Moc10g09500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g09500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Photosystem II 10 kDa polypeptide, chloroplastic
Location	chr10: 7067392 .. 7073171 (-)
RNA-Seq Expression	Moc10g09500
Synteny	Moc10g09500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGTCGGTGATGACCTCCGTGAGTCTCAAACCAGCTCCCTTCACCGTCGAGAAATCGGCAAAAGGTCTTCCGTCTCTCGCCAGGACTTCCGCCTCCTTCAAAGTCGAGGCCAGCGGCGGGAAGAAGATCAAGACCGACAAACCCTACGGTAGAATTAACCACCGATTATATCATGTGATTCTTGGCTTATTTAATTAGATTCTAACTCGTTCTTCGATGGAATGCGAGCAGGAATCAATGGTTCGATGAATTTGAGGGACGGACTTGATGCATCGGGAAGGAAGGGCAAGGTTGTTATCTCTGAATCTCTCTGAAATCTGTATCTTATTTGAATTTGCTATTTGATACTCTGCAACTGAGATTTGGTTCTGCTTTTGAATCTGATCGATTTAGGGCAAGGGAGTCTACCAGTTTGTCGACAAGTATGGGGCCAATGTCGATGGCTACAGGTAAACAAGGTTTTTGGCTATGATTTTGTTCATAGTTCTCTGGTTTGGAAATGAAAACCTGAATTTACTATCATGTCAATGAACTCATGTATGTGTTCTATTCACCTACTCTAATTTGCAGTCCCATCTACGATACCAAGGACTGGTCTCCGAGTGGTGATGTCTATGTTGGTGGTAAGTTGTTCTTCCTTCACTTTTGAATCTTCAATCCTATTTCTTTAGACTCATACCATAAATATATAAACTAGATTATACAATAAAGTTTCACGTTAGTAATTTGAATGCGCCTGCTGAGTAAATTCACGATTGATTGATCATTCATTTTTTGGACTTGTTCATAACATATACATCTAATCATTTTTCAGTTGGTATACATGAATTGAAAAACACAGAAATTTATTAGTTATTGTGTTGAAGTGTGGGTTTTCCTTTGGTTTTGTTCATTGGACAGAAATGACTGGTTTTTCCCTTTTTTTTTTTCTCATTAATTTCTGTTATTGATGTAGTTCATCTTATTAATTACAATTGTTTATCTCCATCCATACCTTATGAATTAAGACCCTTTTTTTTTCCCAATTACAACGCTTATTTTCCTTCAATTTTGTTTATTTTAAGTATGTTTTCACCCAAGACTTAACAACCAATATATTATGAACACTTTCTAAGTTCAAATATTAGCTCAAAGCTCAAGAAATAAACTATTAATATGAAATGGAAGAGAAACAACATTGTATCACGTATGATTACAATTCAAAAGTTCATACCTTTATTTTGGAGTTGTTTTCTCACCTATATATCAAAATTACCCTAACAAAGAAAAGTTTCACTAAATATCAACAATGGCTTGTAAAACAGTAACACCAAGCATTAAGAGATAGGATTGAAATATGGTCTTGGGACTAAAAATGAACGCAATAGTTCTTGATATTGTGGACAACATTGAATTGTAGGTACCACTGGATTAGCCATTTGGGCAGTGACCTTGGCTGGGCTCCTTGCTGGAGGTGCTCTTCTTGTGTACAACACCAGTGCTTTGGTCCAGTAAGATTTGTTGGAATTTGGAAGTCTGTTTTTTTTTTTTTCAGAGTATAGCTTGTAGCATGTTATCATGAACCAACAATATTAAGAAATTTGTGTAATTATCTGGACTATTTTGTCATAAGTGCTTTCTCTTCTTCTTGTTCTTTTCATTTATGCTTTTCCTGCATTACAGGTGATTGATCTACCTTGAAACCCATTTAATTTTATGTCACATTTTTCTTTTTTTGTGTGCAATGAAGGAAGATTTGAGGCTACACTCTAAATTTTTTTTTTTTTTAATGTGTCAGTCGAGTTATGTTACTATTGGTGATTTTATGTCATATTGAATGAATCATGGAAGTAAAGAATTATTATTATTATTAATTTTTTTAAAGAGTATTTTTAGAAGACATCTAAAATACTAGTAGACTATATTTTAGACTATTTTAAATAGTTTTTTAAATTTTTTTAGGAACATAATGTGAAGTGATTTTTTTTTTTGGTAGGTAATTTATTTATTTTTATTATTCCAACAACTTATTCTAAAAGGTTAAGGTACCAGTAAAGAATTATGTTGCATATCTCAATAATTTTTTGGTTTGCCCATTTAGGTAGAAGTATTTTATGAACCTTTATCAAGTATTAGAAAATAGTTAAACAAGTTAATTTTATGTTGAGCTATTTGAGAAATGTAAAAAGATAAATGGAATGATTCCTAAAGCTTTATACTTTGGCCTTATAAGACAACTATTGGAAAGATAAAATTGAGTGTTGGAATAAAATTAACCAAAACAATATGTGTTTGATCAATTAACATGATTGGTAGGGTGTGTTGTCCACTTCATTGGTAAGTTAATATACATTTATAAAAAGTAACTTGAATCTACGTAGAAATTTCTTAATATTTTCTTTAGTACAACAAATTCGGGGTGACGAGGGTTTGAATATTCGACCTCAATAGAAGGACTAAATATTAATTACTGCTGAACTGTATCATGTTGGCTTAATCATTAAACTACATTAGATTTATAGAGATTTAATACAAATTTAGTGATAAAATAATATGTAGTCCAAGAAAAAATGAGATAAAATATTAAATTAGTTTATTTATTTATTACTTTTAATGTAGAGTTAAAAGACTAAAATAAAAAATTTGAAAATTTGGACTGTCACAACAAAGTAGGTGTTAATACATTCTTTAATGCTAACCTAATCTGAACATATTTCAAAGGGTTATACCATAGATTTTTTTAGTTCCTTTTTTTTTTCATAAGCATTGCATGGCTCCAGCAATTTGATATCTATACCTTCTGAATAATATTGTAGGTTTAAATTATTTTGCATCCTTTAATTTGCAGTGGTAATATTAATTAAAAATAAAAATCCATAACAAGTATACTTAAAACTGTTTGACTGAAATAAATTAGAGAAAAAGTTAAAATATTTCCTTGAACATGGCAAGTTATTTTTGACAAGTCAATTTTTACCATTAATTTTTAATTTCAATTGGGCAAGTGTTGCAAATGGATGGAATTTAAATTTTAAGGTAAAAATATTGGTAGTTAACCCGACACTACTAGTCTTAAGATTCGAATCTCCCTTTAAATAGAAAAAGAAATAATTTATGGTAAAAATGAAGAGTAAAGTTTGATTTTTTTTTCTTTTTTTAACCAAAAATTGCTCCTTAAATTGTATTCATCTCCTTTAAAAAGTAGGTGGTTTCGATCGAAAAAAGAGAGTAAGTGTTTTGTTTTATTGACAGAAAAAAGTAACTCGGGACTGGATTCCAAATCTCACCCTTAATAAAAAGATATTGAAGCTGCATCATTTCTTTCTATTACGTGACAACATTATGGTTCTTACAGTCGGTGCTTTGCGTTCATGATACTGGGGTGAGCTTCCTTAATATTAAGGTGGCAAAGTATTCGAGAATTGGTTGAGGAAGAGGAAAAACTTGAACTTTTATTAACTCTAGCTGTTGGAACAAGGGTGGTTGAAGAAAGTCGTCTGGAGATTCAAACGCCCGTCCTGATCAATACAAAATTGATCGATTGGATCATGATTTTCTTGGAAATGCGTAAGTAAGAAGAGATGGGAGTAAGCGCGTCTTATGTACTATGAAAAACCTTTTGCATTTCTTTCATTTAATAGAAACTAATTATATACTAAAATCAATTGTTTTATTTTTCTAATAAATATTTTTTTACAAGATTAGGAAATGAAACATGAGTAGCCAACTCGAGCATGGTTCAAGATATCTATCTCTTATAAAAAGTCACAAGTTAGAATTTCCGCTCTAAGATAAAATTAACGTCTCTATATTTGCAAAAAGAAAGAAAGAAAAAAAAAGATTGACATCTCTAAAGGTTAAAATTTAAAATATGTGTAATGTTTTTCATAAAAAATAAGGTTATTGCATTGGGTGGCAAATAAGTTTTAGGTATTTAACAATATAGCACCCACTTATCAAAATTTCAAATATAGCAATTTTTATAGGATTCTGATTTTGAATTTTTTAGTATTCCCAAATTGCCCTCATCATATTTATCACGAGTTTTCGTTCTCTCTCGGATCATCGTCTTCTTCGCGCATCTTCGTTCTCTCTCGGATCATCGTCTTCTTCTTTCATCTCTTCTTCACGTGTCTTCATTTGTTCATCAGGTATCAATTTTAGCTTCTTCATTCGTATTCATTCGTTCATCAGGTATCGATTTTAGCTTCTTACTTTGTCTTCGTTCGTTCAACAGGTTTCCATTTTAGCTCTTTCGATTTTATTTCTTCTTTTTCTTCGATTTTGTTCGTGAAGAACTTTCGGCCTTTGAGGAACTTCTGTCCGTTTTAATAAGGCAGATTTCGAAAAGAAGAATTTGGACTTCTTGATGGACTATTATAATTATATTTAGTTTTTGTTCTTCTTCTTCTTCGATTTTGTTCGTTTCTGAGGTCTTGATTTTAGTTTTTCTTCTTCTTCTTTCGAATTTAAGCTTGATTTTAGTTATTGGTGTCTGATTTTGGGCGAAGGATCACCATTAAGATTGTGGAGAACCTGCCTGAATTTTAGGTGAGGTATATCATACTGATATACTCCCATTGAATATGAAGTATATTAGTGAGGTATATCATAGATATTTTACGTATATCTATAACTGATATACTCAATATAGATATTAAATATAGCATATGTCTGCGGCTTATGTTATGTTATTTGTTGATTGATATACTAATATCATCAATATTTTATATTTTTGCAGTGTTTGTAGTTATGGGCAAGCTTGCAATAATTGTTTTTCAGGTGAATGAGATGATAGTCATTGCTATATGAATTACAAAACTATTAGGATTTTGGTTGACGAAGATATGAATTTTCAAAATTTTAGGAATTTATTGAATGAAGTGAAGTTAGATCCATCAATTTGTTTTGTCCAATTTTCAGTTTTATTAAAGTTTGGTAGTAATGGAGTTCAAACTGTTGTTGAGATTAATGAAGATAAAGATGTTGCTTGGTTTTTTACTTTGGTTAAGGATGACAGTACAAGATATCCTTTAGTTGCTCATGTAAATGCTATGCCTTTGGAGGATTCTAGTGTTATTAATTCTGGAAGTGAGAATTTAGGTCTGGTTGTTGCTTCTTCTGCTATAATTGAAAGAGATTTTCAAGTTTATAACGATGTTGATATTACTAGTATGTCTTCTGCATTTTATCTGAAGGAGAAGGATCTATTTGCAAATAAGGAAGTTTTGTCAAAAGCTTTTCACTTTATGGCTATAAAGAATAACTTTCAGTTCAAGACTTTGAGATCAAATTTCAAATCAGTTGAGTTTGAATGTGTTCAGAATGGCTGCCTATGGTATGTTAGAACATCTCGTTATAGAGGTAGTGAACTATGGATGATTAGAAAGTATGTTAGTGATCATAATTGTCGTATGACGATAGTTCAATCTTCTCATAGACAAGCTTCATCATCTTTTATTGGTGAATGTATAGTTGAGAAATTTATATTTAGTTCTTCTGATCGTTCGACTCTGAAAGATATCATTCATCATATGCGCACAAACTATGGAGTTGGTGTTAGTTATTATAAAGCTTGGAGGGCAAAAACAGCTGTTAATAAATTGTTGACAGGAGATGTTGATGATTCTTATGCATTGATTCCGAAGTTTTTTGTGAAGTTGAAAGAAATGAATCCAGGTTTGTTTTCTTTAATGATATACCAGTAATATATGCTTCTGATATATGTATAATATGTATGAGATGATATATCTTCTTGATTTTATTATGATGTAGGTGTTCTGATATACTGTTAA

mRNA sequence

ATGGCGGCGTCGGTGATGACCTCCGTGAGTCTCAAACCAGCTCCCTTCACCGTCGAGAAATCGGCAAAAGGTCTTCCGTCTCTCGCCAGGACTTCCGCCTCCTTCAAAGTCGAGGCCAGCGGCGGGAAGAAGATCAAGACCGACAAACCCTACGGAATCAATGGTTCGATGAATTTGAGGGACGGACTTGATGCATCGGGAAGGAAGGGCAAGGGCAAGGGAGTCTACCAGTTTGTCGACAAGTATGGGGCCAATGTCGATGGCTACAGTCCCATCTACGATACCAAGGACTGGTCTCCGAGTGGTGATGTCTATGTTGGTGGTACCACTGGATTAGCCATTTGGGCAGTGACCTTGGCTGGGCTCCTTGCTGGAGGTGCTCTTCTTGTGTACAACACCAGTGCTTTGGTCCAGTGGCAAAGTATTCGAGAATTGGTTGAGGAAGAGGAAAAACTTGAACTTTTATTAACTCTAGCTGTTGGAACAAGGGTGGTTGAAGAAAGTCGTCTGGAGATTCAAACGCCCGTCCTGATCAATACAAAATTGATCGATTGGATCATGATTTTCTTGGAAATGCTTTTATTAAAGTTTGGTAGTAATGGAGTTCAAACTGTTGTTGAGATTAATGAAGATAAAGATGTTGCTTGGTTTTTTACTTTGGTTAAGGATGACAGTACAAGATATCCTTTAGTTGCTCATGTAAATGCTATGCCTTTGGAGGATTCTAGTGTTATTAATTCTGGAAGTGAGAATTTAGGTCTGGTTGTTGCTTCTTCTGCTATAATTGAAAGAGATTTTCAAGTTTATAACGATGTTGATATTACTAGTATGTCTTCTGCATTTTATCTGAAGGAGAAGGATCTATTTGCAAATAAGGAAGTTTTGTCAAAAGCTTTTCACTTTATGGCTATAAAGAATAACTTTCAGTTCAAGACTTTGAGATCAAATTTCAAATCAGTTGAGTTTGAATGTGTTCAGAATGGCTGCCTATGGTATGTTAGAACATCTCGTTATAGAGGTAGTGAACTATGGATGATTAGAAAGTATGTTAGTGATCATAATTGTCGTATGACGATAGTTCAATCTTCTCATAGACAAGCTTCATCATCTTTTATTGGTGAATGTATAGTTGAGAAATTTATATTTAGTTCTTCTGATCGTTCGACTCTGAAAGATATCATTCATCATATGCGCACAAACTATGGAGTTGGTGTTAGTTATTATAAAGCTTGGAGGGCAAAAACAGCTGTTAATAAATTGTTGACAGGAGATGTTGATGATTCTTATGCATTGATTCCGAAGTTTTTTGTGAAGTTGAAAGAAATGAATCCAGGTGTTCTGATATACTGTTAA

Coding sequence (CDS)

ATGGCGGCGTCGGTGATGACCTCCGTGAGTCTCAAACCAGCTCCCTTCACCGTCGAGAAATCGGCAAAAGGTCTTCCGTCTCTCGCCAGGACTTCCGCCTCCTTCAAAGTCGAGGCCAGCGGCGGGAAGAAGATCAAGACCGACAAACCCTACGGAATCAATGGTTCGATGAATTTGAGGGACGGACTTGATGCATCGGGAAGGAAGGGCAAGGGCAAGGGAGTCTACCAGTTTGTCGACAAGTATGGGGCCAATGTCGATGGCTACAGTCCCATCTACGATACCAAGGACTGGTCTCCGAGTGGTGATGTCTATGTTGGTGGTACCACTGGATTAGCCATTTGGGCAGTGACCTTGGCTGGGCTCCTTGCTGGAGGTGCTCTTCTTGTGTACAACACCAGTGCTTTGGTCCAGTGGCAAAGTATTCGAGAATTGGTTGAGGAAGAGGAAAAACTTGAACTTTTATTAACTCTAGCTGTTGGAACAAGGGTGGTTGAAGAAAGTCGTCTGGAGATTCAAACGCCCGTCCTGATCAATACAAAATTGATCGATTGGATCATGATTTTCTTGGAAATGCTTTTATTAAAGTTTGGTAGTAATGGAGTTCAAACTGTTGTTGAGATTAATGAAGATAAAGATGTTGCTTGGTTTTTTACTTTGGTTAAGGATGACAGTACAAGATATCCTTTAGTTGCTCATGTAAATGCTATGCCTTTGGAGGATTCTAGTGTTATTAATTCTGGAAGTGAGAATTTAGGTCTGGTTGTTGCTTCTTCTGCTATAATTGAAAGAGATTTTCAAGTTTATAACGATGTTGATATTACTAGTATGTCTTCTGCATTTTATCTGAAGGAGAAGGATCTATTTGCAAATAAGGAAGTTTTGTCAAAAGCTTTTCACTTTATGGCTATAAAGAATAACTTTCAGTTCAAGACTTTGAGATCAAATTTCAAATCAGTTGAGTTTGAATGTGTTCAGAATGGCTGCCTATGGTATGTTAGAACATCTCGTTATAGAGGTAGTGAACTATGGATGATTAGAAAGTATGTTAGTGATCATAATTGTCGTATGACGATAGTTCAATCTTCTCATAGACAAGCTTCATCATCTTTTATTGGTGAATGTATAGTTGAGAAATTTATATTTAGTTCTTCTGATCGTTCGACTCTGAAAGATATCATTCATCATATGCGCACAAACTATGGAGTTGGTGTTAGTTATTATAAAGCTTGGAGGGCAAAAACAGCTGTTAATAAATTGTTGACAGGAGATGTTGATGATTCTTATGCATTGATTCCGAAGTTTTTTGTGAAGTTGAAAGAAATGAATCCAGGTGTTCTGATATACTGTTAA

Protein sequence

MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQWQSIRELVEEEEKLELLLTLAVGTRVVEESRLEIQTPVLINTKLIDWIMIFLEMLLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPLVAHVNAMPLEDSSVINSGSENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNFQFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQASSSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDSYALIPKFFVKLKEMNPGVLIYC

Homology

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BLAST of Moc10g09500 vs. NCBI nr
Match: TYK28211.1 (MuDR family transposase [Cucumis melo var. makuwa])

HSP 1 Score: 307.8 bits (787), Expect = 1.6e-79
Identity = 148/257 (57.59%), Postives = 199/257 (77.43%), Query Frame = 0


Query: 193 LLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPL----VAHVNAMPLEDSSVINSG 252
           +LL +G   +QT V+I EDKDV WF +LVK   TR+PL    +AHV+ M LE SSV++SG
Sbjct: 28  ILLDYGITDIQTAVQIQEDKDVTWFLSLVKGQITRHPLAAHAIAHVSNMDLEWSSVVDSG 87

Query: 253 SENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNF 312
            +NL  +++SS+ I+ DFQ+  D+ ++S+SS F LKEKD+FA+KE+LSK+F+++AIKNNF
Sbjct: 88  MDNLCSLLSSSS-IDDDFQILTDIHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNF 147

Query: 313 QFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQAS 372
           +FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QAS
Sbjct: 148 EFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWQLRKYIANHNCSINVIQTTHKQAS 207

Query: 373 SSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDS 432
           SS I +CIV+   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +S
Sbjct: 208 SSLISDCIVKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGEAKES 267

Query: 433 YALIPKFFVKLKEMNPG 446
           YALIP FF+KLKE+NPG
Sbjct: 268 YALIPNFFMKLKEINPG 281

[Close]

BLAST of Moc10g09500 vs. NCBI nr
Match: TYK23827.1 (MuDR family transposase [Cucumis melo var. makuwa])

HSP 1 Score: 306.2 bits (783), Expect = 4.6e-79
Identity = 149/257 (57.98%), Postives = 199/257 (77.43%), Query Frame = 0


Query: 193 LLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPLVA----HVNAMPLEDSSVINSG 252
           +LL +G   +QTVV+I EDKDV WF +LVK   TR+PLVA    HV+ M LE SSV++SG
Sbjct: 60  ILLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIVHVSNMDLEWSSVVDSG 119

Query: 253 SENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNF 312
            +NL  +++SS+ I+ DFQ+  D+ ++S+SS F LKEKD+FA+KE+LSK+F+++AIKNNF
Sbjct: 120 MDNLCSLLSSSS-IDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNF 179

Query: 313 QFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQAS 372
           +FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QAS
Sbjct: 180 EFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAS 239

Query: 373 SSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDS 432
           SS I +CI +   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +S
Sbjct: 240 SSLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGEAKES 299

Query: 433 YALIPKFFVKLKEMNPG 446
           YALIP FF+KLKE+NPG
Sbjct: 300 YALIPNFFMKLKEINPG 313

[Close]

BLAST of Moc10g09500 vs. NCBI nr
Match: KAA0063840.1 (MuDR family transposase [Cucumis melo var. makuwa])

HSP 1 Score: 304.7 bits (779), Expect = 1.3e-78
Identity = 147/257 (57.20%), Postives = 198/257 (77.04%), Query Frame = 0


Query: 193 LLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPL----VAHVNAMPLEDSSVINSG 252
           +LL +G   +QT V+I EDKDV WF +LVK   TR+PL    +AHV+ M LE SSV++SG
Sbjct: 28  ILLDYGITDIQTAVQIQEDKDVTWFLSLVKGQITRHPLAAHAIAHVSNMDLEWSSVVDSG 87

Query: 253 SENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNF 312
            +NL  +++SS+ I+ DFQ+  D+ ++S+SS F LKEKD+FA+KE+LSK+F+++AIKNNF
Sbjct: 88  MDNLCSLLSSSS-IDDDFQILTDIHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNF 147

Query: 313 QFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQAS 372
           +FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QAS
Sbjct: 148 EFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAS 207

Query: 373 SSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDS 432
           SS I +CI +   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +S
Sbjct: 208 SSLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGEAKES 267

Query: 433 YALIPKFFVKLKEMNPG 446
           YALIP FF+KLKE+NPG
Sbjct: 268 YALIPNFFMKLKEINPG 281

[Close]

BLAST of Moc10g09500 vs. NCBI nr
Match: KAA0059897.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 2.3e-78
Identity = 158/318 (49.69%), Postives = 219/318 (68.87%), Query Frame = 0


Query: 132 NTSALVQWQSIRELVEEEEKLELLLTLAVGTRVVEESRLEIQTPVLINTKLIDWIMIFLE 191
           +T++ + +++   LV+E    E  ++L +   + + S   IQ  +               
Sbjct: 16  DTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI--------------- 75

Query: 192 MLLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPLVAHVNA----MPLEDSSVINS 251
             LL +G   +QTVV+I EDKDV WF +LVK   TR+PLVAH  A    M LE SSV++S
Sbjct: 76  --LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDS 135

Query: 252 GSENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNN 311
           G +NL  ++ SS+ I+ DFQ+  D+ ++S+SS F LKEKD+FANKE+LSK+F+++AIKNN
Sbjct: 136 GMDNLCSLLPSSS-IDDDFQILTDIHVSSLSSTFDLKEKDMFANKELLSKSFYYIAIKNN 195

Query: 312 FQFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQA 371
           F+FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QA
Sbjct: 196 FEFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA 255

Query: 372 SSSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDD 431
           S+S I +CI +   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +
Sbjct: 256 SASLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGEAKE 313

Query: 432 SYALIPKFFVKLKEMNPG 446
           SYALIP FF+KLKE+NPG
Sbjct: 316 SYALIPNFFMKLKEINPG 313

[Close]

BLAST of Moc10g09500 vs. NCBI nr
Match: KAA0063194.1 (uncharacterized protein E6C27_scaffold381G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 6.7e-78
Identity = 149/257 (57.98%), Postives = 197/257 (76.65%), Query Frame = 0


Query: 193 LLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPLV----AHVNAMPLEDSSVINSG 252
           +LL +G   +QTVV+I EDKDV WF +LVK   TR+PLV    AHV+ M LE  SV++SG
Sbjct: 60  ILLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWFSVVDSG 119

Query: 253 SENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNF 312
            +NL  ++ SS+ I+ DFQ+  DV ++S+SS F LKEKD+FA+KE+LSK+F+++AIKNNF
Sbjct: 120 MDNLCSLLPSSS-IDDDFQILTDVHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNF 179

Query: 313 QFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQAS 372
           +FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QAS
Sbjct: 180 EFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAS 239

Query: 373 SSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDS 432
           SS I +CIV+   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +S
Sbjct: 240 SSLISDCIVKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVLNSLNGEAKES 299

Query: 433 YALIPKFFVKLKEMNPG 446
           YALIP FF+KLKE+N G
Sbjct: 300 YALIPNFFMKLKEINLG 313

[Close]

BLAST of Moc10g09500 vs. ExPASy Swiss-Prot
Match: Q40519 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBR PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-56
Identity = 116/139 (83.45%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MAASVMTSVSLKPAPFTVEKSA-KGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNL 60
           MA++VM   SLKPAPF+VEK+A KGLPSLAR+S+SF+V+ASG KK+KTDKPYGINGSM+L
Sbjct: 1   MASTVM---SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMSL 60

Query: 61  RDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTTGLAIWAVTL 120
           RDG+DASGRK KGKGVYQFVDKYGANVDGYSPIY+T DWSPSGDVYVGGTTGLAIWAVTL
Sbjct: 61  RDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTL 120

Query: 121 AGLLAGGALLVYNTSALVQ 139
            G+LAGGALLV+NTSAL Q
Sbjct: 121 VGILAGGALLVFNTSALAQ 136

[Close]

BLAST of Moc10g09500 vs. ExPASy Swiss-Prot
Match: P06183 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum OX=4113 GN=PSBR PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.2e-55
Identity = 115/139 (82.73%), Postives = 128/139 (92.09%), Query Frame = 0


Query: 1   MAASVMTSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNL 60
           MA++VM+S+SLKP  FT+EK S KGLPSLAR+S+SFKV ASG KK+KTDKPYGINGSM L
Sbjct: 1   MASTVMSSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMAL 60

Query: 61  RDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTTGLAIWAVTL 120
           RDG+DASGRK KGKGVYQ+VDKYGANVDGYSPIY+T +WSPSGDVYVGGTTGLAIWAVTL
Sbjct: 61  RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 120

Query: 121 AGLLAGGALLVYNTSALVQ 139
            G+LAGGALLVYNTSAL Q
Sbjct: 121 VGILAGGALLVYNTSALAQ 138

[Close]

BLAST of Moc10g09500 vs. ExPASy Swiss-Prot
Match: Q40163 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBR PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.2e-55
Identity = 114/139 (82.01%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 1   MAASVMTSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNL 60
           MA++VM+S+SLKP  FT+EK S KGLPSL R+S+SFKV ASG KK+KTDKPYGINGSM L
Sbjct: 1   MASTVMSSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMAL 60

Query: 61  RDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTTGLAIWAVTL 120
           RDG+DASGRK KGKGVYQ+VDKYGANVDGYSPIY+T +WSPSGDVYVGGTTGLAIWAVTL
Sbjct: 61  RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 120

Query: 121 AGLLAGGALLVYNTSALVQ 139
            G+LAGGALLVYNTSAL Q
Sbjct: 121 LGILAGGALLVYNTSALAQ 138

[Close]

BLAST of Moc10g09500 vs. ExPASy Swiss-Prot
Match: P27202 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBR PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.2e-52
Identity = 111/140 (79.29%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMN 60
           MAASVM +SV+LKPA FTVEK +A+GLPSL R   SFK+ ASG KKIKTDKP+GINGSM+
Sbjct: 1   MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60

Query: 61  LRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTTGLAIWAVT 120
           LRDG+DASGRKGKG GVY++VDKYGANVDGYSPIY+  +WS SGDVY GG TGLAIWAVT
Sbjct: 61  LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120

Query: 121 LAGLLAGGALLVYNTSALVQ 139
           LAG+LAGGALLVYNTSAL Q
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140

[Close]

BLAST of Moc10g09500 vs. ExPASy Swiss-Prot
Match: P49108 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris OX=3711 GN=PSBR PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.5e-52
Identity = 112/141 (79.43%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTS-ASFKVEASGGKKIKTDKPYGINGSM 60
           MAASVM +SV+LKPA FTVEK SA+GLPSL R S +SF++ ASG KKIKTDKP+G+NGSM
Sbjct: 1   MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60

Query: 61  NLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTTGLAIWAV 120
           +LRDG+DASGRKGKG GVY+FVDKYGANVDGYSPIY+  +WS SGDVY GG TGLAIWAV
Sbjct: 61  DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120

Query: 121 TLAGLLAGGALLVYNTSALVQ 139
           TLAG+LAGGALLVYNTSAL Q
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141

[Close]

BLAST of Moc10g09500 vs. ExPASy TrEMBL
Match: A0A5D3DX57 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold258G00220 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.7e-80
Identity = 148/257 (57.59%), Postives = 199/257 (77.43%), Query Frame = 0


Query: 193 LLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPL----VAHVNAMPLEDSSVINSG 252
           +LL +G   +QT V+I EDKDV WF +LVK   TR+PL    +AHV+ M LE SSV++SG
Sbjct: 28  ILLDYGITDIQTAVQIQEDKDVTWFLSLVKGQITRHPLAAHAIAHVSNMDLEWSSVVDSG 87

Query: 253 SENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNF 312
            +NL  +++SS+ I+ DFQ+  D+ ++S+SS F LKEKD+FA+KE+LSK+F+++AIKNNF
Sbjct: 88  MDNLCSLLSSSS-IDDDFQILTDIHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNF 147

Query: 313 QFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQAS 372
           +FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QAS
Sbjct: 148 EFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWQLRKYIANHNCSINVIQTTHKQAS 207

Query: 373 SSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDS 432
           SS I +CIV+   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +S
Sbjct: 208 SSLISDCIVKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGEAKES 267

Query: 433 YALIPKFFVKLKEMNPG 446
           YALIP FF+KLKE+NPG
Sbjct: 268 YALIPNFFMKLKEINPG 281

[Close]

BLAST of Moc10g09500 vs. ExPASy TrEMBL
Match: A0A5D3DJR8 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold162G00300 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.2e-79
Identity = 149/257 (57.98%), Postives = 199/257 (77.43%), Query Frame = 0


Query: 193 LLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPLVA----HVNAMPLEDSSVINSG 252
           +LL +G   +QTVV+I EDKDV WF +LVK   TR+PLVA    HV+ M LE SSV++SG
Sbjct: 60  ILLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIVHVSNMDLEWSSVVDSG 119

Query: 253 SENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNF 312
            +NL  +++SS+ I+ DFQ+  D+ ++S+SS F LKEKD+FA+KE+LSK+F+++AIKNNF
Sbjct: 120 MDNLCSLLSSSS-IDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNF 179

Query: 313 QFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQAS 372
           +FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QAS
Sbjct: 180 EFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAS 239

Query: 373 SSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDS 432
           SS I +CI +   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +S
Sbjct: 240 SSLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGEAKES 299

Query: 433 YALIPKFFVKLKEMNPG 446
           YALIP FF+KLKE+NPG
Sbjct: 300 YALIPNFFMKLKEINPG 313

[Close]

BLAST of Moc10g09500 vs. ExPASy TrEMBL
Match: A0A5A7V9E1 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00670 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 6.5e-79
Identity = 147/257 (57.20%), Postives = 198/257 (77.04%), Query Frame = 0


Query: 193 LLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPL----VAHVNAMPLEDSSVINSG 252
           +LL +G   +QT V+I EDKDV WF +LVK   TR+PL    +AHV+ M LE SSV++SG
Sbjct: 28  ILLDYGITDIQTAVQIQEDKDVTWFLSLVKGQITRHPLAAHAIAHVSNMDLEWSSVVDSG 87

Query: 253 SENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNF 312
            +NL  +++SS+ I+ DFQ+  D+ ++S+SS F LKEKD+FA+KE+LSK+F+++AIKNNF
Sbjct: 88  MDNLCSLLSSSS-IDDDFQILTDIHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNF 147

Query: 313 QFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQAS 372
           +FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QAS
Sbjct: 148 EFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAS 207

Query: 373 SSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDS 432
           SS I +CI +   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +S
Sbjct: 208 SSLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGEAKES 267

Query: 433 YALIPKFFVKLKEMNPG 446
           YALIP FF+KLKE+NPG
Sbjct: 268 YALIPNFFMKLKEINPG 281

[Close]

BLAST of Moc10g09500 vs. ExPASy TrEMBL
Match: A0A5A7UZ18 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G001920 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78
Identity = 158/318 (49.69%), Postives = 219/318 (68.87%), Query Frame = 0


Query: 132 NTSALVQWQSIRELVEEEEKLELLLTLAVGTRVVEESRLEIQTPVLINTKLIDWIMIFLE 191
           +T++ + +++   LV+E    E  ++L +   + + S   IQ  +               
Sbjct: 16  DTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI--------------- 75

Query: 192 MLLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPLVAHVNA----MPLEDSSVINS 251
             LL +G   +QTVV+I EDKDV WF +LVK   TR+PLVAH  A    M LE SSV++S
Sbjct: 76  --LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDS 135

Query: 252 GSENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNN 311
           G +NL  ++ SS+ I+ DFQ+  D+ ++S+SS F LKEKD+FANKE+LSK+F+++AIKNN
Sbjct: 136 GMDNLCSLLPSSS-IDDDFQILTDIHVSSLSSTFDLKEKDMFANKELLSKSFYYIAIKNN 195

Query: 312 FQFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQA 371
           F+FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QA
Sbjct: 196 FEFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA 255

Query: 372 SSSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDD 431
           S+S I +CI +   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +
Sbjct: 256 SASLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGEAKE 313

Query: 432 SYALIPKFFVKLKEMNPG 446
           SYALIP FF+KLKE+NPG
Sbjct: 316 SYALIPNFFMKLKEINPG 313

[Close]

BLAST of Moc10g09500 vs. ExPASy TrEMBL
Match: A0A5A7V7K0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00870 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.2e-78
Identity = 149/257 (57.98%), Postives = 197/257 (76.65%), Query Frame = 0


Query: 193 LLLKFGSNGVQTVVEINEDKDVAWFFTLVKDDSTRYPLV----AHVNAMPLEDSSVINSG 252
           +LL +G   +QTVV+I EDKDV WF +LVK   TR+PLV    AHV+ M LE  SV++SG
Sbjct: 60  ILLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWFSVVDSG 119

Query: 253 SENLGLVVASSAIIERDFQVYNDVDITSMSSAFYLKEKDLFANKEVLSKAFHFMAIKNNF 312
            +NL  ++ SS+ I+ DFQ+  DV ++S+SS F LKEKD+FA+KE+LSK+F+++AIKNNF
Sbjct: 120 MDNLCSLLPSSS-IDDDFQILTDVHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNF 179

Query: 313 QFKTLRSNFKSVEFECVQNGCLWYVRTSRYRGSELWMIRKYVSDHNCRMTIVQSSHRQAS 372
           +FKT+RSN KS+EF+C Q+ C WYVR SRY+G ELW +RKY+++HNC + ++Q++H+QAS
Sbjct: 180 EFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAS 239

Query: 373 SSFIGECIVEKFIFSSSDRSTLKDIIHHMRTNYGVGVSYYKAWRAKTAVNKLLTGDVDDS 432
           SS I +CIV+   FSS DRST  DI+ HMRT  GV VSYYKAWRAK  V   L G+  +S
Sbjct: 240 SSLISDCIVKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVLNSLNGEAKES 299

Query: 433 YALIPKFFVKLKEMNPG 446
           YALIP FF+KLKE+N G
Sbjct: 300 YALIPNFFMKLKEINLG 313

[Close]

BLAST of Moc10g09500 vs. TAIR 10
Match: AT1G79040.1 (photosystem II subunit R )

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-53
Identity = 111/140 (79.29%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMN 60
           MAASVM +SV+LKPA FTVEK +A+GLPSL R   SFK+ ASG KKIKTDKP+GINGSM+
Sbjct: 1   MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60

Query: 61  LRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTTGLAIWAVT 120
           LRDG+DASGRKGKG GVY++VDKYGANVDGYSPIY+  +WS SGDVY GG TGLAIWAVT
Sbjct: 61  LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120

Query: 121 LAGLLAGGALLVYNTSALVQ 139
           LAG+LAGGALLVYNTSAL Q
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140

The following BLAST results are available for this feature:

BLAST of Moc10g09500 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28211.1	1.6e-79	57.59	MuDR family transposase [Cucumis melo var. makuwa]	[more]
TYK23827.1	4.6e-79	57.98	MuDR family transposase [Cucumis melo var. makuwa]	[more]
KAA0063840.1	1.3e-78	57.20	MuDR family transposase [Cucumis melo var. makuwa]	[more]
KAA0059897.1	2.3e-78	49.69	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]	[more]
KAA0063194.1	6.7e-78	57.98	uncharacterized protein E6C27_scaffold381G00870 [Cucumis melo var. makuwa]	[more]

BLAST of Moc10g09500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40519	1.1e-56	83.45	Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum OX=4097 GN...	[more]
P06183	2.2e-55	82.73	Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum OX=4113 GN...	[more]
Q40163	8.2e-55	82.01	Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
P27202	2.2e-52	79.29	Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P49108	6.5e-52	79.43	Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris OX=3711 ...	[more]

BLAST of Moc10g09500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DX57	7.7e-80	57.59	MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DJR8	2.2e-79	57.98	MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V9E1	6.5e-79	57.20	MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UZ18	1.1e-78	49.69	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7V7K0	3.2e-78	57.98	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Moc10g09500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79040.1	1.6e-53	79.29	photosystem II subunit R	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006814	Photosystem II PsbR	PFAM	PF04725	PsbR	coord: 40..136 e-value: 2.8E-49 score: 165.5
IPR006814	Photosystem II PsbR	PANTHER	PTHR34369	PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC	coord: 1..138
IPR004332	Transposase, MuDR, plant	PFAM	PF03108	DBD_Tnp_Mut	coord: 289..346 e-value: 2.6E-7 score: 30.5
None	No IPR available	PANTHER	PTHR34369:SF8	BNAANNG27100D PROTEIN	coord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g09500.1	Moc10g09500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0042651	thylakoid membrane