Moc10g14580 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g14580
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Locationchr10: 11120904 .. 11126162 (-)
RNA-Seq ExpressionMoc10g14580
SyntenyMoc10g14580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCTGATGAGAGATTATATGACCAAGAATGATGCTTTGATTCAAAGCCAAGCTGCTACTTTAAGAAATATGGAAGTTCAACTGGGACAGATGGCTATTGAATTGAAAAACAGGCCACAACGCTTACCATGTGATATTGAGAATCCTAAGAAGGAAGGGAATGAGCAATGTCAAGCATTGACTCTTCACAGTGGAAAGGCATTACCACACCCATACCCGTCTCTGATGCAAGAGGATAATGTAATTCAGTAAGAGGAACCACAGACAGAAAAGATAATTGAAAGTGTAGTAGAGAATATGACCATTGAAGAGAACATAGTGAACAATGCTGGAGCATCAGCTGAGCAAACGAGACAACAAAGGAAATAGGGTAGCAGGAAAGAAGGCAGCAGAAACAAGACCAGTTGAAAAAGTCTCAATGGAAACTCCAATGCAAAAGAAAGTAAAAATTCCAGTGGAGCACAAAGCACCTCCTCTTTACCCTCAGAGATTGCAAAAGAAAAGCCCAGACTTACATTTTACTGTTTTTTAGAGATGCTGAAGCAGCCCCATATTAACATACCCTTGGTGGAAGCACTGGAGCAAATGCCAAACTACGTTAAATTTCCCAATGACATATTGACAAAGAAAAGAAGACTATGAGAATTTGAAATAGTGGCTTTGAAAAAGGAATGTAGTGCAATCCTCATAGGAAAGTTTCCTCAGAAAATGGGTGACCAAGGGAATTTCACCATTCCTGTGTCTATAGGAGGAAAGAATGTAGGGCATGCTCTGTGTGACTTGGGAGCTAGCATCAACCTTATGCCCCTATCGGTGTATCAAAAGATAGAGAATTGTGAAGTAAGACCCATGACCGTTACCTTGCAGTTGGCAGATAGGTCCATTACACACCCTGGAGGTAAGATTGAGTTCGTTTTGGTGTAGGTGGAAAAATTTATCTTTCCAGTAGACTTCATCATACTGGACTATGAAGCTGACAAGGAAATCCCAATTATTTTAGGAAGACCGTTCTTATCCACGGGTAGAGCCTTAACAGATGTACATAATGGAGAGCTGACCGTGAGAGTTAATGACCAGCAGGTGACATTTTCTGTTTTTAATAACATTAAATTTCCTACTGATGTAGAAAAATGTTATTTGTTAAGGCTTCTAGATGATTTACTGAGTGAAGAAATGTAAACGGCAGAGCTGCTAGACCAGCTGGAGGAGGAGGTAACCAAAATTTTCGAAGAAAAGGAAAAAGAAGCCAATTTGATCCAAGGCAAACCAAATGAAGCCCCATCCAATAGAGTCTACAAGAAAACATTTGAATCGCTAGAATTGAAGGACAGAGCGCGCCATTACAGCCATCTGTGGAGAAAGCCCCCAAGTTGGAGCTGAAGGTTTTGCCAACACATCTTAAATACACTTATCTTGGAGAAGCTGAGACATTGCCAATAATAATTGCAGCTGACTTGGCTGAAGAGAAAGAGTTTCAGCTGATAGAAATGCTGAAGAATCACAAAAGGGCCGTTGGTTGGACTATAGCAGACATAAAGGGGATCAGTCCAAGCTATTGCATGCATAAAATCAATCTGGAATAGGACTGCAAGAACTCAATTAAGCACTAGAGAAGGCTGAACCCTACTATGAAGAAAGTAGTCAAGAAAGAAATCTTCAAGTGGCTTGATACTGGGTTAATTTACCCAATAGCAAACAGTGATTGGGTCAGCCCAGTCCAATGTGTATCCAAGAAATGAAGGATTACAGTGGTGCCAAATGACAACAACGAGCTGATTCCCACAAAGGACCACAACATGTTGGCACATTTGTATGGATTATAGAAATATGAACAAGGCAACCAAGAAGGACCACTTCTCACTACCATTCATTGATTAGATGTTAGATCGTTTGGCTGGACAAGAATAATATTGTTTCTTGGACGGATACAGTGGTTACAACCAAATTACCATAGCCACTCAAGACCAGCAAAAGACTACATTCACTTACCCATATGGTACGTTTGCATTTAGGAGGATGCCCTTTGGATTGTGCAATGCTCCAGCAACATTCCAGAGATGTATGATGACAATCTTCTCGGACTTAATAGAAAGTGTGGTTGAGGTCTTCATGGACGATTTCTCAGTCTTTGGAAGAGACTTTAGCGAATGTTTGAGCAATTTGGAGCAAGTGTTGAAGAGGTGCGAGGATACCAATTTGGTGCTCAACTGGAAAAAATGCCGCTTTATGGTGAAGTAAGTAATAGTGTTGGGCCACAAAATATCCAAGAAGGGAATAGAAGTGGACAGAGCCAAGATTAAAATAATAGAGAAGCTGCCATCGCCCACCTTAGTCAGAGGAGTTAGAAGTTTCCTTGGGCATGCTGGGTTTTACAGGAGATTCATCAAGGACTTCTCAAAATTTTCTAAACCTGTATGCTCTCTATTAGAAAATGAACGAATTTTGACTTTTCTTCTAATTATTTGCAGGCTTTCACTACTTTAAAAGCAGCTCCTATCTAGACTCCCATCATGACAGCCCCAAATTGGAATGAACCTTTCAAGGTCATGTGTGATGCTAGTGATTATCCGGTAGGATCTGTAGTAGGACAAAGGAAAGAGAAGCTGATTCACCCAATTTATTATGCCAGCAGAACATTGGTGGAAGATCAACTCAATTACACTACCATTGAGAAAAAGCTGCTAGCAGTGGTCTTTGCGTTTGAAAAATTCAGAGCTTACCTTATTAGAATGAAGGTAGTTGTATACACATACCACGTAGCATCAAGTATTTGTTAGCCAAGATGCCAAGCCAAGGCTAATTAGATGGGTGTTGCTTCTGTAGGAATTCAAATTGGAGATCAGAGATAAGAAAGGTTTGGAGAACCAAGTTGCAGACCATTTATCAAGGGTAGAGCTTGAGGGAACAGTGGAAGGGCAGACTGCTATACGAGATGCATTCCCTGATGAACAGCTGTTAGTGGTGATAGAAAATAAGAAAGACTTGGAACCATGGTTTGCTAACATGGCCAACTATGTGGCTAGTGGAATTTTAACACTAGACATGAGGAAGCAACAACTAAAACAGTTCATTCATGACAGTAAGTTTTACTACTGAAATGACCCTTATCTGTACAAGCTATACAAAGACCAAATTATGCGGAGATGTGTTGATAGTGCTGAAGCATCAATAGTGCTGAAGCATCGATAGTGCTGGAGCATTGTCACTCTGCTCCTTATGGTAGACATTTTGGAGGACAGTGAACTGCAGCCAAAATTTTTCAAAGTGGCTATTATTGGCGAATGGTCTTCCAAGATTCACACTCATATGTGAAGAACTGTGACAAATGCCAAAGGGTAGGAAACATCTCAAATAAGTCAGAAATGCCTCTAAATTTTATCCTTGAAGTAGAGCTCTTTAATGTCTGGGGAATAGACTTTATGGGACCTTTCCCCGTATCAAATGGTAACCTCTACATCCTTCTGGTTGTAGACTATGTCTCTAAATGGGTGGAAGTCATTGCTTGGGTGACATGTGATGCAAAGTCTGTTTTAAAATTTATGCACAAGAATATATTTACAAGATTTGGAACTCCCAGGGCACTTATCAGTGATGAAGGATCCCATTTTGTTAAAAAGGCCATGAGTTCCCTGTTGGTGAAATACAATATAAAGCATAAAGTGTCCACCGCATACCACCCTCAAACAAACGGCCAAGCAGAGATATCAAACAGAGAAATTAAGGGAATTTTAGAGAAAATGGTACATAGCAGCAGAAAATATTGGCCTTTCAAGTTGGACGACACACTATGGGCATATAGGACAGCCTACAAGACTCCAATAGGAACCTCCCCATATAAACTAGTCTTTGGGAAGGCTGCCATCTACCACTTGAACTGGAACAAAATGTATTTTGGGTTGTCAAAAGGCTAAATATAGATCTATCAGTAGTGGGAGAAGTAAGGAAGTTTCAACTACTAGAATTGGATGAATTTAGAAGAGATGCCTATGAGAATACGAAGGCTTATAAAGAGAAGACCAAAGTTTGGCATTACAGAAGGATAAAACAAAGAACATTTGAGGCAGGACAAAAAGTATTGTTATTCAACTCAAGGTTGAAATTGTTTCCTGGAAAGCTAATATCAAGGTGGTCAGGCCCGTTTACAGTGGTGAAGGTCTACCCCTATGGAGCTGTAATTGTCAACGAAGAAGACACAAAAAGGGAATTCATAGTGAATGAGCAAAGATTGAAGCACTACTGGGGAAGAGAGGTGGTGAGGAAGATGGATTCCCACTAACTGAGGTCAACTTAAAGGATGTACCAGATGAAAATAAAAAGGGGAAGAATTCTTGACTATTTGTTTTTCCCTCTCTTTTAGTTTAATTCTTGTTAAGTAGATTTAAAAGTTCTTAGTAGCAGTTACGAAGGTTTTAACTTGAGGTAGTTTTGTTTGATTTTTTTATATCAAGCAAAGGAAAGACACTCCTATTTAGCAACTAAAAATATAAGTGCAGAAAGGATGAAGTTGAGAAAAATGCGATCAACTTTGTTGATTCTGGAGCATAAATAAGGGGTTATGAAAAATAAAGTTGGATTTAAAAGACGAAGAGGAGTTGGAGGAAAGAGAAAAGTAATCATTGCTCGCAGCAAGTAAATCCGTCAGAAAAGAAATCAGGTTATAAAACCAAAATTTTCTTTAGGACATTATTTTCCACCCATTTTTGGGAAGTAATGGGGCGCCCTTTTTTAGGAAAGATAAAACGGGTGGGAGTTTTTAAAATTCAAAAACTCTAAAAAAGAAGGGAAAGTGATTAAGAGGGTAGTTGGGCATTATTTGTGCATTAATTAGAAGATTTTTTGGTGTGGGTATTTAAGAAAATCGATTTTGGAGAAATTCATCATCGCCCACAAGTTGAAACCCTAATTATGCGCTAACATTCTTTCCCCTCTCTCCCTTTTCCTTTTAGCGCCCTGTCTTTTTCCTTCATCTCAGCCCTAGGCTCCCTGCAGCATCGACAATTCGTTAGCATTGTCATCCCAATATGCCTCGGGTTAAAGCGAAAGCAAGGAAGGGTAAGAAAACTATCCCCCCAAGACCTGACACCATCCCTTTCGCCGAAAAAATCACCAGAAAAAGCTCTAGAGAAGTCTCCCCCCAACCTGACACGTTACCCGAAGAAACCGACCCAGAAAAAGAAATCCCTTCCCCGCCTAAGAAGAAACTGGCAGCCAAAAGAGGAAGAAAACAGCGAAAAGCAAGAGGCTACCAGTTGA

mRNA sequence

ATGGAAGCTCTGATGAGAGATTATATGACCAAGAATGATGCTTTGATTCAAAGCCAAGCTGCTACTTTAAGAAATATGGAAGTTCAACTGGGACAGATGGCTATTGAATTGAAAAACAGGCCACAACGCTTACCATGTGATATTGAGAATCCTAAGAAGGAAGGGAATGAGCAATGTCAAGCATTGACTCTTCACAGTGGAAAGGCATTACCACACCCATACCCGTCTCTGATGCAAGAGGATAATGTAATTCATGCAATCCTCATAGGAAAGTTTCCTCAGAAAATGGGTGACCAAGGGAATTTCACCATTCCTGTGTCTATAGGAGGAAAGAATTTGGCAGATAGGTCCATTACACACCCTGGAGGAAGACCGTTCTTATCCACGGGTAGAGCCTTAACAGATGTACATAATGGAGAGCTGACCGTGAGAGTTAATGACCAGCAGCTTGAGGGAACAGTGGAAGGGCAGACTGCTATACGAGATGCATTCCCTGATGAACAGCTGTTAGTGGTGATAGAAAATAAGAAAGACTTGGAACCATGCGCCCTGTCTTTTTCCTTCATCTCAGCCCTAGGCTCCCTGCAGCATCGACAATTCGTTAGCATTGTCATCCCAATATGCCTCGGGTTAAAGCGAAAGCAAGGAAGGGTAAGAAAACTATCCCCCCAAGACCTGACACCATCCCTTTCGCCGAAAAAATCACCAGAAAAAGCTCTAGAGAAGTCTCCCCCCAACCTGACACGTTACCCGAAGAAACCGACCCAGAAAAAGAAATCCCTTCCCCGCCTAAGAAGAAACTGGCAGCCAAAAGAGGAAGAAAACAGCGAAAAGCAAGAGGCTACCAGTTGA

Coding sequence (CDS)

ATGGAAGCTCTGATGAGAGATTATATGACCAAGAATGATGCTTTGATTCAAAGCCAAGCTGCTACTTTAAGAAATATGGAAGTTCAACTGGGACAGATGGCTATTGAATTGAAAAACAGGCCACAACGCTTACCATGTGATATTGAGAATCCTAAGAAGGAAGGGAATGAGCAATGTCAAGCATTGACTCTTCACAGTGGAAAGGCATTACCACACCCATACCCGTCTCTGATGCAAGAGGATAATGTAATTCATGCAATCCTCATAGGAAAGTTTCCTCAGAAAATGGGTGACCAAGGGAATTTCACCATTCCTGTGTCTATAGGAGGAAAGAATTTGGCAGATAGGTCCATTACACACCCTGGAGGAAGACCGTTCTTATCCACGGGTAGAGCCTTAACAGATGTACATAATGGAGAGCTGACCGTGAGAGTTAATGACCAGCAGCTTGAGGGAACAGTGGAAGGGCAGACTGCTATACGAGATGCATTCCCTGATGAACAGCTGTTAGTGGTGATAGAAAATAAGAAAGACTTGGAACCATGCGCCCTGTCTTTTTCCTTCATCTCAGCCCTAGGCTCCCTGCAGCATCGACAATTCGTTAGCATTGTCATCCCAATATGCCTCGGGTTAAAGCGAAAGCAAGGAAGGGTAAGAAAACTATCCCCCCAAGACCTGACACCATCCCTTTCGCCGAAAAAATCACCAGAAAAAGCTCTAGAGAAGTCTCCCCCCAACCTGACACGTTACCCGAAGAAACCGACCCAGAAAAAGAAATCCCTTCCCCGCCTAAGAAGAAACTGGCAGCCAAAAGAGGAAGAAAACAGCGAAAAGCAAGAGGCTACCAGTTGA

Protein sequence

MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQRLPCDIENPKKEGNEQCQALTLHSGKALPHPYPSLMQEDNVIHAILIGKFPQKMGDQGNFTIPVSIGGKNLADRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGTVEGQTAIRDAFPDEQLLVVIENKKDLEPCALSFSFISALGSLQHRQFVSIVIPICLGLKRKQGRVRKLSPQDLTPSLSPKKSPEKALEKSPPNLTRYPKKPTQKKKSLPRLRRNWQPKEEENSEKQEATS
Homology
BLAST of Moc10g14580 vs. NCBI nr
Match: KAA3473721.1 (retroelement pol polyprotein-like [Gossypium australe])

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-20
Identity = 77/216 (35.65%), Postives = 102/216 (47.22%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQC 60
           +E+L++ YM KNDALIQSQAATL+N+E Q+GQ+A EL+NR Q  LP D ENP+  G E C
Sbjct: 281 LESLLKTYMAKNDALIQSQAATLKNLENQVGQLATELRNRLQGALPSDTENPRNLGKEHC 340

Query: 61  QALTLHSGKALP---------------------------HPYPSLMQEDNVIHA------ 120
           +ALTL S K +                             P P   + D V         
Sbjct: 341 KALTLRSEKIIEPNTVEVEKEQANAQDAEEVQPSVETPVSPEPKSTKPDKVTSGPVNSDQ 400

Query: 121 -----------------ILIGKFPQKMGDQGNFTIPVSIGGKNL---ADRSITHPGGRPF 163
                             +  K P K+ D G FTIP +IG        D+ +    GRPF
Sbjct: 401 PTTSLEVELPPKENQPESVPDKLPPKLKDPGCFTIPCNIGATYCDFEVDKEVPIILGRPF 460

BLAST of Moc10g14580 vs. NCBI nr
Match: XP_030495102.1 (uncharacterized protein LOC115710889 [Cannabis sativa])

HSP 1 Score: 109.0 bits (271), Expect = 6.8e-20
Identity = 85/226 (37.61%), Postives = 109/226 (48.23%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQC 60
           +E+LMRDYMTKNDA+IQSQAA+LRN+EVQLGQ+A +LKNRPQ  LP D ENP+++G E C
Sbjct: 44  LESLMRDYMTKNDAVIQSQAASLRNLEVQLGQLANDLKNRPQGTLPSDTENPRRDGKEHC 103

Query: 61  QALTLHSGK-------ALPHPYPSLMQEDNVIH---AILIG-KFP--------------- 120
           +A+TL SGK       A     PS +Q++  +    AI I  KFP               
Sbjct: 104 KAITLRSGKILESNVVATSSKEPSSIQKEGEMKKKPAISISLKFPDELQHPTTFSAEKSL 163

Query: 121 -----------QKMGDQGNF------------TIP-----------------VSIGGKNL 150
                      +K  D G F             IP                 +    + L
Sbjct: 164 QKLPPPFPQRFKKKQDDGQFRRFLDVLKQLHINIPLVEALEQMPTYVKFLKDILTKKRRL 223

BLAST of Moc10g14580 vs. NCBI nr
Match: XP_022157917.1 (uncharacterized protein LOC111024527 [Momordica charantia])

HSP 1 Score: 106.3 bits (264), Expect = 4.4e-19
Identity = 68/181 (37.57%), Postives = 98/181 (54.14%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQC 60
           +E LM+ YM  ND ++QSQAA+LRN+E+Q+GQ+A +LK+RPQ  +   +E  ++  N   
Sbjct: 88  LEKLMKQYMANNDVIVQSQAASLRNLELQVGQLATDLKSRPQLHVNILVEVLEQMPNYMR 147

Query: 61  QALTLHSGKALPHPYPSLMQEDNVIHAILIGKFPQKMGDQGNFTIPVSIGGKNLA----- 120
               + + K     Y ++         ILI K P KM D G+FTIPVSIGG+ +      
Sbjct: 148 FLKEILTKKRTLGEYETVAM-TKACSTILISKIPAKMKDPGSFTIPVSIGGQQIGLALCD 207

Query: 121 ---------------------DRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGT 155
                                D+ ++   GRPFL T R L DVH GELT+RV DQ+++ +
Sbjct: 208 LGASINLMSLSIYNKLVIAEEDKKVSIILGRPFLPTERVLVDVHKGELTMRVQDQEVKFS 267

BLAST of Moc10g14580 vs. NCBI nr
Match: XP_030505184.1 (uncharacterized protein LOC115720166 [Cannabis sativa])

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-17
Identity = 117/431 (27.15%), Postives = 161/431 (37.35%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQC 60
           +E+LMRDYM KNDA+IQSQAA LRN+E+QLG +A ELK RPQ  LP D ENP+++G EQC
Sbjct: 380 LESLMRDYMAKNDAVIQSQAAFLRNLELQLGHLANELKARPQGSLPSDTENPRRDGKEQC 439

Query: 61  QALTLHSGKAL------------------------------------------------- 120
           +++ L SGK L                                                 
Sbjct: 440 KSIHLRSGKHLKNSEEEIKGSGEPTSIQIDEKLSKKTAQEIADTRRVDTATGQQSNSQQS 499

Query: 121 ---------PHPYP------------------------------SLMQEDNVI------- 180
                    P P+P                              +L Q  N +       
Sbjct: 500 APVCSSSKPPLPFPQRFQKQQQDGQFKKFLDVLKQLHINIPLVEALEQMPNYVKFLKDIL 559

Query: 181 -----------------HAILIGKFPQKMGDQGNFTIPVSIGGKN--------------L 240
                             A+L  K P K+ D G+FTIP+SIGG++              L
Sbjct: 560 TKKRRLGEFESRLTEGQKAMLKNKIPPKLKDPGSFTIPISIGGRDLGIGEARPTTVTLQL 619

Query: 241 ADRSITHPGG----------------------------------RPFLSTGRALTDVHNG 270
           ADRS+ HP G                                  RPFL+TGR L DV  G
Sbjct: 620 ADRSMAHPDGKIEDVLVQVDKFIFPADFIILDYEEDREVPIILRRPFLATGRTLIDVEKG 679

BLAST of Moc10g14580 vs. NCBI nr
Match: XP_030505532.1 (uncharacterized protein LOC115720524 [Cannabis sativa])

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-17
Identity = 91/305 (29.84%), Postives = 119/305 (39.02%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQC 60
           +E+LMRDYM K DA+IQSQ A+LRN+E+QLG +A ELK RPQ  LP D +NP+++G EQC
Sbjct: 270 LESLMRDYMAKIDAVIQSQVASLRNLELQLGHLANELKARPQGSLPSDTKNPRRDGKEQC 329

Query: 61  QALTLHSGK------------------------AL-------PHPYP------------- 120
           +++ L SGK                        AL       P P+P             
Sbjct: 330 KSIQLRSGKHPKNYEEEIKVDTAKGQQPNSQQSALVCSSPKPPLPFPQRFRKQQQDGQFK 389

Query: 121 -----------------SLMQEDNVI-------------------------HAILIGKFP 149
                            +L Q  N +                         +A+L  K P
Sbjct: 390 KFLDVLKQLHINIPLVEALEQMPNYVKFLKDILTKKRRLGEFETVALTEGCNAMLKSKIP 449

BLAST of Moc10g14580 vs. ExPASy TrEMBL
Match: A0A5B6VWJ0 (Retroelement pol polyprotein-like OS=Gossypium australe OX=47621 GN=EPI10_024080 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.5e-20
Identity = 77/216 (35.65%), Postives = 102/216 (47.22%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQC 60
           +E+L++ YM KNDALIQSQAATL+N+E Q+GQ+A EL+NR Q  LP D ENP+  G E C
Sbjct: 281 LESLLKTYMAKNDALIQSQAATLKNLENQVGQLATELRNRLQGALPSDTENPRNLGKEHC 340

Query: 61  QALTLHSGKALP---------------------------HPYPSLMQEDNVIHA------ 120
           +ALTL S K +                             P P   + D V         
Sbjct: 341 KALTLRSEKIIEPNTVEVEKEQANAQDAEEVQPSVETPVSPEPKSTKPDKVTSGPVNSDQ 400

Query: 121 -----------------ILIGKFPQKMGDQGNFTIPVSIGGKNL---ADRSITHPGGRPF 163
                             +  K P K+ D G FTIP +IG        D+ +    GRPF
Sbjct: 401 PTTSLEVELPPKENQPESVPDKLPPKLKDPGCFTIPCNIGATYCDFEVDKEVPIILGRPF 460

BLAST of Moc10g14580 vs. ExPASy TrEMBL
Match: A0A6J1DVS9 (uncharacterized protein LOC111024527 OS=Momordica charantia OX=3673 GN=LOC111024527 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-19
Identity = 68/181 (37.57%), Postives = 98/181 (54.14%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQC 60
           +E LM+ YM  ND ++QSQAA+LRN+E+Q+GQ+A +LK+RPQ  +   +E  ++  N   
Sbjct: 88  LEKLMKQYMANNDVIVQSQAASLRNLELQVGQLATDLKSRPQLHVNILVEVLEQMPNYMR 147

Query: 61  QALTLHSGKALPHPYPSLMQEDNVIHAILIGKFPQKMGDQGNFTIPVSIGGKNLA----- 120
               + + K     Y ++         ILI K P KM D G+FTIPVSIGG+ +      
Sbjct: 148 FLKEILTKKRTLGEYETVAM-TKACSTILISKIPAKMKDPGSFTIPVSIGGQQIGLALCD 207

Query: 121 ---------------------DRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGT 155
                                D+ ++   GRPFL T R L DVH GELT+RV DQ+++ +
Sbjct: 208 LGASINLMSLSIYNKLVIAEEDKKVSIILGRPFLPTERVLVDVHKGELTMRVQDQEVKFS 267

BLAST of Moc10g14580 vs. ExPASy TrEMBL
Match: A0A5B6VKQ8 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Gossypium australe OX=47621 GN=EPI10_015477 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.6e-17
Identity = 66/188 (35.11%), Postives = 99/188 (52.66%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRPQ-RLPCDIENPKKEGNEQC 60
           MEAL+++YM KND +IQSQA +LR +E Q+GQ++  L +R Q  LP D +N + +G E C
Sbjct: 1   MEALLKEYMAKNDVVIQSQATSLRALENQVGQISSALNSRQQGALPSDTKNSRYQGKEHC 60

Query: 61  QALTLHSGKALPHPY-PSLMQEDNVIHAILIGKFPQ------------KMGDQGNFTIPV 120
           +A+T  SG  LP     ++++ED++         PQ            +M +   F   +
Sbjct: 61  KAITFRSGTQLPGVVNDAVVEEDSLDFIDKANSEPQLHINISLVEALEQMPNYVKFVKDI 120

Query: 121 SIGGKNLADRSITHPGGRPFLSTGRALTDVHNGELTVRVNDQQLEGTVEGQTAIRDAFPD 175
            +    L +  I      PFL+TGR L D+  GELT+RVNDQQ    V       D   D
Sbjct: 121 LLKKLRLGEFEIVAFIEGPFLATGRILVDLQKGELTMRVNDQQRTFNVFDAMKCVDTSKD 180

BLAST of Moc10g14580 vs. ExPASy TrEMBL
Match: A0A6J1DWK1 (uncharacterized protein LOC111025053 OS=Momordica charantia OX=3673 GN=LOC111025053 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.2e-15
Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRP-QRLPCDIENPKKEGNEQC 60
           +E +M+ YM  NDA +QSQAA+LRN+E+Q+GQ+A++LK+RP   LP D E PK++  EQC
Sbjct: 251 LENIMKQYMANNDATVQSQAASLRNLELQVGQLAMDLKSRPVGALPSDTEVPKRDSKEQC 310

Query: 61  QALTLHSGKALP--HP-YPSLMQEDNVIHAILIGKFPQKMGDQGNFTIPVSIGGKNLADR 117
            ALTL SGKALP  HP  P+L +E     A ++   PQ   D     + V I  + +A++
Sbjct: 311 NALTLRSGKALPPTHPNAPTLTKEP----AQIVQGEPQSEQDSEPAEVVVPIPPEQIAEQ 366

BLAST of Moc10g14580 vs. ExPASy TrEMBL
Match: A0A6J1GJ68 (uncharacterized protein LOC111454344 OS=Cucurbita moschata OX=3662 GN=LOC111454344 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.1e-15
Identity = 43/72 (59.72%), Postives = 59/72 (81.94%), Query Frame = 0

Query: 1   MEALMRDYMTKNDALIQSQAATLRNMEVQLGQMAIELKNRP-QRLPCDIENPKKEGNEQC 60
           +E+L+++YM KND +IQSQ A+L+N+EVQ+GQ+A EL+NRP  +LP D E PK+EG EQC
Sbjct: 42  IESLIKEYMAKNDVVIQSQQASLQNLEVQVGQLATELRNRPLGKLPADTETPKREGKEQC 101

Query: 61  QALTLHSGKALP 72
           QA+ L SGK +P
Sbjct: 102 QAIELRSGKKIP 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA3473721.15.2e-2035.65retroelement pol polyprotein-like [Gossypium australe][more]
XP_030495102.16.8e-2037.61uncharacterized protein LOC115710889 [Cannabis sativa][more]
XP_022157917.14.4e-1937.57uncharacterized protein LOC111024527 [Momordica charantia][more]
XP_030505184.11.1e-1727.15uncharacterized protein LOC115720166 [Cannabis sativa][more]
XP_030505532.12.4e-1729.84uncharacterized protein LOC115720524 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5B6VWJ02.5e-2035.65Retroelement pol polyprotein-like OS=Gossypium australe OX=47621 GN=EPI10_024080... [more]
A0A6J1DVS92.1e-1937.57uncharacterized protein LOC111024527 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5B6VKQ87.6e-1735.11Retrovirus-related Pol polyprotein from transposon 17.6 OS=Gossypium australe OX... [more]
A0A6J1DWK13.2e-1545.83uncharacterized protein LOC111025053 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1GJ687.1e-1559.72uncharacterized protein LOC111454344 OS=Cucurbita moschata OX=3662 GN=LOC1114543... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..283

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g14580.1Moc10g14580.1mRNA