Moc10g15050 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g15050
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Locationchr10: 11424477 .. 11425196 (+)
RNA-Seq ExpressionMoc10g15050
SyntenyMoc10g15050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCAACGAGGAACAAGAGCCCGTCCAGGAATACATAAAAAGCCAACTTGTGGAGCAAGAATAAAGAACTTATATGCACCACCTACCCATATCTCAGAAAAGTTGGTGGAGGAATTTTATGCTAGCATTCACCCTCATAAAGACGATGTCGTGTGCATAAGGGGTAAGTTTGTAAGTTTCTATCCCTCGATCATTAATGCTTATTTGGGTTTGCTCGATACTTTCAATGTAGTGGGGAATGATCACATTGTGCACCCAATGGACGAGCAAGTGGAGGAAGCTAAAAGGTTAGTTTGTAGGCCTAAGAAGACATGGATAGTATCCATCACTGGAGTGTTATTCTTGATGCAATTTGATCTTAATGAAAAGACCACGGTTTAGTATTATATGGTCAAGAACCAGTTGATTCCTACTTCTCACAACTCCTTCATCAAGAGGACTAGGGTGATGATGGTCTACTACCTCATGAAGGGGATCGAGTTCAACTTTGGCCAACTCATTAGAGATCAAATACGAGTTTGTTCAGAAAAAACGAGAGACCCTTTTTTCTTTCCTTCACCAATAACTAAGTTATGTTTAAGGGTTGGCGTGGAAGTGAACGAGGAGGACGTGGTGACACCCAAAAAGTGGGCCACCTCAATGAGGCGAGTACGGAGGTACTCTATAGTTCGTGAAGAAGACTCTCCTCCTACCGCTTCGGTTCTCGAGACCCGATAA

mRNA sequence

ATGTTTCAACGAGGAACAAGAGCCCGTCCAGGAATACATAAAAAGCCAACTTGTGGAGCAAGAATAAAGAACTTATATGCACCACCTACCCATATCTCAGAAAAGTTGGTGGAGGAATTTTATGCTAGCATTCACCCTCATAAAGACGATGTCGTGTGCATAAGGGTGGGGAATGATCACATTGTGCACCCAATGGACGAGCAAGTGGAGGAAGCTAAAAGGGTTGGCGTGGAAGTGAACGAGGAGGACGTGGTGACACCCAAAAAGTGGGCCACCTCAATGAGGCGAGTACGGAGGTACTCTATAGTTCGTGAAGAAGACTCTCCTCCTACCGCTTCGGTTCTCGAGACCCGATAA

Coding sequence (CDS)

ATGTTTCAACGAGGAACAAGAGCCCGTCCAGGAATACATAAAAAGCCAACTTGTGGAGCAAGAATAAAGAACTTATATGCACCACCTACCCATATCTCAGAAAAGTTGGTGGAGGAATTTTATGCTAGCATTCACCCTCATAAAGACGATGTCGTGTGCATAAGGGTGGGGAATGATCACATTGTGCACCCAATGGACGAGCAAGTGGAGGAAGCTAAAAGGGTTGGCGTGGAAGTGAACGAGGAGGACGTGGTGACACCCAAAAAGTGGGCCACCTCAATGAGGCGAGTACGGAGGTACTCTATAGTTCGTGAAGAAGACTCTCCTCCTACCGCTTCGGTTCTCGAGACCCGATAA

Protein sequence

MFQRGTRARPGIHKKPTCGARIKNLYAPPTHISEKLVEEFYASIHPHKDDVVCIRVGNDHIVHPMDEQVEEAKRVGVEVNEEDVVTPKKWATSMRRVRRYSIVREEDSPPTASVLETR
Homology
[Close]
BLAST of Moc10g15050 vs. NCBI nr
Match: XP_022158483.1 (uncharacterized protein LOC111024964 [Momordica charantia])

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-08
Identity = 42/86 (48.84%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 32  ISEKLVEEFYASIHPHKDDVVCIRVGNDHIVHPMDEQVEEAKRVGVEVNEEDVVTPKKWA 91
           + E LV+EFYA+IHP++ D V +R                    G++ N+EDVVTPKK A
Sbjct: 317 VLEALVKEFYAAIHPNQGDAVRVR--------------------GMKANDEDVVTPKKSA 376

Query: 92  TSMRRVRRYSIVREEDSPPTASVLET 118
           TSMRRVR Y IVREEDS  T +  ET
Sbjct: 377 TSMRRVRGYLIVREEDSSITVADPET 382

[Close]
BLAST of Moc10g15050 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-08
Identity = 56/178 (31.46%), Postives = 74/178 (41.57%), Query Frame = 0 

Query: 23   KNLYAPPTHISEKLVEEFYASIHPHKDDVVCIRVGNDHIVHPMDEQVEEAKRV------- 82
            + L+AP T +SE LV+EFY +I+P++ D V +R GN+ +VHP DEQVEEA+R+       
Sbjct: 1154 ETLFAPITRVSEALVKEFYTAINPNRGDEVRVR-GNEILVHPSDEQVEEARRLICRPHKT 1213

Query: 83   ------------------------------------------------------------ 119
                                                                        
Sbjct: 1214 WTISTMGKLSLKPLDINEQATVWMYVVKNRLIPTSYDSSIKRNRAMIVYILVKGVEFNFG 1273

[Close]
BLAST of Moc10g15050 vs. ExPASy TrEMBL
Match: A0A6J1DW79 (uncharacterized protein LOC111024964 OS=Momordica charantia OX=3673 GN=LOC111024964 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 5.4e-09
Identity = 42/86 (48.84%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 32  ISEKLVEEFYASIHPHKDDVVCIRVGNDHIVHPMDEQVEEAKRVGVEVNEEDVVTPKKWA 91
           + E LV+EFYA+IHP++ D V +R                    G++ N+EDVVTPKK A
Sbjct: 317 VLEALVKEFYAAIHPNQGDAVRVR--------------------GMKANDEDVVTPKKSA 376

Query: 92  TSMRRVRRYSIVREEDSPPTASVLET 118
           TSMRRVR Y IVREEDS  T +  ET
Sbjct: 377 TSMRRVRGYLIVREEDSSITVADPET 382

[Close]
BLAST of Moc10g15050 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08
Identity = 56/178 (31.46%), Postives = 74/178 (41.57%), Query Frame = 0 

Query: 23   KNLYAPPTHISEKLVEEFYASIHPHKDDVVCIRVGNDHIVHPMDEQVEEAKRV------- 82
            + L+AP T +SE LV+EFY +I+P++ D V +R GN+ +VHP DEQVEEA+R+       
Sbjct: 1154 ETLFAPITRVSEALVKEFYTAINPNRGDEVRVR-GNEILVHPSDEQVEEARRLICRPHKT 1213

Query: 83   ------------------------------------------------------------ 119
                                                                        
Sbjct: 1214 WTISTMGKLSLKPLDINEQATVWMYVVKNRLIPTSYDSSIKRNRAMIVYILVKGVEFNFG 1273

The following BLAST results are available for this feature:
BLAST of Moc10g15050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158483.11.1e-0848.84uncharacterized protein LOC111024964 [Momordica charantia][more]
XP_022154847.12.5e-0831.46LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia][more]
BLAST of Moc10g15050 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc10g15050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DW795.4e-0948.84uncharacterized protein LOC111024964 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DMT31.2e-0831.46LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia... [more]
BLAST of Moc10g15050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g15050.1Moc10g15050.1mRNA