Moc10g13790 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g13790
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc CCHC-type-like protein
Locationchr10: 10473385 .. 10474307 (+)
RNA-Seq ExpressionMoc10g13790
SyntenyMoc10g13790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTATCGATTTGTCGGAAGAATGGAAAATTTTCAAGCTAACTTCTAAGGAGGAGGTCATTGTCGACATTGATGCTCCTGCTTCAATAGAAACATGCTCTAATTTGAATTGCAGTCTAGTAGGTAAGCTCTTTCTCAAACGTCCTGTGTTCTTGTCCAGTGTTGAAAAGTACACTATGTATCGCCTGGAAGCTAGACAATGGCTCCTTTTAGTGGAAAATATCGATTGGAATTTATTCCTTTCAACTTCTCTCGGGGCATTCATCGGAATAGAGTCTTTCACACCGGCCCTTGGACTTTTGACAAAGTTGTGCTTATGCTGATTAAGCTAGTCTCCAGAGTTCAGCCTTCAGATCTGGATTTTAACAAACTGGCGATATGGATTCATTTCTTTGATATTCCACTGGATTGTATGAATAAATCAATGGCGCTCAAGTTAGGAAATGTTTTGGGAACCTTTGAAGATGTTGACTGTGATGAATCAGACTGCTGTTGGGGATCCAATCTCAGAATTCGAGTAACGCTGGACATATCCAAACCCCTTAGAAGGGGAATCAAACTCAATCTTGATGGTCCTATGGGAGGTGTTTGGATCCCCATCCAATATGAACGTCTTCCTGACTTCTGTTTTCATTGTGGCAGGGTGGACCATACTATCAAGGATTGTGCTCTGTGTTTTAATAATGAAGGAAACCCCTGTTTGCGCACCAAGCATCCCTATGGACAGTGGCTTTGTTATCAAGGTCCGTTAAGGCAACAATCAACACCCGTGCAGAAGAGTGGTGAACATCCGACTGGAAATTTTGATAGCAACTTGGCCCATTCTGGTACTAAGAACCCGAACGACACAATCAACCAATTAGATTCCCCTTCTCCGGCAGTAGCATCTCCGGCAGGCCCTCCGGTAACAACATCTTAA

mRNA sequence

ATGGCAACTATCGATTTGTCGGAAGAATGGAAAATTTTCAAGCTAACTTCTAAGGAGGAGGTCATTGTCGACATTGATGCTCCTGCTTCAATAGAAACATGCTCTAATTTGAATTGCAGTCTAGTAGGTAAGCTCTTTCTCAAACGTCCTGTGTTCTTGTCCAGTGTTGAAAAGTACACTATAGTCTTTCACACCGGCCCTTGGACTTTTGACAAAGTTGTGCTTATGCTGATTAAGCTAGTCTCCAGAGTTCAGCCTTCAGATCTGGATTTTAACAAACTGGCGATATGGATTCATTTCTTTGATATTCCACTGGATTGTATGAATAAATCAATGGCGCTCAAGTTAGGAAATGTTTTGGGAACCTTTGAAGATGTTGACTGTGATGAATCAGACTGCTGTTGGGGATCCAATCTCAGAATTCGAGTAACGCTGGACATATCCAAACCCCTTAGAAGGGGAATCAAACTCAATCTTGATGGTCCTATGGGAGGTGTTTGGATCCCCATCCAATATGAACGTCTTCCTGACTTCTGTTTTCATTGTGGCAGGGTGGACCATACTATCAAGGATTGTGCTCTGTGTTTTAATAATGAAGGAAACCCCTGTTTGCGCACCAAGCATCCCTATGGACAGTGGCTTTGTTATCAAGGTCCGTTAAGGCAACAATCAACACCCGTGCAGAAGAGTGGTGAACATCCGACTGGAAATTTTGATAGCAACTTGGCCCATTCTGGTACTAAGAACCCGAACGACACAATCAACCAATTAGATTCCCCTTCTCCGGCAGTAGCATCTCCGGCAGGCCCTCCGGTAACAACATCTTAA

Coding sequence (CDS)

ATGGCAACTATCGATTTGTCGGAAGAATGGAAAATTTTCAAGCTAACTTCTAAGGAGGAGGTCATTGTCGACATTGATGCTCCTGCTTCAATAGAAACATGCTCTAATTTGAATTGCAGTCTAGTAGGTAAGCTCTTTCTCAAACGTCCTGTGTTCTTGTCCAGTGTTGAAAAGTACACTATAGTCTTTCACACCGGCCCTTGGACTTTTGACAAAGTTGTGCTTATGCTGATTAAGCTAGTCTCCAGAGTTCAGCCTTCAGATCTGGATTTTAACAAACTGGCGATATGGATTCATTTCTTTGATATTCCACTGGATTGTATGAATAAATCAATGGCGCTCAAGTTAGGAAATGTTTTGGGAACCTTTGAAGATGTTGACTGTGATGAATCAGACTGCTGTTGGGGATCCAATCTCAGAATTCGAGTAACGCTGGACATATCCAAACCCCTTAGAAGGGGAATCAAACTCAATCTTGATGGTCCTATGGGAGGTGTTTGGATCCCCATCCAATATGAACGTCTTCCTGACTTCTGTTTTCATTGTGGCAGGGTGGACCATACTATCAAGGATTGTGCTCTGTGTTTTAATAATGAAGGAAACCCCTGTTTGCGCACCAAGCATCCCTATGGACAGTGGCTTTGTTATCAAGGTCCGTTAAGGCAACAATCAACACCCGTGCAGAAGAGTGGTGAACATCCGACTGGAAATTTTGATAGCAACTTGGCCCATTCTGGTACTAAGAACCCGAACGACACAATCAACCAATTAGATTCCCCTTCTCCGGCAGTAGCATCTCCGGCAGGCCCTCCGGTAACAACATCTTAA

Protein sequence

MATIDLSEEWKIFKLTSKEEVIVDIDAPASIETCSNLNCSLVGKLFLKRPVFLSSVEKYTIVFHTGPWTFDKVVLMLIKLVSRVQPSDLDFNKLAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDISKPLRRGIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTKHPYGQWLCYQGPLRQQSTPVQKSGEHPTGNFDSNLAHSGTKNPNDTINQLDSPSPAVASPAGPPVTTS
Homology
BLAST of Moc10g13790 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 245.0 bits (624), Expect = 7.7e-61
Identity = 137/309 (44.34%), Postives = 177/309 (57.28%), Query Frame = 0

Query: 1   MATIDLSEEWKIFKLTS-KEEVIVDIDAPASIETCSNLNCSLVGKLFLKRPV-------- 60
           MAT DL EEWK FKLTS +EE  +D+DA A   T S L   LVGKLF+KRP+        
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  ---------------------FLSSVEK---YTIVFHTGPWTFDKVVLMLIKLVSRVQPS 120
                                FL S  +      ++ +GPWTFD+ ++++ K V+ + PS
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 DLDFNKLAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDI 180
           +LDF KL IW+ FFD+PL C+ + MA++LGN LG FE+ DCD+ +  WGSNLR+RV LDI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181 SKPLRRGIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTK 240
           SKPLRRGIKLNLDGP+GG WIPIQYERLPDFC+HCG                     R K
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSS-----------------RKK 240

Query: 241 HPYGQWLCYQGPLRQQSTPVQKSGEHPTGNFDSNLAHSGTKNPNDTINQLDSPSPA---V 274
           H YG WL YQG ++  + P  K  +    +   N + S + +P    +Q    +PA   +
Sbjct: 241 HQYGSWLRYQGTVK-PTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAPATGPI 291

BLAST of Moc10g13790 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-55
Identity = 114/251 (45.42%), Postives = 153/251 (60.96%), Query Frame = 0

Query: 1   MATIDLSEEWKIFKLTSKEE-VIVDIDAPASIETCSNLNCSLVGKLFLKRPV-------- 60
           MA  +L EEWK FKLTS+E+ + VDID+ A   T   L  SL+ KL  KR +        
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  -----------FLSSVEKYTI-------------VFHTGPWTFDKVVLMLIKLVSRVQPS 120
                      F   +  + I             +   GPWTFD+ ++++   VS  +P 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 DLDFNKLAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDI 180
           D+DF  +++W+HFFD+ L CMNK+MA +LGN +G FEDV+ + ++ CWGS LR+RV  D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SKPLRRGIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTK 219
            KPL RGIKLNLDGPMGG WIPIQYERLPDF +HCGR+DH +KDC+ C  +  +  L+  
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQ-- 240

BLAST of Moc10g13790 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-51
Identity = 108/246 (43.90%), Postives = 146/246 (59.35%), Query Frame = 0

Query: 5   DLSEEWKIFKLTSKE-EVIVDIDAPASIETCSNLNCSLVGKLFLKR-------------- 64
           +L  +W+ FKLTS+E E+ +D+D  A       L  SLVGKL  KR              
Sbjct: 5   NLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLA 64

Query: 65  -----PVFLSSVEKYTIVFH------------TGPWTFDKVVLMLIKLVSRVQPSDLDFN 124
                 + + S+ K   +FH            TGPW FDK +++L K  S    S+L+FN
Sbjct: 65  WKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFN 124

Query: 125 KLAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDISKPLR 184
           ++A WIH FD+P+  +NK+MA++LGN +G F DVDC+E    WG++LRIRV +DI+KPLR
Sbjct: 125 RVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLR 184

Query: 185 RGIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTKHPYGQ 219
           RGIK+N+DGPMGG WIPIQYERLPDFC+ CG + H+  DC   +    +   R    YG 
Sbjct: 185 RGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDS-RATSEYGP 244

BLAST of Moc10g13790 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 152.5 bits (384), Expect = 5.2e-33
Identity = 87/264 (32.95%), Postives = 136/264 (51.52%), Query Frame = 0

Query: 5   DLSEEWKIFKLTSKEEVIVDIDAPASIETCSNLNCSLVGKLFLKRPVFLSSVEK------ 64
           ++++ W+ FK T+ E   V ID    I T  N+   +V KL   + +   ++        
Sbjct: 3   EITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVW 62

Query: 65  ---------------YTIVF----------HTGPWTFDKVVLMLIKLVSRVQPSDLDFNK 124
                          Y I+F           +GPWTF+K +L+L    +  QP D++FN 
Sbjct: 63  RVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNF 122

Query: 125 LAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDISKPLRR 184
            A WI   +IP +C++  MA  LG  LG  E+++ D +D   G  +R+RV +D+SKPLRR
Sbjct: 123 CAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRR 182

Query: 185 GIKL-NLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTKHP--Y 235
           GIKL N DG    +W P++YE+LPDFC+ CG++ H+ ++C      + +  + T  P  Y
Sbjct: 183 GIKLKNSDGK--DIWCPLRYEKLPDFCYECGKIGHSGREC-----EQRSKVVTTNSPEQY 242

BLAST of Moc10g13790 vs. NCBI nr
Match: XP_028117212.1 (uncharacterized protein LOC114314884 [Camellia sinensis])

HSP 1 Score: 152.1 bits (383), Expect = 6.8e-33
Identity = 90/247 (36.44%), Postives = 126/247 (51.01%), Query Frame = 0

Query: 10  WKIFKLTSKEEVIVDIDAPASIETCSNLNCSLVGKLFLKRPV-------FLSSVEKYT-- 69
           W++  LT +EE  V +D      T +N    LVGKL   RP         L+SV K +  
Sbjct: 10  WRLV-LTEEEEAEVVVDEVHIHSTEANAGLCLVGKLLTMRPFNMDALRSTLTSVWKASKG 69

Query: 70  IVFHT----------------------GPWTFDKVVLMLIKLVSRVQPSDLDFNKLAIWI 129
           +VF T                      GPW+FDK ++ML +    +QPS++ F+ +  W+
Sbjct: 70  VVFKTFGDNLVLIQFGHIVDKRRVMINGPWSFDKQLVMLKEFNRALQPSEITFSTMEFWV 129

Query: 130 HFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDISKPLRRGIKLN 189
           H  ++PL  M + + + LGN LG F D++  +    WG  L IR+ ++I KPLRRG+KL 
Sbjct: 130 HASNLPLISMTRDVGVLLGNTLGKFVDMEYGDGGIAWGRALHIRIEINIDKPLRRGLKLA 189

Query: 190 LDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTKH------PYGQ 220
           L G    VWI +QYERLP+FCFHCG + H++ DC       GN  L   H       YG 
Sbjct: 190 LGG-QEPVWITLQYERLPNFCFHCGLLGHSVHDC-------GNRLLEGAHREEVRLQYGP 247

BLAST of Moc10g13790 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.7e-61
Identity = 137/309 (44.34%), Postives = 177/309 (57.28%), Query Frame = 0

Query: 1   MATIDLSEEWKIFKLTS-KEEVIVDIDAPASIETCSNLNCSLVGKLFLKRPV-------- 60
           MAT DL EEWK FKLTS +EE  +D+DA A   T S L   LVGKLF+KRP+        
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  ---------------------FLSSVEK---YTIVFHTGPWTFDKVVLMLIKLVSRVQPS 120
                                FL S  +      ++ +GPWTFD+ ++++ K V+ + PS
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 DLDFNKLAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDI 180
           +LDF KL IW+ FFD+PL C+ + MA++LGN LG FE+ DCD+ +  WGSNLR+RV LDI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181 SKPLRRGIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTK 240
           SKPLRRGIKLNLDGP+GG WIPIQYERLPDFC+HCG                     R K
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSS-----------------RKK 240

Query: 241 HPYGQWLCYQGPLRQQSTPVQKSGEHPTGNFDSNLAHSGTKNPNDTINQLDSPSPA---V 274
           H YG WL YQG ++  + P  K  +    +   N + S + +P    +Q    +PA   +
Sbjct: 241 HQYGSWLRYQGTVK-PTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAPATGPI 291

BLAST of Moc10g13790 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 8.1e-56
Identity = 114/251 (45.42%), Postives = 153/251 (60.96%), Query Frame = 0

Query: 1   MATIDLSEEWKIFKLTSKEE-VIVDIDAPASIETCSNLNCSLVGKLFLKRPV-------- 60
           MA  +L EEWK FKLTS+E+ + VDID+ A   T   L  SL+ KL  KR +        
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  -----------FLSSVEKYTI-------------VFHTGPWTFDKVVLMLIKLVSRVQPS 120
                      F   +  + I             +   GPWTFD+ ++++   VS  +P 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 DLDFNKLAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDI 180
           D+DF  +++W+HFFD+ L CMNK+MA +LGN +G FEDV+ + ++ CWGS LR+RV  D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SKPLRRGIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTK 219
            KPL RGIKLNLDGPMGG WIPIQYERLPDF +HCGR+DH +KDC+ C  +  +  L+  
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQ-- 240

BLAST of Moc10g13790 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51
Identity = 108/246 (43.90%), Postives = 146/246 (59.35%), Query Frame = 0

Query: 5   DLSEEWKIFKLTSKE-EVIVDIDAPASIETCSNLNCSLVGKLFLKR-------------- 64
           +L  +W+ FKLTS+E E+ +D+D  A       L  SLVGKL  KR              
Sbjct: 5   NLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLA 64

Query: 65  -----PVFLSSVEKYTIVFH------------TGPWTFDKVVLMLIKLVSRVQPSDLDFN 124
                 + + S+ K   +FH            TGPW FDK +++L K  S    S+L+FN
Sbjct: 65  WKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFN 124

Query: 125 KLAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDISKPLR 184
           ++A WIH FD+P+  +NK+MA++LGN +G F DVDC+E    WG++LRIRV +DI+KPLR
Sbjct: 125 RVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLR 184

Query: 185 RGIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTKHPYGQ 219
           RGIK+N+DGPMGG WIPIQYERLPDFC+ CG + H+  DC   +    +   R    YG 
Sbjct: 185 RGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDS-RATSEYGP 244

BLAST of Moc10g13790 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.5e-33
Identity = 87/264 (32.95%), Postives = 136/264 (51.52%), Query Frame = 0

Query: 5   DLSEEWKIFKLTSKEEVIVDIDAPASIETCSNLNCSLVGKLFLKRPVFLSSVEK------ 64
           ++++ W+ FK T+ E   V ID    I T  N+   +V KL   + +   ++        
Sbjct: 3   EITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVW 62

Query: 65  ---------------YTIVF----------HTGPWTFDKVVLMLIKLVSRVQPSDLDFNK 124
                          Y I+F           +GPWTF+K +L+L    +  QP D++FN 
Sbjct: 63  RVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNF 122

Query: 125 LAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDISKPLRR 184
            A WI   +IP +C++  MA  LG  LG  E+++ D +D   G  +R+RV +D+SKPLRR
Sbjct: 123 CAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRR 182

Query: 185 GIKL-NLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFNNEGNPCLRTKHP--Y 235
           GIKL N DG    +W P++YE+LPDFC+ CG++ H+ ++C      + +  + T  P  Y
Sbjct: 183 GIKLKNSDGK--DIWCPLRYEKLPDFCYECGKIGHSGREC-----EQRSKVVTTNSPEQY 242

BLAST of Moc10g13790 vs. ExPASy TrEMBL
Match: A0A2K3MPT1 (Cysteine desulfurase mitochondrial-like OS=Trifolium pratense OX=57577 GN=L195_g015850 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-30
Identity = 61/133 (45.86%), Postives = 95/133 (71.43%), Query Frame = 0

Query: 61  IVFHTGPWTFDKVVLMLIKLVSRVQPSDLDFNKLAIWIHFFDIPLDCMNKSMALKLGNVL 120
           +V+ TGPW+FD+ +L+L ++    QPS+L+ ++++ W+  +D+PL   ++ MA KLGN+L
Sbjct: 85  LVWKTGPWSFDRNLLILNRISGNEQPSELEMDRVSFWVRVYDLPLKLRSEGMAKKLGNIL 144

Query: 121 GTFEDVDCDESDC-CWGSNLRIRVTLDISKPLRRGIKLNLDGPMGGVWIPIQYERLPDFC 180
           GTFE++D    DC   G  LRIRV++D+ KPL+RG KL+  G    +W+  +YERLP+FC
Sbjct: 145 GTFEEMDM--KDCNRMGKFLRIRVSMDLRKPLKRGSKLSFQGK--DIWVDYKYERLPNFC 204

Query: 181 FHCGRVDHTIKDC 193
           F CGR+ H ++DC
Sbjct: 205 FACGRIGHQMRDC 213

BLAST of Moc10g13790 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 32/133 (24.06%), Postives = 61/133 (45.86%), Query Frame = 0

Query: 67  PWTFDKVVLMLIKLVSRVQPSDLDFNKLAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDV 126
           PW F++  + L +         L F  + +W+H   IPL  +++     + + LG    +
Sbjct: 96  PWVFNEWFIALQRWEDFPTEDFLTF--IDVWVHIRGIPLPYVSERTVEIIASTLGEVVAM 155

Query: 127 DCDESDCCWGSNLRIRVTLDISKPLRRGIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVD 186
           D +E      + +R++V +D ++PLR   ++          I  +YE+L   C +C RV+
Sbjct: 156 DFNEETTSQITFIRVKVRMDFTEPLRFFRRVRF-ASRERAMIGFEYEKLQRVCTNCCRVN 215

Query: 187 HTIKDCALCFNNE 200
           H +  C    + E
Sbjct: 216 HQVSHCPYVVHQE 225

BLAST of Moc10g13790 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 50.1 bits (118), Expect = 3.4e-06
Identity = 45/216 (20.83%), Postives = 75/216 (34.72%), Query Frame = 0

Query: 36  NLNCSLVGKL--FLKRPVFLSSVEKYTIVFHTGPWTFDKVVLMLIKLVSRVQPSDLDFNK 95
           N++  +VG++    K      S E    +   GPW+F+  + ++ +       SD +F +
Sbjct: 47  NVDEEVVGRILEIHKIEFLFQSEESMFSILRRGPWSFNDWMCVIQRWTK--LHSDAEFKR 106

Query: 96  LAIWIHFFDIPLDCMNKSMALKLGNVLGTFEDVDCDESDCCWGSNLRIRVTLDISKPLRR 155
           +  WI    IPL  +   +   +G  +G F               L   +  D+S     
Sbjct: 107 IPFWIQIRGIPLRFLTARIITSIGERMGLF---------------LETNLGRDVSV---- 166

Query: 156 GIKLNLDGPMGGVWIPIQYERLPDFCFHCGRVDHTIKDCALCFN---------------- 215
                         +  QYE+L +FC  CG + H   +C    N                
Sbjct: 167 --------------LKFQYEKLKNFCTTCGMLSHDASECPTSGNQGPHADDDDDDDDNDA 223

Query: 216 NEGNPCLRTKHPYGQWLCYQGPLRQQSTPVQKSGEH 234
           NE +P +   +P        GP+ QQ        EH
Sbjct: 227 NEDHPDVPGDNPDQ----VHGPMNQQHPEESTEDEH 223

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158377.17.7e-6144.34uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_022132681.11.7e-5545.42uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022156185.14.2e-5143.90uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022149484.15.2e-3332.95uncharacterized protein LOC111017902 [Momordica charantia][more]
XP_028117212.16.8e-3336.44uncharacterized protein LOC114314884 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DX303.7e-6144.34uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1BSZ18.1e-5645.42uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DU552.1e-5143.90uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1D7652.5e-3332.95uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A2K3MPT12.6e-3045.86Cysteine desulfurase mitochondrial-like OS=Trifolium pratense OX=57577 GN=L195_g... [more]
Match NameE-valueIdentityDescription
AT5G36228.11.6e-0824.06nucleic acid binding;zinc ion binding [more]
AT3G42140.13.4e-0620.83zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 53..143
e-value: 1.2E-13
score: 50.8
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 145..193
e-value: 5.3E-12
score: 45.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..275
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 64..231
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 64..231
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 179..192
score: 8.614303

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g13790.1Moc10g13790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding