Moc10g24300 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g24300
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr10: 17460917 .. 17464471 (-)
RNA-Seq ExpressionMoc10g24300
SyntenyMoc10g24300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCCTTACCGATCTCTACCAGGTGAGCACTTTGCAGCTTCAAGTATTTGTCATAGCATCTTCTCCTAATGTACATTTTGTCCTTAGCAGGTTTTCAATCGTCTAGTGGTATTCTCGGGTCGGGTTGTCGATGAAATTAACCACCTGCGCTGCCACTATGCCTCTCGGGAAGAGCTGGATCAGGCCCTTTCTTCCTTGAACCAAACCAACAGTCTTCTGGAGAGTACCCAACACGAGTTGGAAACGGAGAAGAGAAATCTCGAGATGAGTTGGCCAACCTGCAGAGGAGACTTGACGAGGCCAACGCTCGGCTCTCTAACTCTGAATTCTTGGCTGAGGAATTCAAAAAACTCAAGAGTACGTCGACTTGCAAAATTCTGCCATGGAGTGCGGCGTTTCCTGGTCTCTTCGCCAAGTTTCTAACCAGCACCCTGATATTGACTTCTCTTCCTCCTCCTGGAGCGTTTTAGAGCCGAGCATGATTCTCCTGACGACATGGATGAAAACGACAACGAGGAGTAATAGGGTAGCTTGAGAGGGTAGCGAGTTTCTTTACCTGTGTTTAGCGCTCGGTTATTTGCTTTGTTACTATCTTCGCTTTTATTTTCTTTCTTTTTGGAATCATCAATTAACCCTCTGCTACCAACAATTATTGGCTTACGACTCTAACTCTGATGGAGTTGACTTTGTTGCCTTCATTTTCATAGGTTTCTAACCCTTTGGCCATAGCCAATGGTTTTATACCCGCTGTCGTTTGGCTTTTTACTCCATCTTATGTTTTAAACTAACCGTGCTAGTCATCGACCCGCTTCTGGTTTTGGCCGTGTTGAGATTTTTTAATTGTTCCTTCGAAATTTGTCTATTAATGTAGATTCGTGCTCATCGCACCCTAAGTAACAAAAGAAAGGAATGCTTCTGCTTTCAAAATTTGTCGATTAATGTAGATTTGTGCCTCATTGCACCTGTCTGCGTCGAGCAGTGGTCGGATCCGAGCCGTGCCCGACTGGGTAGGACACGAGCCCTGCTCGGCTCAGGCTGTTTTTACCAGCTGCGTTCGTCGTCGAGTCGGTCATGACCTGTTGCCCCCTACTCTCAAGGTAGTGTATTATCGATATTCCTTGAGAGTATGTTTGTAGACGAGGCAAGGTGTTTTATCAAAGTTGCTTGGCATCCAATTTTGGATTTAGAAGACATAGTTGATAAGGAATCCGGCTAATGCATACTTTATTGAATAAAGAAACAATAATCGGAAATCTTGCTAAAGTAGAAGAAGAAAACAATCTTAATTCACCACACTTGAAGGGAAAAGGAAAGGAAAGATCAATGGCCACCCGTAGTAGAAGTCTTGTCATTGCCATTGCCCCCCATTGAGGTATAGTAGCACTCACGCCACTCGTTGCTCTCCTTTAATTTCTCCTACTCCACCAGGGGTTGGGAACTTCATGGACTGGTGGTATGTGGATGGTATCGCTTTGAGCATATACATTGTTTGTCTTTCCAATATTGCGTTGTAGGAGGATGTGTAGTCGACGACCAAAAAGTCCACCATTTTGGTGATACTTTTTGGCCCACTTTCGAACGTTACAGGCAACTCTATTATCCCCTTGGGAATGACCCGTTCCCCTCCAAATCCTATTAATGGTGTCAGGCTGCTCTTAAGCATCTCTTTTCCTAGATCCATGGCTTTGTAGGCTGTCAAAGAGATCATATCTGCTGAGCTGCCCCCATCCACCAAAATTCGATGTACTTTCGCGTTGGCTATTTTCAAGGTGATAAGCAGCGCATCGTTATGCGGTGGAGGAGGTGAGTCACCACGTCCTTTGAAAACTCGATCTTCGTAGACCAGTCCGCAACATATGCATGGTAGACCTCACTTTGTTCGAGGCTCGCCCTAGCTTCTCGTACATCTGCCTTTCTTTTTTCTCTTGGACTCTCTCTCTATTGGCCTCCCATTATAGTTCGAATCTCTCGAGCAGGTGACTTGTCATTCTCGCCTTTTTGTGTCGCTTTAGGGTCCTCTACATACTCTTTTGAGGTACCCCCTCCGGATGAGCCTTTCCACCTCTTCCTTGAGGTCAAAACAATCCTAAGTTGCATAGCCATGATCTCTGTGGAAAAGGCAATATCGGCCTTTGCTTCGTTTAGTCGGCGGTGCCTTCATCCTCTTGGCCATTTGAGCAACCTTTGGTCTTTGATCTCCATTAGTACTTGCTCGAGTGGAACGGTGATCGGTGTATACTTTTCGAATTTCCAAGGTGGATCTTTCCTACTACTCCGATCTCTTTTCTCCCATCTCGACCCCTACGGCTTATCTCCCGACCTCTCCCTTTTCTGGTCGGACCGTTTTCCTTCTGGCTCCTTTTTTTTAGTAAAAGAACTCACCAGCGCTCATGTACTTATGAGCTCGGCTCAACGCCTCCGAGAAGTGCTCGGTGTCTTCTTCCCGCCGAACGAAATGATAAATGTTCATCCCTGATACCGGACATGAAGGCCAGTAGAGTACACAGCGTCTGTAAGGCCCTCCACCTACAGCTTTTCCTCGTTGAATCGAGCTACACAGTCGTGTAGACTCTTGCTTAATAGTTAAAAGATAAGCCAAGCCACGGGTCGGCTCCACACACCGTCCCCCTACAACTAGGTCACGAATGCCCTAGCCAGGCTTTTGAAGCTCGAGATTAACCCTCGTTTTAATTGTCGGAACCATATTATGGCCGACCCGTTCATGTGGTCGAGAACACCCACATCTGATCGCCTCTGACACCCCGTAGATATCCATTCATTCTCGATAAGCATCTAGATGGTCCACTGGGTCGGTCGTCCCGTCGAACTGTTTCACACCGTGGGTAGCTTGAATTTTGGAGGGACCTTCTCCTTCATGATCTCCTCCGTAAATTGTGAGTCGACTTGATCCAGTAGTTTCTTTGAGGTCGAATCCCTTCCCCTTTTGGTTTTGTTGTTGCTTCTCCGACAACTCTGGCCGATCCGTCGGTTTTGCCTTTGTCGAGGTCTATCGGCTCAAAGTTTCGGTTATCCTAGTTGTTCTTGCCCCCGTTTGGTATCAGGGATTTATGTTGTTTTTTGCTCTTTTGGGAGTCGAAATCTGGGTTCGTCGCCTGGTGTTTCCACCTATCTTCAGTTTGCTCCCTGCACTGTTTGTTGACTCCTTAGTCTCGCTTTGTTGTGCTAGGCCCTTCCCTTTTCTCGGGTCTCTAACAAGGGGTACCTCATCGGGCTCTTGTTGCTCGAATTGTTGAAGGAGTTGGGTCATGCATTGTAACATGCCCTCTACCTTGTCTTCCAAGGCCGCGAACTACTTTTGGGAGCAGCTCAGGGATCGTTATTCCATGCGCCTCGGGCAACGCTTCCTGACATTCCGGGTTCGATCGTTTGTCCCATCCTCGGGTCTTCCGACCTGGGGGTCGTCCAAGTTCAACCTCCTCTTGGCAGAGCAGTTATCATTAGAGCATCATGGACTCCTTTCTGGTGGGCGCCAATTGTTGATGTGTGGATTTCGGTCTCCGGTTCTCCGGTTCTCCTCCTCGCACACACCTAA

mRNA sequence

ATGTGCCTTACCGATCTCTACCAGGTTTTCAATCGTCTAGTGGTATTCTCGGGTCGGGTTGTCGATGAAATTAACCACCTGCGCTGCCACTATGCCTCTCGGGAAGAGCTGGATCAGGCCCTTTCTTCCTTGAACCAAACCAACAGTCTTCTGGAGAGTACCCAACACGAGTTGGAAACGGAGAAGAGAAATCTCGAGATGAGTTGGCCAACCTGCAGAGGAGACTTGACGAGGCCAACGCTCGGCTCTCTAACTCTGAATTCTTGGCTGAGGAATTCAAAAAACTCAAGAGTACGTCGACTTGCAAAATTCTGCCATGGAGTGCGGCGTTTCCTGATTTGTGCCTCATTGCACCTGTCTGCGTCGAGCAGTGGTCGGATCCGAGCCGTGCCCGACTGGGTAGGACACGAGCCCTGCTCGGCTCAGGCTGTTTTTACCAGCTGCGTTCGTCGTCGAGTCGGTCATGACCTGTTGCCCCCTACTCTCAAGGCTGTCAAAGAGATCATATCTGCTGAGCTGCCCCCATCCACCAAAATTCGATGTACTTTCGCGTTGGCTATTTTCAAGGTGATAAGCAGCGCATCGTTATGCGGTGGAGGAGGGTCCTCTACATACTCTTTTGAGGTACCCCCTCCGGATGAGCCTTTCCACCTCTTCCTTGAGGTCAAAACAATCCTAAGTTGCATAGCCATGATCTCTGTGGAAAAGGCAATATCGGCCTTTGCTTCGTTTAGTCGGCGGTGCCTTCATCCTCTTGGCCATTTGAGCAACCTTTGGTCTTTGATCTCCATTAGTACTTGCTCGAGTGGAACGGTGATCGGTGTATACTTTTCGAATTTCCAAGGTGGATCTTTCCTACTACTCCGATCTCTTTTCTCCCATCTCGACCCCTACGGCTTATCTCCCGACCTCTCCCTTTTCTGGTCGGACCGTTTTCCTTCTGGCTCCTTTTTTTTAGTAAAAGAACTCACCAGCGCTCATGTACTTATGAGCTCGGCTCAACGCCTCCGAGAAGTGCTCGTCGAAATCTGGGTTCGTCGCCTGGTGTTTCCACCTATCTTCAGTTTGCTCCCTGCACTGTTTGTTGACTCCTTAGTCTCGCTTTGTTGTGCTAGGCCCTTCCCTTTTCTCGGGTCTCTAACAAGGGGCCGCGAACTACTTTTGGGAGCAGCTCAGGGATCGTTATTCCATGCGCCTCGGGCAACGCTTCCTGACATTCCGGGTTCGATCGTTTGTCCCATCCTCGGGTCTTCCGACCTGGGGGTCGTCCAAGTTCAACCTCCTCTTGGCAGAGCAGTTATCATTAGAGCATCATGGACTCCTTTCTGGTGGGCGCCAATTGTTGATGTGTGGATTTCGGTCTCCGGTTCTCCGGTTCTCCTCCTCGCACACACCTAA

Coding sequence (CDS)

ATGTGCCTTACCGATCTCTACCAGGTTTTCAATCGTCTAGTGGTATTCTCGGGTCGGGTTGTCGATGAAATTAACCACCTGCGCTGCCACTATGCCTCTCGGGAAGAGCTGGATCAGGCCCTTTCTTCCTTGAACCAAACCAACAGTCTTCTGGAGAGTACCCAACACGAGTTGGAAACGGAGAAGAGAAATCTCGAGATGAGTTGGCCAACCTGCAGAGGAGACTTGACGAGGCCAACGCTCGGCTCTCTAACTCTGAATTCTTGGCTGAGGAATTCAAAAAACTCAAGAGTACGTCGACTTGCAAAATTCTGCCATGGAGTGCGGCGTTTCCTGATTTGTGCCTCATTGCACCTGTCTGCGTCGAGCAGTGGTCGGATCCGAGCCGTGCCCGACTGGGTAGGACACGAGCCCTGCTCGGCTCAGGCTGTTTTTACCAGCTGCGTTCGTCGTCGAGTCGGTCATGACCTGTTGCCCCCTACTCTCAAGGCTGTCAAAGAGATCATATCTGCTGAGCTGCCCCCATCCACCAAAATTCGATGTACTTTCGCGTTGGCTATTTTCAAGGTGATAAGCAGCGCATCGTTATGCGGTGGAGGAGGGTCCTCTACATACTCTTTTGAGGTACCCCCTCCGGATGAGCCTTTCCACCTCTTCCTTGAGGTCAAAACAATCCTAAGTTGCATAGCCATGATCTCTGTGGAAAAGGCAATATCGGCCTTTGCTTCGTTTAGTCGGCGGTGCCTTCATCCTCTTGGCCATTTGAGCAACCTTTGGTCTTTGATCTCCATTAGTACTTGCTCGAGTGGAACGGTGATCGGTGTATACTTTTCGAATTTCCAAGGTGGATCTTTCCTACTACTCCGATCTCTTTTCTCCCATCTCGACCCCTACGGCTTATCTCCCGACCTCTCCCTTTTCTGGTCGGACCGTTTTCCTTCTGGCTCCTTTTTTTTAGTAAAAGAACTCACCAGCGCTCATGTACTTATGAGCTCGGCTCAACGCCTCCGAGAAGTGCTCGTCGAAATCTGGGTTCGTCGCCTGGTGTTTCCACCTATCTTCAGTTTGCTCCCTGCACTGTTTGTTGACTCCTTAGTCTCGCTTTGTTGTGCTAGGCCCTTCCCTTTTCTCGGGTCTCTAACAAGGGGCCGCGAACTACTTTTGGGAGCAGCTCAGGGATCGTTATTCCATGCGCCTCGGGCAACGCTTCCTGACATTCCGGGTTCGATCGTTTGTCCCATCCTCGGGTCTTCCGACCTGGGGGTCGTCCAAGTTCAACCTCCTCTTGGCAGAGCAGTTATCATTAGAGCATCATGGACTCCTTTCTGGTGGGCGCCAATTGTTGATGTGTGGATTTCGGTCTCCGGTTCTCCGGTTCTCCTCCTCGCACACACCTAA

Protein sequence

MCLTDLYQVFNRLVVFSGRVVDEINHLRCHYASREELDQALSSLNQTNSLLESTQHELETEKRNLEMSWPTCRGDLTRPTLGSLTLNSWLRNSKNSRVRRLAKFCHGVRRFLICASLHLSASSSGRIRAVPDWVGHEPCSAQAVFTSCVRRRVGHDLLPPTLKAVKEIISAELPPSTKIRCTFALAIFKVISSASLCGGGGSSTYSFEVPPPDEPFHLFLEVKTILSCIAMISVEKAISAFASFSRRCLHPLGHLSNLWSLISISTCSSGTVIGVYFSNFQGGSFLLLRSLFSHLDPYGLSPDLSLFWSDRFPSGSFFLVKELTSAHVLMSSAQRLREVLVEIWVRRLVFPPIFSLLPALFVDSLVSLCCARPFPFLGSLTRGRELLLGAAQGSLFHAPRATLPDIPGSIVCPILGSSDLGVVQVQPPLGRAVIIRASWTPFWWAPIVDVWISVSGSPVLLLAHT
Homology
[Close]
BLAST of Moc10g24300 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia])

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-15
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0 

Query: 3    LTDLYQVFNRLVVFSGRVVDEINHLRCHYASREELDQALSSLNQTNSLLESTQHELETEK 62
            L+DL+Q+FNRLVVFSG V DEINHLRCHY  RE+L+QA+SSLNQ NSLLE TQ +LE EK
Sbjct: 1109 LSDLHQIFNRLVVFSGWVADEINHLRCHYTPREKLEQAISSLNQANSLLEGTQRKLEMEK 1168

Query: 63   R 64
            R
Sbjct: 1169 R 1169

[Close]
BLAST of Moc10g24300 vs. NCBI nr
Match: XP_022147193.1 (uncharacterized protein LOC111016203 [Momordica charantia])

HSP 1 Score: 82.8 bits (203), Expect = 8.6e-12
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 2   CLTDLYQVFNRLVVFSGRVVDEINHLRCHYASREELDQALSSLNQTNSLLESTQHELETE 61
           CL+DL+QVFN  VVFSGRV DEINHLR H+A R+ELDQ L+SL+Q N LL + +H+LE  
Sbjct: 94  CLSDLHQVFNPSVVFSGRVTDEINHLRSHHARRDELDQTLASLDQANMLLANVRHDLEVG 153

Query: 62  K 63
           K
Sbjct: 154 K 154

[Close]
BLAST of Moc10g24300 vs. NCBI nr
Match: XP_022150031.1 (uncharacterized protein LOC111018304 [Momordica charantia])

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-06
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 13  LVVFSGRVVDEINHLRCHYASREELDQALSSLNQTNSLLESTQHELETEKR 64
           ++V S RV D+INHLR HY    ELDQAL+SLNQ NS+L +TQH+LE E+R
Sbjct: 93  ILVISIRVADKINHLRRHYTPPNELDQALASLNQANSMLANTQHDLEVERR 143

[Close]
BLAST of Moc10g24300 vs. ExPASy TrEMBL
Match: A0A6J1DSS1 (uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023586 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-15
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0 

Query: 3    LTDLYQVFNRLVVFSGRVVDEINHLRCHYASREELDQALSSLNQTNSLLESTQHELETEK 62
            L+DL+Q+FNRLVVFSG V DEINHLRCHY  RE+L+QA+SSLNQ NSLLE TQ +LE EK
Sbjct: 1109 LSDLHQIFNRLVVFSGWVADEINHLRCHYTPREKLEQAISSLNQANSLLEGTQRKLEMEK 1168

Query: 63   R 64
            R
Sbjct: 1169 R 1169

[Close]
BLAST of Moc10g24300 vs. ExPASy TrEMBL
Match: A0A6J1D0L6 (uncharacterized protein LOC111016203 OS=Momordica charantia OX=3673 GN=LOC111016203 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-12
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 2   CLTDLYQVFNRLVVFSGRVVDEINHLRCHYASREELDQALSSLNQTNSLLESTQHELETE 61
           CL+DL+QVFN  VVFSGRV DEINHLR H+A R+ELDQ L+SL+Q N LL + +H+LE  
Sbjct: 94  CLSDLHQVFNPSVVFSGRVTDEINHLRSHHARRDELDQTLASLDQANMLLANVRHDLEVG 153

Query: 62  K 63
           K
Sbjct: 154 K 154

[Close]
BLAST of Moc10g24300 vs. ExPASy TrEMBL
Match: A0A6J1DA80 (uncharacterized protein LOC111018304 OS=Momordica charantia OX=3673 GN=LOC111018304 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-07
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 13  LVVFSGRVVDEINHLRCHYASREELDQALSSLNQTNSLLESTQHELETEKR 64
           ++V S RV D+INHLR HY    ELDQAL+SLNQ NS+L +TQH+LE E+R
Sbjct: 93  ILVISIRVADKINHLRRHYTPPNELDQALASLNQANSMLANTQHDLEVERR 143

The following BLAST results are available for this feature:
BLAST of Moc10g24300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156747.12.2e-1575.41uncharacterized protein LOC111023586 [Momordica charantia][more]
XP_022147193.18.6e-1265.57uncharacterized protein LOC111016203 [Momordica charantia][more]
XP_022150031.11.4e-0662.75uncharacterized protein LOC111018304 [Momordica charantia][more]
BLAST of Moc10g24300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc10g24300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DSS11.1e-1575.41uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1D0L64.1e-1265.57uncharacterized protein LOC111016203 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DA806.9e-0762.75uncharacterized protein LOC111018304 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
BLAST of Moc10g24300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g24300.1Moc10g24300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding