Moc10g11340 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g11340
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag-asp_proteas domain-containing protein
Locationchr10: 8665054 .. 8665883 (-)
RNA-Seq ExpressionMoc10g11340
SyntenyMoc10g11340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGAATAAATCAGCTAGTTCAGCCTAATGCGCCTATAAGACCAAATGTGAGAATAGAGGAAATAGTAGATGGGGTTCCTATCGCTGCTCACCCTGTTGTAGCAGTGCCCCCTCTCAATGTTGTACCCTTAGCAGACGACATCGACAGGGAAATCAGGGCGTATACAGCTCCGGCATTCTACAACTTCAACCCAGTTATCACGGAGCCAGAAATTGAAGCTTCTATGTTTGAGCTGAAACCAGTGATGTTTCAGATGCTCCAAACATTGAGTCAATTTCATGGACATACTACGGAGGACCCATCAGCATTTTAAATTATTTATAGGAGTTTGCAATTCATTCAAGGATGAGGGTATTCACGGGAAAAATTACCGGTTTTGTAATTAATTTGAATTATTTTTAGAATTAATTTGTGTTGTGGCTTAAGCTATTTCCGTATTCACTTAGAGATGAAGCCAGAACATGGTTGGAGTTTCTTCCTTCAGAGTCTATTACAAGTTGGGATGACTTGGCCAAGAAGTTCTTGATGAAGTACTTCCCACCCAGCAAAAATGCTAAGTATCGTAGTGAGATCAACAATTTTCAGCAATTTGCTGGGGAATCTGTCAATGAATCCTAAGAGCGTTTCAAGCGATTATTGCAGAGATGTCCTCACCATGGGATTCCAAGATGCATACAGATAGAGACATATTACAAAGGTCTGGATGATGCCACACGCCTAGTGATTGATGCGTCTGCAAATGGGGCTTTGCCACGAGCGTTTAAGACAGGCCACGTCGTTCTTAAAAAGGAGTTACAGCGCGTAGGAGCGTTCAAGCCAAACTAG

mRNA sequence

ATGGACAGAATAAATCAGCTAGTTCAGCCTAATGCGCCTATAAGACCAAATGTGAGAATAGAGGAAATAGTAGATGGGGTTCCTATCGCTGCTCACCCTGTTGTAGCAGTGCCCCCTCTCAATGTTGTACCCTTAGCAGACGACATCGACAGGGAAATCAGGGCGTATACAGCTCCGGCATTCTACAACTTCAACCCAGTTATCACGGAGCCAGAAATTGAAGCTTCTATGTTTGAGCTGAAACCAATAGAGACATATTACAAAGGTCTGGATGATGCCACACGCCTAGTGATTGATGCGTCTGCAAATGGGGCTTTGCCACGAGCGTTTAAGACAGGCCACGTCGTTCTTAAAAAGGAGTTACAGCGCGTAGGAGCGTTCAAGCCAAACTAG

Coding sequence (CDS)

ATGGACAGAATAAATCAGCTAGTTCAGCCTAATGCGCCTATAAGACCAAATGTGAGAATAGAGGAAATAGTAGATGGGGTTCCTATCGCTGCTCACCCTGTTGTAGCAGTGCCCCCTCTCAATGTTGTACCCTTAGCAGACGACATCGACAGGGAAATCAGGGCGTATACAGCTCCGGCATTCTACAACTTCAACCCAGTTATCACGGAGCCAGAAATTGAAGCTTCTATGTTTGAGCTGAAACCAATAGAGACATATTACAAAGGTCTGGATGATGCCACACGCCTAGTGATTGATGCGTCTGCAAATGGGGCTTTGCCACGAGCGTTTAAGACAGGCCACGTCGTTCTTAAAAAGGAGTTACAGCGCGTAGGAGCGTTCAAGCCAAACTAG

Protein sequence

MDRINQLVQPNAPIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVITEPEIEASMFELKPIETYYKGLDDATRLVIDASANGALPRAFKTGHVVLKKELQRVGAFKPN
Homology
BLAST of Moc10g11340 vs. NCBI nr
Match: XP_022150863.1 (uncharacterized protein LOC111018910 [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 3.8e-18
Identity = 55/76 (72.37%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 13 PIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVITEPE 72
          PI PNVRIEEIVDGVP+A +  V VP LNVV LA  IDREIRAY AP FYNFNPVITE E
Sbjct: 11 PIPPNVRIEEIVDGVPVATNHEVIVPSLNVVLLAKAIDREIRAYAAPTFYNFNPVITERE 70

Query: 73 IEASMFELKPIETYYK 89
          I A  FELK  E Y K
Sbjct: 71 ITAPKFELKSDEGYNK 86

BLAST of Moc10g11340 vs. NCBI nr
Match: XP_022158768.1 (uncharacterized protein LOC111025234 [Momordica charantia])

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-11
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 10 PNAPIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVIT 69
          PN PI+P +++E  V G     H +   PPLN + L DDI++EIRAY APAF++FNPVI 
Sbjct: 5  PNPPIQPKLKVER-VQGDVAGGHAL--TPPLNAILLGDDIEQEIRAYAAPAFFDFNPVIV 64

Query: 70 EPEIEASMFELKP 83
          +P IEA  FELKP
Sbjct: 65 DPIIEADRFELKP 74

BLAST of Moc10g11340 vs. NCBI nr
Match: XP_022153147.1 (probable serine/threonine-protein kinase PBL11 [Momordica charantia])

HSP 1 Score: 75.1 bits (183), Expect = 5.0e-10
Identity = 49/123 (39.84%), Postives = 60/123 (48.78%), Query Frame = 0

Query: 13  PIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVITEPE 72
           P  PN  +E +V           A P LN + LADD +R IRAY A   ++F+PVI  PE
Sbjct: 40  PRLPNPMVEVVVP---------AAAPTLNTILLADDGERAIRAYAALVLHSFHPVIAGPE 99

Query: 73  IEASMFELKP-----------------------------IETYYKGLDDATRLVIDASAN 107
           IEA  FELKP                             I+ +Y GL +ATRLV+DASAN
Sbjct: 100 IEAERFELKPVMFQMLQTVGKFFGNPCEDSHLHLRYFLEIKNFYNGLSEATRLVVDASAN 153

BLAST of Moc10g11340 vs. NCBI nr
Match: XP_022158490.1 (uncharacterized protein LOC111024970 [Momordica charantia])

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-06
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0

Query: 13 PIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVITEPE 72
          P  PN  +E I +G  +    + A PPLNV+ L DD +R IRAY APA + F+PVI  P 
Sbjct: 5  PRLPNPVVEGINEGEVVV---LAAAPPLNVILLVDDGERVIRAYAAPAIHGFHPVIAGPA 64

Query: 73 IEASMFELKPI 84
          IEA  FELK I
Sbjct: 65 IEAERFELKSI 72

BLAST of Moc10g11340 vs. NCBI nr
Match: XP_015389226.1 (uncharacterized protein LOC107178482 [Citrus sinensis])

HSP 1 Score: 55.8 bits (133), Expect = 3.1e-04
Identity = 35/105 (33.33%), Postives = 52/105 (49.52%), Query Frame = 0

Query: 45  LADDIDREIRAYTAPAFYNFNPVITEPEIEASMFELKP---------------------- 104
           +ADD DR IR Y        +P I  PE+EA+ FELKP                      
Sbjct: 1   MADDRDRAIRDYAVLTPQVVHPGIVRPEVEAANFELKPMMFQMLQTLGQFNGLPTEDPHL 60

Query: 105 -------IETYYKGLDDATRLVIDASANGA-LPRAFKTGHVVLKK 120
                  +ET+Y  L+ +TRL++DASANGA L +++   + +L++
Sbjct: 61  HLKLFLELETFYNELNPSTRLMVDASANGALLSKSYTEAYEILER 105

BLAST of Moc10g11340 vs. ExPASy TrEMBL
Match: A0A6J1DAK9 (uncharacterized protein LOC111018910 OS=Momordica charantia OX=3673 GN=LOC111018910 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.8e-18
Identity = 55/76 (72.37%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 13 PIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVITEPE 72
          PI PNVRIEEIVDGVP+A +  V VP LNVV LA  IDREIRAY AP FYNFNPVITE E
Sbjct: 11 PIPPNVRIEEIVDGVPVATNHEVIVPSLNVVLLAKAIDREIRAYAAPTFYNFNPVITERE 70

Query: 73 IEASMFELKPIETYYK 89
          I A  FELK  E Y K
Sbjct: 71 ITAPKFELKSDEGYNK 86

BLAST of Moc10g11340 vs. ExPASy TrEMBL
Match: A0A6J1DX14 (uncharacterized protein LOC111025234 OS=Momordica charantia OX=3673 GN=LOC111025234 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 10 PNAPIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVIT 69
          PN PI+P +++E  V G     H +   PPLN + L DDI++EIRAY APAF++FNPVI 
Sbjct: 5  PNPPIQPKLKVER-VQGDVAGGHAL--TPPLNAILLGDDIEQEIRAYAAPAFFDFNPVIV 64

Query: 70 EPEIEASMFELKP 83
          +P IEA  FELKP
Sbjct: 65 DPIIEADRFELKP 74

BLAST of Moc10g11340 vs. ExPASy TrEMBL
Match: A0A6J1DI54 (probable serine/threonine-protein kinase PBL11 OS=Momordica charantia OX=3673 GN=LOC111020716 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.4e-10
Identity = 49/123 (39.84%), Postives = 60/123 (48.78%), Query Frame = 0

Query: 13  PIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVITEPE 72
           P  PN  +E +V           A P LN + LADD +R IRAY A   ++F+PVI  PE
Sbjct: 40  PRLPNPMVEVVVP---------AAAPTLNTILLADDGERAIRAYAALVLHSFHPVIAGPE 99

Query: 73  IEASMFELKP-----------------------------IETYYKGLDDATRLVIDASAN 107
           IEA  FELKP                             I+ +Y GL +ATRLV+DASAN
Sbjct: 100 IEAERFELKPVMFQMLQTVGKFFGNPCEDSHLHLRYFLEIKNFYNGLSEATRLVVDASAN 153

BLAST of Moc10g11340 vs. ExPASy TrEMBL
Match: A0A6J1DVZ9 (uncharacterized protein LOC111024970 OS=Momordica charantia OX=3673 GN=LOC111024970 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 7.3e-07
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0

Query: 13 PIRPNVRIEEIVDGVPIAAHPVVAVPPLNVVPLADDIDREIRAYTAPAFYNFNPVITEPE 72
          P  PN  +E I +G  +    + A PPLNV+ L DD +R IRAY APA + F+PVI  P 
Sbjct: 5  PRLPNPVVEGINEGEVVV---LAAAPPLNVILLVDDGERVIRAYAAPAIHGFHPVIAGPA 64

Query: 73 IEASMFELKPI 84
          IEA  FELK I
Sbjct: 65 IEAERFELKSI 72

BLAST of Moc10g11340 vs. ExPASy TrEMBL
Match: A0A5B6WI95 (Gag-asp_proteas domain-containing protein OS=Gossypium australe OX=47621 GN=EPI10_021535 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.4e-04
Identity = 39/124 (31.45%), Postives = 47/124 (37.90%), Query Frame = 0

Query: 36  AVPPLNVVPLADDIDREIRAYTAPAFYNFNPVITEPEIEASMFELKPI------------ 95
           AV   N + +ADD DR IR Y  P     NP I  PEIEA  FELKP+            
Sbjct: 14  AVNAQNPIVIADDRDRTIRQYVVPLVNELNPRIRRPEIEALQFELKPVMFQMLQTIATTT 73

Query: 96  -----------------------------------------ETYYKGLDDATRLVIDASA 107
                                                    ET+Y GL+  TRLV+DAS 
Sbjct: 74  EATLRLKLFPYSLRDRARAWLNSLPSNSIFTWQELVESFLLETFYNGLNAHTRLVVDASV 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150863.13.8e-1872.37uncharacterized protein LOC111018910 [Momordica charantia][more]
XP_022158768.12.6e-1154.79uncharacterized protein LOC111025234 [Momordica charantia][more]
XP_022153147.15.0e-1039.84probable serine/threonine-protein kinase PBL11 [Momordica charantia][more]
XP_022158490.11.5e-0650.70uncharacterized protein LOC111024970 [Momordica charantia][more]
XP_015389226.13.1e-0433.33uncharacterized protein LOC107178482 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DAK91.8e-1872.37uncharacterized protein LOC111018910 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DX141.3e-1154.79uncharacterized protein LOC111025234 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DI542.4e-1039.84probable serine/threonine-protein kinase PBL11 OS=Momordica charantia OX=3673 GN... [more]
A0A6J1DVZ97.3e-0750.70uncharacterized protein LOC111024970 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5B6WI954.4e-0431.45Gag-asp_proteas domain-containing protein OS=Gossypium australe OX=47621 GN=EPI1... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g11340.1Moc10g11340.1mRNA