Moc10g09490 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g09490
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	cilia- and flagella-associated protein 251-like
Location	chr10: 7063333 .. 7064274 (+)
RNA-Seq Expression	Moc10g09490
Synteny	Moc10g09490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACAATTCTTCCTACAAAAGATGAATTATCTATTGATATCTTCACAAATTTGATGATGCAAGAAGACATTGTGCAAGATGATTGTTTATGCAAAGATGTGCACAACAGTGTGTTCCTGGTTGTAGCTCGAACCCGGCCTCCGGACCGACCTGAACACTTGGGCGGACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTCAGTATAGGTCGGATTCCAAGTCTAGTTCGAAGCCAGAAATCCTCGTACCTGATCGGGGAGTGAGGTCCCCTACTTATGGGTGGTGGTCCCGCTAATCTAGCGACTGTTACATTCGGTAATCTCGGGACCGTCGGTTACATCCGGTAATCTCGGGACCGACGGTTACGCCCGATAATCACGCCGCAGACAGTTGCGCATCTCGGCCCATACCGAGCTCCCCGGTGGGTCGGACCTAGGCCAGGCTCACCTCGGCCCTCACACTCGGCATTTGTCGGCGTTGGTGGCGGCCATCTCGGCCTTCCGAGCTGGGCATGATTCATGAGTCATCTTGGAGCACCAATAGGGGTCTTCCACGTGTCCAGAGTATTCCCTTCCCCAAACAATGATGATCCCAACAATATGGATGATATGGCAGAAGGAATAAATATTGAGGAGAAAGAAGGAACAGAAACACATGGTTCAAGTAAAAGCTTGACTTTGAAGGAGGAAATACAAGAAATTAGAAGTGTCCAGAAAAAAATGCTGGGGATGTTGACTTATATATTAGAAGTAATCAATGATAGATTTGCACCAAAATCAAACATTGAAAAACAATCCCAAGAATCACTTCAGAAGAACGTACCTCCATCGATAAGTCTTGAGCTTCTTGACGAAGAAGTAGATATTGATAAAATTGTGGAATATGCAATCAATCATGAGAAAGAGGATTCAGATCGGGATGGGAAAGGGAAATAA

mRNA sequence

ATGATTACAATTCTTCCTACAAAAGATGAATTATCTATTGATATCTTCACAAATTTGATGATGCAAGAAGACATTGTGCAAGATGATTGTTTATGCAAAGATGTGCACAACAGTGTGTTCCTGGTTGTAGCTCGAACCCGGCCTCCGGACCGACCTGAACACTTGGGCGGACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTCAGTATAGGTCGGATTCCAAGTCTAGTTCGAAGCCAGAAATCCTCGTACCTGATCGGGGAAGTATTCCCTTCCCCAAACAATGATGATCCCAACAATATGGATGATATGGCAGAAGGAATAAATATTGAGGAGAAAGAAGGAACAGAAACACATGGTTCAAGTAAAAGCTTGACTTTGAAGGAGGAAATACAAGAAATTAGAAGTGTCCAGAAAAAAATGCTGGGGATGTTGACTTATATATTAGAAGTAATCAATGATAGATTTGCACCAAAATCAAACATTGAAAAACAATCCCAAGAATCACTTCAGAAGAACGTACCTCCATCGATAAGTCTTGAGCTTCTTGACGAAGAAGTAGATATTGATAAAATTGTGGAATATGCAATCAATCATGAGAAAGAGGATTCAGATCGGGATGGGAAAGGGAAATAA

Coding sequence (CDS)

ATGATTACAATTCTTCCTACAAAAGATGAATTATCTATTGATATCTTCACAAATTTGATGATGCAAGAAGACATTGTGCAAGATGATTGTTTATGCAAAGATGTGCACAACAGTGTGTTCCTGGTTGTAGCTCGAACCCGGCCTCCGGACCGACCTGAACACTTGGGCGGACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTCAGTATAGGTCGGATTCCAAGTCTAGTTCGAAGCCAGAAATCCTCGTACCTGATCGGGGAAGTATTCCCTTCCCCAAACAATGATGATCCCAACAATATGGATGATATGGCAGAAGGAATAAATATTGAGGAGAAAGAAGGAACAGAAACACATGGTTCAAGTAAAAGCTTGACTTTGAAGGAGGAAATACAAGAAATTAGAAGTGTCCAGAAAAAAATGCTGGGGATGTTGACTTATATATTAGAAGTAATCAATGATAGATTTGCACCAAAATCAAACATTGAAAAACAATCCCAAGAATCACTTCAGAAGAACGTACCTCCATCGATAAGTCTTGAGCTTCTTGACGAAGAAGTAGATATTGATAAAATTGTGGAATATGCAATCAATCATGAGAAAGAGGATTCAGATCGGGATGGGAAAGGGAAATAA

Protein sequence

MITILPTKDELSIDIFTNLMMQEDIVQDDCLCKDVHNSVFLVVARTRPPDRPEHLGGPAQKGEHSDDQVSIGRIPSLVRSQKSSYLIGEVFPSPNNDDPNNMDDMAEGINIEEKEGTETHGSSKSLTLKEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKIVEYAINHEKEDSDRDGKGK

Homology

[Close]

BLAST of Moc10g09490 vs. NCBI nr
Match: XP_022156699.1 (cilia- and flagella-associated protein 251-like [Momordica charantia])

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-43
Identity = 101/117 (86.32%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 96  NDDPNNMDDMAEGINIEEKEGTETHGSSKSLTLKEEIQEIRSVQKKMLGMLTYILEVIND 155
           +DDPNNM DMAEG NIEE+E TETHGSSKSLTLKE+IQEIRSVQK+M GMLT ILEVIND
Sbjct: 8   DDDPNNMYDMAEGRNIEEEERTETHGSSKSLTLKEKIQEIRSVQKQMPGMLTSILEVIND 67

Query: 156 RFAPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKIVEYAINHEKEDSDRDGKGK 213
           RF PKSNIEKQSQESLQKNVPPS SL+LLD+EVDIDKIV+YAINHEKED+D+DGKGK
Sbjct: 68  RFPPKSNIEKQSQESLQKNVPPSRSLKLLDKEVDIDKIVKYAINHEKEDADQDGKGK 124

[Close]

BLAST of Moc10g09490 vs. NCBI nr
Match: KAA0031317.1 (uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa] >KAA0034561.1 uncharacterized protein E6C27_scaffold65G005770 [Cucumis melo var. makuwa] >KAA0035329.1 uncharacterized protein E6C27_scaffold228G001300 [Cucumis melo var. makuwa] >KAA0037560.1 uncharacterized protein E6C27_scaffold277G001820 [Cucumis melo var. makuwa] >KAA0038033.1 uncharacterized protein E6C27_scaffold36G002310 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-06
Identity = 34/84 (40.48%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 129 KEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEV 188
           KE+++ ++  Q++++ +L  + EV+N R + K   EKQSQE L+KN PP ISLE++D +V
Sbjct: 172 KEDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADV 231

Query: 189 DIDKIVEYAINHEKEDSDRDGKGK 213
           D +K +E     E++D+ R+ K K
Sbjct: 232 DKEKEIEDNEETEEDDNHRENKSK 255

[Close]

BLAST of Moc10g09490 vs. NCBI nr
Match: TYK08201.1 (40S ribosomal protein S15-4 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-06
Identity = 34/84 (40.48%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 129 KEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEV 188
           KE+++ ++  Q++++ +L  + EV+N R + K   EKQSQE L+KN PP ISLE++D +V
Sbjct: 172 KEDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADV 231

Query: 189 DIDKIVEYAINHEKEDSDRDGKGK 213
           D +K +E     E++D+ R+ K K
Sbjct: 232 DKEKEIEDNEETEEDDNHRENKSK 255

[Close]

BLAST of Moc10g09490 vs. NCBI nr
Match: TYK22453.1 (uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-06
Identity = 34/84 (40.48%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 129 KEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEV 188
           KE+++ ++  Q++++ +L  + EV+N R + K   EKQSQE L+KN PP ISLE++D +V
Sbjct: 172 KEDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADV 231

Query: 189 DIDKIVEYAINHEKEDSDRDGKGK 213
           D +K +E     E++D+ R+ K K
Sbjct: 232 DKEKEIEDNEETEEDDNHRENKSK 255

[Close]

BLAST of Moc10g09490 vs. NCBI nr
Match: KAA0063839.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-06
Identity = 34/84 (40.48%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 129 KEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEV 188
           KE++  ++  Q++++ +L  + EV+N R + K   EKQSQE L+KN PP ISLE++D +V
Sbjct: 112 KEDLNCLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADV 171

Query: 189 DIDKIVEYAINHEKEDSDRDGKGK 213
           D +K +E     E++D+ R+ K K
Sbjct: 172 DKEKEIEDNEETEEDDNHRENKSK 195

[Close]

BLAST of Moc10g09490 vs. ExPASy TrEMBL
Match: A0A6J1DUB5 (cilia- and flagella-associated protein 251-like OS=Momordica charantia OX=3673 GN=LOC111023544 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.4e-44
Identity = 101/117 (86.32%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 96  NDDPNNMDDMAEGINIEEKEGTETHGSSKSLTLKEEIQEIRSVQKKMLGMLTYILEVIND 155
           +DDPNNM DMAEG NIEE+E TETHGSSKSLTLKE+IQEIRSVQK+M GMLT ILEVIND
Sbjct: 8   DDDPNNMYDMAEGRNIEEEERTETHGSSKSLTLKEKIQEIRSVQKQMPGMLTSILEVIND 67

Query: 156 RFAPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKIVEYAINHEKEDSDRDGKGK 213
           RF PKSNIEKQSQESLQKNVPPS SL+LLD+EVDIDKIV+YAINHEKED+D+DGKGK
Sbjct: 68  RFPPKSNIEKQSQESLQKNVPPSRSLKLLDKEVDIDKIVKYAINHEKEDADQDGKGK 124

[Close]

BLAST of Moc10g09490 vs. ExPASy TrEMBL
Match: A0A5A7VIA9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00090 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.1e-07
Identity = 34/84 (40.48%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 129 KEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEV 188
           KE+++ ++  Q++++ +L  + EV+N R + K   EKQSQE L+KN PP ISLE++D +V
Sbjct: 172 KEDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADV 231

Query: 189 DIDKIVEYAINHEKEDSDRDGKGK 213
           D +K +E     E++D+ R+ K K
Sbjct: 232 DKEKEIEDNEETEEDDNHRENKSK 255

[Close]

BLAST of Moc10g09490 vs. ExPASy TrEMBL
Match: A0A5D3DFX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3009G00010 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.1e-07
Identity = 34/84 (40.48%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 129 KEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEV 188
           KE+++ ++  Q++++ +L  + EV+N R + K   EKQSQE L+KN PP ISLE++D +V
Sbjct: 172 KEDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADV 231

Query: 189 DIDKIVEYAINHEKEDSDRDGKGK 213
           D +K +E     E++D+ R+ K K
Sbjct: 232 DKEKEIEDNEETEEDDNHRENKSK 255

[Close]

BLAST of Moc10g09490 vs. ExPASy TrEMBL
Match: A0A5D3C8N2 (40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00170 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.1e-07
Identity = 34/84 (40.48%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 129 KEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEV 188
           KE+++ ++  Q++++ +L  + EV+N R + K   EKQSQE L+KN PP ISLE++D +V
Sbjct: 172 KEDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADV 231

Query: 189 DIDKIVEYAINHEKEDSDRDGKGK 213
           D +K +E     E++D+ R+ K K
Sbjct: 232 DKEKEIEDNEETEEDDNHRENKSK 255

[Close]

BLAST of Moc10g09490 vs. ExPASy TrEMBL
Match: A0A5A7VE89 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00660 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06
Identity = 34/84 (40.48%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 129 KEEIQEIRSVQKKMLGMLTYILEVINDRFAPKSNIEKQSQESLQKNVPPSISLELLDEEV 188
           KE++  ++  Q++++ +L  + EV+N R + K   EKQSQE L+KN PP ISLE++D +V
Sbjct: 112 KEDLNCLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADV 171

Query: 189 DIDKIVEYAINHEKEDSDRDGKGK 213
           D +K +E     E++D+ R+ K K
Sbjct: 172 DKEKEIEDNEETEEDDNHRENKSK 195

The following BLAST results are available for this feature:

BLAST of Moc10g09490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156699.1	1.1e-43	86.32	cilia- and flagella-associated protein 251-like [Momordica charantia]	[more]
KAA0031317.1	1.9e-06	40.48	uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa] >KAA0...	[more]
TYK08201.1	1.9e-06	40.48	40S ribosomal protein S15-4 [Cucumis melo var. makuwa]	[more]
TYK22453.1	1.9e-06	40.48	uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa]	[more]
KAA0063839.1	3.2e-06	40.48	protein Ycf2-like [Cucumis melo var. makuwa]	[more]

BLAST of Moc10g09490 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc10g09490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUB5	5.4e-44	86.32	cilia- and flagella-associated protein 251-like OS=Momordica charantia OX=3673 G...	[more]
A0A5A7VIA9	9.1e-07	40.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DFX6	9.1e-07	40.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C8N2	9.1e-07	40.48	40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7VE89	1.6e-06	40.48	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00...	[more]

BLAST of Moc10g09490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g09490.1	Moc10g09490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005840	ribosome