Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACGCGATAGATGGGAGACAGATGAGTGGATGGTAGTTTACAAATATAACTTGTGTTTTATATAATTAATATTCAAAATTCTGATGTAAGTTTGTTTCGTTAGCAAAAATCTGAGATCAACAAACGCAATAGGACGATGATGTCGTTCAACCATCGTGCGGGGCCGAAGGCGTTTGCGATAATTGCCAAGGAGAAGGTATAATGAAATAATATTTTTATTTCATATACTTATATATGATCGGTTATCAACAAGTATGTGTTATCAAGTGCAGAAAGATCAAGATGGAGGTGACAATTTTAGTGAAATCGATATGTTCAGAGAGAGGAGATACTCGGAAGCTAAATGTTGGGTCGAAGGCGCAGAGACAACTTATGTAAGTTTACTACTTTTGTAACAATTAACGTTAAATTACATTTCAAATTGTATAGGTAAACACTCTTTTGTTCTTTAAATATGTATATGCAGCTAGACATGATGAGCGCTAGAGAATAATCTATGCAGGATGGCAGCGAACCGATGCCAGACCCAGAAGTATTGGAAATAGTTCTCGGGCATCGATCAGGCTACTTTAAAAGTGCTGGTTGGAGTTCGAAACCTAAATCTCGCAGAGGATCTACTTCAAGTGTAACTTCTTCACAGCGGGAACAAGAGCTGTCTCAAGAAATAAGTACCCTAAGAGAATAA
mRNA sequence
ATGCTACGCGATAGATGGGAGACAGATGAGTGGATGCAAAAATCTGAGATCAACAAACGCAATAGGACGATGATGTCGTTCAACCATCGTGCGGGGCCGAAGGCGTTTGCGATAATTGCCAAGGAGAAGAAAGATCAAGATGGAGGTGACAATTTTAGTGAAATCGATATGTTCAGAGAGAGGAGATACTCGGAAGCTAAATGTTGGGTCGAAGGCGCAGAGACAACTTATGATGGCAGCGAACCGATGCCAGACCCAGAAGTATTGGAAATAGTTCTCGGGCATCGATCAGGCTACTTTAAAAGTGCTGGTTGGAGTTCGAAACCTAAATCTCGCAGAGGATCTACTTCAAGTGTAACTTCTTCACAGCGGGAACAAGAGCTGTCTCAAGAAATAAGTACCCTAAGAGAATAA
Coding sequence (CDS)
ATGCTACGCGATAGATGGGAGACAGATGAGTGGATGCAAAAATCTGAGATCAACAAACGCAATAGGACGATGATGTCGTTCAACCATCGTGCGGGGCCGAAGGCGTTTGCGATAATTGCCAAGGAGAAGAAAGATCAAGATGGAGGTGACAATTTTAGTGAAATCGATATGTTCAGAGAGAGGAGATACTCGGAAGCTAAATGTTGGGTCGAAGGCGCAGAGACAACTTATGATGGCAGCGAACCGATGCCAGACCCAGAAGTATTGGAAATAGTTCTCGGGCATCGATCAGGCTACTTTAAAAGTGCTGGTTGGAGTTCGAAACCTAAATCTCGCAGAGGATCTACTTCAAGTGTAACTTCTTCACAGCGGGAACAAGAGCTGTCTCAAGAAATAAGTACCCTAAGAGAATAA
Protein sequence
MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRERRYSEAKCWVEGAETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRGSTSSVTSSQREQELSQEISTLRE
Homology
BLAST of Moc10g24590 vs. NCBI nr
Match:
XP_022156286.1 (uncharacterized protein LOC111023212 [Momordica charantia])
HSP 1 Score: 84.3 bits (207), Expect = 8.7e-13
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0
Query: 2 LRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRER 61
L DRWET EW + ++ NK+NR + FNHRAG K+F + E K ++G D +D+F E
Sbjct: 79 LCDRWETPEWKEITKKNKKNRAKLPFNHRAGSKSFLQLQHELKIKEGSD-IGPVDLFGES 138
Query: 62 RYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSSK 121
Y+E V + AE Y +G EP+ PE VLG R + K G+ +
Sbjct: 139 HYNEKDGLVNDNAEDAYENMQNLIKAPTQEGCEPVTQPEACRKVLGDRPDHVKGLGYGPQ 198
Query: 122 PK-SRRGSTSSVTSSQ-REQELSQEISTL 136
P +RGS+S+VTSS E+EL +++ +
Sbjct: 199 PTLCKRGSSSNVTSSTLYEKELEKKVEDM 226
BLAST of Moc10g24590 vs. NCBI nr
Match:
XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida])
HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 0
Query: 1 MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRE 60
+L +RWET EW +K+E NK++R+ + + HR G K+F + E K ++G D ++D+FR+
Sbjct: 542 LLCNRWETPEWKKKTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQ 601
Query: 61 RRYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSS 120
+ E WV A+ Y + PM EV + VLGHRSGY K G +
Sbjct: 602 SHFCEKDGWVNNNAKDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNP 661
Query: 121 KPKSRRGSTSSVTS-SQREQELSQEISTLRE 138
KP S+SSVTS Q ++EL +++ + +
Sbjct: 662 KP----SSSSSVTSYLQDKKELEKKMEKMED 687
BLAST of Moc10g24590 vs. NCBI nr
Match:
XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida])
HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 0
Query: 1 MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRE 60
+L +RWET EW +K+E NK++R+ + + HR G K+F + E K ++G D ++D+FR+
Sbjct: 730 LLCNRWETPEWKKKTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQ 789
Query: 61 RRYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSS 120
+ E WV A+ Y + PM EV + VLGHRSGY K G +
Sbjct: 790 SHFCEKDGWVNNNAKDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNP 849
Query: 121 KPKSRRGSTSSVTS-SQREQELSQEISTLRE 138
KP S+SSVTS Q ++EL +++ + +
Sbjct: 850 KP----SSSSSVTSYLQDKKELEKKMEKMED 875
BLAST of Moc10g24590 vs. NCBI nr
Match:
XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])
HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 0
Query: 1 MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRE 60
+L +RWET EW +K+E NK++R+ + + HR G K+F + E K ++G D ++D+FR+
Sbjct: 703 LLCNRWETPEWKKKTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQ 762
Query: 61 RRYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSS 120
+ E WV A+ Y + PM EV + VLGHRSGY K G +
Sbjct: 763 SHFCEKDGWVNNNAKDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNP 822
Query: 121 KPKSRRGSTSSVTS-SQREQELSQEISTLRE 138
KP S+SSVTS Q ++EL +++ + +
Sbjct: 823 KP----SSSSSVTSYLQDKKELEKKMEKMED 848
BLAST of Moc10g24590 vs. NCBI nr
Match:
XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida])
HSP 1 Score: 69.3 bits (168), Expect = 2.9e-08
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0
Query: 1 MLRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRE 60
+L DRWE+ W +KS NK +R+ + FNH G K+F + + K ++ G S I++F E
Sbjct: 269 ILCDRWESSSWKEKSARNKVSRSKIRFNHCGGSKSF-LSRRVDKGKEDGTYISLIEVFYE 328
Query: 61 RRYSEAKCWV-EGAETTYDG-------SEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSR 118
S +K WV + A+ Y+ + D E++ +VLG RS Y G+ KP R
Sbjct: 329 THCSASKGWVDQAAKEAYENMLMLRKVEKHKTDEEIIVMVLGKRSSYMNGFGYGPKPPRR 388
BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match:
A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 4.2e-13
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0
Query: 2 LRDRWETDEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRER 61
L DRWET EW + ++ NK+NR + FNHRAG K+F + E K ++G D +D+F E
Sbjct: 79 LCDRWETPEWKEITKKNKKNRAKLPFNHRAGSKSFLQLQHELKIKEGSD-IGPVDLFGES 138
Query: 62 RYSEAKCWV-EGAETTY------------DGSEPMPDPEVLEIVLGHRSGYFKSAGWSSK 121
Y+E V + AE Y +G EP+ PE VLG R + K G+ +
Sbjct: 139 HYNEKDGLVNDNAEDAYENMQNLIKAPTQEGCEPVTQPEACRKVLGDRPDHVKGLGYGPQ 198
Query: 122 PK-SRRGSTSSVTSSQ-REQELSQEISTL 136
P +RGS+S+VTSS E+EL +++ +
Sbjct: 199 PTLCKRGSSSNVTSSTLYEKELEKKVEDM 226
BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match:
A0A5A7UQ38 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00210 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 2.4e-08
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 0
Query: 12 MQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKKDQDGGDNFSEIDMFRERRYSEAKCWVE 71
+++S NK R +NH +G K+F E ++ G +++FRE + A +V
Sbjct: 152 LEQSRTNKAARQKQPYNHSSGSKSFLQRQYEPAER-RGQPVDRVELFRE-THVRAGTFVS 211
Query: 72 GAETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRGSTSSVTSSQREQELSQE 131
A GS+P+ + E+ + VLG R GY K GW KPK+RR +++S +S+ Q +E
Sbjct: 212 QAAEDAHGSQPLSEDEICDQVLGRRPGYLKGVGWGPKPKARRTASASSSSTSSSQSTQKE 270
Query: 132 I 133
I
Sbjct: 272 I 270
BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match:
A0A438G848 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_061681 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 9 DEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKK-DQDGGDNFSEIDMFRERRYSEAK 68
+++ +++ IN NR + FNHR G K FA + G+ E+++FR Y+E+K
Sbjct: 229 EKFKKRATINSENREKLPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESK 288
Query: 69 CWVEGA-------------ETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRG 128
W+ ++T DG P+ D E+ + VLG RSGY + G+ S+ K
Sbjct: 289 GWINDTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKR--- 348
Query: 129 STSSVTSSQREQELSQEISTLRE 138
ST++ + + L Q+I+ L E
Sbjct: 349 STTTEFPDEETERLRQQITKLEE 368
BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match:
A0A438JSE8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009494 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 9 DEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEKK-DQDGGDNFSEIDMFRERRYSEAK 68
+++ +++ IN NR + FNHR G K FA + G+ E+++FR Y+E+K
Sbjct: 237 EKFKKRATINSENREKLPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESK 296
Query: 69 CWVEGA-------------ETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRG 128
W+ ++T DG P+ D E+ + VLG RSGY + G+ S+ K
Sbjct: 297 GWINDTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKR--- 356
Query: 129 STSSVTSSQREQELSQEISTLRE 138
ST++ + + L Q+I+ L E
Sbjct: 357 STTTEFPDEETERLRQQITKLEE 376
BLAST of Moc10g24590 vs. ExPASy TrEMBL
Match:
A0A438D3L2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_104581 PE=4 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 4.1e-08
Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 9 DEWMQKSEINKRNRTMMSFNHRAGPKAFAIIAKEK-KDQDGGDNFSEIDMFRERRYSEAK 68
+++ +++ IN NR + FNHR G K FA + G+ E+++FR Y+E+K
Sbjct: 127 EKFKKRATINSENREKLPFNHRGGSKPFAFHRQHNLMSVATGELQGEVELFRATHYNESK 186
Query: 69 CWVEGA-------------ETTYDGSEPMPDPEVLEIVLGHRSGYFKSAGWSSKPKSRRG 128
W+ ++T DG P+ D E+ + VLG RSGY + G+ S+ K
Sbjct: 187 GWINDTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKR--- 246
Query: 129 STSSVTSSQREQELSQEISTLRE 138
ST++ + + L Q+I+ L E
Sbjct: 247 STTTEFPDEETERLRQQITKLEE 266
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156286.1 | 8.7e-13 | 37.58 | uncharacterized protein LOC111023212 [Momordica charantia] | [more] |
XP_038887413.1 | 1.1e-12 | 35.76 | uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida] | [more] |
XP_038887408.1 | 1.1e-12 | 35.76 | poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida] | [more] |
XP_038887409.1 | 1.1e-12 | 35.76 | poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida] | [more] |
XP_038895319.1 | 2.9e-08 | 33.60 | uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DUH3 | 4.2e-13 | 37.58 | uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7UQ38 | 2.4e-08 | 33.06 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A438G848 | 3.1e-08 | 30.07 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_061681 PE=4 SV=1 | [more] |
A0A438JSE8 | 3.1e-08 | 30.07 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009494 PE=4 SV=1 | [more] |
A0A438D3L2 | 4.1e-08 | 30.07 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_104581 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |