Moc10g11580 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g11580
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DUF4219 domain-containing protein/UBN2 domain-containing protein
Location	chr10: 8834561 .. 8834878 (+)
RNA-Seq Expression	Moc10g11580
Synteny	Moc10g11580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTGAAGTCAGCAAAGGAGATCTGGGAGTTCCTCAAAAGTGAGTACGAAGGCGATGAGAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGACGGAATTCGAGAGAATGCAGATGAAGGATTCTGAGTCCATCAAAGAGTACTTAGACAAGTTGATCGGGATTGCTAACAAAGCAAGAGCATTAGGAACTGATCTATTTGACAATAGATTGGTTCAAAAGATTTTGGTTTTAGTACCTGAGAGATATGAAGCAACCATTGCTTCATTAGAGAATACTAAAGACCTCTCCAAACTCAAAGTGAGAAGTTTTTAG

mRNA sequence

ATGGCCTTGAAGTCAGCAAAGGAGATCTGGGAGTTCCTCAAAAGTGAGTACGAAGGCGATGAGAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGACGGAATTCGAGAGAATGCAGATGAAGGATTCTGAGTCCATCAAAGAGTACTTAGACAAGTTGATCGGGATTGCTAACAAAGCAAGAGCATTAGGAACTGATCTATTTGACAATAGATTGGTTCAAAAGATTTTGGTTTTAGTACCTGAGAGATATGAAGCAACCATTGCTTCATTAGAGAATACTAAAGACCTCTCCAAACTCAAAGTGAGAAGTTTTTAG

Coding sequence (CDS)

ATGGCCTTGAAGTCAGCAAAGGAGATCTGGGAGTTCCTCAAAAGTGAGTACGAAGGCGATGAGAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGACGGAATTCGAGAGAATGCAGATGAAGGATTCTGAGTCCATCAAAGAGTACTTAGACAAGTTGATCGGGATTGCTAACAAAGCAAGAGCATTAGGAACTGATCTATTTGACAATAGATTGGTTCAAAAGATTTTGGTTTTAGTACCTGAGAGATATGAAGCAACCATTGCTTCATTAGAGAATACTAAAGACCTCTCCAAACTCAAAGTGAGAAGTTTTTAG

Protein sequence

MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKARALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKVRSF

Homology

[Close]

BLAST of Moc10g11580 vs. NCBI nr
Match: XP_022151329.1 (uncharacterized protein LOC111019291 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 96/102 (94.12%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLKSEYEGDER KGM VLNLV EFERMQMKDSESIKEY DKLIGIANKA
Sbjct: 89  MALKSAKEIWEFLKSEYEGDERTKGMTVLNLVREFERMQMKDSESIKEYSDKLIGIANKA 148

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALGTDL DNRLVQKILV VPERYEATIASLENTKDLSKLKV
Sbjct: 149 RALGTDLSDNRLVQKILVSVPERYEATIASLENTKDLSKLKV 190

[Close]

BLAST of Moc10g11580 vs. NCBI nr
Match: XP_022157304.1 (uncharacterized protein LOC111024037 [Momordica charantia])

HSP 1 Score: 181.8 bits (460), Expect = 3.1e-42
Identity = 96/102 (94.12%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLKSEYEGDERIKGMKVLNLV E ERMQMKDSESIKEY DKLI IANKA
Sbjct: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVREVERMQMKDSESIKEYSDKLIEIANKA 60

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALGTDL DNRLVQKILV VPERYEATIASLENTKDLSKLKV
Sbjct: 61  RALGTDLSDNRLVQKILVSVPERYEATIASLENTKDLSKLKV 102

[Close]

BLAST of Moc10g11580 vs. NCBI nr
Match: XP_022152365.1 (uncharacterized protein LOC111020109 [Momordica charantia])

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41
Identity = 93/102 (91.18%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLKSEYEGDERIKGMKVLNLV EFERMQMKDS+SIKEY DKLIGIANKA
Sbjct: 89  MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVREFERMQMKDSDSIKEYSDKLIGIANKA 148

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALGTD+ DNRLV KILV VP+RYEATIASLENTKDLSKL V
Sbjct: 149 RALGTDVSDNRLVHKILVSVPKRYEATIASLENTKDLSKLNV 190

[Close]

BLAST of Moc10g11580 vs. NCBI nr
Match: XP_022148138.1 (uncharacterized protein LOC111016891 [Momordica charantia])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 94/102 (92.16%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLK+EYEG+ERIKGMKVLNLV EFE MQMKDSESIKEY DKLIGIANKA
Sbjct: 58  MALKSAKEIWEFLKNEYEGNERIKGMKVLNLVREFEXMQMKDSESIKEYSDKLIGIANKA 117

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALGTDL  NRLVQKILV VPERYEATIASLENTKDLSKLKV
Sbjct: 118 RALGTDLSXNRLVQKILVSVPERYEATIASLENTKDLSKLKV 159

[Close]

BLAST of Moc10g11580 vs. NCBI nr
Match: XP_022158688.1 (uncharacterized protein LOC111025149 [Momordica charantia])

HSP 1 Score: 178.3 bits (451), Expect = 3.4e-41
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLKSEYEGDERIKGMKVLNLV EFER+QMKDSESIKEY DKLIGIANKA
Sbjct: 89  MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVREFERIQMKDSESIKEYSDKLIGIANKA 148

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALG DL +NRLVQKI+V VPERYEATIASLEN+KDL+KLKV
Sbjct: 149 RALGIDLSNNRLVQKIMVSVPERYEATIASLENSKDLTKLKV 190

[Close]

BLAST of Moc10g11580 vs. ExPASy TrEMBL
Match: A0A6J1DCR7 (uncharacterized protein LOC111019291 OS=Momordica charantia OX=3673 GN=LOC111019291 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.1e-43
Identity = 96/102 (94.12%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLKSEYEGDER KGM VLNLV EFERMQMKDSESIKEY DKLIGIANKA
Sbjct: 89  MALKSAKEIWEFLKSEYEGDERTKGMTVLNLVREFERMQMKDSESIKEYSDKLIGIANKA 148

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALGTDL DNRLVQKILV VPERYEATIASLENTKDLSKLKV
Sbjct: 149 RALGTDLSDNRLVQKILVSVPERYEATIASLENTKDLSKLKV 190

[Close]

BLAST of Moc10g11580 vs. ExPASy TrEMBL
Match: A0A6J1DW41 (uncharacterized protein LOC111024037 OS=Momordica charantia OX=3673 GN=LOC111024037 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 96/102 (94.12%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLKSEYEGDERIKGMKVLNLV E ERMQMKDSESIKEY DKLI IANKA
Sbjct: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVREVERMQMKDSESIKEYSDKLIEIANKA 60

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALGTDL DNRLVQKILV VPERYEATIASLENTKDLSKLKV
Sbjct: 61  RALGTDLSDNRLVQKILVSVPERYEATIASLENTKDLSKLKV 102

[Close]

BLAST of Moc10g11580 vs. ExPASy TrEMBL
Match: A0A6J1DDR0 (uncharacterized protein LOC111020109 OS=Momordica charantia OX=3673 GN=LOC111020109 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.6e-42
Identity = 93/102 (91.18%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLKSEYEGDERIKGMKVLNLV EFERMQMKDS+SIKEY DKLIGIANKA
Sbjct: 89  MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVREFERMQMKDSDSIKEYSDKLIGIANKA 148

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALGTD+ DNRLV KILV VP+RYEATIASLENTKDLSKL V
Sbjct: 149 RALGTDVSDNRLVHKILVSVPKRYEATIASLENTKDLSKLNV 190

[Close]

BLAST of Moc10g11580 vs. ExPASy TrEMBL
Match: A0A6J1D394 (uncharacterized protein LOC111016891 OS=Momordica charantia OX=3673 GN=LOC111016891 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.4e-42
Identity = 94/102 (92.16%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLK+EYEG+ERIKGMKVLNLV EFE MQMKDSESIKEY DKLIGIANKA
Sbjct: 58  MALKSAKEIWEFLKNEYEGNERIKGMKVLNLVREFEXMQMKDSESIKEYSDKLIGIANKA 117

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALGTDL  NRLVQKILV VPERYEATIASLENTKDLSKLKV
Sbjct: 118 RALGTDLSXNRLVQKILVSVPERYEATIASLENTKDLSKLKV 159

[Close]

BLAST of Moc10g11580 vs. ExPASy TrEMBL
Match: A0A6J1DWT9 (uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025149 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVTEFERMQMKDSESIKEYLDKLIGIANKA 60
           MALKSAKEIWEFLKSEYEGDERIKGMKVLNLV EFER+QMKDSESIKEY DKLIGIANKA
Sbjct: 89  MALKSAKEIWEFLKSEYEGDERIKGMKVLNLVREFERIQMKDSESIKEYSDKLIGIANKA 148

Query: 61  RALGTDLFDNRLVQKILVLVPERYEATIASLENTKDLSKLKV 103
           RALG DL +NRLVQKI+V VPERYEATIASLEN+KDL+KLKV
Sbjct: 149 RALGIDLSNNRLVQKIMVSVPERYEATIASLENSKDLTKLKV 190

The following BLAST results are available for this feature:

BLAST of Moc10g11580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151329.1	1.1e-42	94.12	uncharacterized protein LOC111019291 [Momordica charantia]	[more]
XP_022157304.1	3.1e-42	94.12	uncharacterized protein LOC111024037 [Momordica charantia]	[more]
XP_022152365.1	1.2e-41	91.18	uncharacterized protein LOC111020109 [Momordica charantia]	[more]
XP_022148138.1	1.5e-41	92.16	uncharacterized protein LOC111016891 [Momordica charantia]	[more]
XP_022158688.1	3.4e-41	90.20	uncharacterized protein LOC111025149 [Momordica charantia]	[more]

BLAST of Moc10g11580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc10g11580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCR7	5.1e-43	94.12	uncharacterized protein LOC111019291 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DW41	1.5e-42	94.12	uncharacterized protein LOC111024037 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DDR0	5.6e-42	91.18	uncharacterized protein LOC111020109 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1D394	7.4e-42	92.16	uncharacterized protein LOC111016891 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DWT9	1.6e-41	90.20	uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc10g11580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 3..99 e-value: 5.2E-16 score: 58.7
None	No IPR available	PANTHER	PTHR35317:SF11	SUBFAMILY NOT NAMED	coord: 1..102
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g11580.1	Moc10g11580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding