Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCACCCGAGCTCGCCAGTATATTGACGGTCTAGAGCTGTGGAAGGCCAATGGAGCCAGGCGAAGCAACTGTGGTAAAGATCGGGACCAAAAGTCCCCCCTCCCAAAAAGCAACGCGGTGATGATCGGGCTCGTCTCGACAGGCCGATGACAACAAGAATAAAGGTCGTCGCGACGAGAGAGTCCCTTCAGACCGTCGAGGGCCGAAGTTCGACTAGTTCACTTCACTGAACGCTTCGATCGCGGAAATCTACGCGGCAGCTGAAGATACTGACTTGGAGGCGCTGTTCGCGGCCCCAGAAAAGCTCCGCCGACCTTCAGGGAAGCGTGACAAGCGACTCTACTGCCAATTCCACAAGGATCATGGCCATGACACTTCTCGTTGCTTCCACTTGAAGGAACAGATCAAGAACTTTATCCGAAGAGGTTACTTGAAGAAGTACGTCGGCAGCCGAGAACGGGCTGAGCCAAAAGGATCGGCTCGGGAGGAGAAGCGAGAAAGGTCACCACCGCCCAAACGAAAGGAAGCTCGTCCTGCCGTTATAAACACCATTCACGGGGGTCTAAGCGGGGGGCAGTCTAGGCAAAAGAGGAAAGCCCTAGCCCGGGAAGCCGCGAACGAAGTCTGCACCTCATACCCGAAGGAGCCAGTGATGCCGATCTTGTTCGGCGAGCAGGACGGCAAAGGGGTCCATATGCCTCATAATGACGCCCTAGTAATTGCCCCACAAATAGACCATGTGAAGGTCAGAAGGGTCCTCGTCGACACCGAAGCGTCGACTAATATATTGCCTTTCTCGACCTACACGACCCTAGGGTGGAAAGAAGACATTTGA
mRNA sequence
ATGCTCACCCGAGCTCGCCAGTATATTGACGGTCTAGAGCTGTGGAAGGCCAATGGAGCCAGGCGAAGCAACTGTGCTGAAGATACTGACTTGGAGGCGCTGTTCGCGGCCCCAGAAAAGCTCCGCCGACCTTCAGGGAAGCGTGACAAGCGACTCTACTGCCAATTCCACAAGGATCATGGCCATGACACTTCTCGTTGCTTCCACTTGAAGGAACAGATCAAGAACTTTATCCGAAGAGGTTACTTGAAGAAGTACGTCGGCAGCCGAGAACGGGCTGAGCCAAAAGGATCGGCTCGGGAGGAGAAGCGAGAAAGGTCACCACCGCCCAAACGAAAGGAAGCTCGTCCTGCCGTTATAAACACCATTCACGGGGGTCTAAGCGGGGGGCAGTCTAGGCAAAAGAGGAAAGCCCTAGCCCGGGAAGCCGCGAACGAAGTCTGCACCTCATACCCGAAGGAGCCAGTGATGCCGATCTTGTTCGGCGAGCAGGACGGCAAAGGGGTCCATATGCCTCATAATGACGCCCTAGTAATTGCCCCACAAATAGACCATGTGAAGGTCAGAAGGGTCCTCGTCGACACCGAAGCGTCGACTAATATATTGCCTTTCTCGACCTACACGACCCTAGGGTGGAAAGAAGACATTTGA
Coding sequence (CDS)
ATGCTCACCCGAGCTCGCCAGTATATTGACGGTCTAGAGCTGTGGAAGGCCAATGGAGCCAGGCGAAGCAACTGTGCTGAAGATACTGACTTGGAGGCGCTGTTCGCGGCCCCAGAAAAGCTCCGCCGACCTTCAGGGAAGCGTGACAAGCGACTCTACTGCCAATTCCACAAGGATCATGGCCATGACACTTCTCGTTGCTTCCACTTGAAGGAACAGATCAAGAACTTTATCCGAAGAGGTTACTTGAAGAAGTACGTCGGCAGCCGAGAACGGGCTGAGCCAAAAGGATCGGCTCGGGAGGAGAAGCGAGAAAGGTCACCACCGCCCAAACGAAAGGAAGCTCGTCCTGCCGTTATAAACACCATTCACGGGGGTCTAAGCGGGGGGCAGTCTAGGCAAAAGAGGAAAGCCCTAGCCCGGGAAGCCGCGAACGAAGTCTGCACCTCATACCCGAAGGAGCCAGTGATGCCGATCTTGTTCGGCGAGCAGGACGGCAAAGGGGTCCATATGCCTCATAATGACGCCCTAGTAATTGCCCCACAAATAGACCATGTGAAGGTCAGAAGGGTCCTCGTCGACACCGAAGCGTCGACTAATATATTGCCTTTCTCGACCTACACGACCCTAGGGTGGAAAGAAGACATTTGA
Protein sequence
MLTRARQYIDGLELWKANGARRSNCAEDTDLEALFAAPEKLRRPSGKRDKRLYCQFHKDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSRERAEPKGSAREEKRERSPPPKRKEARPAVINTIHGGLSGGQSRQKRKALAREAANEVCTSYPKEPVMPILFGEQDGKGVHMPHNDALVIAPQIDHVKVRRVLVDTEASTNILPFSTYTTLGWKEDI
Homology
BLAST of Moc10g24180 vs. NCBI nr
Match:
XP_022158844.1 (uncharacterized protein LOC111025310 [Momordica charantia])
HSP 1 Score: 318.5 bits (815), Expect = 4.3e-83
Identity = 172/276 (62.32%), Postives = 187/276 (67.75%), Query Frame = 0
Query: 1 MLTRARQYIDGLELWKANGARRSN------------------------------------ 60
M RARQYIDGLELWKANGARRS+
Sbjct: 43 MFARARQYIDGLELWKANGARRSSRGRDRDHKSPPSKKRCDDDRSSSRRADDDKSRSRRD 102
Query: 61 ---------------------------CAEDTDLEALFAAPEKLRRPSGKRDKRLYCQFH 120
EDTD+E LFA+PEKLRRPSGKR+KRLYC+FH
Sbjct: 103 ERVTSNRRGPKFDKFTPLNASIAEIYAVVEDTDMEVLFASPEKLRRPSGKRNKRLYCRFH 162
Query: 121 KDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSRERAEPKGSAREEKRERSPPPKRKEARP 180
KDHGHDTSRCFHLKEQ+++ IR GYLKKYVGSRE+AE +GSAREEKRERS PP+ KE RP
Sbjct: 163 KDHGHDTSRCFHLKEQVEDLIRIGYLKKYVGSREQAELEGSAREEKRERSQPPRPKEDRP 222
Query: 181 AVINTIHGGLSGGQSRQKRKALAREAANEVCTSYPKEPVMPILFGEQDGKGVHMPHNDAL 214
AVINTIHGG SG +S QKRKALARE A+EVCTSYPK PVMPILF EQDG+ VHMPHNDAL
Sbjct: 223 AVINTIHGGPSGEKSGQKRKALAREVAHEVCTSYPKWPVMPILFDEQDGERVHMPHNDAL 282
BLAST of Moc10g24180 vs. NCBI nr
Match:
XP_022158583.1 (uncharacterized protein LOC111025038 [Momordica charantia])
HSP 1 Score: 194.1 bits (492), Expect = 1.2e-45
Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = 0
Query: 27 EDTDLEALFAAPEKLRRPSGKRDKRLYCQFHKDHGHDTSRCFHLKEQIKNFIRRGYLKKY 86
E++ +E L PEKLR KR+K YC+FH+DHGH+TS C+ LK Q ++ I+ GY KK+
Sbjct: 158 EESGMEKLLKRPEKLRGEPEKRNKDKYCRFHRDHGHNTSNCWELKCQFEDLIQDGYFKKF 217
Query: 87 VGSRERAEPKGSAREEKRERSPPPKRKEARPAVINTIHGGLSGGQSRQKRKALAREAANE 146
VG + R+ E KR R+PP R++ RPAVINTI GG SGGQS KRK LAREA E
Sbjct: 218 VG-KPRSNSVEKKEERKRSRTPP--RRDDRPAVINTIFGGPSGGQSGNKRKELAREARRE 277
Query: 147 VCTSYPKEPVMPILFGEQDGKGVHMPHNDALVIAPQIDHVKVRRVLVDTEASTNILPFST 206
VC ++P I FG+ D +GVH+PHNDA VIAP IDHV VRRVLVD AS NIL T
Sbjct: 278 VCIIREQKPTCSITFGDADLEGVHLPHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPT 337
Query: 207 YTTLGW 213
Y LGW
Sbjct: 338 YLALGW 340
BLAST of Moc10g24180 vs. NCBI nr
Match:
XP_022152029.1 (uncharacterized protein LOC111019838 [Momordica charantia])
HSP 1 Score: 192.2 bits (487), Expect = 4.7e-45
Identity = 104/184 (56.52%), Postives = 125/184 (67.93%), Query Frame = 0
Query: 31 LEALFAAPEKLRRPSGKRDKRLYCQFHKDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSR 90
+E L PEKLR KR+K YC+FH+DHGH+TS C+ LK QI++ I+ GY KK+VG
Sbjct: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDHGHNTSSCWELKRQIEDLIQDGYFKKFVG-- 60
Query: 91 ERAEPKGSARE--EKRERSPPPKRKEARPAVINTIHGGLSGGQSRQKRKALAREAANEVC 150
+P+ ++ E E+R+RS P R+E RPAVINTI GG SGGQSR KR LAR A +VC
Sbjct: 61 ---KPRSNSVEKMEERKRSRTPSRREDRPAVINTIFGGPSGGQSRNKRNELARAARRKVC 120
Query: 151 TSYPKEPVMPILFGEQDGKGVHMPHNDALVIAPQIDHVKVRRVLVDTEASTNILPFSTYT 210
+ P PI F D + VH+PHNDALVIAP IDHV VRRVLVD AS NIL TY
Sbjct: 121 IIREQRPTFPITFDSADLEEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLLTYL 179
Query: 211 TLGW 213
TLGW
Sbjct: 181 TLGW 179
BLAST of Moc10g24180 vs. NCBI nr
Match:
XP_022143492.1 (uncharacterized protein LOC111013369 [Momordica charantia])
HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44
Identity = 103/182 (56.59%), Postives = 122/182 (67.03%), Query Frame = 0
Query: 31 LEALFAAPEKLRRPSGKRDKRLYCQFHKDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSR 90
+E L PEKL+ KR+K YC FH+DHGHDTS C+ LK QI++ I+ GY KK+VG +
Sbjct: 1 MEKLLKRPEKLQGDQEKRNKDKYCHFHRDHGHDTSNCWELKRQIEDLIQDGYFKKFVG-K 60
Query: 91 ERAEPKGSAREEKRERSPPPKRKEARPAVINTIHGGLSGGQSRQKRKALAREAANEVCTS 150
R E KR R PP R++ RPAVINTI GG SGGQS KRK LA EA +VC
Sbjct: 61 PRFNTVEKKEERKRSRMPP--RQDNRPAVINTIFGGPSGGQSGNKRKELALEARRQVCII 120
Query: 151 YPKEPVMPILFGEQDGKGVHMPHNDALVIAPQIDHVKVRRVLVDTEASTNILPFSTYTTL 210
++P I FG+ D +GVH+PHNDALVIAP ID+V VRRVLVD AS NIL STY L
Sbjct: 121 REQKPTCSITFGDADLEGVHLPHNDALVIAPLIDYVLVRRVLVDRGASANILSLSTYLAL 179
Query: 211 GW 213
GW
Sbjct: 181 GW 179
BLAST of Moc10g24180 vs. NCBI nr
Match:
XP_022149029.1 (uncharacterized protein LOC111017548 [Momordica charantia])
HSP 1 Score: 189.9 bits (481), Expect = 2.3e-44
Identity = 106/195 (54.36%), Postives = 119/195 (61.03%), Query Frame = 0
Query: 1 MLTRARQYIDGLELWKANGARRSN------------------------------------ 60
ML RARQYIDGLELWKA GARRS+
Sbjct: 123 MLARARQYIDGLELWKAKGARRSSRGKDRDQRSSPPKKRHSDDQSSSRQAVDDRSRGQCD 182
Query: 61 ---------------------------CAEDTDLEALFAAPEKLRRPSGKRDKRLYCQFH 120
E+TD++ALF AP+KL RPSGKRDKRLYC+FH
Sbjct: 183 ERGSSDRWGPKFDKFTPLNASVAEIYATVENTDMKALFTAPKKLHRPSGKRDKRLYCRFH 242
Query: 121 KDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSRERAEPKGSAREEKRERSPPPKRKEARP 133
KDHGH++SRCFHLKEQ+K+ IRRGYLKKYVGSRERA+P+GS REEKRERS PP RKE RP
Sbjct: 243 KDHGHNSSRCFHLKEQVKDLIRRGYLKKYVGSRERAKPEGSTREEKRERSQPPGRKEDRP 302
BLAST of Moc10g24180 vs. ExPASy TrEMBL
Match:
A0A6J1E0L8 (uncharacterized protein LOC111025310 OS=Momordica charantia OX=3673 GN=LOC111025310 PE=4 SV=1)
HSP 1 Score: 318.5 bits (815), Expect = 2.1e-83
Identity = 172/276 (62.32%), Postives = 187/276 (67.75%), Query Frame = 0
Query: 1 MLTRARQYIDGLELWKANGARRSN------------------------------------ 60
M RARQYIDGLELWKANGARRS+
Sbjct: 43 MFARARQYIDGLELWKANGARRSSRGRDRDHKSPPSKKRCDDDRSSSRRADDDKSRSRRD 102
Query: 61 ---------------------------CAEDTDLEALFAAPEKLRRPSGKRDKRLYCQFH 120
EDTD+E LFA+PEKLRRPSGKR+KRLYC+FH
Sbjct: 103 ERVTSNRRGPKFDKFTPLNASIAEIYAVVEDTDMEVLFASPEKLRRPSGKRNKRLYCRFH 162
Query: 121 KDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSRERAEPKGSAREEKRERSPPPKRKEARP 180
KDHGHDTSRCFHLKEQ+++ IR GYLKKYVGSRE+AE +GSAREEKRERS PP+ KE RP
Sbjct: 163 KDHGHDTSRCFHLKEQVEDLIRIGYLKKYVGSREQAELEGSAREEKRERSQPPRPKEDRP 222
Query: 181 AVINTIHGGLSGGQSRQKRKALAREAANEVCTSYPKEPVMPILFGEQDGKGVHMPHNDAL 214
AVINTIHGG SG +S QKRKALARE A+EVCTSYPK PVMPILF EQDG+ VHMPHNDAL
Sbjct: 223 AVINTIHGGPSGEKSGQKRKALAREVAHEVCTSYPKWPVMPILFDEQDGERVHMPHNDAL 282
BLAST of Moc10g24180 vs. ExPASy TrEMBL
Match:
A0A6J1DWH9 (uncharacterized protein LOC111025038 OS=Momordica charantia OX=3673 GN=LOC111025038 PE=4 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 5.9e-46
Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = 0
Query: 27 EDTDLEALFAAPEKLRRPSGKRDKRLYCQFHKDHGHDTSRCFHLKEQIKNFIRRGYLKKY 86
E++ +E L PEKLR KR+K YC+FH+DHGH+TS C+ LK Q ++ I+ GY KK+
Sbjct: 158 EESGMEKLLKRPEKLRGEPEKRNKDKYCRFHRDHGHNTSNCWELKCQFEDLIQDGYFKKF 217
Query: 87 VGSRERAEPKGSAREEKRERSPPPKRKEARPAVINTIHGGLSGGQSRQKRKALAREAANE 146
VG + R+ E KR R+PP R++ RPAVINTI GG SGGQS KRK LAREA E
Sbjct: 218 VG-KPRSNSVEKKEERKRSRTPP--RRDDRPAVINTIFGGPSGGQSGNKRKELAREARRE 277
Query: 147 VCTSYPKEPVMPILFGEQDGKGVHMPHNDALVIAPQIDHVKVRRVLVDTEASTNILPFST 206
VC ++P I FG+ D +GVH+PHNDA VIAP IDHV VRRVLVD AS NIL T
Sbjct: 278 VCIIREQKPTCSITFGDADLEGVHLPHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPT 337
Query: 207 YTTLGW 213
Y LGW
Sbjct: 338 YLALGW 340
BLAST of Moc10g24180 vs. ExPASy TrEMBL
Match:
A0A6J1DET8 (uncharacterized protein LOC111019838 OS=Momordica charantia OX=3673 GN=LOC111019838 PE=4 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 2.3e-45
Identity = 104/184 (56.52%), Postives = 125/184 (67.93%), Query Frame = 0
Query: 31 LEALFAAPEKLRRPSGKRDKRLYCQFHKDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSR 90
+E L PEKLR KR+K YC+FH+DHGH+TS C+ LK QI++ I+ GY KK+VG
Sbjct: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDHGHNTSSCWELKRQIEDLIQDGYFKKFVG-- 60
Query: 91 ERAEPKGSARE--EKRERSPPPKRKEARPAVINTIHGGLSGGQSRQKRKALAREAANEVC 150
+P+ ++ E E+R+RS P R+E RPAVINTI GG SGGQSR KR LAR A +VC
Sbjct: 61 ---KPRSNSVEKMEERKRSRTPSRREDRPAVINTIFGGPSGGQSRNKRNELARAARRKVC 120
Query: 151 TSYPKEPVMPILFGEQDGKGVHMPHNDALVIAPQIDHVKVRRVLVDTEASTNILPFSTYT 210
+ P PI F D + VH+PHNDALVIAP IDHV VRRVLVD AS NIL TY
Sbjct: 121 IIREQRPTFPITFDSADLEEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLLTYL 179
Query: 211 TLGW 213
TLGW
Sbjct: 181 TLGW 179
BLAST of Moc10g24180 vs. ExPASy TrEMBL
Match:
A0A6J1CQZ2 (uncharacterized protein LOC111013369 OS=Momordica charantia OX=3673 GN=LOC111013369 PE=4 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 6.6e-45
Identity = 103/182 (56.59%), Postives = 122/182 (67.03%), Query Frame = 0
Query: 31 LEALFAAPEKLRRPSGKRDKRLYCQFHKDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSR 90
+E L PEKL+ KR+K YC FH+DHGHDTS C+ LK QI++ I+ GY KK+VG +
Sbjct: 1 MEKLLKRPEKLQGDQEKRNKDKYCHFHRDHGHDTSNCWELKRQIEDLIQDGYFKKFVG-K 60
Query: 91 ERAEPKGSAREEKRERSPPPKRKEARPAVINTIHGGLSGGQSRQKRKALAREAANEVCTS 150
R E KR R PP R++ RPAVINTI GG SGGQS KRK LA EA +VC
Sbjct: 61 PRFNTVEKKEERKRSRMPP--RQDNRPAVINTIFGGPSGGQSGNKRKELALEARRQVCII 120
Query: 151 YPKEPVMPILFGEQDGKGVHMPHNDALVIAPQIDHVKVRRVLVDTEASTNILPFSTYTTL 210
++P I FG+ D +GVH+PHNDALVIAP ID+V VRRVLVD AS NIL STY L
Sbjct: 121 REQKPTCSITFGDADLEGVHLPHNDALVIAPLIDYVLVRRVLVDRGASANILSLSTYLAL 179
Query: 211 GW 213
GW
Sbjct: 181 GW 179
BLAST of Moc10g24180 vs. ExPASy TrEMBL
Match:
A0A6J1D5T3 (uncharacterized protein LOC111017548 OS=Momordica charantia OX=3673 GN=LOC111017548 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 106/195 (54.36%), Postives = 119/195 (61.03%), Query Frame = 0
Query: 1 MLTRARQYIDGLELWKANGARRSN------------------------------------ 60
ML RARQYIDGLELWKA GARRS+
Sbjct: 123 MLARARQYIDGLELWKAKGARRSSRGKDRDQRSSPPKKRHSDDQSSSRQAVDDRSRGQCD 182
Query: 61 ---------------------------CAEDTDLEALFAAPEKLRRPSGKRDKRLYCQFH 120
E+TD++ALF AP+KL RPSGKRDKRLYC+FH
Sbjct: 183 ERGSSDRWGPKFDKFTPLNASVAEIYATVENTDMKALFTAPKKLHRPSGKRDKRLYCRFH 242
Query: 121 KDHGHDTSRCFHLKEQIKNFIRRGYLKKYVGSRERAEPKGSAREEKRERSPPPKRKEARP 133
KDHGH++SRCFHLKEQ+K+ IRRGYLKKYVGSRERA+P+GS REEKRERS PP RKE RP
Sbjct: 243 KDHGHNSSRCFHLKEQVKDLIRRGYLKKYVGSRERAKPEGSTREEKRERSQPPGRKEDRP 302
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E0L8 | 2.1e-83 | 62.32 | uncharacterized protein LOC111025310 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DWH9 | 5.9e-46 | 55.91 | uncharacterized protein LOC111025038 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DET8 | 2.3e-45 | 56.52 | uncharacterized protein LOC111019838 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A6J1CQZ2 | 6.6e-45 | 56.59 | uncharacterized protein LOC111013369 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A6J1D5T3 | 1.1e-44 | 54.36 | uncharacterized protein LOC111017548 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
Match Name | E-value | Identity | Description | |