Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGCAACTTGATTTCAAGCCTGAACAGAAAGCTGCAGGCGGTCGAAATTAGCAATCCCAGTCGCAGAAGACGAACGAAGAAGACGAGTTACGTTTACAGAGACGATTTGAGCAAGAAGAATCAGCCGCCGTCGCCGTCTCAGCGGGAGGCGGAAATCAAGAAAGTGAAGAAGAGAGTGCGATTTGCAGAGACGGAGCCGGTGATAATCGCCATTGACGGAGAGGAACAGAGCGCGGAGGAGGAGGAAACAGAGAAGAAGGCAGTGAGAATTACGGTGAAAATGACGAAGCAAGAAGCGAATCGGATGCTGTCGAGGTGCTCCGATGGCGGCGTTCTCGAATTCAGAGATGTGGCTTGCGAGCTCATGCGGATTCCTGCTGCTCGAGTTACCTCTGCTGTGGTCGCCAATTGA
mRNA sequence
ATGATCAGCAACTTGATTTCAAGCCTGAACAGAAAGCTGCAGGCGGTCGAAATTAGCAATCCCAGTCGCAGAAGACGAACGAAGAAGACGAGTTACGTTTACAGAGACGATTTGAGCAAGAAGAATCAGCCGCCGTCGCCGTCTCAGCGGGAGGCGGAAATCAAGAAAGTGAAGAAGAGAGTGCGATTTGCAGAGACGGAGCCGGTGATAATCGCCATTGACGGAGAGGAACAGAGCGCGGAGGAGGAGGAAACAGAGAAGAAGGCAGTGAGAATTACGGTGAAAATGACGAAGCAAGAAGCGAATCGGATGCTGTCGAGGTGCTCCGATGGCGGCGTTCTCGAATTCAGAGATGTGGCTTGCGAGCTCATGCGGATTCCTGCTGCTCGAGTTACCTCTGCTGTGGTCGCCAATTGA
Coding sequence (CDS)
ATGATCAGCAACTTGATTTCAAGCCTGAACAGAAAGCTGCAGGCGGTCGAAATTAGCAATCCCAGTCGCAGAAGACGAACGAAGAAGACGAGTTACGTTTACAGAGACGATTTGAGCAAGAAGAATCAGCCGCCGTCGCCGTCTCAGCGGGAGGCGGAAATCAAGAAAGTGAAGAAGAGAGTGCGATTTGCAGAGACGGAGCCGGTGATAATCGCCATTGACGGAGAGGAACAGAGCGCGGAGGAGGAGGAAACAGAGAAGAAGGCAGTGAGAATTACGGTGAAAATGACGAAGCAAGAAGCGAATCGGATGCTGTCGAGGTGCTCCGATGGCGGCGTTCTCGAATTCAGAGATGTGGCTTGCGAGCTCATGCGGATTCCTGCTGCTCGAGTTACCTCTGCTGTGGTCGCCAATTGA
Protein sequence
MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN
Homology
BLAST of Moc10g08570 vs. NCBI nr
Match:
XP_038906331.1 (uncharacterized protein LOC120092170 [Benincasa hispida])
HSP 1 Score: 191.4 bits (485), Expect = 5.1e-45
Identity = 110/140 (78.57%), Postives = 122/140 (87.14%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQ--PPSPSQREAEIKKVK 60
MISN I SLN+KLQAVEISN R RRTKKT+YVYRDDLSKK Q PPS SQ + EIKKVK
Sbjct: 1 MISNFILSLNKKLQAVEISN--RCRRTKKTTYVYRDDLSKKKQSPPPSSSQPQPEIKKVK 60
Query: 61 KRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRD 120
KRVRFA+TEPVIIAI +E+ + EEETEKK VRITVK+TK+EANRMLSRCSDGGVLEF D
Sbjct: 61 KRVRFADTEPVIIAITDKEERSTEEETEKKVVRITVKLTKEEANRMLSRCSDGGVLEFGD 120
Query: 121 VACELMRIPAARVTSAVVAN 139
VACELMRIPA RV+S++VAN
Sbjct: 121 VACELMRIPATRVSSSMVAN 138
BLAST of Moc10g08570 vs. NCBI nr
Match:
KAG7015140.1 (hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 188.7 bits (478), Expect = 3.3e-44
Identity = 110/138 (79.71%), Postives = 121/138 (87.68%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKR 60
MI NLISSLN+KLQAVEISN R RRTKKT+ VYR D+SKK QP PSQ + EI+KVKKR
Sbjct: 1 MIGNLISSLNKKLQAVEISN--RCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKR 60
Query: 61 VRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRDVA 120
VRFA+TEPVIIAID EE+S EEETEKK VRITVK+TKQEANRMLSRCSDGGVLEFRDVA
Sbjct: 61 VRFADTEPVIIAIDREERST-EEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFRDVA 120
Query: 121 CELMRIPAARVTSAVVAN 139
ELMRIPAARV+S++V N
Sbjct: 121 SELMRIPAARVSSSMVVN 135
BLAST of Moc10g08570 vs. NCBI nr
Match:
KAG6577140.1 (hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 109/138 (78.99%), Postives = 120/138 (86.96%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKR 60
MI NLISSLN+KLQAVEISN R RRTKKT+ VYR D+SKK QP P Q + EI+KVKKR
Sbjct: 1 MIGNLISSLNKKLQAVEISN--RCRRTKKTTNVYRGDMSKKKQPQLPPQGKPEIEKVKKR 60
Query: 61 VRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRDVA 120
VRFA+TEPVIIAID EE+S EEETEKK VRITVK+TKQEANRMLSRCSDGGVLEFRDVA
Sbjct: 61 VRFADTEPVIIAIDREERST-EEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFRDVA 120
Query: 121 CELMRIPAARVTSAVVAN 139
ELMRIPAARV+S++V N
Sbjct: 121 SELMRIPAARVSSSMVVN 135
BLAST of Moc10g08570 vs. NCBI nr
Match:
XP_022985430.1 (uncharacterized protein LOC111483436 [Cucurbita maxima])
HSP 1 Score: 182.6 bits (462), Expect = 2.4e-42
Identity = 109/137 (79.56%), Postives = 120/137 (87.59%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQP--PSPSQREAEIKKVK 60
MI NLISSLN+KLQAVEISN R RRTKKT+ VYR D+SKK QP PSPSQ + EI+KVK
Sbjct: 1 MIGNLISSLNKKLQAVEISN--RCRRTKKTTNVYRRDMSKKKQPQSPSPSQGKPEIEKVK 60
Query: 61 KRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRD 120
KRVRFA+TEPVIIAID EE+S EEETEKK VRITVK+TKQEANRMLSRCSDGGVLEF D
Sbjct: 61 KRVRFADTEPVIIAIDREERST-EEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGD 120
Query: 121 VACELMRIPAARVTSAV 136
VA ELMRIPAARV+S++
Sbjct: 121 VASELMRIPAARVSSSM 134
BLAST of Moc10g08570 vs. NCBI nr
Match:
XP_022931429.1 (uncharacterized protein LOC111437608 [Cucurbita moschata])
HSP 1 Score: 182.6 bits (462), Expect = 2.4e-42
Identity = 107/135 (79.26%), Postives = 118/135 (87.41%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKR 60
MI NLISSLN+KLQAVEISN R RRTKKT+ VYR D+SKK QP PSQ + EI+KVKKR
Sbjct: 1 MIGNLISSLNKKLQAVEISN--RCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKR 60
Query: 61 VRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRDVA 120
VRFA+TEPVIIAID EE+S EEETEKK VRITVK+TKQEANRMLSRCSDGGVLEF DVA
Sbjct: 61 VRFADTEPVIIAIDREERST-EEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGDVA 120
Query: 121 CELMRIPAARVTSAV 136
ELMRIPAARV+S++
Sbjct: 121 SELMRIPAARVSSSM 132
BLAST of Moc10g08570 vs. ExPASy TrEMBL
Match:
A0A6J1JBA8 (uncharacterized protein LOC111483436 OS=Cucurbita maxima OX=3661 GN=LOC111483436 PE=4 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 109/137 (79.56%), Postives = 120/137 (87.59%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQP--PSPSQREAEIKKVK 60
MI NLISSLN+KLQAVEISN R RRTKKT+ VYR D+SKK QP PSPSQ + EI+KVK
Sbjct: 1 MIGNLISSLNKKLQAVEISN--RCRRTKKTTNVYRRDMSKKKQPQSPSPSQGKPEIEKVK 60
Query: 61 KRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRD 120
KRVRFA+TEPVIIAID EE+S EEETEKK VRITVK+TKQEANRMLSRCSDGGVLEF D
Sbjct: 61 KRVRFADTEPVIIAIDREERST-EEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGD 120
Query: 121 VACELMRIPAARVTSAV 136
VA ELMRIPAARV+S++
Sbjct: 121 VASELMRIPAARVSSSM 134
BLAST of Moc10g08570 vs. ExPASy TrEMBL
Match:
A0A6J1EU86 (uncharacterized protein LOC111437608 OS=Cucurbita moschata OX=3662 GN=LOC111437608 PE=4 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 107/135 (79.26%), Postives = 118/135 (87.41%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKR 60
MI NLISSLN+KLQAVEISN R RRTKKT+ VYR D+SKK QP PSQ + EI+KVKKR
Sbjct: 1 MIGNLISSLNKKLQAVEISN--RCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKR 60
Query: 61 VRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRDVA 120
VRFA+TEPVIIAID EE+S EEETEKK VRITVK+TKQEANRMLSRCSDGGVLEF DVA
Sbjct: 61 VRFADTEPVIIAIDREERST-EEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGDVA 120
Query: 121 CELMRIPAARVTSAV 136
ELMRIPAARV+S++
Sbjct: 121 SELMRIPAARVSSSM 132
BLAST of Moc10g08570 vs. ExPASy TrEMBL
Match:
A0A5D3D246 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003900 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.1e-40
Identity = 104/143 (72.73%), Postives = 118/143 (82.52%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIK 60
MISNLISSLN+KLQAVEISN R +RTKKT+YVYRDDL+KK P SP + AEIK
Sbjct: 1 MISNLISSLNKKLQAVEISN--RCKRTKKTTYVYRDDLTKKKHSPPLSSSSPQHQPAEIK 60
Query: 61 KVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLE 120
KVKKRVRFA+TEPVIIAI + + EEEETEKK VRITVK+TKQEANRMLSRCS+ GVLE
Sbjct: 61 KVKKRVRFADTEPVIIAISTDREE-EEEETEKKVVRITVKLTKQEANRMLSRCSNDGVLE 120
Query: 121 FRDVACELMRIPAARVTSAVVAN 139
F DVA EL+RIP RV+S++VAN
Sbjct: 121 FGDVASELLRIPPTRVSSSLVAN 140
BLAST of Moc10g08570 vs. ExPASy TrEMBL
Match:
A0A1S3BS40 (uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.1e-40
Identity = 104/143 (72.73%), Postives = 118/143 (82.52%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIK 60
MISNLISSLN+KLQAVEISN R +RTKKT+YVYRDDL+KK P SP + AEIK
Sbjct: 1 MISNLISSLNKKLQAVEISN--RCKRTKKTTYVYRDDLTKKKHSPPLSSSSPQHQPAEIK 60
Query: 61 KVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLE 120
KVKKRVRFA+TEPVIIAI + + EEEETEKK VRITVK+TKQEANRMLSRCS+ GVLE
Sbjct: 61 KVKKRVRFADTEPVIIAISTDREE-EEEETEKKVVRITVKLTKQEANRMLSRCSNDGVLE 120
Query: 121 FRDVACELMRIPAARVTSAVVAN 139
F DVA EL+RIP RV+S++VAN
Sbjct: 121 FGDVASELLRIPPTRVSSSLVAN 140
BLAST of Moc10g08570 vs. ExPASy TrEMBL
Match:
A0A0A0KYE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1)
HSP 1 Score: 171.8 bits (434), Expect = 2.0e-39
Identity = 104/144 (72.22%), Postives = 117/144 (81.25%), Query Frame = 0
Query: 1 MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIK 60
MISNLISSLN+KLQAVEIS SR +RTKKT+YVYRD+L+KKN P SP + EIK
Sbjct: 1 MISNLISSLNKKLQAVEIS--SRCKRTKKTAYVYRDNLTKKNHSPPSSSSSPQHQPEEIK 60
Query: 61 KVKKRVRFAETEPVIIAIDGEEQSAE-EEETEKKAVRITVKMTKQEANRMLSRCSDGGVL 120
KVKKRVRFA+TEPVIIAI + + E E ETEKK VRITVK+TKQEANRMLSRCS+GGVL
Sbjct: 61 KVKKRVRFADTEPVIIAISTDREEEELEVETEKKVVRITVKLTKQEANRMLSRCSNGGVL 120
Query: 121 EFRDVACELMRIPAARVTSAVVAN 139
EF DVA ELMRIP RV S++VAN
Sbjct: 121 EFGDVASELMRIPPTRVRSSLVAN 142
BLAST of Moc10g08570 vs. TAIR 10
Match:
AT4G23880.1 (unknown protein; Has 73 Blast hits to 69 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2; Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). )
HSP 1 Score: 41.2 bits (95), Expect = 7.9e-04
Identity = 20/61 (32.79%), Postives = 39/61 (63.93%), Query Frame = 0
Query: 76 EEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV 135
E++S + E +++ VR+ +KMTK EA R+LS+C + VL+ + ++ +P ++ A+
Sbjct: 120 EKESLKMVEGKEEVVRVKIKMTKHEAQRLLSKCKNDSVLKLEHLMDQIAHVPVHQLQVAM 179
Query: 136 V 137
V
Sbjct: 180 V 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038906331.1 | 5.1e-45 | 78.57 | uncharacterized protein LOC120092170 [Benincasa hispida] | [more] |
KAG7015140.1 | 3.3e-44 | 79.71 | hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6577140.1 | 1.2e-43 | 78.99 | hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022985430.1 | 2.4e-42 | 79.56 | uncharacterized protein LOC111483436 [Cucurbita maxima] | [more] |
XP_022931429.1 | 2.4e-42 | 79.26 | uncharacterized protein LOC111437608 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JBA8 | 1.1e-42 | 79.56 | uncharacterized protein LOC111483436 OS=Cucurbita maxima OX=3661 GN=LOC111483436... | [more] |
A0A6J1EU86 | 1.1e-42 | 79.26 | uncharacterized protein LOC111437608 OS=Cucurbita moschata OX=3662 GN=LOC1114376... | [more] |
A0A5D3D246 | 4.1e-40 | 72.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BS40 | 4.1e-40 | 72.73 | uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=... | [more] |
A0A0A0KYE1 | 2.0e-39 | 72.22 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G23880.1 | 7.9e-04 | 32.79 | unknown protein; Has 73 Blast hits to 69 proteins in 22 species: Archae - 0; Bac... | [more] |