Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCACTTCTGCATCCAAAGAAGATTGATCAGAGGTTTTGGGGTCGGTAAGCAGGAGGTTGAAGTCTCTCACCTACAGTATGCAAACGACACTATGATCTTCTGCCCAAACGAACACGGTTTGCTTGATAAAGGGTGGATGGTATTGGATATATTCCTTAATGCTTCAGGTTTGTCTTTGAACTTGAGTAAAACTTCTATAATTGGGATTCATGTGGAGGAAGACATCCTTCAGAATATGGCAAAGAGCTTGGGCTGTAAAGTGGAGAAACTTCCGGTGTCCTACTTGGGCATTCCCCTGGGAGGTAATTTTAAGAAGAAATCGTTTTGGGAACCTCTTATTGACAGAGTGAAGAAGAGAATTGAAAAGTGGAAGAATCTCCTTCTTTCGAAAGGGGGAAGGTTAACTCTAGCTCAGTCGGTTATTACCAGTTTACCCCTCTATTTTTTCTCTATTCTAAAAGCTCCGAAAGGGGTTGTTAAGGAGATAGAGAGGTTGACTAGAAACTTCTTCTGGAACGGAGGAACTCTTAAAGGGGCTTGCACCCACCTGGTAAATTGGGGGAAAACAGGCCTCCCCTTGCAATGTGGTGGGCTTGGTATAGGGGCTCTACAGCAGCAGAATAATAGCCTCCTTCTAAAGTGGCTTTGGAGATTCACTCAAGAACCACACGCCTTATGGAGGAGAGTGATAGTCAGTATTTATGGTGAGGACAAATACGGATGGGGTACTCTCCCTCCCAAAGGTAGTGCTAGAGGCAGACCGTGGCATGAGATCGCCAAAAATAGTACCTTCTTCTTCAAGTTTCTGAGTTTCAAAGTGCAGAACGAGACTCGTATTAAATTCTGGCTGGACACTTGGGTTGAAGAAAGGCCCCTCAAGGATAGGTTCCCTGATCTGTTTAATACTTCCACGAAAAAAGAGGCCATGGTTGCTGCCTGCTGGAATGGAAGTGGGAATGACTGGGATTTGGGCTTCCGAAGAGGCCTTTTTGATTGGGAAGTTGATAGCTGGATCAACCTTATTCAGACGATAGATGTGGTGAGGCTTGGGGAAGGAGAAGACCATGTTGTTTGGTCTCTAGGAAAAAACGGGCTTTTTTCTACTCGTACTGCGAGGATAAAAATGGGGGAGTGCAACCCTTCTTTAAGATCTCCTCTCATCTCGGCGGTTTGGAATTTCAAAGCTCCAAAGAAGGGCTAA
mRNA sequence
ATGGTCCACTTCTGCATCCAAAGAAGATTGATCAGAGGTTTTGGGGTCGGTAAGCAGGAGGTTGAAGTCTCTCACCTACAGTATGCAAACGACACTATGATCTTCTGCCCAAACGAACACGGTTTGCTTGATAAAGGGTGGATGGTATTGGATATATTCCTTAATGCTTCAGGTTTGTCTTTGAACTTGAGTAAAACTTCTATAATTGGGATTCATGTGGAGGAAGACATCCTTCAGAATATGGCAAAGAGCTTGGGCTGTAAAGTGGAGAAACTTCCGGTGTCCTACTTGGGCATTCCCCTGGGAGGTAATTTTAAGAAGAAATCGTTTTGGGAACCTCTTATTGACAGAGTGAAGAAGAGAATTGAAAAGTGGAAGAATCTCCTTCTTTCGAAAGGGGGAAGGTTAACTCTAGCTCAGTCGGTTATTACCAGTTTACCCCTCTATTTTTTCTCTATTCTAAAAGCTCCGAAAGGGGTTGTTAAGGAGATAGAGAGGTTGACTAGAAACTTCTTCTGGAACGGAGGAACTCTTAAAGGGGCTTGCACCCACCTGGTAAATTGGGGGAAAACAGGCCTCCCCTTGCAATGTGGTGGGCTTGGTATAGGGGCTCTACAGCAGCAGAATAATAGCCTCCTTCTAAAGTGGCTTTGGAGATTCACTCAAGAACCACACGCCTTATGGAGGAGAGTGATAGTCAGTATTTATGGTGAGGACAAATACGGATGGGGTACTCTCCCTCCCAAAGGTAGTGCTAGAGGCAGACCGTGGCATGAGATCGCCAAAAATAGTACCTTCTTCTTCAAGTTTCTGAGTTTCAAAGTGCAGAACGAGACTCGTATTAAATTCTGGCTGGACACTTGGGTTGAAGAAAGGCCCCTCAAGGATAGGTTCCCTGATCTGTTTAATACTTCCACGAAAAAAGAGGCCATGGTTGCTGCCTGCTGGAATGGAAGTGGGAATGACTGGGATTTGGGCTTCCGAAGAGGCCTTTTTGATTGGGAAGTTGATAGCTGGATCAACCTTATTCAGACGATAGATGTGGTGAGGCTTGGGGAAGGAGAAGACCATGTTGTTTGGTCTCTAGGAAAAAACGGGCTTTTTTCTACTCGTACTGCGAGGATAAAAATGGGGGAGTGCAACCCTTCTTTAAGATCTCCTCTCATCTCGGCGGTTTGGAATTTCAAAGCTCCAAAGAAGGGCTAA
Coding sequence (CDS)
ATGGTCCACTTCTGCATCCAAAGAAGATTGATCAGAGGTTTTGGGGTCGGTAAGCAGGAGGTTGAAGTCTCTCACCTACAGTATGCAAACGACACTATGATCTTCTGCCCAAACGAACACGGTTTGCTTGATAAAGGGTGGATGGTATTGGATATATTCCTTAATGCTTCAGGTTTGTCTTTGAACTTGAGTAAAACTTCTATAATTGGGATTCATGTGGAGGAAGACATCCTTCAGAATATGGCAAAGAGCTTGGGCTGTAAAGTGGAGAAACTTCCGGTGTCCTACTTGGGCATTCCCCTGGGAGGTAATTTTAAGAAGAAATCGTTTTGGGAACCTCTTATTGACAGAGTGAAGAAGAGAATTGAAAAGTGGAAGAATCTCCTTCTTTCGAAAGGGGGAAGGTTAACTCTAGCTCAGTCGGTTATTACCAGTTTACCCCTCTATTTTTTCTCTATTCTAAAAGCTCCGAAAGGGGTTGTTAAGGAGATAGAGAGGTTGACTAGAAACTTCTTCTGGAACGGAGGAACTCTTAAAGGGGCTTGCACCCACCTGGTAAATTGGGGGAAAACAGGCCTCCCCTTGCAATGTGGTGGGCTTGGTATAGGGGCTCTACAGCAGCAGAATAATAGCCTCCTTCTAAAGTGGCTTTGGAGATTCACTCAAGAACCACACGCCTTATGGAGGAGAGTGATAGTCAGTATTTATGGTGAGGACAAATACGGATGGGGTACTCTCCCTCCCAAAGGTAGTGCTAGAGGCAGACCGTGGCATGAGATCGCCAAAAATAGTACCTTCTTCTTCAAGTTTCTGAGTTTCAAAGTGCAGAACGAGACTCGTATTAAATTCTGGCTGGACACTTGGGTTGAAGAAAGGCCCCTCAAGGATAGGTTCCCTGATCTGTTTAATACTTCCACGAAAAAAGAGGCCATGGTTGCTGCCTGCTGGAATGGAAGTGGGAATGACTGGGATTTGGGCTTCCGAAGAGGCCTTTTTGATTGGGAAGTTGATAGCTGGATCAACCTTATTCAGACGATAGATGTGGTGAGGCTTGGGGAAGGAGAAGACCATGTTGTTTGGTCTCTAGGAAAAAACGGGCTTTTTTCTACTCGTACTGCGAGGATAAAAATGGGGGAGTGCAACCCTTCTTTAAGATCTCCTCTCATCTCGGCGGTTTGGAATTTCAAAGCTCCAAAGAAGGGCTAA
Protein sequence
MVHFCIQRRLIRGFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIGIHVEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSKGGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTGLPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGTLPPKGSARGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLFNTSTKKEAMVAACWNGSGNDWDLGFRRGLFDWEVDSWINLIQTIDVVRLGEGEDHVVWSLGKNGLFSTRTARIKMGECNPSLRSPLISAVWNFKAPKKG
Homology
BLAST of Moc10g12190 vs. NCBI nr
Match:
XP_022158566.1 (uncharacterized protein LOC111025019 [Momordica charantia])
HSP 1 Score: 326.6 bits (836), Expect = 2.9e-85
Identity = 149/333 (44.74%), Postives = 204/333 (61.26%), Query Frame = 0
Query: 1 MVHFCIQRRLIRGFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLS 60
+V+FC +RR+I+GF VG++ + VSHL+YA+DT+IFCP G LD+ W ++ +F+ SGL
Sbjct: 72 LVNFCCERRIIQGFAVGRERIVVSHLRYADDTIIFCPAYKGNLDRWWALISLFIKGSGLR 131
Query: 61 LNLSKTSIIGIHVEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKK 120
+NL+KTS+IGI++ E+ + +GC+VE++ YLG+PLGGN + FW L++
Sbjct: 132 INLAKTSLIGINIGENEATSKVDKIGCRVERMSFRYLGLPLGGNHRVIVFWRHLVE---- 191
Query: 121 RIEKWKNLLLSKGGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKG 180
KAP + KE+ ++ R+ FW+G T G
Sbjct: 192 ----------------------------------KAPVSITKEMNKIVRDLFWSGATSHG 251
Query: 181 ACTHLVNWGKTGLPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDK 240
C +LV W + LP++ GGLGIGA +NN+LL+KWLW FT+E +ALWRRVI SIYG DK
Sbjct: 252 -CKNLVKWDISSLPMKLGGLGIGAFPPKNNALLMKWLWHFTREENALWRRVIASIYGVDK 311
Query: 241 YGWGTLPPKGSARGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPD 300
YGW T PKG A+GRPW +IAKN + F + + FK R+ FW+D W PL D FPD
Sbjct: 312 YGWLTKAPKGKAKGRPWFDIAKNLSAFQEMVVFKANQGDRLSFWMDKWAGNLPLLDEFPD 365
Query: 301 LFNTSTKKEAMVAACWNGSGNDWDLGFRRGLFD 334
+F S K+ A V CWN WDL RRGLFD
Sbjct: 372 MFALSLKQNAYVKDCWNEENQTWDLALRRGLFD 365
BLAST of Moc10g12190 vs. NCBI nr
Match:
VVA25489.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 310.1 bits (793), Expect = 2.8e-80
Identity = 148/391 (37.85%), Postives = 224/391 (57.29%), Query Frame = 0
Query: 13 GFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIGIH 72
G G VE+SHLQ+A+DT+ F ++ + +L++F SG+++N SK S++GI+
Sbjct: 483 GLSPGNGMVEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTINKSKCSLVGIN 542
Query: 73 VEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSK 132
+++ ++ MA + GC V P+ YLG+PLGGN + FW+P++++V+ R++KWK LSK
Sbjct: 543 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 602
Query: 133 GGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTG 192
GGRLT+ Q+V+ S+P+Y+ S+ + P GV IE+L R+F W G L G H V+W G
Sbjct: 603 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEG--LDGKSNHAVSWEVVG 662
Query: 193 LPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGTLPPKGSA 252
CGGLG+G+L+ ++ +L KWLWRF EPHALW +VI SIYG D GW P +
Sbjct: 663 KAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGS 722
Query: 253 RGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLFNTSTKKEAMV 312
PW +I+ F + F V + R++FW D W LK+ FP LFN S K+ +
Sbjct: 723 CRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNI 782
Query: 313 AACWNGSG--NDWDLGFRRGLFDWEVDSWINLIQTIDVVRLGEGE-DHVVWSLGKNGLFS 372
++ + G WD GFRR L + E+ L+ ++ VRL D +W +GLF+
Sbjct: 783 SSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFT 842
Query: 373 TRTARIKMGECNPSLRSPLISAVWNFKAPKK 401
+ + C P + +W K P K
Sbjct: 843 CHSLCSHIQNCGEGETFPPYTQIWKAKTPLK 871
BLAST of Moc10g12190 vs. NCBI nr
Match:
BBN69746.1 (VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 308.9 bits (790), Expect = 6.3e-80
Identity = 148/391 (37.85%), Postives = 224/391 (57.29%), Query Frame = 0
Query: 13 GFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIGIH 72
G G VE+SHLQ+A+DT+ F ++ + +L++F SG+++N SK S++GI+
Sbjct: 426 GLSPGNGMVEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTINKSKCSLVGIN 485
Query: 73 VEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSK 132
+++ ++ MA + GC V P+ YLG+PLGGN + FW+P++++V+ R++KWK LSK
Sbjct: 486 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 545
Query: 133 GGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTG 192
GGRLT+ Q+V+ S+P+Y+ S+ + P GV IE+L R+F W G L G H V+W G
Sbjct: 546 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEG--LDGKSNHAVSWEVVG 605
Query: 193 LPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGTLPPKGSA 252
CGGLG+G+L+ ++ +L KWLWRF EPHALW +VI SIYG D GW P +
Sbjct: 606 KAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGS 665
Query: 253 RGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLFNTSTKKEAMV 312
PW +I+ F + F V + R++FW D W LK+ FP LFN S K+ +
Sbjct: 666 CRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNI 725
Query: 313 AACWNGSG--NDWDLGFRRGLFDWEVDSWINLIQTIDVVRLGEGE-DHVVWSLGKNGLFS 372
++ + G WD GFRR L + E+ L+ ++ VRL D +W +GLF+
Sbjct: 726 SSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFT 785
Query: 373 TRTARIKMGECNPSLRSPLISAVWNFKAPKK 401
+ + C P + +W K P K
Sbjct: 786 CHSFCSHIQNCGEGEIFPPYTQIWKAKTPLK 814
BLAST of Moc10g12190 vs. NCBI nr
Match:
BBN67784.1 (VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 308.9 bits (790), Expect = 6.3e-80
Identity = 148/391 (37.85%), Postives = 224/391 (57.29%), Query Frame = 0
Query: 13 GFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIGIH 72
G G VE+SHLQ+A+DT+ F ++ + +L++F SG+++N SK S++GI+
Sbjct: 1133 GLSPGNGMVEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTINKSKCSLVGIN 1192
Query: 73 VEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSK 132
+++ ++ MA + GC V P+ YLG+PLGGN + FW+P++++V+ R++KWK LSK
Sbjct: 1193 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 1252
Query: 133 GGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTG 192
GGRLT+ Q+V+ S+P+Y+ S+ + P GV IE+L R+F W G L G H V+W G
Sbjct: 1253 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEG--LDGKSNHAVSWEVVG 1312
Query: 193 LPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGTLPPKGSA 252
CGGLG+G+L+ ++ +L KWLWRF EPHALW +VI SIYG D GW P +
Sbjct: 1313 KAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGS 1372
Query: 253 RGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLFNTSTKKEAMV 312
PW +I+ F + F V + R++FW D W LK+ FP LFN S K+ +
Sbjct: 1373 CRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNI 1432
Query: 313 AACWNGSG--NDWDLGFRRGLFDWEVDSWINLIQTIDVVRLGEGE-DHVVWSLGKNGLFS 372
++ + G WD GFRR L + E+ L+ ++ VRL D +W +GLF+
Sbjct: 1433 SSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFT 1492
Query: 373 TRTARIKMGECNPSLRSPLISAVWNFKAPKK 401
+ + C P + +W K P K
Sbjct: 1493 CHSFCSHIQNCGEGEIFPPYTQIWKAKTPLK 1521
BLAST of Moc10g12190 vs. NCBI nr
Match:
BBG98819.1 (VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 308.9 bits (790), Expect = 6.3e-80
Identity = 148/391 (37.85%), Postives = 224/391 (57.29%), Query Frame = 0
Query: 13 GFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIGIH 72
G G VE+SHLQ+A+DT+ F ++ + +L++F SG+++N SK S++GI+
Sbjct: 359 GLSPGNGMVEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTINKSKCSLVGIN 418
Query: 73 VEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSK 132
+++ ++ MA + GC V P+ YLG+PLGGN + FW+P++++V+ R++KWK LSK
Sbjct: 419 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 478
Query: 133 GGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTG 192
GGRLT+ Q+V+ S+P+Y+ S+ + P GV IE+L R+F W G L G H V+W G
Sbjct: 479 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEG--LDGKSNHAVSWEVVG 538
Query: 193 LPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGTLPPKGSA 252
CGGLG+G+L+ ++ +L KWLWRF EPHALW +VI SIYG D GW P +
Sbjct: 539 KAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGS 598
Query: 253 RGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLFNTSTKKEAMV 312
PW +I+ F + F V + R++FW D W LK+ FP LFN S K+ +
Sbjct: 599 CRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNI 658
Query: 313 AACWNGSG--NDWDLGFRRGLFDWEVDSWINLIQTIDVVRLGEGE-DHVVWSLGKNGLFS 372
++ + G WD GFRR L + E+ L+ ++ VRL D +W +GLF+
Sbjct: 659 SSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFT 718
Query: 373 TRTARIKMGECNPSLRSPLISAVWNFKAPKK 401
+ + C P + +W K P K
Sbjct: 719 CHSFCSHIQNCGEGEIFPPYTQIWKAKTPLK 747
BLAST of Moc10g12190 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 120.2 bits (300), Expect = 5.5e-26
Identity = 83/300 (27.67%), Postives = 144/300 (48.00%), Query Frame = 0
Query: 107 KKSFWEPLIDRVKKRIEKWKNLLLSKGGRLTLAQSVITSLPLYFFSILKAPKGVVKEIER 166
K +F E +++RV R+ W+ LS GRLTL ++V++S+P++ S + P+ ++ +++
Sbjct: 10 KDTFGE-ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQ 69
Query: 167 LTRNFFWNGGTLKGACTHLVNWGKTGLPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHA 226
L+R F W G T + HLV W K P + GGLG+ A + N +L+ K WR QE ++
Sbjct: 70 LSRTFLW-GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNS 129
Query: 227 LWRRVIVSIY--GEDKYG-WGTLPPKGSARGRPWHEIAKNSTFFFKF-LSFKVQNETRIK 286
LW V+ Y GE + W L PKGS W IA + + + +I+
Sbjct: 130 LWTLVLQKKYHVGEIRDSRW--LIPKGS-WSSTWRSIAIGLRDVVSHGVGWIPGDGQQIR 189
Query: 287 FWLDTWVEERPLKDRFPDLFNTSTKKEAMVAACWNGSGNDWDLGFRRGLFDWEVDSWINL 346
FW D WV +PL + D T + +VA G WD + + ++
Sbjct: 190 FWTDRWVSGKPLLEL--DNGERPTDCDTVVAKDLWIPGRGWDFA---KIDPYTTNNTRLE 249
Query: 347 IQTIDVVRLGEGEDHVVWSLGKNGLFSTRTA--RIKMGECNPSLRSPLISAVWNFKAPKK 401
++ + + + D + W ++G FS R+A + + E + + +W + P++
Sbjct: 250 LRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPER 299
BLAST of Moc10g12190 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 1.3e-11
Identity = 49/190 (25.79%), Postives = 86/190 (45.26%), Query Frame = 0
Query: 7 QRRLIRGFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKT 66
Q + I+G +GK+EV++S +A+D +++ N ++ F SG +N+ K+
Sbjct: 681 QEKEIKGIQLGKEEVKLS--LFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKS 740
Query: 67 SIIGIHVEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKK--KSFWEPLIDRVKKRIEK 126
+ + L + + YLGI L + K K ++PL+ +K+ K
Sbjct: 741 QAFLYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNK 800
Query: 127 WKNLLLSKGGRLTLAQSVITSLPLYFFSI--LKAPKGVVKEIERLTRNFFWNGGTLKGAC 186
WKN+ S GR+ + + I +Y F+ +K P E+E+ T F WN + A
Sbjct: 801 WKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAK 860
Query: 187 THLVNWGKTG 193
+ L K G
Sbjct: 861 SILSQKNKAG 868
BLAST of Moc10g12190 vs. ExPASy TrEMBL
Match:
A0A6J1E196 (uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025019 PE=4 SV=1)
HSP 1 Score: 326.6 bits (836), Expect = 1.4e-85
Identity = 149/333 (44.74%), Postives = 204/333 (61.26%), Query Frame = 0
Query: 1 MVHFCIQRRLIRGFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLS 60
+V+FC +RR+I+GF VG++ + VSHL+YA+DT+IFCP G LD+ W ++ +F+ SGL
Sbjct: 72 LVNFCCERRIIQGFAVGRERIVVSHLRYADDTIIFCPAYKGNLDRWWALISLFIKGSGLR 131
Query: 61 LNLSKTSIIGIHVEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKK 120
+NL+KTS+IGI++ E+ + +GC+VE++ YLG+PLGGN + FW L++
Sbjct: 132 INLAKTSLIGINIGENEATSKVDKIGCRVERMSFRYLGLPLGGNHRVIVFWRHLVE---- 191
Query: 121 RIEKWKNLLLSKGGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKG 180
KAP + KE+ ++ R+ FW+G T G
Sbjct: 192 ----------------------------------KAPVSITKEMNKIVRDLFWSGATSHG 251
Query: 181 ACTHLVNWGKTGLPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDK 240
C +LV W + LP++ GGLGIGA +NN+LL+KWLW FT+E +ALWRRVI SIYG DK
Sbjct: 252 -CKNLVKWDISSLPMKLGGLGIGAFPPKNNALLMKWLWHFTREENALWRRVIASIYGVDK 311
Query: 241 YGWGTLPPKGSARGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPD 300
YGW T PKG A+GRPW +IAKN + F + + FK R+ FW+D W PL D FPD
Sbjct: 312 YGWLTKAPKGKAKGRPWFDIAKNLSAFQEMVVFKANQGDRLSFWMDKWAGNLPLLDEFPD 365
Query: 301 LFNTSTKKEAMVAACWNGSGNDWDLGFRRGLFD 334
+F S K+ A V CWN WDL RRGLFD
Sbjct: 372 MFALSLKQNAYVKDCWNEENQTWDLALRRGLFD 365
BLAST of Moc10g12190 vs. ExPASy TrEMBL
Match:
A0A803P465 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 322.0 bits (824), Expect = 3.5e-84
Identity = 174/403 (43.18%), Postives = 241/403 (59.80%), Query Frame = 0
Query: 11 IRGFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIG 70
I GF VGK+ V+VSHLQ+A+DT+ F NE L K V++ F SGL +NLSK+ ++G
Sbjct: 1370 ISGFLVGKERVQVSHLQFADDTIFFVENEQS-LHKLLRVVEAFCAISGLKINLSKSQLLG 1429
Query: 71 IHVEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLL 130
I ++E+I+ +A+ +GC+V P+ YLG+PLGG+ +K SFWEP++D+ KR++ WK L
Sbjct: 1430 ICMDEEIVSRLARRIGCEVGSWPLQYLGMPLGGSPRKWSFWEPVMDKCAKRLDGWKCAFL 1489
Query: 131 SKGGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGK 190
SKGGRLTL QSV++SLPLYF S+ KAP+ V K +E++ R+F W G G HLV W +
Sbjct: 1490 SKGGRLTLIQSVLSSLPLYFLSLFKAPRSVTKALEKMMRDFLWEGSESSGG-EHLVAWDE 1549
Query: 191 TGLPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGT----- 250
P GGLGIG L+ +N SLL+KWLWRF E ++LW RV+VS YG W +
Sbjct: 1550 VCRPRHEGGLGIGRLELRNKSLLMKWLWRFPLEQNSLWHRVVVSRYGRADNLWDSKKGSR 1609
Query: 251 LPPKGSARGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLF--- 310
L PKG PW +I+ F + FK+ RI+FW D W+++ PL FPDL
Sbjct: 1610 LSPKG-----PWRDISDLYDEFLGLVHFKLGRGDRIRFWEDVWIDDYPLVSAFPDLAVIS 1669
Query: 311 ---NTSTKKEAMVAACWNGSGNDWDLGFRRGLFDWEVDSWINLIQTIDVVR-LGEGEDHV 370
NT K+ + G W+ FRR L D E+ S I+L+Q ++ VR L ED
Sbjct: 1670 EGRNTPIKELIVDEGLPGGWVESWNFKFRRNLMDRELPSLISLMQKVEHVRVLSISEDSR 1729
Query: 371 VWSLGKNGLFSTRTARIKMGECNPSLR-SPLISAVWNFKAPKK 401
+W +G+FS ++A M NPS R ++W AP K
Sbjct: 1730 IWKPDPSGVFSCKSAFSWM-VSNPSFRVLDWTKSLWKSCAPSK 1764
BLAST of Moc10g12190 vs. ExPASy TrEMBL
Match:
A0A5E4FED8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035166 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80
Identity = 148/391 (37.85%), Postives = 224/391 (57.29%), Query Frame = 0
Query: 13 GFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIGIH 72
G G VE+SHLQ+A+DT+ F ++ + +L++F SG+++N SK S++GI+
Sbjct: 483 GLSPGNGMVEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTINKSKCSLVGIN 542
Query: 73 VEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSK 132
+++ ++ MA + GC V P+ YLG+PLGGN + FW+P++++V+ R++KWK LSK
Sbjct: 543 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 602
Query: 133 GGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTG 192
GGRLT+ Q+V+ S+P+Y+ S+ + P GV IE+L R+F W G L G H V+W G
Sbjct: 603 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEG--LDGKSNHAVSWEVVG 662
Query: 193 LPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGTLPPKGSA 252
CGGLG+G+L+ ++ +L KWLWRF EPHALW +VI SIYG D GW P +
Sbjct: 663 KAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGS 722
Query: 253 RGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLFNTSTKKEAMV 312
PW +I+ F + F V + R++FW D W LK+ FP LFN S K+ +
Sbjct: 723 CRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNI 782
Query: 313 AACWNGSG--NDWDLGFRRGLFDWEVDSWINLIQTIDVVRLGEGE-DHVVWSLGKNGLFS 372
++ + G WD GFRR L + E+ L+ ++ VRL D +W +GLF+
Sbjct: 783 SSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFT 842
Query: 373 TRTARIKMGECNPSLRSPLISAVWNFKAPKK 401
+ + C P + +W K P K
Sbjct: 843 CHSLCSHIQNCGEGETFPPYTQIWKAKTPLK 871
BLAST of Moc10g12190 vs. ExPASy TrEMBL
Match:
A0A4Y1R3V4 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1)
HSP 1 Score: 308.9 bits (790), Expect = 3.1e-80
Identity = 148/391 (37.85%), Postives = 224/391 (57.29%), Query Frame = 0
Query: 13 GFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIGIH 72
G G VE+SHLQ+A+DT+ F ++ + +L++F SG+++N SK S++GI+
Sbjct: 359 GLSPGNGMVEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTINKSKCSLVGIN 418
Query: 73 VEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSK 132
+++ ++ MA + GC V P+ YLG+PLGGN + FW+P++++V+ R++KWK LSK
Sbjct: 419 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 478
Query: 133 GGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTG 192
GGRLT+ Q+V+ S+P+Y+ S+ + P GV IE+L R+F W G L G H V+W G
Sbjct: 479 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEG--LDGKSNHAVSWEVVG 538
Query: 193 LPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGTLPPKGSA 252
CGGLG+G+L+ ++ +L KWLWRF EPHALW +VI SIYG D GW P +
Sbjct: 539 KAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGS 598
Query: 253 RGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLFNTSTKKEAMV 312
PW +I+ F + F V + R++FW D W LK+ FP LFN S K+ +
Sbjct: 599 CRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNI 658
Query: 313 AACWNGSG--NDWDLGFRRGLFDWEVDSWINLIQTIDVVRLGEGE-DHVVWSLGKNGLFS 372
++ + G WD GFRR L + E+ L+ ++ VRL D +W +GLF+
Sbjct: 659 SSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFT 718
Query: 373 TRTARIKMGECNPSLRSPLISAVWNFKAPKK 401
+ + C P + +W K P K
Sbjct: 719 CHSFCSHIQNCGEGEIFPPYTQIWKAKTPLK 747
BLAST of Moc10g12190 vs. ExPASy TrEMBL
Match:
A0A5H2XKI7 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_184S000200 PE=4 SV=1)
HSP 1 Score: 308.9 bits (790), Expect = 3.1e-80
Identity = 148/391 (37.85%), Postives = 224/391 (57.29%), Query Frame = 0
Query: 13 GFGVGKQEVEVSHLQYANDTMIFCPNEHGLLDKGWMVLDIFLNASGLSLNLSKTSIIGIH 72
G G VE+SHLQ+A+DT+ F ++ + +L++F SG+++N SK S++GI+
Sbjct: 1133 GLSPGNGMVEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTINKSKCSLVGIN 1192
Query: 73 VEEDILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSK 132
+++ ++ MA + GC V P+ YLG+PLGGN + FW+P++++V+ R++KWK LSK
Sbjct: 1193 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 1252
Query: 133 GGRLTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTG 192
GGRLT+ Q+V+ S+P+Y+ S+ + P GV IE+L R+F W G L G H V+W G
Sbjct: 1253 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEG--LDGKSNHAVSWEVVG 1312
Query: 193 LPLQCGGLGIGALQQQNNSLLLKWLWRFTQEPHALWRRVIVSIYGEDKYGWGTLPPKGSA 252
CGGLG+G+L+ ++ +L KWLWRF EPHALW +VI SIYG D GW P +
Sbjct: 1313 KAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGS 1372
Query: 253 RGRPWHEIAKNSTFFFKFLSFKVQNETRIKFWLDTWVEERPLKDRFPDLFNTSTKKEAMV 312
PW +I+ F + F V + R++FW D W LK+ FP LFN S K+ +
Sbjct: 1373 CRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNI 1432
Query: 313 AACWNGSG--NDWDLGFRRGLFDWEVDSWINLIQTIDVVRLGEGE-DHVVWSLGKNGLFS 372
++ + G WD GFRR L + E+ L+ ++ VRL D +W +GLF+
Sbjct: 1433 SSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFT 1492
Query: 373 TRTARIKMGECNPSLRSPLISAVWNFKAPKK 401
+ + C P + +W K P K
Sbjct: 1493 CHSFCSHIQNCGEGEIFPPYTQIWKAKTPLK 1521
BLAST of Moc10g12190 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 86.3 bits (212), Expect = 6.2e-17
Identity = 55/161 (34.16%), Postives = 79/161 (49.07%), Query Frame = 0
Query: 76 DILQNMAKSLGCKVEKLPVSYLGIPLGGNFKKKSFWEPLIDRVKKRIEKWKNLLLSKGGR 135
DIL + + G LPV YLG+PL S + PL+++++ RI KW LS GR
Sbjct: 11 DILHSFPFASGA----LPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGR 70
Query: 136 LTLAQSVITSLPLYFFSILKAPKGVVKEIERLTRNFFWNGGTLKGACTHLVNWGKTGLPL 195
L L SVI SL ++ S + P +KEI+ + +F W+G L V W P
Sbjct: 71 LQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAK-VAWSDVCTPK 130
Query: 196 QCGGLGIGALQQQN---------NSLLLKWLWRFTQEPHAL 228
GGLGI +L++ N N+ L W+W+ + AL
Sbjct: 131 DEGGLGIRSLKEANKGSFWSISGNTTLGSWMWKKILKHRAL 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158566.1 | 2.9e-85 | 44.74 | uncharacterized protein LOC111025019 [Momordica charantia] | [more] |
VVA25489.1 | 2.8e-80 | 37.85 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
BBN69746.1 | 6.3e-80 | 37.85 | VIRB2-interacting protein 2 [Prunus dulcis] | [more] |
BBN67784.1 | 6.3e-80 | 37.85 | VIRB2-interacting protein 2 [Prunus dulcis] | [more] |
BBG98819.1 | 6.3e-80 | 37.85 | VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protei... | [more] |
Match Name | E-value | Identity | Description | |
P0C2F6 | 5.5e-26 | 27.67 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
O00370 | 1.3e-11 | 25.79 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E196 | 1.4e-85 | 44.74 | uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A803P465 | 3.5e-84 | 43.18 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A5E4FED8 | 1.4e-80 | 37.85 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... | [more] |
A0A4Y1R3V4 | 3.1e-80 | 37.85 | VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1 | [more] |
A0A5H2XKI7 | 3.1e-80 | 37.85 | VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_184S000200 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT3G24255.1 | 6.2e-17 | 34.16 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |