Moc10g11500 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g11500
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr10: 8789867 .. 8790220 (+)
RNA-Seq ExpressionMoc10g11500
SyntenyMoc10g11500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGCATGTGCTTCCATCATCTCCAAGACGAAGGCCAACGCAAATAATCCATTTCCAGCGATTGTTTATAGCTCTGCCGCCGGTGGTTTCCCATCTCTGTTCCTGCAGCACTGTTGTAATGGCAAAGCAAGTAAAGATAAGGAGGAGGAGGAGGACGGCGGCGAAAAGGGAAGTGAGAGAGCGCCGTCGACGGCGGAGGAGTTCGAGCGGGTGGCGGATGAGAAGCTGAAGGAAACGGAGGCGGCGGCGGAGGGTGGAGGCGGGAGCGTCTCTGATGAAGAAGCCCTCGGAAAGAGCCGCCTCCCTAACGACGACTTAGACCGAGGGCCTGGTTACCGGCCCTGTAGCTGA

mRNA sequence

ATGTTCGCATGTGCTTCCATCATCTCCAAGACGAAGGCCAACGCAAATAATCCATTTCCAGCGATTGTTTATAGCTCTGCCGCCGGTGGTTTCCCATCTCTGTTCCTGCAGCACTGTTGTAATGGCAAAGCAAGTAAAGATAAGGAGGAGGAGGAGGACGGCGGCGAAAAGGGAAGTGAGAGAGCGCCGTCGACGGCGGAGGAGTTCGAGCGGGTGGCGGATGAGAAGCTGAAGGAAACGGAGGCGGCGGCGGAGGGTGGAGGCGGGAGCGTCTCTGATGAAGAAGCCCTCGGAAAGAGCCGCCTCCCTAACGACGACTTAGACCGAGGGCCTGGTTACCGGCCCTGTAGCTGA

Coding sequence (CDS)

ATGTTCGCATGTGCTTCCATCATCTCCAAGACGAAGGCCAACGCAAATAATCCATTTCCAGCGATTGTTTATAGCTCTGCCGCCGGTGGTTTCCCATCTCTGTTCCTGCAGCACTGTTGTAATGGCAAAGCAAGTAAAGATAAGGAGGAGGAGGAGGACGGCGGCGAAAAGGGAAGTGAGAGAGCGCCGTCGACGGCGGAGGAGTTCGAGCGGGTGGCGGATGAGAAGCTGAAGGAAACGGAGGCGGCGGCGGAGGGTGGAGGCGGGAGCGTCTCTGATGAAGAAGCCCTCGGAAAGAGCCGCCTCCCTAACGACGACTTAGACCGAGGGCCTGGTTACCGGCCCTGTAGCTGA

Protein sequence

MFACASIISKTKANANNPFPAIVYSSAAGGFPSLFLQHCCNGKASKDKEEEEDGGEKGSERAPSTAEEFERVADEKLKETEAAAEGGGGSVSDEEALGKSRLPNDDLDRGPGYRPCS
Homology
BLAST of Moc10g11500 vs. NCBI nr
Match: XP_016900655.1 (PREDICTED: uncharacterized protein LOC107990980 isoform X1 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-06
Identity = 44/116 (37.93%), Postives = 61/116 (52.59%), Query Frame = 0

Query: 9   SKTKANANNP-FPAIVYSSAAGGFP-----SLFLQHCCNGKASKDKEEEEDGGEKGSERA 68
           S T    +NP F  ++ S ++   P     SLF + C     SKD+ E   G    +ERA
Sbjct: 39  SNTNMAMSNPLFQVVIASYSSMSMPDYFPASLFPRRCYGKPISKDEAERSGGERSKAERA 98

Query: 69  PSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLPNDDLDRGPGYRPCS 118
           PSTAEEF R+A EK  K+ E   +       +   +GKS  PN+ +++GP YRPCS
Sbjct: 99  PSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMGKSSDPNNHINKGPNYRPCS 154

BLAST of Moc10g11500 vs. NCBI nr
Match: KAA0055854.1 (uncharacterized protein E6C27_scaffold104G00300 [Cucumis melo var. makuwa] >TYK24078.1 uncharacterized protein E5676_scaffold943G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-05
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 0

Query: 9   SKTKANANNP-FPAIVYSSAAGGFP-----SLFLQHCCNGKASKDKEEEEDGGEKG-SER 68
           S T    +NP F  ++ S ++   P     SLF +  C GK     E E  GGE+  +ER
Sbjct: 13  SNTNMAMSNPLFQVVIASYSSMSMPDYFPASLFPRRSCYGKPISKDEAERSGGERSKAER 72

Query: 69  APSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLPNDDLDRGPGYRPCS 118
           APSTAEEF R+A EK  K+ E   +       +   + KS  PN+ +++GP YRPCS
Sbjct: 73  APSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMEKSSDPNNHINKGPNYRPCS 129

BLAST of Moc10g11500 vs. NCBI nr
Match: XP_016900656.1 (PREDICTED: uncharacterized protein LOC107990980 isoform X2 [Cucumis melo])

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-05
Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 0

Query: 33  SLFLQHCCNGKASKDKEEEEDGGEKGSERAPSTAEEFERVADEK-LKETEAAAEGGGGSV 92
           SLF + C     SKD+ E   G    +ERAPSTAEEF R+A EK  K+ E   +      
Sbjct: 40  SLFPRRCYGKPISKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVT 99

Query: 93  SDEEALGKSRLPNDDLDRGPGYRPCS 118
            +   +GKS  PN+ +++GP YRPCS
Sbjct: 100 KESGEMGKSSDPNNHINKGPNYRPCS 125

BLAST of Moc10g11500 vs. NCBI nr
Match: KGN56105.1 (hypothetical protein Csa_009481 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-05
Identity = 54/127 (42.52%), Postives = 67/127 (52.76%), Query Frame = 0

Query: 3   ACASIISKTKANANNPFPAIV---YS--SAAGGF-PSLFLQHCCNGKASKDKEEEEDGGE 62
           AC S  + T     NPF  +    YS  S A  F PSLF +    GK SKD+ E   G  
Sbjct: 55  ACRS-NNNTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRR--YGKPSKDEAEHSGGER 114

Query: 63  KGSERAPSTAEEFERVADEKL----KETEAAAEGGGGSVS--DEEALGKSRLPNDDLDRG 118
             +ERAPSTAEEF R+A EK     +E E  A  G    +   E A+ KS  PN+ +++G
Sbjct: 115 SKAERAPSTAEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKG 174

BLAST of Moc10g11500 vs. ExPASy TrEMBL
Match: A0A1S4DY64 (uncharacterized protein LOC107990980 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990980 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 44/116 (37.93%), Postives = 61/116 (52.59%), Query Frame = 0

Query: 9   SKTKANANNP-FPAIVYSSAAGGFP-----SLFLQHCCNGKASKDKEEEEDGGEKGSERA 68
           S T    +NP F  ++ S ++   P     SLF + C     SKD+ E   G    +ERA
Sbjct: 39  SNTNMAMSNPLFQVVIASYSSMSMPDYFPASLFPRRCYGKPISKDEAERSGGERSKAERA 98

Query: 69  PSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLPNDDLDRGPGYRPCS 118
           PSTAEEF R+A EK  K+ E   +       +   +GKS  PN+ +++GP YRPCS
Sbjct: 99  PSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMGKSSDPNNHINKGPNYRPCS 154

BLAST of Moc10g11500 vs. ExPASy TrEMBL
Match: A0A5A7UKZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00480 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.5e-06
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 0

Query: 9   SKTKANANNP-FPAIVYSSAAGGFP-----SLFLQHCCNGKASKDKEEEEDGGEKG-SER 68
           S T    +NP F  ++ S ++   P     SLF +  C GK     E E  GGE+  +ER
Sbjct: 13  SNTNMAMSNPLFQVVIASYSSMSMPDYFPASLFPRRSCYGKPISKDEAERSGGERSKAER 72

Query: 69  APSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLPNDDLDRGPGYRPCS 118
           APSTAEEF R+A EK  K+ E   +       +   + KS  PN+ +++GP YRPCS
Sbjct: 73  APSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMEKSSDPNNHINKGPNYRPCS 129

BLAST of Moc10g11500 vs. ExPASy TrEMBL
Match: A0A1S4DXE7 (uncharacterized protein LOC107990980 isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990980 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.5e-06
Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 0

Query: 33  SLFLQHCCNGKASKDKEEEEDGGEKGSERAPSTAEEFERVADEK-LKETEAAAEGGGGSV 92
           SLF + C     SKD+ E   G    +ERAPSTAEEF R+A EK  K+ E   +      
Sbjct: 40  SLFPRRCYGKPISKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVT 99

Query: 93  SDEEALGKSRLPNDDLDRGPGYRPCS 118
            +   +GKS  PN+ +++GP YRPCS
Sbjct: 100 KESGEMGKSSDPNNHINKGPNYRPCS 125

BLAST of Moc10g11500 vs. ExPASy TrEMBL
Match: A0A0A0L2C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073950 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.8e-05
Identity = 54/127 (42.52%), Postives = 67/127 (52.76%), Query Frame = 0

Query: 3   ACASIISKTKANANNPFPAIV---YS--SAAGGF-PSLFLQHCCNGKASKDKEEEEDGGE 62
           AC S  + T     NPF  +    YS  S A  F PSLF +    GK SKD+ E   G  
Sbjct: 55  ACRS-NNNTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRR--YGKPSKDEAEHSGGER 114

Query: 63  KGSERAPSTAEEFERVADEKL----KETEAAAEGGGGSVS--DEEALGKSRLPNDDLDRG 118
             +ERAPSTAEEF R+A EK     +E E  A  G    +   E A+ KS  PN+ +++G
Sbjct: 115 SKAERAPSTAEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKG 174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016900655.13.9e-0637.93PREDICTED: uncharacterized protein LOC107990980 isoform X1 [Cucumis melo][more]
KAA0055854.11.1e-0538.46uncharacterized protein E6C27_scaffold104G00300 [Cucumis melo var. makuwa] >TYK2... [more]
XP_016900656.12.0e-0543.02PREDICTED: uncharacterized protein LOC107990980 isoform X2 [Cucumis melo][more]
KGN56105.15.7e-0542.52hypothetical protein Csa_009481 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4DY641.9e-0637.93uncharacterized protein LOC107990980 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7UKZ45.5e-0638.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4DXE79.5e-0643.02uncharacterized protein LOC107990980 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0L2C82.8e-0542.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073950 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g11500.1Moc10g11500.1mRNA