Moc10g15700 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g15700
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr10: 11942323 .. 11942994 (+)
RNA-Seq Expression	Moc10g15700
Synteny	Moc10g15700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTCGGCCGAAATGACTGCACAGTTATTTTTCAGGAATGTTGTGAAACTATGGGGTGTTCCTGAGAGCATCGTGAGCGATAGAGACCGACGCTTCACAGGGACATTCTGGACAGAACTTTTCCGCCTATTGGGATCCAATTTGAACATCTCTTCGAGTTATCACCCACAGACAGACGGACAGACGAAACGCTTCAACAGTATGCTAGAAGAGTACCTCCGCCACTTTATTGATGCTCGGCAAAAGAACTGGATCCAGATGCTCGATGTAGCCCAATTCTGTTTCAATTGCCAAAAGAGCACCACCACGGGAAAAACCCTTTTCGAAATCGTGTGCGGGCGACAACCGGTGTTACCTCATATTGTCGACCATCCTTATGTGGGTAAGAGCCCTCAAGCCTACAATTTCACCAAGGAATGGCGTCAATCCACCGAAGTGGCCCGAGCATAACTAGAAAAGGCGTCTAAACACATGAAAAGGTGGGCAGACAAAAAGCGAAGACCATTAGAATTCCAGGCAGGAGATCAAGTCCTTGTGAAGCTGAGACCTGAACAGCTTCGTTTCCGAGGTAACAAAGACCAACGCCTTGTGCGAAAATATGAAGGACCCGTCAACGTTCTTCAGAAGGTGGGCAAGACATCCTATAGGGTTAACTACCCCCGTGGATGA

mRNA sequence

ATGTGTTCGGCCGAAATGACTGCACAGTTATTTTTCAGGAATGTTGTGAAACTATGGGGTGTTCCTGAGAGCATCGTGAGCGATAGAGACCGACGCTTCACAGGGACATTCTGGACAGAACTTTTCCGCCTATTGGGATCCAATTTGAACATCTCTTCGAGTTATCACCCACAGACAGACGGACAGACGAAACGCTTCAACAGTATGCTAGAAGAGTACCTCCGCCACTTTATTGATGCTCGGCAAAAGAACTGGATCCAGATGCTCGATGTAGCCCAATTCTGTTTCAATTGCCAAAAGAGCACCACCACGGGAAAAACCCTTTTCGAAATCGTGTGCGGGCGACAACCGGTGTTACCTCATATTGTCGACCATCCTTATGTGGACAAAAAGCGAAGACCATTAGAATTCCAGGCAGGAGATCAAGTCCTTGTGAAGCTGAGACCTGAACAGCTTCGTTTCCGAGGTAACAAAGACCAACGCCTTGTGCGAAAATATGAAGGACCCGTCAACGTTCTTCAGAAGGTGGGCAAGACATCCTATAGGGTTAACTACCCCCGTGGATGA

Coding sequence (CDS)

ATGTGTTCGGCCGAAATGACTGCACAGTTATTTTTCAGGAATGTTGTGAAACTATGGGGTGTTCCTGAGAGCATCGTGAGCGATAGAGACCGACGCTTCACAGGGACATTCTGGACAGAACTTTTCCGCCTATTGGGATCCAATTTGAACATCTCTTCGAGTTATCACCCACAGACAGACGGACAGACGAAACGCTTCAACAGTATGCTAGAAGAGTACCTCCGCCACTTTATTGATGCTCGGCAAAAGAACTGGATCCAGATGCTCGATGTAGCCCAATTCTGTTTCAATTGCCAAAAGAGCACCACCACGGGAAAAACCCTTTTCGAAATCGTGTGCGGGCGACAACCGGTGTTACCTCATATTGTCGACCATCCTTATGTGGACAAAAAGCGAAGACCATTAGAATTCCAGGCAGGAGATCAAGTCCTTGTGAAGCTGAGACCTGAACAGCTTCGTTTCCGAGGTAACAAAGACCAACGCCTTGTGCGAAAATATGAAGGACCCGTCAACGTTCTTCAGAAGGTGGGCAAGACATCCTATAGGGTTAACTACCCCCGTGGATGA

Protein sequence

MCSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDGQTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPHIVDHPYVDKKRRPLEFQAGDQVLVKLRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYPRG

Homology

[Close]

BLAST of Moc10g15700 vs. NCBI nr
Match: KAA0062556.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 4.3e-79
Identity = 149/220 (67.73%), Postives = 170/220 (77.27%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1206 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1265

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1266 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1325

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            ++DHP+                                   VDKKRRPLEF+AGDQVL+K
Sbjct: 1326 LIDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWVDKKRRPLEFRAGDQVLIK 1385

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1386 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1425

[Close]

BLAST of Moc10g15700 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 9.6e-79
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1258 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1317

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1318 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1377

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            +VDHP+                                    DKKRRPLEF+AGDQVL+K
Sbjct: 1378 LVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIK 1437

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1438 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1477

[Close]

BLAST of Moc10g15700 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 9.6e-79
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1262 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1321

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1322 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1381

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            +VDHP+                                    DKKRRPLEF+AGDQVL+K
Sbjct: 1382 LVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIK 1441

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1442 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1481

[Close]

BLAST of Moc10g15700 vs. NCBI nr
Match: KAA0063412.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 9.6e-79
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1262 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1321

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1322 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1381

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            +VDHP+                                    DKKRRPLEF+AGDQVL+K
Sbjct: 1382 LVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIK 1441

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1442 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1481

[Close]

BLAST of Moc10g15700 vs. NCBI nr
Match: KAA0032849.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 9.6e-79
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1262 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1321

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1322 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1381

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            +VDHP+                                    DKKRRPLEF+AGDQVL+K
Sbjct: 1382 LVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIK 1441

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1442 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1481

[Close]

BLAST of Moc10g15700 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.8e-18
Identity = 63/217 (29.03%), Postives = 91/217 (41.94%), Query Frame = 0


Query: 3    SAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDGQ 62
            +AE TA++F + V+  +G P+ I++D D  FT   W +        +  S  Y PQTDGQ
Sbjct: 1025 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1084

Query: 63   TKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLP-- 122
            T+R N  +E+ LR         W+  + + Q  +N    + T  T FEIV    P L   
Sbjct: 1085 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL 1144

Query: 123  ------------------------------HIVDHPYVDKKRRPL-EFQAGDQVLVKLRP 182
                                          +I    Y D K + + EFQ GD V+VK   
Sbjct: 1145 ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK 1204

Query: 183  EQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
                 + NK   L   + GP  VLQK G  +Y ++ P
Sbjct: 1205 TGFLHKSNK---LAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Moc10g15700 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.8e-18
Identity = 63/217 (29.03%), Postives = 91/217 (41.94%), Query Frame = 0


Query: 3    SAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDGQ 62
            +AE TA++F + V+  +G P+ I++D D  FT   W +        +  S  Y PQTDGQ
Sbjct: 1025 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1084

Query: 63   TKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLP-- 122
            T+R N  +E+ LR         W+  + + Q  +N    + T  T FEIV    P L   
Sbjct: 1085 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL 1144

Query: 123  ------------------------------HIVDHPYVDKKRRPL-EFQAGDQVLVKLRP 182
                                          +I    Y D K + + EFQ GD V+VK   
Sbjct: 1145 ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK 1204

Query: 183  EQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
                 + NK   L   + GP  VLQK G  +Y ++ P
Sbjct: 1205 TGFLHKSNK---LAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Moc10g15700 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.8e-18
Identity = 63/217 (29.03%), Postives = 91/217 (41.94%), Query Frame = 0


Query: 3    SAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDGQ 62
            +AE TA++F + V+  +G P+ I++D D  FT   W +        +  S  Y PQTDGQ
Sbjct: 1025 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1084

Query: 63   TKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLP-- 122
            T+R N  +E+ LR         W+  + + Q  +N    + T  T FEIV    P L   
Sbjct: 1085 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL 1144

Query: 123  ------------------------------HIVDHPYVDKKRRPL-EFQAGDQVLVKLRP 182
                                          +I    Y D K + + EFQ GD V+VK   
Sbjct: 1145 ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK 1204

Query: 183  EQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
                 + NK   L   + GP  VLQK G  +Y ++ P
Sbjct: 1205 TGFLHKSNK---LAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Moc10g15700 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.8e-18
Identity = 63/217 (29.03%), Postives = 91/217 (41.94%), Query Frame = 0


Query: 3    SAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDGQ 62
            +AE TA++F + V+  +G P+ I++D D  FT   W +        +  S  Y PQTDGQ
Sbjct: 1025 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1084

Query: 63   TKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLP-- 122
            T+R N  +E+ LR         W+  + + Q  +N    + T  T FEIV    P L   
Sbjct: 1085 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL 1144

Query: 123  ------------------------------HIVDHPYVDKKRRPL-EFQAGDQVLVKLRP 182
                                          +I    Y D K + + EFQ GD V+VK   
Sbjct: 1145 ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK 1204

Query: 183  EQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
                 + NK   L   + GP  VLQK G  +Y ++ P
Sbjct: 1205 TGFLHKSNK---LAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Moc10g15700 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.8e-18
Identity = 63/217 (29.03%), Postives = 91/217 (41.94%), Query Frame = 0


Query: 3    SAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDGQ 62
            +AE TA++F + V+  +G P+ I++D D  FT   W +        +  S  Y PQTDGQ
Sbjct: 1025 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1084

Query: 63   TKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLP-- 122
            T+R N  +E+ LR         W+  + + Q  +N    + T  T FEIV    P L   
Sbjct: 1085 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL 1144

Query: 123  ------------------------------HIVDHPYVDKKRRPL-EFQAGDQVLVKLRP 182
                                          +I    Y D K + + EFQ GD V+VK   
Sbjct: 1145 ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK 1204

Query: 183  EQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
                 + NK   L   + GP  VLQK G  +Y ++ P
Sbjct: 1205 TGFLHKSNK---LAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Moc10g15700 vs. ExPASy TrEMBL
Match: A0A5A7V814 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00400 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.1e-79
Identity = 149/220 (67.73%), Postives = 170/220 (77.27%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1206 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1265

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1266 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1325

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            ++DHP+                                   VDKKRRPLEF+AGDQVL+K
Sbjct: 1326 LIDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWVDKKRRPLEFRAGDQVLIK 1385

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1386 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1425

[Close]

BLAST of Moc10g15700 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.6e-79
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1262 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1321

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1322 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1381

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            +VDHP+                                    DKKRRPLEF+AGDQVL+K
Sbjct: 1382 LVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIK 1441

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1442 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1481

[Close]

BLAST of Moc10g15700 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.6e-79
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1262 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1321

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1322 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1381

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            +VDHP+                                    DKKRRPLEF+AGDQVL+K
Sbjct: 1382 LVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIK 1441

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1442 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1481

[Close]

BLAST of Moc10g15700 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.6e-79
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1262 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1321

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1322 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1381

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            +VDHP+                                    DKKRRPLEF+AGDQVL+K
Sbjct: 1382 LVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIK 1441

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1442 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1481

[Close]

BLAST of Moc10g15700 vs. ExPASy TrEMBL
Match: A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.6e-79
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 2    CSAEMTAQLFFRNVVKLWGVPESIVSDRDRRFTGTFWTELFRLLGSNLNISSSYHPQTDG 61
            CSAE TAQLFF++VVKLWGVP SIVSDRD RF G+FWTELF  LG++LNISSSYHPQTDG
Sbjct: 1262 CSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDG 1321

Query: 62   QTKRFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTGKTLFEIVCGRQPVLPH 121
            QT+RFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++TG++ FEIV GRQPVLPH
Sbjct: 1322 QTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPH 1381

Query: 122  IVDHPY-----------------------------------VDKKRRPLEFQAGDQVLVK 181
            +VDHP+                                    DKKRRPLEF+AGDQVL+K
Sbjct: 1382 LVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIK 1441

Query: 182  LRPEQLRFRGNKDQRLVRKYEGPVNVLQKVGKTSYRVNYP 187
            LRPEQ+RFRG KDQRLVRKYEGPV VL+KVG TSYRV  P
Sbjct: 1442 LRPEQVRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALP 1481

The following BLAST results are available for this feature:

BLAST of Moc10g15700 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062556.1	4.3e-79	67.73	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	9.6e-79	67.73	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	9.6e-79	67.73	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]
KAA0063412.1	9.6e-79	67.73	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0032849.1	9.6e-79	67.73	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Moc10g15700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	9.8e-18	29.03	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	9.8e-18	29.03	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	9.8e-18	29.03	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	9.8e-18	29.03	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	9.8e-18	29.03	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Moc10g15700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V814	2.1e-79	67.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79...	[more]
A0A5D3C4R1	4.6e-79	67.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	4.6e-79	67.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UXR6	4.6e-79	67.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]
A0A5A7T0E2	4.6e-79	67.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]

BLAST of Moc10g15700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..143 e-value: 1.4E-29 score: 104.8
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 3..140
None	No IPR available	PANTHER	PTHR46148:SF35	ZINC FINGER, CCHC-TYPE-RELATED	coord: 3..140
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..116 score: 13.575397
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g15700.1	Moc10g15700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity