Moc10g15450 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g15450
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr10: 11723662 .. 11729699 (+)
RNA-Seq Expression	Moc10g15450
Synteny	Moc10g15450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAACCACATATGTTCTGTAGGCTACCCAAATAATGCAACATTCCTCTCTGATTTTGAAAGTATGAATAAATGTAAGATTGTTTTGAATGTTTGAATGATTTAGTTATTTGAAAGTTTGAAAGTTGTACCAAATGTTGTAGAAGGAATTTTGAAAGTTTTGATTGAAAGAAAGTTTGTTTGGAAGGATTTGAAGTTTGATCAAATGAAAGTTCGTTTTGAATGAACGAAAGTTTGTTTTGAAAGAATGAAAGTTTGTTTTGACTGATTGGAAATTTTACCTTATTTGAAGACTTTTTCCTGAAAATCTAGTTTATTTTGAGAGTTTTGAAAATTGTATTAAATATTTTAAAGGACTTTATAAGTTTCGATCTGTTCGTATTTTTGTTTACGAATGTTAGGAAAATGAACTTCGAAATTCGATATGGAAATTGCTTATTAGTATTTTTGTACTCATTTTTTGTGTTTCAAAGTTGGATTTGTCCTTATCTTTTGTCATAGTATCAAATTAAATAAAGAAGTTTTTTCATTAATTTAGTGTTTATTTGTTTACGCTTCTGCATTTTGTCAGAATGATCATATTAGAAAATACGGGTTGTTACAAGAGATCTAGGATGAGAGACCAAGATAACACCCCAATTGACCGGTATAAGAAACGTTGAGCTCCATCTTCACGAGGTCAATTATTCCAGCTTTAGTGTTTTACTGACCATGAACTGGGACTTGTCATAATTTATTGTTTGAGCTTAAGCACGTTCATAATCATTGAGAATCTGCTTTATAGCACGACAGTATAGTCTTATCGCTTTAAAAAATATGAGGCTATCATCTGCAAAAAAAAAAAAAAAAGTCTTTTATGATCTTCCCGGGAAGAGCAAACAAGCCTTCCGCACGTAAAATAAAAAGATAAGGGGATAGTGGATCTCCCTGTCGGAGCCCTCGATTGGGTCGGAAGCTTTGACCAGGCTCTCCATTTATGAGAATTGAGAAGTTAACTGATTCAACACAACTCATGATTAGGGAAATCCACCGCTCTGCAAAACCCAAAGTTGCCATTGTACATCTAAAAAATGTCCATTCCACTCGGTCGTAAGCTTTAGACATATCGAGCTTTAAGGCGACAAGGCCATCCTTCCCGTGTCTTTTGTTGTTCAAAGAGTGGATGCACTCGAATCCTACAACTGCATTGTCGGTGACGAGTCTTCCAGGGACAAAAGTTGATTGGGTCGGGGAAATAATCTCACCTAAGACTTTTTTCATTCTGTTGACCAGAGTTTTAGCAATCAGCTTGTAGACGACATTGTAAAGGGTGATGGGTTTGAATTCCATCACAGTTTTAGGATCCTTGACCTTTGAAATAAGGACAATATAGGTTTTGTTCAGATGATCTACCAATCTGTTGTCGTTAACGAAATTAAGACCAATCCTGATCCTATCTTCGCCAATAATGTCTCAGTACTTCTAATAAAATATGGCTTGAGCCCCGTGGGCCGGGGCCTTTGTTGGATGCATTTCTTTTAGGGGCAAGTAGAAGAATGATTATATTAAATAGTGTGACTTGAAAAATAGCCAAAAGTATCCAATATCATAAAAATGGCTACCAGGTAGTTATAGTTCAATCTAGAATTTAATATAGATAAAAATACCCCCACCAAAATAGCTAAATTATATCATACCATTACCCCTTAAATTTGTGGCAAAAATACCCTTGAAATAACTTTTTTGCTACAGCTTGATTTTATGAAATAAAATAGTGAATCAAAATTTCAAAAATAAATCTAGATTTAGAAATTTCAAAATTTTAAAAATAAAATTGGTTAAATGAATACTTTGAAATAAAAAAAAGATTAAAATGCAGAAAAATATGAAAAATGACCTCATGAAACGTAAGTAAGTGGAAAATGAGTAGGAAAAATAAGATTGAAAAATCAAATACTGTTTTTAAAACTATGGAGGGGTAGCTGCATTGGAAGATACGATAATTACTACCAAACTCACGAACCGTCTCCTTCTTCCCAAAAACCGTAATCGATCAAAAAGAACCTATAAAAAAAGTTACAAATAAAGGTAAGGACAAACTAGAAACGTGGTGAAGCACCTGGATATTTTCTTATTCATATGTCATATATAATAATACTTACGTAGTACTGAAAGTAGTTTACTTACACTATAATGAGCTGTTGGAATTAATTTAATTAATTCCATTAAATGGGTAACAATTTATGATAAATTATATGTACTACTATTCATGGGAAAAATAAGTGGTCTAATTAGGGTCCATAAACTTTCTATATATGGTGTGGCCAGCTGGGCAGATACCAGCCCGTTGATCCTAAGGGATTATGGGAAACCCTAGAATCAACTTATAAATATAGGGTTATGGTCCCCCGTTATACTATGCTCCTTTATTCTCATATTCTCCATCTAATAGAGAGTATTGTTCATCTTTGGTCTAAGGCTGCATAGTTGAGGAAGACCCAAACCACGCAGATATTTCTACATGAATTTGGAATCTCTACTTATAGTTATAGTTCTTTAGCCTACTCCCATGCATAGATCCTATATTAAAGTTTTTGTTTCTAACAAGTGGTATCAGAGCAAGTTTTGCATGGTTGTTTACTAAATATTTAATTGTTGTTTATGAATAAATTTGTTGGTTGTTTCCTTAGTCAAATTTATTATGAAACAGCATGAAATCTGAATTATTAGAACTATTTGGATTGATTCGACAATTTTGAATTATTTAATTTGAAAATTGTTTGAATTGATTGTCGATTGATTTGATAAAGGTTAATATAACGTTCTTCCTAATTTTATCAAATCGATCATACTAGAATCAAATTAGTTAGTGTTTAAAAAAAATTAAAGTTGCGTGAAGTGCCGCATATGAGAATTTGCGATTCATTATTAAAAAAAAAAAGAATAAATAAATAAAGCTCCGCATAAGGCTATTGTGCTAGGTAAAACCGTAGTACATAAAGATAAATTGTTGCAGTGGGCAAGTTATTTTTATTTATTTTGTAATTTAATTTTTGATAAGTATTTTATATATTTATAATCTGTTATAAATATTTTGGGCATAAAAGGTAGGGAGAACTGTTTATTTTTCCCTTTTAAATTGTGCTAATTAAGGTTGACTGCCATGGTCAATAAATTTATATTTCATTTATTGGTAGCACAATTTATCTAATTTTTTTGAATGTTTTGATGCGTGAAATACGCTACCAAAGTAGTCTCTATTTTATAAATTGGAACATTTAAAGTTCTTAGATGTAGTGTATTTGTTGCTTATGCGGATTGTGATTGGCCCAAAGGAAGGTTGCAATTTAGCCAAACAACAAACACACATGCAATAATAAATATGGATAACATAAGGTTGTGTCCTTGAAGTTGTTAGTTAGCCCAAAGGAATGCTATCATACAAAAGGAATGAGTTATTAATGTTTTATTATTGTACTGAGAGTATCACTAGCAAATTAACATTTTTTGTCCAAAGACTGAATGTAAATATTGCATTAGGTATCTCATTTGTCCTCATAAAGTTTATTTAGAATGTCATGAATATTTATATATATCTATGTGACATTACTTACTATATTGAGCTTGTGTTCTTTATACAGTTAAGTTTGGTAATTCTGATAATATGTCCACTCAAGTCAACATTCCTACACTGAATGGGGCTAATTTTAAGGACTGGAAAGAAGACATCCAGATAGTACTTGGGTGTATGGATTTAGACCTTGCATTAATGGTAGACTGTCCTACTTCAACTGAGGAAAATCCTAATAAGGTTGAATTGAGAAGTGGGATAGGTCTAATCGCATGTGTGTAATGATCATGAAGCGCTCAATTCCAGAAACGTTTAGAGGCTCTATTGTTGAGGGAACGAATGCCAAAGATTTTCTAAAGGAAATGGAGTAGTACTTTACAAAAAACGATAAGGCAGAGGCGGGTACCCTTATGACAAAACTCATCTCTTCAAGATACGTTGGTAAAGGAAACATCAAGGAATACATAATGCAAACGTCAAATGTTGCAACAAAACTTAAAGCACTGAAGTTGGAAGTTTCGGAAGACTTTTTAGTGCATTTGGTTTTGAACTCTCTTCCAGCAGAGTATAGCCACTTCAGGGTGAGTTACAATACTCAGAAGGACAAATGGTCCCTGAATGAGTTAATCTCTCATTGTGTTCAAGAGGAAGAGGGGATGCAGTGAGAGAAGACAGAAAGTGTTCACATGGCTTCCACCTCAAAGAGTGTAAAGAGAAAGAGAATGAATGATGCTGCAGAATCTTATAAGTAGAAAAAGGAAAAGAGGACCCGCTTGTTTCTTCTGCAAGAAGACTGGGCACATGAAAAAGCAATGTGCCAAATATTCTGCTTGGTTATTGAAGAAGGATATGTTTCTCTCCCTTTTTTGTTCTTAGATTAATCTAGCTTCTGTACCTATGCATACGTGGTGGGTAGATTCAGGTGCTTCTACTCACATAAGTAAATCTATGCAGGGTTGCATTTGGAGCCGACCGCCAAGTGATGCTGAGGCTTTCATCTACGTGGCTGACGACAATAGGGCAAAAGTAGAAGCAATAGGAACATTTATATTACTTTAGGAACTGGTTTTCATTTGGATTTGTTCGAGACTTTTGTTGTTCCGTCATTTAGACGGAATTTAATTTCTATTTCTTCATTGGACAAATTTGATTATTATTGTTCATTTAGAAATAAAAAGCTAAGTCTTTTGCATAATTCAAATGTTATTGATACTGGTTCATTGATTGATAAATTTATATATGCTTGATAATGTTCCTTTTGATAATGAAATCTTGCATGTTTCATCACGCGGTACAAAGCGAAAATTAAATGAAAATTCTGATACATTATGACACAAACGATTAGGACATATCTCTAACACTAGAATTAAAAGACTCGTGGATGAAAGAATTCTTGATTCACTTGACCTAACAGATCTTTAGGTTTGTGTTAATTGTATCAAAGGAAAAGAATCAAACAAGAGAAATATAGGTGTTGAAAGAGCGAAGTCCTAGAACTGATACATACTGACATATGTGGACCATTCAATACCGCTTCATGGAATGGACAACAGTATTTTATCACATTCATCGGCGACTATTCAAGATACTGCTAAATATATTTAATTGATGAGAAATCTCAAGCTCTGGACATGTTCAAATTTTTTAAAGTAAAAGTTGAACTTCAACTTGACTGGAAAATTAAAACCATCAGATCTGACCGTGGAGGAGAATATTATGGTCGATATGATGGATCAGGTGAACAACGTCCAAGACCCTTTGTGCTTTTCCATGAACAATGTGGCATAGTTCCTCAGTACATGATGCCTGGGAAACCTGGCATGAATGGAGTTGCTGAGAGGCGAAATAGGACTCTTAAAGATATGGTAAGAATTATGATTGCTCATTCTTCTTTGCTAGAGTCTCTTTGGGGAGAAGCATTAAAAACTATAGTATACATACTTAACAGAGTGCCTAGCAAAGCAGTAAATAAAACCTCATATGAGCTGTGGATAGGAAAAAGACCCAGCCTAAGGCATTTACACATTTGGGGATGTCCAGTGGAAGTAAGGCCTTATAGGCCAAATGAAAAGAAACTAGACTCAAGAACCATAAGTTGCTACTTTGTTGGGTATGCTGAGCGCTCTCGGGGCTTCAAGTTCTATAATCCCACTTCAGGAAATTTTTTCAAGACAGGAAATGCTCGATTTCTTGAGAATATTGAGTTTGAGGGGAGAAATAAAAGTAGAGATATTGTCTTTAAAGAAGAAAATGCTACTATTAGGAATGACGTGGTTACCTTACCTACCATTGTTAGTAAAGTAATTTTAGATAATGACACTCAAGATGAAGTTCCAACACTTGATGTCATTACCTTTCAAGACAACACTAAGGACACATCACTCTACCCTATAGATCAACCTCAACATACTCAAGAAGTGTCATTAAGAAGATCCACTAGAGAAAGAGGAAGTGCAATACTGGACGATTATATTGTATTTCTTTAA

mRNA sequence

ATGGGTAACCACATATGTTCTGTAGGCTACCCAAATAATGCAACATTCCTCTCTGATTTTGAAATTAAGTTTGGTAATTCTGATAATATGTCCACTCAAGTCAACATTCCTACACTGAATGGGGCTAATTTTAAGGACTGGAAAGAAGACATCCAGATAGTACTTGGGTGTATGGATTTAGACCTTGCATTAATGGTAGACTGTCCTACTTCAACTGAGGAAAATCCTAATAAGGTTGAATTGAGAAGTGGGATAGAGGCGGGTACCCTTATGACAAAACTCATCTCTTCAAGATACGTTGGTAAAGGAAACATCAAGGAATACATAATGCAAACGTCAAATGTTGCAACAAAACTTAAAGCACTGAAGTTGGAAGTTTCGGAAGACTTTTTAGTGCATTTGGTTTTGAACTCTCTTCCAGCAGAGTATAGCCACTTCAGGGTGAGTTACAATACTCAGAAGGACAAATGGTCCCTGAATGAGTTAATCTCTCATTGTGTTCAAGAGGAAGAGGGGATGCAGCCAAATGAAAAGAAACTAGACTCAAGAACCATAAGTTGCTACTTTGTTGGGTATGCTGAGCGCTCTCGGGGCTTCAAGTTCTATAATCCCACTTCAGGAAATTTTTTCAAGACAGGAAATGCTCGATTTCTTGAGAATATTGAGTTTGAGGGGAGAAATAAAAGTAGAGATATTGTCTTTAAAGAAGAAAATGCTACTATTAGGAATGACGTGGTTACCTTACCTACCATTGTTAGTAAAGTAATTTTAGATAATGACACTCAAGATGAAGTTCCAACACTTGATGTCATTACCTTTCAAGACAACACTAAGGACACATCACTCTACCCTATAGATCAACCTCAACATACTCAAGAAGTGTCATTAAGAAGATCCACTAGAGAAAGAGGAAGTGCAATACTGGACGATTATATTGTATTTCTTTAA

Coding sequence (CDS)

ATGGGTAACCACATATGTTCTGTAGGCTACCCAAATAATGCAACATTCCTCTCTGATTTTGAAATTAAGTTTGGTAATTCTGATAATATGTCCACTCAAGTCAACATTCCTACACTGAATGGGGCTAATTTTAAGGACTGGAAAGAAGACATCCAGATAGTACTTGGGTGTATGGATTTAGACCTTGCATTAATGGTAGACTGTCCTACTTCAACTGAGGAAAATCCTAATAAGGTTGAATTGAGAAGTGGGATAGAGGCGGGTACCCTTATGACAAAACTCATCTCTTCAAGATACGTTGGTAAAGGAAACATCAAGGAATACATAATGCAAACGTCAAATGTTGCAACAAAACTTAAAGCACTGAAGTTGGAAGTTTCGGAAGACTTTTTAGTGCATTTGGTTTTGAACTCTCTTCCAGCAGAGTATAGCCACTTCAGGGTGAGTTACAATACTCAGAAGGACAAATGGTCCCTGAATGAGTTAATCTCTCATTGTGTTCAAGAGGAAGAGGGGATGCAGCCAAATGAAAAGAAACTAGACTCAAGAACCATAAGTTGCTACTTTGTTGGGTATGCTGAGCGCTCTCGGGGCTTCAAGTTCTATAATCCCACTTCAGGAAATTTTTTCAAGACAGGAAATGCTCGATTTCTTGAGAATATTGAGTTTGAGGGGAGAAATAAAAGTAGAGATATTGTCTTTAAAGAAGAAAATGCTACTATTAGGAATGACGTGGTTACCTTACCTACCATTGTTAGTAAAGTAATTTTAGATAATGACACTCAAGATGAAGTTCCAACACTTGATGTCATTACCTTTCAAGACAACACTAAGGACACATCACTCTACCCTATAGATCAACCTCAACATACTCAAGAAGTGTCATTAAGAAGATCCACTAGAGAAAGAGGAAGTGCAATACTGGACGATTATATTGTATTTCTTTAA

Protein sequence

MGNHICSVGYPNNATFLSDFEIKFGNSDNMSTQVNIPTLNGANFKDWKEDIQIVLGCMDLDLALMVDCPTSTEENPNKVELRSGIEAGTLMTKLISSRYVGKGNIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEEGMQPNEKKLDSRTISCYFVGYAERSRGFKFYNPTSGNFFKTGNARFLENIEFEGRNKSRDIVFKEENATIRNDVVTLPTIVSKVILDNDTQDEVPTLDVITFQDNTKDTSLYPIDQPQHTQEVSLRRSTRERGSAILDDYIVFL

Homology

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BLAST of Moc10g15450 vs. NCBI nr
Match: KYP41105.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 233.4 bits (594), Expect = 2.7e-57
Identity = 157/420 (37.38%), Postives = 195/420 (46.43%), Query Frame = 0


Query: 39  LNGANFKDWKEDIQIVLGCMDLDLALMVDCPTSTEEN--PNKVE---------------- 98
           LNG NFK WKE ++I++GCMDLDLA  V+ PT T EN   +KVE                
Sbjct: 2   LNGTNFKAWKEAVEIIIGCMDLDLAFRVEKPTPTPENLDEDKVEKWERSNRMCLMIMKRS 61

Query: 99  ---------------------------LRSGIEAGTLMTKLISSRYVGKGNIKEYIMQTS 158
                                           +A  L  KLIS RY GKGNI++YIM+ S
Sbjct: 62  VPEVFQGSISESQNDKGFLDAVEHYFTSNEKADARRLFAKLISMRYKGKGNIRDYIMEMS 121

Query: 159 NVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEEGM 218
           N+A+KLKALKLE+S+D LVHL L SLP ++  F+VSYNTQKDKW+LNELISH VQEEE  
Sbjct: 122 NLASKLKALKLELSDDLLVHLFLISLPTQFGQFKVSYNTQKDKWTLNELISHYVQEEERQ 181

Query: 219 Q----------------------------------------------------------- 278
           Q                                                           
Sbjct: 182 QREKTELALFLRECGIAPQYTMPGKPSMNGVAERRNRTLKDMVRSMISHSSLPESLWGEA 241

Query: 279 -----------------------------------------------PNEKKLDSRTISC 308
                                                          P+E KL+SRT+SC
Sbjct: 242 LKTAVYILNRVPSKAVNKTPYELWTGKRPSLKHLHIWGCPAEARPYRPHESKLESRTVSC 301

[Close]

BLAST of Moc10g15450 vs. NCBI nr
Match: XP_022155096.1 (uncharacterized protein LOC111022228 [Momordica charantia])

HSP 1 Score: 214.9 bits (546), Expect = 9.8e-52
Identity = 123/185 (66.49%), Postives = 128/185 (69.19%), Query Frame = 0


Query: 30  MSTQV-NIPTLNGANFKDWKEDIQIVLGCMDLDLALMVDCPTSTEENPNKVEL------- 89
           MSTQV NIP LN ANFKDWKEDIQIVLGCMDLDLAL VD PTSTEENPNKVE+       
Sbjct: 1   MSTQVNNIPRLNVANFKDWKEDIQIVLGCMDLDLALRVDRPTSTEENPNKVEIEKWDRSN 60

Query: 90  ---------------RSGI-----------------------EAGTLMTKLISSRYVGKG 149
                          R  I                       EA TLMTKL SSRYVGKG
Sbjct: 61  RMCLMIMKRSIPETFRGSIVEGTNAKSFLKEMKQYFTKNDKAEASTLMTKLTSSRYVGKG 120

Query: 150 NIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKDKWSLNELI 169
           NI+EY MQ S+VATKLKALKL+VSE+FLVHLVLNSL AEYSHFRVSYNTQKDKWSLNELI
Sbjct: 121 NIREYKMQMSSVATKLKALKLKVSEEFLVHLVLNSLSAEYSHFRVSYNTQKDKWSLNELI 180

[Close]

BLAST of Moc10g15450 vs. NCBI nr
Match: KYP36189.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-49
Identity = 135/317 (42.59%), Postives = 166/317 (52.37%), Query Frame = 0


Query: 98  RYVGKGNIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKDKW 157
           RY GKGNI EYIM+ SN+A+KLKALKLE+S+D LVHLVL SLP  +  F+VSYNTQKDKW
Sbjct: 2   RYKGKGNIMEYIMKMSNLASKLKALKLELSDDLLVHLVLISLPTHFRQFKVSYNTQKDKW 61

Query: 158 SLNELISHCVQEEEGMQ------------------------------------------- 217
           +LNELISHCVQEEE  Q                                           
Sbjct: 62  TLNELISHCVQEEERQQREKTESAHLASSSQNRKRKNNKDVVEKTSRQKKVKKDEKTLTC 121

Query: 218 -----------------------------------------------------PNEKKLD 277
                                                                 +E KL+
Sbjct: 122 FFCKHALKTVVYILNRVPSKAVNKTPYELWKGKRPSLKYLHIWGCPAEVRPDRSHESKLE 181

Query: 278 SRTISCYFVGYAERSRGFKFYNPTSGNFFKTGNARFLENIEFEGRNKSRDIVFKEENATI 316
           SR +SCYFVGY ERSRG+K YNPT+ +FF+TGNARFLE++EF      R++VF+EE ++I
Sbjct: 182 SRIVSCYFVGYPERSRGYKVYNPTTRSFFETGNARFLEDVEFGMEENIRNVVFEEE-SSI 241

[Close]

BLAST of Moc10g15450 vs. NCBI nr
Match: KYP40485.1 (hypothetical protein KK1_038173 [Cajanus cajan])

HSP 1 Score: 206.1 bits (523), Expect = 4.5e-49
Identity = 122/251 (48.61%), Postives = 163/251 (64.94%), Query Frame = 0


Query: 86  EAGTLMTKLISSRYVGKGNIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSH 145
           +A +L+ KLI  RY GKGNI++YIM+ SN+A+KLK LKLE+S D LVHLVL SLP  +  
Sbjct: 42  DASSLLAKLIFVRYKGKGNIRKYIMEMSNLASKLKVLKLELSNDLLVHLVLISLPTHFGQ 101

Query: 146 FRVSYNTQKDKWSLNELISHCVQEEEGMQPNEKK------LDSRTISCYFV---GY---- 205
           F+VSYNTQKDKW+LNELISH VQEEE  Q  + +          T++C+F    G+    
Sbjct: 102 FKVSYNTQKDKWTLNELISHYVQEEERQQREKTESVYLASSSENTLTCFFCKKPGHMKKE 161

Query: 206 -------AERSRGFKFYNPTSGNFFKTGNARFLENIEFEGRNKSRDIVFKEENATIRNDV 265
                   +RSRG+KFYNPT+ +FF+T N RFL+++EF      R+++F+ E   I +D 
Sbjct: 162 KSVPSTPIKRSRGYKFYNPTTRSFFETRNERFLKDVEFGKEENIRNVIFEGE-PVIDSDQ 221

Query: 266 VTLP-TIVSKVILDNDTQDEVPTLDVITFQDNTKDTSLYPIDQPQHTQEVSLRRSTRERG 316
           V +P TI    ++  D    +P  +++  QDN +     PIDQ Q  +EVSLRRSTRER 
Sbjct: 222 VFVPITIPVLTLVIGDNHGFIP--NIVPVQDNIEVLPQIPIDQAQQPREVSLRRSTRERR 281

[Close]

BLAST of Moc10g15450 vs. NCBI nr
Match: KAA8544866.1 (hypothetical protein F0562_019739 [Nyssa sinensis])

HSP 1 Score: 203.0 bits (515), Expect = 3.8e-48
Identity = 145/403 (35.98%), Postives = 194/403 (48.14%), Query Frame = 0


Query: 26   NSDNMSTQVN-IPTLNGANFKDWKEDIQIVLGCMDLDLALMVDCPTS------------- 85
            ++ N++  +N IP LNG NFK W E++QIVLG MDLDLAL V  P               
Sbjct: 745  SASNITASINSIPMLNGTNFKTWHENLQIVLGVMDLDLALRVSSPAPLTDESSSDEKRDF 804

Query: 86   ------------------------------------TEENPNKVELRSGIEAGTLMTKLI 145
                                                 EE  N+       E  TL+  LI
Sbjct: 805  ERWEKSNRMCLMIIKKAIPEAFRGTISETIKTAKEFLEEIKNRFAKNEKSETSTLLANLI 864

Query: 146  SSRYVGKGNIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKD 205
            S RY G GNI+EYIM+ S++A+KL+A KL++SED LVHLVL SLP ++S F+VSYN QK+
Sbjct: 865  SMRYKGNGNIREYIMEMSHLASKLRAHKLDLSEDLLVHLVLISLPTQFSQFKVSYNCQKE 924

Query: 206  KWSLNELISHCVQEEEGMQ-----------------------------PNEKK--LDSRT 265
             WSLNELISHCVQEEE ++                             P +KK   +   
Sbjct: 925  TWSLNELISHCVQEEERLKQEKIKSAHLASTSKDKGKKRKKNKEAAEVPYQKKQHKEKNV 984

Query: 266  ISCYFVG------------YAERS----------------RGFKFYNPTSGNFFKTGNAR 316
              C+F G            +A R+                RG+KFY+P + + F+T NAR
Sbjct: 985  DGCFFCGAVGHKKKQCTNYHAWRAKKGDGKKFEVEAIGIFRGYKFYDPNTRSIFETENAR 1044

[Close]

BLAST of Moc10g15450 vs. ExPASy TrEMBL
Match: A0A151RFD4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_037529 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 157/420 (37.38%), Postives = 195/420 (46.43%), Query Frame = 0


Query: 39  LNGANFKDWKEDIQIVLGCMDLDLALMVDCPTSTEEN--PNKVE---------------- 98
           LNG NFK WKE ++I++GCMDLDLA  V+ PT T EN   +KVE                
Sbjct: 2   LNGTNFKAWKEAVEIIIGCMDLDLAFRVEKPTPTPENLDEDKVEKWERSNRMCLMIMKRS 61

Query: 99  ---------------------------LRSGIEAGTLMTKLISSRYVGKGNIKEYIMQTS 158
                                           +A  L  KLIS RY GKGNI++YIM+ S
Sbjct: 62  VPEVFQGSISESQNDKGFLDAVEHYFTSNEKADARRLFAKLISMRYKGKGNIRDYIMEMS 121

Query: 159 NVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEEGM 218
           N+A+KLKALKLE+S+D LVHL L SLP ++  F+VSYNTQKDKW+LNELISH VQEEE  
Sbjct: 122 NLASKLKALKLELSDDLLVHLFLISLPTQFGQFKVSYNTQKDKWTLNELISHYVQEEERQ 181

Query: 219 Q----------------------------------------------------------- 278
           Q                                                           
Sbjct: 182 QREKTELALFLRECGIAPQYTMPGKPSMNGVAERRNRTLKDMVRSMISHSSLPESLWGEA 241

Query: 279 -----------------------------------------------PNEKKLDSRTISC 308
                                                          P+E KL+SRT+SC
Sbjct: 242 LKTAVYILNRVPSKAVNKTPYELWTGKRPSLKHLHIWGCPAEARPYRPHESKLESRTVSC 301

[Close]

BLAST of Moc10g15450 vs. ExPASy TrEMBL
Match: A0A6J1DQP2 (uncharacterized protein LOC111022228 OS=Momordica charantia OX=3673 GN=LOC111022228 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.7e-52
Identity = 123/185 (66.49%), Postives = 128/185 (69.19%), Query Frame = 0


Query: 30  MSTQV-NIPTLNGANFKDWKEDIQIVLGCMDLDLALMVDCPTSTEENPNKVEL------- 89
           MSTQV NIP LN ANFKDWKEDIQIVLGCMDLDLAL VD PTSTEENPNKVE+       
Sbjct: 1   MSTQVNNIPRLNVANFKDWKEDIQIVLGCMDLDLALRVDRPTSTEENPNKVEIEKWDRSN 60

Query: 90  ---------------RSGI-----------------------EAGTLMTKLISSRYVGKG 149
                          R  I                       EA TLMTKL SSRYVGKG
Sbjct: 61  RMCLMIMKRSIPETFRGSIVEGTNAKSFLKEMKQYFTKNDKAEASTLMTKLTSSRYVGKG 120

Query: 150 NIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKDKWSLNELI 169
           NI+EY MQ S+VATKLKALKL+VSE+FLVHLVLNSL AEYSHFRVSYNTQKDKWSLNELI
Sbjct: 121 NIREYKMQMSSVATKLKALKLKVSEEFLVHLVLNSLSAEYSHFRVSYNTQKDKWSLNELI 180

[Close]

BLAST of Moc10g15450 vs. ExPASy TrEMBL
Match: A0A151R109 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_042712 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49
Identity = 135/317 (42.59%), Postives = 166/317 (52.37%), Query Frame = 0


Query: 98  RYVGKGNIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKDKW 157
           RY GKGNI EYIM+ SN+A+KLKALKLE+S+D LVHLVL SLP  +  F+VSYNTQKDKW
Sbjct: 2   RYKGKGNIMEYIMKMSNLASKLKALKLELSDDLLVHLVLISLPTHFRQFKVSYNTQKDKW 61

Query: 158 SLNELISHCVQEEEGMQ------------------------------------------- 217
           +LNELISHCVQEEE  Q                                           
Sbjct: 62  TLNELISHCVQEEERQQREKTESAHLASSSQNRKRKNNKDVVEKTSRQKKVKKDEKTLTC 121

Query: 218 -----------------------------------------------------PNEKKLD 277
                                                                 +E KL+
Sbjct: 122 FFCKHALKTVVYILNRVPSKAVNKTPYELWKGKRPSLKYLHIWGCPAEVRPDRSHESKLE 181

Query: 278 SRTISCYFVGYAERSRGFKFYNPTSGNFFKTGNARFLENIEFEGRNKSRDIVFKEENATI 316
           SR +SCYFVGY ERSRG+K YNPT+ +FF+TGNARFLE++EF      R++VF+EE ++I
Sbjct: 182 SRIVSCYFVGYPERSRGYKVYNPTTRSFFETGNARFLEDVEFGMEENIRNVVFEEE-SSI 241

[Close]

BLAST of Moc10g15450 vs. ExPASy TrEMBL
Match: A0A151RDK8 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_038173 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.2e-49
Identity = 122/251 (48.61%), Postives = 163/251 (64.94%), Query Frame = 0


Query: 86  EAGTLMTKLISSRYVGKGNIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSH 145
           +A +L+ KLI  RY GKGNI++YIM+ SN+A+KLK LKLE+S D LVHLVL SLP  +  
Sbjct: 42  DASSLLAKLIFVRYKGKGNIRKYIMEMSNLASKLKVLKLELSNDLLVHLVLISLPTHFGQ 101

Query: 146 FRVSYNTQKDKWSLNELISHCVQEEEGMQPNEKK------LDSRTISCYFV---GY---- 205
           F+VSYNTQKDKW+LNELISH VQEEE  Q  + +          T++C+F    G+    
Sbjct: 102 FKVSYNTQKDKWTLNELISHYVQEEERQQREKTESVYLASSSENTLTCFFCKKPGHMKKE 161

Query: 206 -------AERSRGFKFYNPTSGNFFKTGNARFLENIEFEGRNKSRDIVFKEENATIRNDV 265
                   +RSRG+KFYNPT+ +FF+T N RFL+++EF      R+++F+ E   I +D 
Sbjct: 162 KSVPSTPIKRSRGYKFYNPTTRSFFETRNERFLKDVEFGKEENIRNVIFEGE-PVIDSDQ 221

Query: 266 VTLP-TIVSKVILDNDTQDEVPTLDVITFQDNTKDTSLYPIDQPQHTQEVSLRRSTRERG 316
           V +P TI    ++  D    +P  +++  QDN +     PIDQ Q  +EVSLRRSTRER 
Sbjct: 222 VFVPITIPVLTLVIGDNHGFIP--NIVPVQDNIEVLPQIPIDQAQQPREVSLRRSTRERR 281

[Close]

BLAST of Moc10g15450 vs. ExPASy TrEMBL
Match: A0A5J5BQA6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_019739 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-48
Identity = 145/403 (35.98%), Postives = 194/403 (48.14%), Query Frame = 0


Query: 26   NSDNMSTQVN-IPTLNGANFKDWKEDIQIVLGCMDLDLALMVDCPTS------------- 85
            ++ N++  +N IP LNG NFK W E++QIVLG MDLDLAL V  P               
Sbjct: 745  SASNITASINSIPMLNGTNFKTWHENLQIVLGVMDLDLALRVSSPAPLTDESSSDEKRDF 804

Query: 86   ------------------------------------TEENPNKVELRSGIEAGTLMTKLI 145
                                                 EE  N+       E  TL+  LI
Sbjct: 805  ERWEKSNRMCLMIIKKAIPEAFRGTISETIKTAKEFLEEIKNRFAKNEKSETSTLLANLI 864

Query: 146  SSRYVGKGNIKEYIMQTSNVATKLKALKLEVSEDFLVHLVLNSLPAEYSHFRVSYNTQKD 205
            S RY G GNI+EYIM+ S++A+KL+A KL++SED LVHLVL SLP ++S F+VSYN QK+
Sbjct: 865  SMRYKGNGNIREYIMEMSHLASKLRAHKLDLSEDLLVHLVLISLPTQFSQFKVSYNCQKE 924

Query: 206  KWSLNELISHCVQEEEGMQ-----------------------------PNEKK--LDSRT 265
             WSLNELISHCVQEEE ++                             P +KK   +   
Sbjct: 925  TWSLNELISHCVQEEERLKQEKIKSAHLASTSKDKGKKRKKNKEAAEVPYQKKQHKEKNV 984

Query: 266  ISCYFVG------------YAERS----------------RGFKFYNPTSGNFFKTGNAR 316
              C+F G            +A R+                RG+KFY+P + + F+T NAR
Sbjct: 985  DGCFFCGAVGHKKKQCTNYHAWRAKKGDGKKFEVEAIGIFRGYKFYDPNTRSIFETENAR 1044

[Close]

BLAST of Moc10g15450 vs. TAIR 10
Match: AT5G53670.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-11
Identity = 52/206 (25.24%), Postives = 85/206 (41.26%), Query Frame = 0


Query: 25  GNSDNMSTQVNIPTLNGANFKDWKEDIQIVLGCMDLDLALMVDCPTSTEENPN------- 84
           G + ++S   +IP L+G+NF +WKE + +VL  MDLDL+LM + P+S +E  +       
Sbjct: 27  GYTSSLSNVDSIPMLSGSNFSEWKEHLLLVLALMDLDLSLMTERPSSPKELKHWDRSNRV 86

Query: 85  -----KVELRSGI----------------------------EAGTLMTKLISSRYVGKGN 144
                K+ +  G                             E   +  +  S  Y+   N
Sbjct: 87  SIMIMKIRIPQGFRGVVPDDVTTAKDFLASLENFFAKNEEAERSRVQAESSSMSYIENEN 146

Query: 145 IKEYIMQTSNVATKLKALKLE---VSEDFLVHLVLNSLPAEYSHFRVSYNTQKDK----- 175
           ++E IM+   +  K K L +     ++  L H  +  LP +Y   +  Y+  + K     
Sbjct: 147 VRELIMRMKTLGAKRKRLGINNIFSNDMMLAHCAVKMLPLQYISLKNVYSCLEGKFVNEN 206

[Close]

BLAST of Moc10g15450 vs. TAIR 10
Match: AT5G53690.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 135 VLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEEGMQPNEKK 180
           VL+SLP++Y   R +Y+  K +WS ++LISHCVQEEE +  NEKK
Sbjct: 5   VLDSLPSDYDLLRKTYSRMKLEWSTHDLISHCVQEEERL-TNEKK 48

The following BLAST results are available for this feature:

BLAST of Moc10g15450 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP41105.1	2.7e-57	37.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
XP_022155096.1	9.8e-52	66.49	uncharacterized protein LOC111022228 [Momordica charantia]	[more]
KYP36189.1	3.5e-49	42.59	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
KYP40485.1	4.5e-49	48.61	hypothetical protein KK1_038173 [Cajanus cajan]	[more]
KAA8544866.1	3.8e-48	35.98	hypothetical protein F0562_019739 [Nyssa sinensis]	[more]

BLAST of Moc10g15450 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc10g15450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151RFD4	1.3e-57	37.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=...	[more]
A0A6J1DQP2	4.7e-52	66.49	uncharacterized protein LOC111022228 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A151R109	1.7e-49	42.59	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=...	[more]
A0A151RDK8	2.2e-49	48.61	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_038173 PE=4 SV=1	[more]
A0A5J5BQA6	1.9e-48	35.98	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_019739 PE=3 SV=1	[more]

BLAST of Moc10g15450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53670.1	1.4e-11	25.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G53690.1	1.3e-06	55.56	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 89..172 e-value: 1.6E-13 score: 50.6
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 35..74
None	No IPR available	PANTHER	PTHR35317:SF3	TRANSMEMBRANE PROTEIN	coord: 85..179
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 85..179
None	No IPR available	PANTHER	PTHR35317:SF3	TRANSMEMBRANE PROTEIN	coord: 35..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g15450.1	Moc10g15450.1	mRNA