Moc10g06580 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g06580
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Histone H3
Location	chr10: 4722006 .. 4723894 (-)
RNA-Seq Expression	Moc10g06580
Synteny	Moc10g06580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGTACCAAGCAAACTGCTCGTAAGTCTACTGGAGGGAAGGCTCCCAGGAAGCAACTGGCCACCAAGGTTTGCTCAATTTCCTTGTGCAATAACTTTAATGAATTTGATTGAGTTTGATTAATTGAATTAACTTTGCTGTTAATTTATGTTGTTGGTATTCTAGGCCGCCCGTAAGTCAGCCCCAACTACAGGAGGGGTGAAGAAGCCTCACAGATACCGCCCTGGTACTGTTGCTCTTCGGTGAGTTCGCATGGTCTTTTTCTTCTTGCCTTACCACCCTTGGAGGTGTGCTTATACTCCGTTGGATGCAGCAAACAAGTGATTCACTTCTTTCTTCCTTGTGAATTCGTGCAGTGAAATCCGTAAGTACCAGAAGAGTACTGAGCTCTTGATTAGGAAGTTGCCATTCCAGAGGTTGGTTCGTGAAATTGCCCAGGACTTCAAGGTATGTCCTTTATCTTCTGCTCGATGATCTGATTTAAGCTTTGTGCTCTGCTGGGTTCAATGTAGCATTAAGGTTTTTGCGTTAATTTTTTTGTGCAGACTGATCTGCGTTTCCAGAGCCACGCTGTTCTGGCTCTGCAAGAGGCAGCTGAGGCATACCTTGTTGGGTTGTTCGAGGACACCAATCTGTGCGCCATCCACGCCAAGCGTGTTACCATAATGCCTAAAGATATCCAGTTGGCTAGGAGAATCAGGGGTGAACGTGCTTAGAAGATGGCGCATTGTTTGGATGAGGGTGGTAATTGGCTGCAACATGGAGTGATCAAAGACCTAATTGATGATGGATGGATGGTTCTTATTTTTGTTTTTAGCAACGTTGGTAGATATAGCTATACTAGAAACCTGTAGTGAATATGGTAAAAGGCATAATGCTTTGCTTGTGCATGTTAATGATGTTTAGTTGTGGATGATTTTGTTTTGTTCTCTTTAAAAGGATGGAGGAGCTTAAATCTGTATTTCATTGAATTGTGTTTTTGGGGTATGCAGCCAGACTAATATTGTTGGATAACCTACCACATCTAATCTTTAGTTCAGATTTGTAAGTTCTGTTATTCATGAATTACTTGAATCTGTTCTTTGCATGAATTACTTGAATCTGTTCTTTGCATGAATTATTTGAATCTGTCCTGTTAAATCTTTGTCCAAGTTATTGTCAGGAAGGGTTGGATTTGAAATTTGAATCATTCACCCAATTAATTGTAACAATAATGAGTTGTATTTGTTGTAACCTTTTGGTTTGAACTCTGGCAAAGTTCGATGATTTATCTCGTCAAACTACTGAAGTGGTATATGTTTTTTTATTTTCAAAACTGATGAATTAGTGTGTTCTAAATTTCAACTTGTTCGGTTTATACCATTTTTATTTGGAAAATTCTCATCGTGAAACAGAAAAAGGGGTCCCCTTGTAGTTAAATTTTCTCAAGAATAAGTTTAGCTCTGTTAATTTATTTAACCAGAATGGGTCTTGATTCTCTGCAAAGGTGCTCTAGTTCTTCTGGAGTTGTGCTCTAATTCTTCAGGAGCTGTTAGATTCTTATTCTATTTGCAAGTTGAATATCTTCACGGTACATACTCTTGTCCCGTTAGTCCTCCAACTCCTTGTCACTGTAACCTTAGTTCCTCTTTCAATTGACGCTTTGTTGGGGCTTTGGCTATTCAAATTTGAGTCTATTTGATGATTAGTTCTTTGGTAATTAGGCTCAACAACTGATCTTTCACATCTTGTGGCCTGCTTATGTTTGAAGCATGAAAAGAAGATACCCACGATCTCTCGCTATGAGACGCCTATCATCAGTTGGTGTTATGTCTTTGGATTGCTTCCAAATCTTCCTACGTACAATTCTGTTTATGTTGCTAGCTTATCGAATCCTGATTCTTAG

mRNA sequence

ATGGCCCGTACCAAGCAAACTGCTCGTAAGTCTACTGGAGGGAAGGCTCCCAGGAAGCAACTGGCCACCAAGGCCGCCCGTAAGTCAGCCCCAACTACAGGAGGGGTGAAGAAGCCTCACAGATACCGCCCTGGTACTGTTGCTCTTCGTGAAATCCGTAAGTACCAGAAGAGTACTGAGCTCTTGATTAGGAAGTTGCCATTCCAGAGGTTGGTTCGTGAAATTGCCCAGGACTTCAAGACTGATCTGCGTTTCCAGAGCCACGCTGTTCTGGCTCTGCAAGAGGCAGCTGAGGCATACCTTGTTGGGTTGTTCGAGGACACCAATCTGTGCGCCATCCACGCCAAGCGTGTTACCATAATGCCTAAAGATATCCAGTTGGCTAGGAGAATCAGGGAATGGGTCTTGATTCTCTGCAAAGGTGCTCTAGTTCTTCTGGAGTTGTGCTCTAATTCTTCAGGAGCTGTTAGATTCTTATTCTATTTGCAAGTTGAATATCTTCACGGCTCAACAACTGATCTTTCACATCTTGTGGCCTGCTTATGTTTGAAGCATGAAAAGAAGATACCCACGATCTCTCGCTATGAGACGCCTATCATCAGTTGGTGTTATGTCTTTGGATTGCTTCCAAATCTTCCTACGTACAATTCTGTTTATGTTGCTAGCTTATCGAATCCTGATTCTTAG

Coding sequence (CDS)

ATGGCCCGTACCAAGCAAACTGCTCGTAAGTCTACTGGAGGGAAGGCTCCCAGGAAGCAACTGGCCACCAAGGCCGCCCGTAAGTCAGCCCCAACTACAGGAGGGGTGAAGAAGCCTCACAGATACCGCCCTGGTACTGTTGCTCTTCGTGAAATCCGTAAGTACCAGAAGAGTACTGAGCTCTTGATTAGGAAGTTGCCATTCCAGAGGTTGGTTCGTGAAATTGCCCAGGACTTCAAGACTGATCTGCGTTTCCAGAGCCACGCTGTTCTGGCTCTGCAAGAGGCAGCTGAGGCATACCTTGTTGGGTTGTTCGAGGACACCAATCTGTGCGCCATCCACGCCAAGCGTGTTACCATAATGCCTAAAGATATCCAGTTGGCTAGGAGAATCAGGGAATGGGTCTTGATTCTCTGCAAAGGTGCTCTAGTTCTTCTGGAGTTGTGCTCTAATTCTTCAGGAGCTGTTAGATTCTTATTCTATTTGCAAGTTGAATATCTTCACGGCTCAACAACTGATCTTTCACATCTTGTGGCCTGCTTATGTTTGAAGCATGAAAAGAAGATACCCACGATCTCTCGCTATGAGACGCCTATCATCAGTTGGTGTTATGTCTTTGGATTGCTTCCAAATCTTCCTACGTACAATTCTGTTTATGTTGCTAGCTTATCGAATCCTGATTCTTAG

Protein sequence

MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIREWVLILCKGALVLLELCSNSSGAVRFLFYLQVEYLHGSTTDLSHLVACLCLKHEKKIPTISRYETPIISWCYVFGLLPNLPTYNSVYVASLSNPDS

Homology

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BLAST of Moc10g06580 vs. NCBI nr
Match: KHG00494.1 (Histone H3.3 [Gossypium arboreum])

HSP 1 Score: 252.7 bits (644), Expect = 3.1e-63
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIREW 135
           MPKDIQLARRIR W
Sbjct: 121 MPKDIQLARRIRGW 134

[Close]

BLAST of Moc10g06580 vs. NCBI nr
Match: PPR83219.1 (hypothetical protein GOBAR_AA37497 [Gossypium barbadense])

HSP 1 Score: 252.7 bits (644), Expect = 3.1e-63
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIREW 135
           MPKDIQLARRIR W
Sbjct: 121 MPKDIQLARRIRGW 134

[Close]

BLAST of Moc10g06580 vs. NCBI nr
Match: RZC44769.1 (hypothetical protein C5167_037715 [Papaver somniferum])

HSP 1 Score: 251.1 bits (640), Expect = 8.9e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRE 134
           MPKDIQLARRIRE
Sbjct: 121 MPKDIQLARRIRE 133

[Close]

BLAST of Moc10g06580 vs. NCBI nr
Match: KAG8097451.1 (hypothetical protein GUJ93_ZPchr0013g35923 [Zizania palustris])

HSP 1 Score: 251.1 bits (640), Expect = 8.9e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRE 134
           MPKDIQLARRIRE
Sbjct: 121 MPKDIQLARRIRE 133

[Close]

BLAST of Moc10g06580 vs. NCBI nr
Match: KAG6600643.1 (hypothetical protein SDJN03_05876, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.1 bits (640), Expect = 8.9e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 564 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 623

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 624 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 683

Query: 121 MPKDIQLARRIRE 134
           MPKDIQLARRIRE
Sbjct: 684 MPKDIQLARRIRE 696

[Close]

BLAST of Moc10g06580 vs. ExPASy Swiss-Prot
Match: P59169 (Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 5.8e-65
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

[Close]

BLAST of Moc10g06580 vs. ExPASy Swiss-Prot
Match: Q6RUR1 (Histone H3.3 OS=Capsicum annuum OX=4072 PE=2 SV=3)

HSP 1 Score: 248.8 bits (634), Expect = 5.8e-65
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

[Close]

BLAST of Moc10g06580 vs. ExPASy Swiss-Prot
Match: Q71V89 (Histone H3.3 OS=Gossypium hirsutum OX=3635 GN=HIS3 PE=2 SV=3)

HSP 1 Score: 248.8 bits (634), Expect = 5.8e-65
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

[Close]

BLAST of Moc10g06580 vs. ExPASy Swiss-Prot
Match: Q3C2E5 (Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3)

HSP 1 Score: 248.8 bits (634), Expect = 5.8e-65
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

[Close]

BLAST of Moc10g06580 vs. ExPASy Swiss-Prot
Match: P69245 (Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 5.8e-65
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

[Close]

BLAST of Moc10g06580 vs. ExPASy TrEMBL
Match: A0A0B0MLX3 (Histone H3.3 OS=Gossypium arboreum OX=29729 GN=F383_18206 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-63
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIREW 135
           MPKDIQLARRIR W
Sbjct: 121 MPKDIQLARRIRGW 134

[Close]

BLAST of Moc10g06580 vs. ExPASy TrEMBL
Match: A0A2P5VWN4 (Histone domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA37497 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-63
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIREW 135
           MPKDIQLARRIR W
Sbjct: 121 MPKDIQLARRIRGW 134

[Close]

BLAST of Moc10g06580 vs. ExPASy TrEMBL
Match: A0A4Y7IBI5 (Histone domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_037715 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 4.3e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRE 134
           MPKDIQLARRIRE
Sbjct: 121 MPKDIQLARRIRE 133

[Close]

BLAST of Moc10g06580 vs. ExPASy TrEMBL
Match: A0A445HHT0 (Histone H3.2 (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_037083 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.6e-63
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 136 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 195

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 196 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 255

Query: 121 MPKDIQLARRIREWVL 137
           MPKDIQLARRIR+ V+
Sbjct: 256 MPKDIQLARRIRDGVV 271

[Close]

BLAST of Moc10g06580 vs. ExPASy TrEMBL
Match: A0A0V0H4H2 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 7.4e-63
Identity = 143/172 (83.14%), Postives = 147/172 (85.47%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRI---REWVLILCKGALVLLELCSNSSGAVRFLFYLQVEYLHG 170
           MPKDIQLARRI   R    +LC+     L+  S    +V FL  L   YL G
Sbjct: 121 MPKDIQLARRIRGERAXNALLCR----CLDCXSLFCNSVFFLCSLGYSYLIG 168

[Close]

BLAST of Moc10g06580 vs. TAIR 10
Match: AT4G40030.1 (Histone superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.1e-66
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

[Close]

BLAST of Moc10g06580 vs. TAIR 10
Match: AT4G40040.1 (Histone superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.1e-66
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

[Close]

BLAST of Moc10g06580 vs. TAIR 10
Match: AT4G40040.2 (Histone superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.1e-66
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

[Close]

BLAST of Moc10g06580 vs. TAIR 10
Match: AT4G40030.2 (Histone superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.1e-66
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 29  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 88

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 89  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 148

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 149 MPKDIQLARRIR 160

[Close]

BLAST of Moc10g06580 vs. TAIR 10
Match: AT4G40030.3 (Histone superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.1e-66
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIR 133
           MPKDIQLARRIR
Sbjct: 121 MPKDIQLARRIR 132

The following BLAST results are available for this feature:

BLAST of Moc10g06580 vs. NCBI nr


Match Name	E-value	Identity	Description
KHG00494.1	3.1e-63	99.25	Histone H3.3 [Gossypium arboreum]	[more]
PPR83219.1	3.1e-63	99.25	hypothetical protein GOBAR_AA37497 [Gossypium barbadense]	[more]
RZC44769.1	8.9e-63	100.00	hypothetical protein C5167_037715 [Papaver somniferum]	[more]
KAG8097451.1	8.9e-63	100.00	hypothetical protein GUJ93_ZPchr0013g35923 [Zizania palustris]	[more]
KAG6600643.1	8.9e-63	100.00	hypothetical protein SDJN03_05876, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc10g06580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59169	5.8e-65	100.00	Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2	[more]
Q6RUR1	5.8e-65	100.00	Histone H3.3 OS=Capsicum annuum OX=4072 PE=2 SV=3	[more]
Q71V89	5.8e-65	100.00	Histone H3.3 OS=Gossypium hirsutum OX=3635 GN=HIS3 PE=2 SV=3	[more]
Q3C2E5	5.8e-65	100.00	Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3	[more]
P69245	5.8e-65	100.00	Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2	[more]

BLAST of Moc10g06580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0B0MLX3	1.5e-63	99.25	Histone H3.3 OS=Gossypium arboreum OX=29729 GN=F383_18206 PE=3 SV=1	[more]
A0A2P5VWN4	1.5e-63	99.25	Histone domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA374...	[more]
A0A4Y7IBI5	4.3e-63	100.00	Histone domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_037715 ...	[more]
A0A445HHT0	5.6e-63	97.79	Histone H3.2 (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_037083 PE=3 SV=1	[more]
A0A0V0H4H2	7.4e-63	83.14	Putative ovule protein OS=Solanum chacoense OX=4108 PE=3 SV=1	[more]

BLAST of Moc10g06580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G40030.1	4.1e-66	100.00	Histone superfamily protein	[more]
AT4G40040.1	4.1e-66	100.00	Histone superfamily protein	[more]
AT4G40040.2	4.1e-66	100.00	Histone superfamily protein	[more]
AT4G40030.2	4.1e-66	100.00	Histone superfamily protein	[more]
AT4G40030.3	4.1e-66	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 3..17 score: 97.1 coord: 98..114 score: 96.93 coord: 58..75 score: 97.46 coord: 114..135 score: 81.23 coord: 80..98 score: 82.38 coord: 17..31 score: 92.32 coord: 34..55 score: 91.8
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 34..136 e-value: 4.1E-71 score: 252.2
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 1..132
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 15..21
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 67..75
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 1..132 e-value: 5.0E-53 score: 178.9
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..134 e-value: 4.0E-74 score: 248.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 2..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR11426:SF198	SUBFAMILY NOT NAMED	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g06580.1	Moc10g06580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003677	DNA binding