Moc10g10390 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g10390
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	50S ribosomal protein L33-like
Location	chr10: 7962427 .. 7963389 (+)
RNA-Seq Expression	Moc10g10390
Synteny	Moc10g10390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCTCCTTCTCTGCTTCCCTCTCGCTGAGCCTCGTCTCCAATCTCAAAGGTAATTCCCAACATTTCCATCCAAATTCAAATCATCCAATTGAGTATTGTGATCGGGAGTATTTGTTTGGTGGGGTTTATTTACGGTTTTTCTTACCAACCAATTATAGGACGGAGAAATTTAAGATTTGGGGGTCTGTTGAAATTTTCAGGATCGTTGTCACTAAGCGCTCGGGAGAGATCAATCCGTCGTGGTTCCGTAATTTGTATGGCCAAAAGATATGCTCCCAACACTACAAAGAGAAAGGTACGCAACTATGCATTATATCTGTTGGTGTATGTGTTATGTCGACACTTCTTATGTCAATTTGTATGATGTCCCTCACAATTGCAGCATTCTGTATGATATATGCTTGATATGATATAGATAACTTGTATTTATCTGATTTAATTTGTATCTTTGATATGAGATGACTGGCTGACAGCGAAACCTGATAAAACTTCTGTTGGGATTATTTTGCTGTGAAGTTTGGTACATTTTCTGTTCCAACTTTTTAGTTTGTACGTTATGCAAAAGTGAACCAACTAAATCACTGGGAACAGTATTTTGCAATTTGTTTGTTATGTTAAATGTTACTGTTGATTCATGATTTTCAATCAGGTGTCAACCGTAAGGTATAGATTTCTGTGGAGTTTTGTATGTAGGGGAAGGAATGATCATGTGGCTAACTTATCAATTGCATTCAAATGCAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGGCAAGAAAAAGAAGACGAGGAGAAAAGGGAGAAAGAGAGATTTCAAAATAGTCCGACTCTCCTCGGCTGCGGGGACTGGCTTTTTCTATGTGAAGCAGAAGAGCAAGAACATGGCTGACAAGATTCAGCTCCAGAAATATGACCCTCTTGAAAAACGTCATGTTCTGTTCACTGAAGTCAAGTGA

mRNA sequence

ATGTCTCTCTCCTTCTCTGCTTCCCTCTCGCTGAGCCTCGTCTCCAATCTCAAAGGTAATTCCCAACATTTCCATCCAAATTCAAATCATCCAATTGAGTATTGTGATCGGGAGTATTTGTTTGGTGGGGTTTATTTACGGTTTTTCTTACCAACCAATTATAGGACGGAGAAATTTAAGATTTGGGGGTCTGTTGAAATTTTCAGGATCGTTGTCACTAAGCGCTCGGGAGAGATCAATCCGTCGTGGTTCCGTAATTTGTATGGCCAAAAGATATGCTCCCAACACTACAAAGAGAAAGGTGTCAACCGTAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGGCAAGAAAAAGAAGACGAGGAGAAAAGGGAGAAAGAGAGATTTCAAAATAGTCCGACTCTCCTCGGCTGCGGGGACTGGCTTTTTCTATGTGAAGCAGAAGAGCAAGAACATGGCTGACAAGATTCAGCTCCAGAAATATGACCCTCTTGAAAAACGTCATGTTCTGTTCACTGAAGTCAAGTGA

Coding sequence (CDS)

ATGTCTCTCTCCTTCTCTGCTTCCCTCTCGCTGAGCCTCGTCTCCAATCTCAAAGGTAATTCCCAACATTTCCATCCAAATTCAAATCATCCAATTGAGTATTGTGATCGGGAGTATTTGTTTGGTGGGGTTTATTTACGGTTTTTCTTACCAACCAATTATAGGACGGAGAAATTTAAGATTTGGGGGTCTGTTGAAATTTTCAGGATCGTTGTCACTAAGCGCTCGGGAGAGATCAATCCGTCGTGGTTCCGTAATTTGTATGGCCAAAAGATATGCTCCCAACACTACAAAGAGAAAGGTGTCAACCGTAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGGCAAGAAAAAGAAGACGAGGAGAAAAGGGAGAAAGAGAGATTTCAAAATAGTCCGACTCTCCTCGGCTGCGGGGACTGGCTTTTTCTATGTGAAGCAGAAGAGCAAGAACATGGCTGACAAGATTCAGCTCCAGAAATATGACCCTCTTGAAAAACGTCATGTTCTGTTCACTGAAGTCAAGTGA

Protein sequence

MSLSFSASLSLSLVSNLKGNSQHFHPNSNHPIEYCDREYLFGGVYLRFFLPTNYRTEKFKIWGSVEIFRIVVTKRSGEINPSWFRNLYGQKICSQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYVKQKSKNMADKIQLQKYDPLEKRHVLFTEVK

Homology

[Close]

BLAST of Moc10g10390 vs. NCBI nr
Match: XP_022142796.1 (uncharacterized protein LOC111012832 [Momordica charantia])

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-34
Identity = 104/177 (58.76%), Postives = 111/177 (62.71%), Query Frame = 0


Query: 1   MSLSFSASLSLSLVSNLKGNSQHFHPNSNHPIEYCDREYLFGGVYLRFFLPTNYRTEKFK 60
           MSLSFSASLSLSLVSNLKG                 R   FGG+               K
Sbjct: 38  MSLSFSASLSLSLVSNLKGR----------------RNLRFGGL--------------LK 97

Query: 61  IWGSVEIFRIVVTKRSGEINPSWFRNLYGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKK 120
             GS+ +     + R G +            IC ++ Y      RKRLSRKRGGDPGKKK
Sbjct: 98  FSGSLSLSARERSIRRGSV------------ICMAKRYAPNTTKRKRLSRKRGGDPGKKK 157

Query: 121 KTRRKGRKRDFKIVRLSSAAGTGFFYVKQKSKNMADKIQLQKYDPLEKRHVLFTEVK 177
           KTRRKGRKRDFKIVRLSSAAGTGFFYVKQKSKNMADKIQLQKYDPLEKRHVLFTEVK
Sbjct: 158 KTRRKGRKRDFKIVRLSSAAGTGFFYVKQKSKNMADKIQLQKYDPLEKRHVLFTEVK 172

[Close]

BLAST of Moc10g10390 vs. NCBI nr
Match: KAG6577004.1 (hypothetical protein SDJN03_24578, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-24
Identity = 65/90 (72.22%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 88  YGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYV 147
           YG  IC ++ Y      RKRLSRKRGGDP KKKKTRRKG ++DFKI+RLSS AGTGFFY 
Sbjct: 69  YGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSSTAGTGFFYA 128

Query: 148 KQKSKNMADKIQLQKYDPLEKRHVLFTEVK 177
           K+KS+ MADKI+LQK+DPL KRHVLFTEVK
Sbjct: 129 KKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Moc10g10390 vs. NCBI nr
Match: KAG7015026.1 (rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-24
Identity = 65/90 (72.22%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 88  YGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYV 147
           YG  IC ++ Y      RKRLSRKRGGDP KKKKTRRKG ++DFKI+RLSS AGTGFFY 
Sbjct: 69  YGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSSTAGTGFFYA 128

Query: 148 KQKSKNMADKIQLQKYDPLEKRHVLFTEVK 177
           K+KS+ MADKI+LQK+DPL KRHVLFTEVK
Sbjct: 129 KKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Moc10g10390 vs. NCBI nr
Match: XP_022922690.1 (uncharacterized protein LOC111430611 isoform X2 [Cucurbita moschata] >XP_022922691.1 uncharacterized protein LOC111430611 isoform X2 [Cucurbita moschata])

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-24
Identity = 64/90 (71.11%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 88  YGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYV 147
           +G  IC ++ Y      RKRLSRKRGGDP KKKKTRRKG ++DFKI+RLSS AGTGFFY 
Sbjct: 69  HGSVICMARRYAPNNTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSSTAGTGFFYA 128

Query: 148 KQKSKNMADKIQLQKYDPLEKRHVLFTEVK 177
           K+KS+ MADKI+LQK+DPL KRHVLFTEVK
Sbjct: 129 KKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Moc10g10390 vs. NCBI nr
Match: XP_022922689.1 (uncharacterized protein LOC111430611 isoform X1 [Cucurbita moschata])

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-23
Identity = 63/89 (70.79%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 88  YGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYV 147
           +G  IC ++ Y      RKRLSRKRGGDP KKKKTRRKG ++DFKI+RLSS AGTGFFY 
Sbjct: 69  HGSVICMARRYAPNNTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSSTAGTGFFYA 128

Query: 148 KQKSKNMADKIQLQKYDPLEKRHVLFTEV 176
           K+KS+ MADKI+LQK+DPL KRHVLFTEV
Sbjct: 129 KKKSRKMADKIELQKFDPLAKRHVLFTEV 157

[Close]

BLAST of Moc10g10390 vs. ExPASy Swiss-Prot
Match: Q5FFJ4 (50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Gardel) OX=302409 GN=rpmG PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 4.3e-07
Identity = 24/46 (52.17%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 132 IVRLSSAAGTGFFYVKQKS-KNMADKIQLQKYDPLEKRHVLFTEVK 177
           +V+L+S+AGTG+FYVK+++ K + +K+  +KYDP+ ++HVLFTE K
Sbjct: 9   LVKLASSAGTGYFYVKKRNPKKLINKLSFRKYDPVARKHVLFTEEK 54

[Close]

BLAST of Moc10g10390 vs. ExPASy Swiss-Prot
Match: Q5HBV6 (50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Welgevonden) OX=254945 GN=rpmG PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.3e-07
Identity = 24/46 (52.17%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 132 IVRLSSAAGTGFFYVKQKS-KNMADKIQLQKYDPLEKRHVLFTEVK 177
           +V+L+S+AGTG+FYVK+++ K + +K+  +KYDP+ ++HVLFTE K
Sbjct: 9   LVKLASSAGTGYFYVKKRNPKKLINKLSFRKYDPVARKHVLFTEEK 54

[Close]

BLAST of Moc10g10390 vs. ExPASy Swiss-Prot
Match: B4S2C4 (50S ribosomal protein L33 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rpmG PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.7e-06
Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 133 VRLSSAAGTGFFYVKQKSK-NMADKIQLQKYDPLEKRHVLFTEVK 177
           ++L S+AGTGFFY   K+K NM  K++++KYDP+ ++HV+F E K
Sbjct: 5   IKLVSSAGTGFFYTTDKNKRNMPGKMEIKKYDPVVRKHVMFKEAK 49

[Close]

BLAST of Moc10g10390 vs. ExPASy Swiss-Prot
Match: Q3IFE7 (50S ribosomal protein L33 OS=Pseudoalteromonas translucida (strain TAC 125) OX=326442 GN=rpmG PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.2e-06
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 133 VRLSSAAGTGFFYVKQKSK-NMADKIQLQKYDPLEKRHVLFTEVK 177
           +RL S AGTGFFY   K+K NM +K++++K+DP  ++HVLF E K
Sbjct: 5   IRLVSTAGTGFFYTTDKNKRNMPEKMEIKKFDPKIRKHVLFKEAK 49

[Close]

BLAST of Moc10g10390 vs. ExPASy Swiss-Prot
Match: Q3YSN4 (50S ribosomal protein L33 OS=Ehrlichia canis (strain Jake) OX=269484 GN=rpmG PE=3 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 24/52 (46.15%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 126 RKRDFKIVRLSSAAGTGFFYVKQKS-KNMADKIQLQKYDPLEKRHVLFTEVK 177
           +K    +V+L+S+A TGFFYVK+++ K + +K+  +KYDP+ ++HVLF+E K
Sbjct: 3   KKGSTLLVKLASSAKTGFFYVKKRNPKKLINKLSFRKYDPVVRKHVLFSEEK 54

[Close]

BLAST of Moc10g10390 vs. ExPASy TrEMBL
Match: A0A6J1CN96 (uncharacterized protein LOC111012832 OS=Momordica charantia OX=3673 GN=LOC111012832 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 5.0e-35
Identity = 104/177 (58.76%), Postives = 111/177 (62.71%), Query Frame = 0


Query: 1   MSLSFSASLSLSLVSNLKGNSQHFHPNSNHPIEYCDREYLFGGVYLRFFLPTNYRTEKFK 60
           MSLSFSASLSLSLVSNLKG                 R   FGG+               K
Sbjct: 38  MSLSFSASLSLSLVSNLKGR----------------RNLRFGGL--------------LK 97

Query: 61  IWGSVEIFRIVVTKRSGEINPSWFRNLYGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKK 120
             GS+ +     + R G +            IC ++ Y      RKRLSRKRGGDPGKKK
Sbjct: 98  FSGSLSLSARERSIRRGSV------------ICMAKRYAPNTTKRKRLSRKRGGDPGKKK 157

Query: 121 KTRRKGRKRDFKIVRLSSAAGTGFFYVKQKSKNMADKIQLQKYDPLEKRHVLFTEVK 177
           KTRRKGRKRDFKIVRLSSAAGTGFFYVKQKSKNMADKIQLQKYDPLEKRHVLFTEVK
Sbjct: 158 KTRRKGRKRDFKIVRLSSAAGTGFFYVKQKSKNMADKIQLQKYDPLEKRHVLFTEVK 172

[Close]

BLAST of Moc10g10390 vs. ExPASy TrEMBL
Match: A0A6J1E4T6 (uncharacterized protein LOC111430611 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430611 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.4e-24
Identity = 64/90 (71.11%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 88  YGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYV 147
           +G  IC ++ Y      RKRLSRKRGGDP KKKKTRRKG ++DFKI+RLSS AGTGFFY 
Sbjct: 69  HGSVICMARRYAPNNTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSSTAGTGFFYA 128

Query: 148 KQKSKNMADKIQLQKYDPLEKRHVLFTEVK 177
           K+KS+ MADKI+LQK+DPL KRHVLFTEVK
Sbjct: 129 KKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Moc10g10390 vs. ExPASy TrEMBL
Match: A0A6J1E445 (uncharacterized protein LOC111430611 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430611 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.2e-24
Identity = 63/89 (70.79%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 88  YGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYV 147
           +G  IC ++ Y      RKRLSRKRGGDP KKKKTRRKG ++DFKI+RLSS AGTGFFY 
Sbjct: 69  HGSVICMARRYAPNNTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSSTAGTGFFYA 128

Query: 148 KQKSKNMADKIQLQKYDPLEKRHVLFTEV 176
           K+KS+ MADKI+LQK+DPL KRHVLFTEV
Sbjct: 129 KKKSRKMADKIELQKFDPLAKRHVLFTEV 157

[Close]

BLAST of Moc10g10390 vs. ExPASy TrEMBL
Match: A0A5A7UZ21 (50S ribosomal protein L33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001000 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 88  YGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYV 147
           YG  IC ++ Y      RKRLSRKRGGDP KKKKTRRKG ++DFKIVRLSS A TGFFY 
Sbjct: 71  YGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLSSTARTGFFYA 130

Query: 148 KQKSKNMADKIQLQKYDPLEKRHVLFTEVK 177
           K+KS+ MADKI++QKYDP+  RHVLFTEVK
Sbjct: 131 KKKSRKMADKIEVQKYDPIANRHVLFTEVK 160

[Close]

BLAST of Moc10g10390 vs. ExPASy TrEMBL
Match: A0A6J1J566 (uncharacterized protein LOC111482725 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482725 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 88  YGQKIC-SQHYKEKGVNRKRLSRKRGGDPGKKKKTRRKGRKRDFKIVRLSSAAGTGFFYV 147
           +G  IC ++ Y      RKRLSRKRGGDP KK+KTRRKG ++DFKI+RLSS AGTGFFY 
Sbjct: 69  HGSVICMARRYAPNTTKRKRLSRKRGGDPEKKRKTRRKGGRKDFKIIRLSSTAGTGFFYA 128

Query: 148 KQKSKNMADKIQLQKYDPLEKRHVLFTEVK 177
           K+KS+ MADKI+LQK+DPL KRHVLFTE K
Sbjct: 129 KKKSRKMADKIELQKFDPLAKRHVLFTEAK 158

[Close]

BLAST of Moc10g10390 vs. TAIR 10
Match: AT3G06320.1 (Ribosomal protein L33 family protein )

HSP 1 Score: 64.7 bits (156), Expect = 8.5e-11
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 126 RKRDFKIVRLSSAAGTGFFYVKQKS-KNMADKIQLQKYDPLEKRHVLFTEVK 177
           RK+ F  +RL SAAGTGFFYVK+KS K + +K++ +KYDP   RHVLFTE K
Sbjct: 5   RKKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQK 56

[Close]

BLAST of Moc10g10390 vs. TAIR 10
Match: AT5G18790.1 (Ribosomal protein L33 family protein )

HSP 1 Score: 64.7 bits (156), Expect = 8.5e-11
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 126 RKRDFKIVRLSSAAGTGFFYVKQKS-KNMADKIQLQKYDPLEKRHVLFTEVK 177
           RK+ F  +RL SAAGTGFFYVK+KS K + +K++ +KYDP   RHVLFTE K
Sbjct: 5   RKKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQK 56

The following BLAST results are available for this feature:

BLAST of Moc10g10390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142796.1	1.0e-34	58.76	uncharacterized protein LOC111012832 [Momordica charantia]	[more]
KAG6577004.1	1.3e-24	72.22	hypothetical protein SDJN03_24578, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7015026.1	1.3e-24	72.22	rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022922690.1	2.8e-24	71.11	uncharacterized protein LOC111430611 isoform X2 [Cucurbita moschata] >XP_0229226...	[more]
XP_022922689.1	1.1e-23	70.79	uncharacterized protein LOC111430611 isoform X1 [Cucurbita moschata]	[more]

BLAST of Moc10g10390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5FFJ4	4.3e-07	52.17	50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Gardel) OX=302409 GN=...	[more]
Q5HBV6	4.3e-07	52.17	50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Welgevonden) OX=25494...	[more]
B4S2C4	4.7e-06	51.11	50S ribosomal protein L33 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 11...	[more]
Q3IFE7	6.2e-06	53.33	50S ribosomal protein L33 OS=Pseudoalteromonas translucida (strain TAC 125) OX=3...	[more]
Q3YSN4	1.0e-05	46.15	50S ribosomal protein L33 OS=Ehrlichia canis (strain Jake) OX=269484 GN=rpmG PE=...	[more]

BLAST of Moc10g10390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN96	5.0e-35	58.76	uncharacterized protein LOC111012832 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1E4T6	1.4e-24	71.11	uncharacterized protein LOC111430611 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E445	5.2e-24	70.79	uncharacterized protein LOC111430611 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7UZ21	1.5e-23	70.00	50S ribosomal protein L33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1J566	1.5e-23	68.89	uncharacterized protein LOC111482725 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Moc10g10390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06320.1	8.5e-11	61.54	Ribosomal protein L33 family protein	[more]
AT5G18790.1	8.5e-11	61.54	Ribosomal protein L33 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038584	Ribosomal protein L33 superfamily	GENE3D	2.20.28.120	Ribosomal protein L33	coord: 123..175 e-value: 2.0E-16 score: 61.8
IPR001705	Ribosomal protein L33	PFAM	PF00471	Ribosomal_L33	coord: 132..176 e-value: 9.3E-8 score: 32.4
IPR001705	Ribosomal protein L33	TIGRFAM	TIGR01023	TIGR01023	coord: 127..176 e-value: 8.8E-13 score: 46.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..126
None	No IPR available	PANTHER	PTHR15238:SF1	54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL	coord: 126..176
None	No IPR available	PANTHER	PTHR15238	54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL	coord: 126..176
IPR018264	Ribosomal protein L33, conserved site	PROSITE	PS00582	RIBOSOMAL_L33	coord: 145..163
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 130..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g10390.1	Moc10g10390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009536	plastid
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome