Moc10g07490 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g07490
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	GATA transcription factor 19-like
Location	chr10: 5489770 .. 5491192 (+)
RNA-Seq Expression	Moc10g07490
Synteny	Moc10g07490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGTCCTTTTTCCGTCTTCTTATCGGTGCCCAGCCACGGCGGCGGAGGCGGCGGCGGTGGGTCCCACGACACCATGGAGATGATGTATTCTTCTTCTAATTACGGCTCTTCATATTCCTATTCCTCTCCTCCTTCGTCTTCCGTTGATTGTACGCTCTCTCTTGGAACTCCCTCCACGCGTTCCACGACCCAATTAGACGACGTCCACCACCGTGGCGGCGGCGGACGGCGGCCGGCGGCTTCCTATGTCTCTAACTTCTGCTGGGATTTGTTGCATACTAAACAAAAGAGTGCCGCCCGTGGCGGTGGCAATGCTAATAGCGCCGCCGTGGGCGCCTCCGCGGGCTGTGGTGATCCGCTTCTTGCCCGACGGTGTGCCAATTGCGACACCACTTCTACTCCGCTCTGGAGGAATGGCCCCAAAGGCCCTAAGGTACATTTTAATTTTACTTTACGCCTCAAAATTCAACCTCTTTTTTCGATTGAGAGGTGATTTTAGCCTTTTCGATCGGGTGTTACTGAGAATGATTTTAGCCTTCTCAAAATTACTCGTACTTCCATTTTGATCATATTTGAGAAGTTAAAAAAAATTGATTTTGGAATCTAAAGTCATTCAAATTGTTTTTTAATGTATCGTTCTAGGTTAATTTTGAAAAATTAATTAGACTTAAATTTCTTTTATTCAAAATCATTCCTTCTACCGCACTGTCAAATACCTTTCAACTCGAGAACGTAAGCAATCACCGTCAGACATGTTCTTAAATTGTTTATTTGGCTTAGGATGAGAAAAGATTTTCAACAAATATAATTCAGTCGAAAAAGAAAATAATTTTTTACTAATATAACATTTCCATCCTGATTTATAAATTAAAAAAATTATCTTTGCTTTTCTACCATTTTCTTGAATTATTTTTTTTTCCACTCTCTAAAAGTGGTAGGAGGAACTAATACTCCTAAAACATGATTTAGTTTAAGGGAATAAAAAACAGCAGAATTGATTTGAAATGGATCAAGCTTCAAAACCTCAGATTTCTGATTGATTAATATTAATTTTTGTTTGTCATAAAATTTGACTGCAGTCACTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACATCACGGCGGCGGAACCAAACCACCACCACCACCATCACATGTTCGGCGGGAGCTATACAAATTCCACGTCGTGGGTCCCGCACCAGCACTCGCCGGCGACGACCCAGAAACTTCCGTGCCTGTCGCCGGCGGGCATTAGCAACGAATCAATGTTCATCGGAAACGACGACGTTCGAAGAAGCGAACCCGAAACCGGCATCTCCTTCCTGTCTTGGCGGCTTAACGTTACCGATCACCGGCCCAGCCTGGTCCATGACTTCACAAGATCATGA

mRNA sequence

ATGAGTGCCGCCCGTGGCGGTGGCAATGCTAATAGCGCCGCCGTGGGCGCCTCCGCGGGCTGTGGTGATCCGCTTCTTGCCCGACGGTGTGCCAATTGCGACACCACTTCTACTCCGCTCTGGAGGAATGGCCCCAAAGGCCCTAAGTCACTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACATCACGGCGGCGGAACCAAACCACCACCACCACCATCACATGTTCGGCGGGAGCTATACAAATTCCACGTCGTGGGTCCCGCACCAGCACTCGCCGGCGACGACCCAGAAACTTCCGTGCCTGTCGCCGGCGGGCATTAGCAACGAATCAATGTTCATCGGAAACGACGACGTTCGAAGAAGCGAACCCGAAACCGGCATCTCCTTCCTGTCTTGGCGGCTTAACGTTACCGATCACCGGCCCAGCCTGGTCCATGACTTCACAAGATCATGA

Coding sequence (CDS)

ATGAGTGCCGCCCGTGGCGGTGGCAATGCTAATAGCGCCGCCGTGGGCGCCTCCGCGGGCTGTGGTGATCCGCTTCTTGCCCGACGGTGTGCCAATTGCGACACCACTTCTACTCCGCTCTGGAGGAATGGCCCCAAAGGCCCTAAGTCACTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACATCACGGCGGCGGAACCAAACCACCACCACCACCATCACATGTTCGGCGGGAGCTATACAAATTCCACGTCGTGGGTCCCGCACCAGCACTCGCCGGCGACGACCCAGAAACTTCCGTGCCTGTCGCCGGCGGGCATTAGCAACGAATCAATGTTCATCGGAAACGACGACGTTCGAAGAAGCGAACCCGAAACCGGCATCTCCTTCCTGTCTTGGCGGCTTAACGTTACCGATCACCGGCCCAGCCTGGTCCATGACTTCACAAGATCATGA

Protein sequence

MSAARGGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRAAATVNITAAEPNHHHHHHMFGGSYTNSTSWVPHQHSPATTQKLPCLSPAGISNESMFIGNDDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTRS

Homology

[Close]

BLAST of Moc10g07490 vs. NCBI nr
Match: XP_023533953.1 (GATA transcription factor 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-60
Identity = 123/165 (74.55%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 5   RGGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEER 64
           +  G + ++   A    GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEER
Sbjct: 99  KSAGRSTASNAAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 158

Query: 65  RAAATVNIT----AAEPNHHH----HHHMFGGSYTNST-SWVPHQHSPATTQKLPCLSPA 124
           RAAATVN T    AAE N+HH    HH MF G+YTNST +WVPH HSP  TQKLPCLS A
Sbjct: 159 RAAATVNCTATTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPH-HSPVATQKLPCLSAA 218

Query: 125 GISNESMFIGNDDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTR 161
            I+NESMFIGNDDVRR+E E GIS+LSWRLNVTDHRPSLVHDFTR
Sbjct: 219 AINNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 262

[Close]

BLAST of Moc10g07490 vs. NCBI nr
Match: KAG6600583.1 (GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031223.1 GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241.5 bits (615), Expect = 5.0e-60
Identity = 123/165 (74.55%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 5   RGGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEER 64
           +  G + ++   A    GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEER
Sbjct: 101 KSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 160

Query: 65  RAAATVNIT----AAEPNHHH----HHHMFGGSYTNST-SWVPHQHSPATTQKLPCLSPA 124
           RAAATVN T    AAE N+HH    HH MF G+YTNST +WVPH HSP  TQKLPCLS A
Sbjct: 161 RAAATVNCTATAMAAESNNHHHLHQHHQMFNGNYTNSTATWVPH-HSPVATQKLPCLSAA 220

Query: 125 GISNESMFIGNDDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTR 161
            I+NESMFIGNDDVRR+E E GIS+LSWRLNVTDHRPSLVHDFTR
Sbjct: 221 AINNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 264

[Close]

BLAST of Moc10g07490 vs. NCBI nr
Match: XP_022942846.1 (GATA transcription factor 19-like [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 5.0e-60
Identity = 123/165 (74.55%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 5   RGGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEER 64
           +  G + ++   A    GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEER
Sbjct: 102 KSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 161

Query: 65  RAAATVNIT----AAEPNHHH----HHHMFGGSYTNST-SWVPHQHSPATTQKLPCLSPA 124
           RAAATVN T    AAE N+HH    HH MF G+YTNST +WVPH HSP  TQKLPCLS A
Sbjct: 162 RAAATVNCTATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPH-HSPVATQKLPCLSAA 221

Query: 125 GISNESMFIGNDDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTR 161
            I+NESMFIGNDDVRR+E E GIS+LSWRLNVTDHRPSLVHDFTR
Sbjct: 222 AINNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]

BLAST of Moc10g07490 vs. NCBI nr
Match: XP_022982306.1 (GATA transcription factor 19-like [Cucurbita maxima])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 123/166 (74.10%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 5   RGGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEER 64
           +  G + ++   A    GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEER
Sbjct: 101 KSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 160

Query: 65  RAAATVNIT----AAEPNHHH----HHHMFGGSYTNST-SWVPHQHSPATTQKLPCLS-P 124
           RAAATVN T    AAE N+HH    HH MF G+YTNS+ +WVPH HSP  TQKLPCLS  
Sbjct: 161 RAAATVNCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPH-HSPVATQKLPCLSAA 220

Query: 125 AGISNESMFIGNDDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTR 161
           A ISNESMFIGNDDVRR+E E GIS+LSWRLNVTDHRPSLVHDFTR
Sbjct: 221 AAISNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]

BLAST of Moc10g07490 vs. NCBI nr
Match: XP_004146553.2 (GATA transcription factor 18 isoform X1 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 2.5e-51
Identity = 116/161 (72.05%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 6   GGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERR 65
           GGG +N+    A +  GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR
Sbjct: 107 GGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 166

Query: 66  -AAATVNITAAEPNHHHHHH---MFGGSYTNSTSWVPHQHSPATTQKLPCLSPAGISNES 125
            AAATVN + AE NHHHHHH   MF GSYTNS +WVP Q  PATTQK PCLS A      
Sbjct: 167 AAAATVNSSVAESNHHHHHHHHPMFNGSYTNSNTWVP-QQLPATTQKHPCLSAA------ 226

Query: 126 MFIGNDDVRRSEPETGISFLSWRLNV--TDHRPSLVHDFTR 161
             IGN+DV    PE GISFLSWRLNV  TDHRP+LVHDFTR
Sbjct: 227 --IGNEDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 255

[Close]

BLAST of Moc10g07490 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-32
Identity = 91/174 (52.30%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 6   GGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERR 65
           GGG       G   G GD LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR
Sbjct: 135 GGGGG-----GGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 194

Query: 66  -AAATVN-ITAAEP------NHH-----HHHHMFGGSYTNSTSWVPHQHSPATTQKLPCL 125
             AAT N +  A P       HH     ++H     +  N T W  H HS   TQ++PC 
Sbjct: 195 TTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWA-HHHS---TQRVPCN 254

Query: 126 SPAGISNESMFIGN------DDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTR 161
            PA   NE  F+ +      ++V       G+ FLSWRLNV D R SLVHDFTR
Sbjct: 255 YPA---NEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]

BLAST of Moc10g07490 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 7.3e-30
Identity = 85/162 (52.47%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 11  NSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRAAATV 70
           N +  G   G G  LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA+   
Sbjct: 59  NGSKKGGGGG-GHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTAR 118

Query: 71  NIT-------AAEPNHHH-----HHHMFGGSYTNSTSWVPHQHSPATTQKLPCLSPAGIS 130
           N T       A  P   H     +++     Y +S+ W  HQH+   TQ++P  SPA  +
Sbjct: 119 NSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPW-HHQHN---TQRVPYYSPA--N 178

Query: 131 NESMFIGNDDVRRSEPE-TGISFLSWRLNVTDHRPSLVHDFT 160
           NE  ++  DDVR  + + T   FLSWRLNV D R  LVHDFT
Sbjct: 179 NEYSYV--DDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]

BLAST of Moc10g07490 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 8.9e-20
Identity = 72/155 (46.45%), Postives = 85/155 (54.84%), Query Frame = 0


Query: 7   GGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRA 66
           GGNA +++     G     L RRCA+CDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRA
Sbjct: 73  GGNAKTSSY--KKGGVAHSLPRRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRA 132

Query: 67  AATVNIT-------AAE-----------PNHHHHHHMFGGSYTNSTSWVPHQHSPATTQK 126
            A  N+T       AAE             + HHHH +  S   S SW  HQ+    TQ+
Sbjct: 133 TAR-NLTISGGGSSAAEVPVENSYNGGGNYYSHHHHHYASS---SPSWA-HQN----TQR 192

Query: 127 LPCLSPAGISNESMFIGNDDVRRSEPETGISFLSW 144
           +P  SP     E  ++ N         T  SF+SW
Sbjct: 193 VPYFSPVP-EMEYPYVDN--------VTASSFMSW 207

[Close]

BLAST of Moc10g07490 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-18
Identity = 46/63 (73.02%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 8   GNANSAAVGASAGCG-DPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRA 67
           G   + A   +AG G D LL RRCANC T STPLWRNGP+GPKSLCNACGIR+KKEERRA
Sbjct: 131 GRPATGAAKCAAGAGHDALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERRA 190

Query: 68  AAT 70
           AAT
Sbjct: 191 AAT 193

[Close]

BLAST of Moc10g07490 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-18
Identity = 46/63 (73.02%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 8   GNANSAAVGASAGCG-DPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRA 67
           G   + A   +AG G D LL RRCANC T STPLWRNGP+GPKSLCNACGIR+KKEERRA
Sbjct: 131 GRPATGAAKCAAGAGHDALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERRA 190

Query: 68  AAT 70
           AAT
Sbjct: 191 AAT 193

[Close]

BLAST of Moc10g07490 vs. ExPASy TrEMBL
Match: A0A6J1FQ08 (GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 123/165 (74.55%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 5   RGGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEER 64
           +  G + ++   A    GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEER
Sbjct: 102 KSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 161

Query: 65  RAAATVNIT----AAEPNHHH----HHHMFGGSYTNST-SWVPHQHSPATTQKLPCLSPA 124
           RAAATVN T    AAE N+HH    HH MF G+YTNST +WVPH HSP  TQKLPCLS A
Sbjct: 162 RAAATVNCTATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPH-HSPVATQKLPCLSAA 221

Query: 125 GISNESMFIGNDDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTR 161
            I+NESMFIGNDDVRR+E E GIS+LSWRLNVTDHRPSLVHDFTR
Sbjct: 222 AINNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]

BLAST of Moc10g07490 vs. ExPASy TrEMBL
Match: A0A6J1IYZ2 (GATA transcription factor 19-like OS=Cucurbita maxima OX=3661 GN=LOC111481178 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.8e-59
Identity = 123/166 (74.10%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 5   RGGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEER 64
           +  G + ++   A    GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEER
Sbjct: 101 KSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 160

Query: 65  RAAATVNIT----AAEPNHHH----HHHMFGGSYTNST-SWVPHQHSPATTQKLPCLS-P 124
           RAAATVN T    AAE N+HH    HH MF G+YTNS+ +WVPH HSP  TQKLPCLS  
Sbjct: 161 RAAATVNCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPH-HSPVATQKLPCLSAA 220

Query: 125 AGISNESMFIGNDDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTR 161
           A ISNESMFIGNDDVRR+E E GIS+LSWRLNVTDHRPSLVHDFTR
Sbjct: 221 AAISNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]

BLAST of Moc10g07490 vs. ExPASy TrEMBL
Match: A0A0A0KY15 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.2e-51
Identity = 116/161 (72.05%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 6   GGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERR 65
           GGG +N+    A +  GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR
Sbjct: 107 GGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 166

Query: 66  -AAATVNITAAEPNHHHHHH---MFGGSYTNSTSWVPHQHSPATTQKLPCLSPAGISNES 125
            AAATVN + AE NHHHHHH   MF GSYTNS +WVP Q  PATTQK PCLS A      
Sbjct: 167 AAAATVNSSVAESNHHHHHHHHPMFNGSYTNSNTWVP-QQLPATTQKHPCLSAA------ 226

Query: 126 MFIGNDDVRRSEPETGISFLSWRLNV--TDHRPSLVHDFTR 161
             IGN+DV    PE GISFLSWRLNV  TDHRP+LVHDFTR
Sbjct: 227 --IGNEDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 255

[Close]

BLAST of Moc10g07490 vs. ExPASy TrEMBL
Match: A0A5D3CZ78 (GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005010 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.7e-50
Identity = 114/158 (72.15%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 6   GGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERR 65
           GG  +N+    A +  GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR
Sbjct: 78  GGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 137

Query: 66  -AAATVNITAAEPNHHHHHHMFGGSYTNSTSWVPHQHSPATTQKLPCLSPAGISNESMFI 125
            AAATVN + AE N HHHH MF GSYTNS++WVP Q  PATTQK PCLS A        I
Sbjct: 138 AAAATVNSSTAESN-HHHHSMFNGSYTNSSTWVP-QQLPATTQKHPCLSAA--------I 197

Query: 126 GNDDVRRSEPETGISFLSWRLNV--TDHRPSLVHDFTR 161
           GNDDV    PE GISFLSWRLNV  TDHRP+LVHDFTR
Sbjct: 198 GNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 222

[Close]

BLAST of Moc10g07490 vs. ExPASy TrEMBL
Match: A0A1S3BSF9 (GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.7e-50
Identity = 114/158 (72.15%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 6   GGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERR 65
           GG  +N+    A +  GDPLLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR
Sbjct: 110 GGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 169

Query: 66  -AAATVNITAAEPNHHHHHHMFGGSYTNSTSWVPHQHSPATTQKLPCLSPAGISNESMFI 125
            AAATVN + AE N HHHH MF GSYTNS++WVP Q  PATTQK PCLS A        I
Sbjct: 170 AAAATVNSSTAESN-HHHHSMFNGSYTNSSTWVP-QQLPATTQKHPCLSAA--------I 229

Query: 126 GNDDVRRSEPETGISFLSWRLNV--TDHRPSLVHDFTR 161
           GNDDV    PE GISFLSWRLNV  TDHRP+LVHDFTR
Sbjct: 230 GNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 254

[Close]

BLAST of Moc10g07490 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-33
Identity = 91/174 (52.30%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 6   GGGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERR 65
           GGG       G   G GD LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR
Sbjct: 135 GGGGG-----GGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 194

Query: 66  -AAATVN-ITAAEP------NHH-----HHHHMFGGSYTNSTSWVPHQHSPATTQKLPCL 125
             AAT N +  A P       HH     ++H     +  N T W  H HS   TQ++PC 
Sbjct: 195 TTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWA-HHHS---TQRVPCN 254

Query: 126 SPAGISNESMFIGN------DDVRRSEPETGISFLSWRLNVTDHRPSLVHDFTR 161
            PA   NE  F+ +      ++V       G+ FLSWRLNV D R SLVHDFTR
Sbjct: 255 YPA---NEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]

BLAST of Moc10g07490 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 131.7 bits (330), Expect = 5.2e-31
Identity = 85/162 (52.47%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 11  NSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRAAATV 70
           N +  G   G G  LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA+   
Sbjct: 59  NGSKKGGGGG-GHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTAR 118

Query: 71  NIT-------AAEPNHHH-----HHHMFGGSYTNSTSWVPHQHSPATTQKLPCLSPAGIS 130
           N T       A  P   H     +++     Y +S+ W  HQH+   TQ++P  SPA  +
Sbjct: 119 NSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPW-HHQHN---TQRVPYYSPA--N 178

Query: 131 NESMFIGNDDVRRSEPE-TGISFLSWRLNVTDHRPSLVHDFT 160
           NE  ++  DDVR  + + T   FLSWRLNV D R  LVHDFT
Sbjct: 179 NEYSYV--DDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]

BLAST of Moc10g07490 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 98.2 bits (243), Expect = 6.4e-21
Identity = 72/155 (46.45%), Postives = 85/155 (54.84%), Query Frame = 0


Query: 7   GGNANSAAVGASAGCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRA 66
           GGNA +++     G     L RRCA+CDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRA
Sbjct: 73  GGNAKTSSY--KKGGVAHSLPRRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRA 132

Query: 67  AATVNIT-------AAE-----------PNHHHHHHMFGGSYTNSTSWVPHQHSPATTQK 126
            A  N+T       AAE             + HHHH +  S   S SW  HQ+    TQ+
Sbjct: 133 TAR-NLTISGGGSSAAEVPVENSYNGGGNYYSHHHHHYASS---SPSWA-HQN----TQR 192

Query: 127 LPCLSPAGISNESMFIGNDDVRRSEPETGISFLSW 144
           +P  SP     E  ++ N         T  SF+SW
Sbjct: 193 VPYFSPVP-EMEYPYVDN--------VTASSFMSW 207

[Close]

BLAST of Moc10g07490 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-13
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 20  GCGDPLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRAAATVNITA 75
           G  +  + R C++C+TT TPLWR+GP+GPKSLCNACGIR +K  R A AT   TA
Sbjct: 191 GYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATA 245

[Close]

BLAST of Moc10g07490 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 28  RRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRAAA 69
           R C++C+TT TPLWR+GP+GPKSLCNACGIR +K  R A A
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMA 270

The following BLAST results are available for this feature:

BLAST of Moc10g07490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533953.1	2.9e-60	74.55	GATA transcription factor 19-like [Cucurbita pepo subsp. pepo]	[more]
KAG6600583.1	5.0e-60	74.55	GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022942846.1	5.0e-60	74.55	GATA transcription factor 19-like [Cucurbita moschata]	[more]
XP_022982306.1	1.6e-58	74.10	GATA transcription factor 19-like [Cucurbita maxima]	[more]
XP_004146553.2	2.5e-51	72.05	GATA transcription factor 18 isoform X1 [Cucumis sativus]	[more]

BLAST of Moc10g07490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC79	2.7e-32	52.30	GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2	[more]
Q6QPM2	7.3e-30	52.47	GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2	[more]
Q9ZPX0	8.9e-20	46.45	GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2	[more]
B8AX51	2.9e-18	73.02	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]
Q6L5E5	2.9e-18	73.02	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]

BLAST of Moc10g07490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQ08	2.4e-60	74.55	GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 ...	[more]
A0A6J1IYZ2	7.8e-59	74.10	GATA transcription factor 19-like OS=Cucurbita maxima OX=3661 GN=LOC111481178 PE...	[more]
A0A0A0KY15	1.2e-51	72.05	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 P...	[more]
A0A5D3CZ78	1.7e-50	72.15	GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BSF9	1.7e-50	72.15	GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 S...	[more]

BLAST of Moc10g07490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50870.1	1.9e-33	52.30	GATA type zinc finger transcription factor family protein	[more]
AT4G36620.1	5.2e-31	52.47	GATA transcription factor 19	[more]
AT2G18380.1	6.4e-21	46.45	GATA transcription factor 20	[more]
AT4G26150.1	1.7e-13	58.18	cytokinin-responsive gata factor 1	[more]
AT5G56860.1	1.2e-11	68.29	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 24..78 e-value: 3.1E-17 score: 73.3
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 30..64 e-value: 4.4E-18 score: 64.6
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 30..55
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 24..60 score: 13.955821
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 29..61 e-value: 7.70902E-14 score: 60.4642
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 26..85 e-value: 6.2E-17 score: 63.4
IPR044272	GATA transcription factor 18/19/20	PANTHER	PTHR46813	GATA TRANSCRIPTION FACTOR 18	coord: 10..157
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..21 score: 5.0
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 27..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g07490.1	Moc10g07490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0031969	chloroplast membrane
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding