Moc10g09310 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g09310
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L27
Location	chr10: 6920571 .. 6922538 (-)
RNA-Seq Expression	Moc10g09310
Synteny	Moc10g09310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAGTTTCTCAAGCCGAACAAGGCCGTCGTCGTTCTTCAAGGCCGCTATGCCGGCCGGAAGGCGGTGATAATTCGCGCCTTCGACGACGGCACCCGAGATCGGGCCTATGGCCACTGCTTGGTTGCGGGAATCAAGAAGTATCCGAGCAAGGTCATCCGCAAGGACTCTTCTAAGAAGACCGCCAAGAAATCGCGAGTCAAGGCCTTCGTCAAGCTCGTCAACTACAGGCATCTAATGCCCACCAGGTACACTCTCGATGTAGATCTTAAGGATGTCGTCACCATCGATTCCTTGCAGTCGAAGGACAAGAAGGTTACGGCCGCTAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACGGGCAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCTGAAGAGGCTCGTTCAGTTATGGGTTTGTTCTGGATTTTCATATTAGGTTACTGAGAAACTTTTTTCCCTCTTTTTTTCAAGTAATCGTAGGTTCCATGTTAAGAAGGTTGTTTATTTTTGGTGTTTAAGTCTTTTCTGGACGTACTTTAATCGTTTGAATGAGGAATTTCTGAAGTTATAATGCTACCTACATTTGAGACTTCACTTATCTATATTCGTATTTTGTTCCTGGGTTTTGTGGGAATATTGTTATTGAATATTGAGTTATTGTTTCGCTGAAATTTTATGAGCTATACGTTTCTTTAGAAGTAGAAGTTTGGATTCTTGCTGAGACAAACACTTCAGTAACTATTAGATAAGTCTAACCTAAATCTCATGGGATAAGCAGTGGATGATTAATGATTTGAGAAAAGAATTACTCAGATGCTTAATATTATTCTTAGCTTGGTCGAGGGGATATTTTATGGTTTGCTTGAAATACATTTCAATCTGTTGAATTAGTATTTAATGGCTGAAGCCGCTACATATATTGTTGTGGGCAGTTTCATATAGCTCTATGGTTTACGAATGACCTTGATACATAAGGAGACATGTATGGACAATTTGTGGCTTGTGGTCTTATTTTGATTGTTGTTATGGGTGTAAGTGTGTTGGTTCAGCCAAAATCCGTGAGACGACTTGTTTAAGATAAACTTTAAAGTTAAAACTAATGCTTAAAGCCTTAAACCAACCTGTTGGTGAACTGCATCACTCACTGCGGCTCAAATGATATTTATTGGTCAAACTGGTTGTATCAACTTTGTAATTTGTTTTTGAGGTGAGATAGGCTTTTAACAATGCTTACTTTGCAGCCAATTTGTTTATTTATAGTTTAGCTAGCTGATACTTTGGGATGATTGAATGAATATGTTCTTCTCTACTTGATGGAACTTGGAAATTATACTTTTAATATTTTGATTTGTTGAGGAAATGCAGGATTATTGAACATGGGAGTTGAATCTTAATTTTACCTAATTGGATATGATAGAATCATCTTTATTAACAAATTGTTGTATATTGATCTCATATGTGAGTGGTGAAAAAACTAAACTGTATTTCCTTTCATTGCATCCTTCAATTATCAATTTAAAATATGTTAGAGTTTATCAATAATGATTTTTAACATGTTGGATGTACAGATATTTGGTTATGTAAAAACAATAGAAACATATACAGTGTGTTGGAGATGTTATTATACTAATTTGAGCATAACTGAGCATAAATCAATTAGGTAAGACATTTAATTTCATTCCTACATCCCGACCAAAATGTCATGAGTTTGAATCTCCACCCTCACCTGTTATCCTACTTATGTTTTTGATTGGCTCGTGTATAGTTAATTGTTCTCCCCTTAAAGAGTATCACTAAATGACTCTTTGTGTTAATGCCATGATTTCAAATGATGTTACAGAAACCATGTATTGTGCATTTTACACTGTACCTACTTCAATTGGTTCTGTATGCTGTTTCTTTTCTTTGTTTTGATCTATTTGGTGCTTGTGCTCAGGTTCGTCTGCCGGTAA

mRNA sequence

ATGGTGAAGTTTCTCAAGCCGAACAAGGCCGTCGTCGTTCTTCAAGGCCGCTATGCCGGCCGGAAGGCGGTGATAATTCGCGCCTTCGACGACGGCACCCGAGATCGGGCCTATGGCCACTGCTTGGTTGCGGGAATCAAGAAGTATCCGAGCAAGGTCATCCGCAAGGACTCTTCTAAGAAGACCGCCAAGAAATCGCGAGTCAAGGCCTTCGTCAAGCTCGTCAACTACAGGCATCTAATGCCCACCAGGTACACTCTCGATGTAGATCTTAAGGATGTCGTCACCATCGATTCCTTGCAGTCGAAGGACAAGAAGGTTACGGCCGCTAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACGGGCAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCGTCTGCCGGTAA

Coding sequence (CDS)

ATGGTGAAGTTTCTCAAGCCGAACAAGGCCGTCGTCGTTCTTCAAGGCCGCTATGCCGGCCGGAAGGCGGTGATAATTCGCGCCTTCGACGACGGCACCCGAGATCGGGCCTATGGCCACTGCTTGGTTGCGGGAATCAAGAAGTATCCGAGCAAGGTCATCCGCAAGGACTCTTCTAAGAAGACCGCCAAGAAATCGCGAGTCAAGGCCTTCGTCAAGCTCGTCAACTACAGGCATCTAATGCCCACCAGGTACACTCTCGATGTAGATCTTAAGGATGTCGTCACCATCGATTCCTTGCAGTCGAAGGACAAGAAGGTTACGGCCGCTAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACGGGCAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCGTCTGCCGGTAA

Protein sequence

MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRFVCR

Homology

[Close]

BLAST of Moc10g09310 vs. NCBI nr
Match: XP_004147739.1 (60S ribosomal protein L27 [Cucumis sativus] >KGN53499.1 hypothetical protein Csa_014739 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65
Identity = 131/135 (97.04%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. NCBI nr
Match: XP_004147740.1 (60S ribosomal protein L27 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 2.6e-65
Identity = 130/135 (96.30%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. NCBI nr
Match: KAE8649234.1 (hypothetical protein Csa_014974 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 2.6e-65
Identity = 130/135 (96.30%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 29  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 88

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 89  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 148

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 149 FKTGKNRWFFTKLRF 163

[Close]

BLAST of Moc10g09310 vs. NCBI nr
Match: XP_008451849.1 (PREDICTED: 60S ribosomal protein L27-like [Cucumis melo] >KAA0062918.1 60S ribosomal protein L27-like [Cucumis melo var. makuwa] >TYK16424.1 60S ribosomal protein L27-like [Cucumis melo var. makuwa])

HSP 1 Score: 257.7 bits (657), Expect = 5.8e-65
Identity = 130/135 (96.30%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. NCBI nr
Match: XP_008451854.1 (PREDICTED: 60S ribosomal protein L27 [Cucumis melo] >XP_008451855.1 PREDICTED: 60S ribosomal protein L27 [Cucumis melo] >KAA0062915.1 60S ribosomal protein L27 [Cucumis melo var. makuwa] >TYK16427.1 60S ribosomal protein L27 [Cucumis melo var. makuwa])

HSP 1 Score: 257.7 bits (657), Expect = 5.8e-65
Identity = 130/135 (96.30%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy Swiss-Prot
Match: Q05462 (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.8e-60
Identity = 115/135 (85.19%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV++LQGRYAG+KAVI++ FDDGTR++ YGHCLVAGIKK+PSKVI+KDS+K
Sbjct: 1   MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNY+HLMPTRYTLDVDLKD V  D LQSKDKKVTA KETKK  EER
Sbjct: 61  KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy Swiss-Prot
Match: Q8LCL3 (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 4.9e-59
Identity = 112/135 (82.96%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLK NKAV++LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYPSKVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+L+SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy Swiss-Prot
Match: P51419 (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 4.9e-59
Identity = 112/135 (82.96%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLK NKAV++LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYPSKVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy Swiss-Prot
Match: Q9SKX8 (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.6e-55
Identity = 102/135 (75.56%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVK +KP KAV++LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYPSKVIRKDS+K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++ SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy Swiss-Prot
Match: P41101 (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53
Identity = 107/139 (76.98%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           M KFLKPNKAV++LQG+YAGRKAVI+RAFD+GTRDR YGHCLVAGI +YP KVIRKDS+K
Sbjct: 1   MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDL----KDVVTIDSLQSKDKKVTAAKETKKR 120
           K  KKSRVKAF+KLVNY H+MPTRYTLD DL    KDVV  D LQ++DKKVT A+ TK R
Sbjct: 61  KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVT-ARRTKAR 120

Query: 121 FEERFKTGKNRWFFTKLRF 136
             ERFKTGKNRWFFTKLRF
Sbjct: 121 LAERFKTGKNRWFFTKLRF 138

[Close]

BLAST of Moc10g09310 vs. ExPASy TrEMBL
Match: A0A0A0KXF9 (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G061860 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 9.6e-66
Identity = 131/135 (97.04%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy TrEMBL
Match: A0A0A0KVB4 (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G062360 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 130/135 (96.30%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy TrEMBL
Match: A0A1S3BSF6 (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493018 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 130/135 (96.30%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy TrEMBL
Match: A0A5A7V5M7 (60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002210 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 130/135 (96.30%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. ExPASy TrEMBL
Match: A0A5A7VAJ2 (60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002240 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 130/135 (96.30%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLKPNKAV+VLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYP+KVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. TAIR 10
Match: AT3G22230.1 (Ribosomal L27e protein family )

HSP 1 Score: 228.4 bits (581), Expect = 3.5e-60
Identity = 112/135 (82.96%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLK NKAV++LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYPSKVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+L+SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. TAIR 10
Match: AT4G15000.1 (Ribosomal L27e protein family )

HSP 1 Score: 228.4 bits (581), Expect = 3.5e-60
Identity = 112/135 (82.96%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLK NKAV++LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYPSKVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. TAIR 10
Match: AT2G32220.1 (Ribosomal L27e protein family )

HSP 1 Score: 214.2 bits (544), Expect = 6.8e-56
Identity = 102/135 (75.56%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVK +KP KAV++LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYPSKVIRKDS+K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++ SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc10g09310 vs. TAIR 10
Match: AT4G15000.2 (Ribosomal L27e protein family )

HSP 1 Score: 203.0 bits (515), Expect = 1.6e-52
Identity = 100/123 (81.30%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MVKFLKPNKAVVVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSSK 60
           MVKFLK NKAV++LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYPSKVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKT 124
           FKT
Sbjct: 121 FKT 123

The following BLAST results are available for this feature:

BLAST of Moc10g09310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147739.1	2.0e-65	97.04	60S ribosomal protein L27 [Cucumis sativus] >KGN53499.1 hypothetical protein Csa...	[more]
XP_004147740.1	2.6e-65	96.30	60S ribosomal protein L27 [Cucumis sativus]	[more]
KAE8649234.1	2.6e-65	96.30	hypothetical protein Csa_014974 [Cucumis sativus]	[more]
XP_008451849.1	5.8e-65	96.30	PREDICTED: 60S ribosomal protein L27-like [Cucumis melo] >KAA0062918.1 60S ribos...	[more]
XP_008451854.1	5.8e-65	96.30	PREDICTED: 60S ribosomal protein L27 [Cucumis melo] >XP_008451855.1 PREDICTED: 6...	[more]

BLAST of Moc10g09310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05462	5.8e-60	85.19	60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1	[more]
Q8LCL3	4.9e-59	82.96	60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2	[more]
P51419	4.9e-59	82.96	60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2	[more]
Q9SKX8	9.6e-55	75.56	60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1	[more]
P41101	5.3e-53	76.98	60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1	[more]

BLAST of Moc10g09310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXF9	9.6e-66	97.04	60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G061860 PE=3 SV=1	[more]
A0A0A0KVB4	1.3e-65	96.30	60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G062360 PE=3 SV=1	[more]
A0A1S3BSF6	2.8e-65	96.30	60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493018 PE=3 SV=1	[more]
A0A5A7V5M7	2.8e-65	96.30	60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7VAJ2	2.8e-65	96.30	60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Moc10g09310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22230.1	3.5e-60	82.96	Ribosomal L27e protein family	[more]
AT4G15000.1	3.5e-60	82.96	Ribosomal L27e protein family	[more]
AT2G32220.1	6.8e-56	75.56	Ribosomal L27e protein family	[more]
AT4G15000.2	1.6e-52	81.30	Ribosomal L27e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	PANTHER	PTHR10497:SF16	60S RIBOSOMAL PROTEIN L27	coord: 1..135
IPR038655	Ribosomal protein L27e superfamily	GENE3D	2.30.30.770		coord: 1..135 e-value: 8.4E-60 score: 202.8
IPR001141	Ribosomal protein L27e	PFAM	PF01777	Ribosomal_L27e	coord: 52..135 e-value: 3.4E-31 score: 107.5
IPR001141	Ribosomal protein L27e	PANTHER	PTHR10497	60S RIBOSOMAL PROTEIN L27	coord: 1..135
IPR041991	Eukaryotic Ribosomal Protein L27, KOW domain	CDD	cd06090	KOW_RPL27	coord: 6..88 e-value: 1.00054E-40 score: 128.84
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 2..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g09310.1	Moc10g09310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome