGAAGTATTGGAAATAGTTCTCGGGCATCGATCAGGCTACTTTAAAAGTGCTGGTTGGAGTTCGAAACCTAAATCTCGCAGAGGATCTACTTCAAGTGTAACTTCTTCACAGCGGGAACAAGAGCTGTCTCAAGAAATAAGTACCCTAAGAGAATAA

Coding sequence (CDS)

ATGCTACGCGATAGATGGGAGACAGATGAGTGGATGCAAAAATCTGAGATCAACAAACGCAATAGGACGATGATGTCGTTCAACCATCGTGCGGGGCCGAAGGCGTTTGCGATAATTGCCAAGGAGAAGAAAGATCAAGATGGAGGTGACAATTTTAGTGAAATCGATATGTTCAGAGAGAGGAGATACTCGGAAGCTAAATGTTGGGTCGAAGGCGCAGAGACAACTTATGATGGCAGCGAACCGATGCCAGACCCAGAAGTATTGGAAATAGTTCTCGGGCATCGATCAGGCTACTTTAAAAGTGCTGGTTGGAGTTCGAAACCTAAATCTCGCAGAGGATCTACTTCAAGTGTAACTTCTTCACAGCGGGAACAAGAGCTGTCTCAAGAAATAAGTACCCTAAGAGAATAA

Protein sequence

MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRERRYSEAKCWVEGAETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRGSTSSVTSSQREQELSQEISTLRE
Homology
BLAST of Moc10g24590 vs. NCBI nr
Match: XP_022156286.1 (uncharacterized protein LOC111023212 [Momordica charantia])

HSP 1 Score: 84.3 bits (207), Expect = 8.7e-13
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0

Query: 2   LRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRER 61
           L DRWET EW + ++ NK+NR  + FNHRAG K+F  +  E K ++G D    +D+F E 
Sbjct: 79  LCDRWETPEWKEITKKNKKNRAKLPFNHRAGSKSFLQLQHELKIKEGSD-IGPVDLFGES 138

Query: 62  RYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSSK 121
            Y+E    V + AE  Y            +G EP+  PE    VLG R  + K  G+  +
Sbjct: 139 HYNEKDGLVNDNAEDAYENMQNLIKAPTQEGCEPVTQPEACRKVLGDRPDHVKGLGYGPQ 198

Query: 122 PK-SRRGSTSSVTSSQ-REQELSQEISTL 136
           P   +RGS+S+VTSS   E+EL +++  +
Sbjct: 199 PTLCKRGSSSNVTSSTLYEKELEKKVEDM 226

BLAST of Moc10g24590 vs. NCBI nr
Match: XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida])

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 0

Query: 1   MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRE 60
           +L +RWET EW +K+E NK++R+ + + HR G K+F  +  E K ++G D   ++D+FR+
Sbjct: 542 LLCNRWETPEWKKKTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQ 601

Query: 61  RRYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSS 120
             + E   WV   A+  Y            +   PM   EV + VLGHRSGY K  G + 
Sbjct: 602 SHFCEKDGWVNNNAKDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNP 661

Query: 121 KPKSRRGSTSSVTS-SQREQELSQEISTLRE 138
           KP     S+SSVTS  Q ++EL +++  + +
Sbjct: 662 KP----SSSSSVTSYLQDKKELEKKMEKMED 687

BLAST of Moc10g24590 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 0

Query: 1   MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRE 60
           +L +RWET EW +K+E NK++R+ + + HR G K+F  +  E K ++G D   ++D+FR+
Sbjct: 730 LLCNRWETPEWKKKTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQ 789

Query: 61  RRYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSS 120
             + E   WV   A+  Y            +   PM   EV + VLGHRSGY K  G + 
Sbjct: 790 SHFCEKDGWVNNNAKDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNP 849

Query: 121 KPKSRRGSTSSVTS-SQREQELSQEISTLRE 138
           KP     S+SSVTS  Q ++EL +++  + +
Sbjct: 850 KP----SSSSSVTSYLQDKKELEKKMEKMED 875

BLAST of Moc10g24590 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 0

Query: 1   MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRE 60
           +L +RWET EW +K+E NK++R+ + + HR G K+F  +  E K ++G D   ++D+FR+
Sbjct: 703 LLCNRWETPEWKKKTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQ 762

Query: 61  RRYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSS 120
             + E   WV   A+  Y            +   PM   EV + VLGHRSGY K  G + 
Sbjct: 763 SHFCEKDGWVNNNAKDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNP 822

Query: 121 KPKSRRGSTSSVTS-SQREQELSQEISTLRE 138
           KP     S+SSVTS  Q ++EL +++  + +
Sbjct: 823 KP----SSSSSVTSYLQDKKELEKKMEKMED 848

BLAST of Moc10g24590 vs. NCBI nr
Match: XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida])

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-08
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0

Query: 1   MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRE 60
           +L DRWE+  W +KS  NK +R+ + FNH  G K+F +  +  K ++ G   S I++F E
Sbjct: 269 ILCDRWESSSWKEKSARNKVSRSKIRFNHCGGSKSF-LSRRVDKGKEDGTYISLIEVFYE 328

Query: 61  RRYSEAKCWV-EGAETTYDG-------SEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSR 118
              S +K WV + A+  Y+         +   D E++ +VLG RS Y    G+  KP  R
Sbjct: 329 THCSASKGWVDQAAKEAYENMLMLRKVEKHKTDEEIIVMVLGKRSSYMNGFGYGPKPPRR 388

BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match: A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.2e-13
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0

Query: 2   LRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRER 61
           L DRWET EW + ++ NK+NR  + FNHRAG K+F  +  E K ++G D    +D+F E 
Sbjct: 79  LCDRWETPEWKEITKKNKKNRAKLPFNHRAGSKSFLQLQHELKIKEGSD-IGPVDLFGES 138

Query: 62  RYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSSK 121
            Y+E    V + AE  Y            +G EP+  PE    VLG R  + K  G+  +
Sbjct: 139 HYNEKDGLVNDNAEDAYENMQNLIKAPTQEGCEPVTQPEACRKVLGDRPDHVKGLGYGPQ 198

Query: 122 PK-SRRGSTSSVTSSQ-REQELSQEISTL 136
           P   +RGS+S+VTSS   E+EL +++  +
Sbjct: 199 PTLCKRGSSSNVTSSTLYEKELEKKVEDM 226

BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match: A0A5A7UQ38 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00210 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.4e-08
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 0

Query: 12  MQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRERRYSEAKCWVE 71
           +++S  NK  R    +NH +G K+F     E  ++  G     +++FRE  +  A  +V 
Sbjct: 152 LEQSRTNKAARQKQPYNHSSGSKSFLQRQYEPAER-RGQPVDRVELFRE-THVRAGTFVS 211

Query: 72  GAETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRGSTSSVTSSQREQELSQE 131
            A     GS+P+ + E+ + VLG R GY K  GW  KPK+RR +++S +S+   Q   +E
Sbjct: 212 QAAEDAHGSQPLSEDEICDQVLGRRPGYLKGVGWGPKPKARRTASASSSSTSSSQSTQKE 270

Query: 132 I 133
           I
Sbjct: 272 I 270

BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match: A0A438G848 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_061681 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0

Query: 9   DEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKK-DQDGGDNFSEIDMFRERRYSEAK 68
           +++ +++ IN  NR  + FNHR G K FA   +        G+   E+++FR   Y+E+K
Sbjct: 229 EKFKKRATINSENREKLPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESK 288

Query: 69  CWVEGA-------------ETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRG 128
            W+                ++T DG  P+ D E+ + VLG RSGY +  G+ S+ K    
Sbjct: 289 GWINDTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKR--- 348

Query: 129 STSSVTSSQREQELSQEISTLRE 138
           ST++    +  + L Q+I+ L E
Sbjct: 349 STTTEFPDEETERLRQQITKLEE 368

BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match: A0A438JSE8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009494 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0

Query: 9   DEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKK-DQDGGDNFSEIDMFRERRYSEAK 68
           +++ +++ IN  NR  + FNHR G K FA   +        G+   E+++FR   Y+E+K
Sbjct: 237 EKFKKRATINSENREKLPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESK 296

Query: 69  CWVEGA-------------ETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRG 128
            W+                ++T DG  P+ D E+ + VLG RSGY +  G+ S+ K    
Sbjct: 297 GWINDTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKR--- 356

Query: 129 STSSVTSSQREQELSQEISTLRE 138
           ST++    +  + L Q+I+ L E
Sbjct: 357 STTTEFPDEETERLRQQITKLEE 376

BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match: A0A438D3L2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_104581 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.1e-08
Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0

Query: 9   DEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEK-KDQDGGDNFSEIDMFRERRYSEAK 68
           +++ +++ IN  NR  + FNHR G K FA   +        G+   E+++FR   Y+E+K
Sbjct: 127 EKFKKRATINSENREKLPFNHRGGSKPFAFHRQHNLMSVATGELQGEVELFRATHYNESK 186

Query: 69  CWVEGA-------------ETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRG 128
            W+                ++T DG  P+ D E+ + VLG RSGY +  G+ S+ K    
Sbjct: 187 GWINDTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKR--- 246

Query: 129 STSSVTSSQREQELSQEISTLRE 138
           ST++    +  + L Q+I+ L E
Sbjct: 247 STTTEFPDEETERLRQQITKLEE 266

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156286.18.7e-1337.58uncharacterized protein LOC111023212 [Momordica charantia][more]
XP_038887413.11.1e-1235.76uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida][more]
XP_038887408.11.1e-1235.76poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida][more]
XP_038887409.11.1e-1235.76poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida][more]
XP_038895319.12.9e-0833.60uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DUH34.2e-1337.58uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5A7UQ382.4e-0833.06CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A438G8483.1e-0830.07Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_061681 PE=4 SV=1[more]
A0A438JSE83.1e-0830.07Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009494 PE=4 SV=1[more]
A0A438D3L24.1e-0830.07Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_104581 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004252Probable transposase, Ptta/En/Spm, plantPFAMPF03004Transposase_24coord: 4..65
e-value: 2.4E-8
score: 34.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g24590.1Moc10g24590.1mRNA