Moc10g05470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g05470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	PMD domain-containing protein
Location	chr10: 3854007 .. 3855223 (+)
RNA-Seq Expression	Moc10g05470
Synteny	Moc10g05470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGAGATTGGGAGTGAAAGATCAAAGTCATGGAACATTTACACAACTCCAGACCAGAGCCCATCAGCTCAAACAGACTTTGGTCAGGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTATCATGGCCATCTTTGAGCATCTGTTCAGACCAACTTCTCCTCTCTCCTCCTCCTCTGATGAAGTCACCAACAACTCTGCTGGCTCGGGTCCGGCCGAAAAATTCGCTTGTCCGAATATGGTACGTTTCGACCCCAAGTGGTTAGTTTCTTAGATTGTCATCCCCCTTTGTTTAATATCATTACAACTTTGCAGAACTTCCCCTTCCCTTAAAATAAGTGTTTCAGTTTAGGATGCTTTAAACTACTTAACTCTTCATATGTTCTTCCTGGTCCCAAATCTCTTAATAAGGAGCTCTAAAATAAATTTTCTTTGTGAACAAACATGGTTGTCCAGTTTATATGTAACTGGATTAAATTAGAGTCGAGAAACTCATAGGATATTTAATATTCTAGGTCGGTAACCACCAAATAATTTTACCCATGGCCTCAAATTCAATACTTTTTTTAATATTAGGACTTTGCAAACTTATGGGGAAAAGAAGATAATTTTTCTGATGTGGAAATGAGGTGGCACTCGTTTCTCACCCTAGGTTAATTGAACTCGTCTTTTGAGAGACGAGTGTCACATGTGGCTTCATAAACTTATCTCACGACGAAACTACCAATATCTAAACAACCATAGTCTCCTAACTAGTTTCATCTCTACAGTTCAACATTCGAGTGGATTCAAAGAAAATTAAGAAAAGAAAAAGGAAAAAAGAACTATTTTCTCTTGTCTTCTTCAACAACATTATCTTTGATCACAACAGTGGCAAGACACACAACATCAACACTAGCCTGCACCAATCATTACACAATACATGCTTTTCTTTCAAGGTCGAGTCACTGAATTCCACCTTGGAAATCATATGTTTTTGTTTATTAAGTGTGTCTTTTTGTTTGGTGCCAGGTGTCAAGATCATATGCATCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACTTTCATTGCCCAGCCAGCTCCTCTGCCAGTGCCATGCCAAAGAGAGGGGATCTATTGGCCTTCTCATGACCATAATTTTTCAGGTCCTTAA

mRNA sequence

ATGAGTGAGATTGGGAGTGAAAGATCAAAGTCATGGAACATTTACACAACTCCAGACCAGAGCCCATCAGCTCAAACAGACTTTGGTCAGGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTATCATGGCCATCTTTGAGCATCTGTTCAGACCAACTTCTCCTCTCTCCTCCTCCTCTGATGAAGTCACCAACAACTCTGCTGGCTCGGGTCCGGCCGAAAAATTCGCTTGTCCGAATATGGTGTCAAGATCATATGCATCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACTTTCATTGCCCAGCCAGCTCCTCTGCCAGTGCCATGCCAAAGAGAGGGGATCTATTGGCCTTCTCATGACCATAATTTTTCAGGTCCTTAA

Coding sequence (CDS)

ATGAGTGAGATTGGGAGTGAAAGATCAAAGTCATGGAACATTTACACAACTCCAGACCAGAGCCCATCAGCTCAAACAGACTTTGGTCAGGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTATCATGGCCATCTTTGAGCATCTGTTCAGACCAACTTCTCCTCTCTCCTCCTCCTCTGATGAAGTCACCAACAACTCTGCTGGCTCGGGTCCGGCCGAAAAATTCGCTTGTCCGAATATGGTGTCAAGATCATATGCATCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACTTTCATTGCCCAGCCAGCTCCTCTGCCAGTGCCATGCCAAAGAGAGGGGATCTATTGGCCTTCTCATGACCATAATTTTTCAGGTCCTTAA

Protein sequence

MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTFIAQPAPLPVPCQREGIYWPSHDHNFSGP

Homology

[Close]

BLAST of Moc10g05470 vs. NCBI nr
Match: XP_022136447.1 (uncharacterized protein LOC111008157 isoform X1 [Momordica charantia] >XP_022136448.1 uncharacterized protein LOC111008157 isoform X1 [Momordica charantia] >XP_022136449.1 uncharacterized protein LOC111008157 isoform X1 [Momordica charantia] >XP_022136450.1 uncharacterized protein LOC111008157 isoform X1 [Momordica charantia])

HSP 1 Score: 303.5 bits (776), Expect = 9.8e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPLPVPCQREGIYWPSHDHNFSGP
Sbjct: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 148

[Close]

BLAST of Moc10g05470 vs. NCBI nr
Match: XP_004133716.1 (uncharacterized protein LOC101206733 isoform X1 [Cucumis sativus] >KGN56252.1 hypothetical protein Csa_010216 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65
Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPS+QT  GQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRP+SP  SSSDEVTNNS+ S PAEKFA PN VS SYASDFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPSSPF-SSSDEVTNNSSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPL  PCQREGIYWPSH HNFSGP
Sbjct: 121 IAQPAPL--PCQREGIYWPSHRHNFSGP 145

[Close]

BLAST of Moc10g05470 vs. NCBI nr
Match: XP_038906346.1 (uncharacterized protein LOC120092185 isoform X1 [Benincasa hispida] >XP_038906347.1 uncharacterized protein LOC120092185 isoform X1 [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 6.2e-65
Identity = 131/148 (88.51%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIG ERSKSWNIYTTPDQSPS+QT  GQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGYERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRPTSP  SSSDEVTNNS+ SG AEKF+ PN VS SYASDFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPTSPF-SSSDEVTNNSSESGLAEKFSSPNTVSTSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPL  PCQREGIYWPSH HNFSGP
Sbjct: 121 IAQPAPL--PCQREGIYWPSHHHNFSGP 145

[Close]

BLAST of Moc10g05470 vs. NCBI nr
Match: XP_008452251.2 (PREDICTED: uncharacterized protein LOC103493322 [Cucumis melo] >XP_016901214.1 PREDICTED: uncharacterized protein LOC103493322 [Cucumis melo] >KAA0060603.1 uncharacterized protein E6C27_scaffold22G004810 [Cucumis melo var. makuwa] >TYK02268.1 uncharacterized protein E5676_scaffold18G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64
Identity = 132/148 (89.19%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPS+QT  GQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRP+SP  SSSDEVTNNS  S PAEKFA PN VS SYASDFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPSSPF-SSSDEVTNNSE-STPAEKFASPNTVSTSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPL  PCQREGIYWPSH HNFSGP
Sbjct: 121 IAQPAPL--PCQREGIYWPSHHHNFSGP 144

[Close]

BLAST of Moc10g05470 vs. NCBI nr
Match: XP_022983836.1 (uncharacterized protein LOC111482330 [Cucurbita maxima] >XP_022983844.1 uncharacterized protein LOC111482330 [Cucurbita maxima] >XP_022983852.1 uncharacterized protein LOC111482330 [Cucurbita maxima] >KAG7031361.1 hypothetical protein SDJN02_05401 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254.6 bits (649), Expect = 5.2e-64
Identity = 130/148 (87.84%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPS+QT  GQEAPWKNFGSSMNAISFGFVATAILISMFLI
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRPTS  SSS  EVTNN A SGP EKFA PN V  SYA+DFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPTSSFSSSG-EVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPL  PCQREG YWPSHDHNFSGP
Sbjct: 121 IAQPAPL--PCQREGTYWPSHDHNFSGP 145

[Close]

BLAST of Moc10g05470 vs. ExPASy TrEMBL
Match: A0A6J1C5I8 (uncharacterized protein LOC111008157 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008157 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.8e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPLPVPCQREGIYWPSHDHNFSGP
Sbjct: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 148

[Close]

BLAST of Moc10g05470 vs. ExPASy TrEMBL
Match: A0A0A0L6N7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110010 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.0e-66
Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPS+QT  GQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRP+SP  SSSDEVTNNS+ S PAEKFA PN VS SYASDFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPSSPF-SSSDEVTNNSSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPL  PCQREGIYWPSH HNFSGP
Sbjct: 121 IAQPAPL--PCQREGIYWPSHRHNFSGP 145

[Close]

BLAST of Moc10g05470 vs. ExPASy TrEMBL
Match: A0A1S4DZ08 (uncharacterized protein LOC103493322 OS=Cucumis melo OX=3656 GN=LOC103493322 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 132/148 (89.19%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPS+QT  GQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRP+SP  SSSDEVTNNS  S PAEKFA PN VS SYASDFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPSSPF-SSSDEVTNNSE-STPAEKFASPNTVSTSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPL  PCQREGIYWPSH HNFSGP
Sbjct: 121 IAQPAPL--PCQREGIYWPSHHHNFSGP 144

[Close]

BLAST of Moc10g05470 vs. ExPASy TrEMBL
Match: A0A5D3BTG7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00690 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 132/148 (89.19%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPS+QT  GQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRP+SP  SSSDEVTNNS  S PAEKFA PN VS SYASDFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPSSPF-SSSDEVTNNSE-STPAEKFASPNTVSTSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPL  PCQREGIYWPSH HNFSGP
Sbjct: 121 IAQPAPL--PCQREGIYWPSHHHNFSGP 144

[Close]

BLAST of Moc10g05470 vs. ExPASy TrEMBL
Match: A0A6J1J0H1 (uncharacterized protein LOC111482330 OS=Cucurbita maxima OX=3661 GN=LOC111482330 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.5e-64
Identity = 130/148 (87.84%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPS+QT  GQEAPWKNFGSSMNAISFGFVATAILISMFLI
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTF 120
           MAIFEHLFRPTS  SSS  EVTNN A SGP EKFA PN V  SYA+DFSVLMPGQHIPTF
Sbjct: 61  MAIFEHLFRPTSSFSSSG-EVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPVPCQREGIYWPSHDHNFSGP 149
           IAQPAPL  PCQREG YWPSHDHNFSGP
Sbjct: 121 IAQPAPL--PCQREGTYWPSHDHNFSGP 145

[Close]

BLAST of Moc10g05470 vs. TAIR 10
Match: AT1G09812.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58007.2); Has 93 Blast hits to 93 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 6.7e-25
Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 8   RSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHL 67
           +S SW+IY +P +  S       E PW++  +SMNAISFGFVATAILISMFLIMAIFEHL
Sbjct: 3   KSSSWSIY-SPREGDS-------EGPWRS-STSMNAISFGFVATAILISMFLIMAIFEHL 62

Query: 68  FRPTSPLSSSSDEVTNNSA-GSGPAEKFA-CPNMVSRSYASDFSVLMPGQHIPTFIAQPA 127
           FRP +    S  ++      GS   +K A   +MV  S   D SV+MPG+ +P+ IA PA
Sbjct: 63  FRPENSSFDSPHQIRQRQRDGSSQFQKLADQASMVPVSTVVDVSVVMPGEKLPSHIALPA 122

Query: 128 PLPVPCQREGIYWP 140
           PL  PC+REGI+WP
Sbjct: 123 PL--PCRREGIHWP 125

[Close]

BLAST of Moc10g05470 vs. TAIR 10
Match: AT1G58007.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 91 Blast hits to 91 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 9.0e-22
Identity = 66/136 (48.53%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 6   SERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFE 65
           S   ++W+IY T D S                GSSMNAISFGFVATAILI MF+IMAI E
Sbjct: 4   SRSIRTWSIYRTKDTS----------------GSSMNAISFGFVATAILILMFIIMAILE 63

Query: 66  HLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTFIAQPA 125
           HLFR      SSS +V ++S     AEK +   + +    SD SV+MPG  +P+++A PA
Sbjct: 64  HLFRSD---HSSSYDVDDSSQFQKLAEKASMVPVTT----SDVSVVMPGDKLPSYVALPA 114

Query: 126 PLPVPCQREGIYWPSH 142
           P   PC+REGI WPSH
Sbjct: 124 PF--PCRREGIRWPSH 114

[Close]

BLAST of Moc10g05470 vs. TAIR 10
Match: AT1G58007.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 9.0e-22
Identity = 66/136 (48.53%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 6   SERSKSWNIYTTPDQSPSAQTDFGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFE 65
           S   ++W+IY T D S                GSSMNAISFGFVATAILI MF+IMAI E
Sbjct: 4   SRSIRTWSIYRTKDTS----------------GSSMNAISFGFVATAILILMFIIMAILE 63

Query: 66  HLFRPTSPLSSSSDEVTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTFIAQPA 125
           HLFR      SSS +V ++S     AEK +   + +    SD SV+MPG  +P+++A PA
Sbjct: 64  HLFRSD---HSSSYDVDDSSQFQKLAEKASMVPVTT----SDVSVVMPGDKLPSYVALPA 114

Query: 126 PLPVPCQREGIYWPSH 142
           P   PC+REGI WPSH
Sbjct: 124 PF--PCRREGIRWPSH 114

[Close]

BLAST of Moc10g05470 vs. TAIR 10
Match: AT1G11120.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20
Identity = 60/132 (45.45%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 24  AQTDFGQEAPWKN-FGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSPLSSSSDE-- 83
           A  +  +E PWK+ F  S+NA+SFGFVATAILISMFL+MAIFE L R T+  +++SD   
Sbjct: 20  APMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTTNSDSSS 79

Query: 84  ------VTNNSAGSGPAEKFACPNMVSRSYASDFSVLMPGQHIPTFIAQPAPLPVPCQRE 143
                 + +    +G A K    +     Y++  SVLMPG  IPTFIA PA  PVPC  +
Sbjct: 80  SRVLPGMDSRVGFNGAATKLGYQSPKMTVYSNGVSVLMPGDDIPTFIAHPA--PVPCPPQ 139

Query: 144 GIYWPSHDHNFS 147
            I    H H  S
Sbjct: 140 NISQSQHQHGSS 149

[Close]

BLAST of Moc10g05470 vs. TAIR 10
Match: AT1G11120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 5.1e-17
Identity = 63/158 (39.87%), Postives = 80/158 (50.63%), Query Frame = 0


Query: 24  AQTDFGQEAPWKN-FGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSPLSSSSDE-- 83
           A  +  +E PWK+ F  S+NA+SFGFVATAILISMFL+MAIFE L R T+  +++SD   
Sbjct: 20  APMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTTNSDSSS 79

Query: 84  ------VTNNSAGSGPAEKF------ACPNMVSRS--------------------YASDF 143
                 + +    +G A K       A  N +  S                    Y++  
Sbjct: 80  SRVLPGMDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILRMTVYSNGV 139

Query: 144 SVLMPGQHIPTFIAQPAPLPVPCQREGIYWPSHDHNFS 147
           SVLMPG  IPTFIA PA  PVPC  + I    H H  S
Sbjct: 140 SVLMPGDDIPTFIAHPA--PVPCPPQNISQSQHQHGSS 175

The following BLAST results are available for this feature:

BLAST of Moc10g05470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136447.1	9.8e-79	100.00	uncharacterized protein LOC111008157 isoform X1 [Momordica charantia] >XP_022136...	[more]
XP_004133716.1	1.2e-65	89.19	uncharacterized protein LOC101206733 isoform X1 [Cucumis sativus] >KGN56252.1 hy...	[more]
XP_038906346.1	6.2e-65	88.51	uncharacterized protein LOC120092185 isoform X1 [Benincasa hispida] >XP_03890634...	[more]
XP_008452251.2	2.3e-64	89.19	PREDICTED: uncharacterized protein LOC103493322 [Cucumis melo] >XP_016901214.1 P...	[more]
XP_022983836.1	5.2e-64	87.84	uncharacterized protein LOC111482330 [Cucurbita maxima] >XP_022983844.1 uncharac...	[more]

BLAST of Moc10g05470 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc10g05470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5I8	4.8e-79	100.00	uncharacterized protein LOC111008157 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0L6N7	6.0e-66	89.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110010 PE=4 SV=1	[more]
A0A1S4DZ08	1.1e-64	89.19	uncharacterized protein LOC103493322 OS=Cucumis melo OX=3656 GN=LOC103493322 PE=...	[more]
A0A5D3BTG7	1.1e-64	89.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1J0H1	2.5e-64	87.84	uncharacterized protein LOC111482330 OS=Cucurbita maxima OX=3661 GN=LOC111482330...	[more]

BLAST of Moc10g05470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09812.1	6.7e-25	52.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G58007.1	9.0e-22	48.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G58007.2	9.0e-22	48.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G11120.2	1.7e-20	45.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G11120.1	5.1e-17	39.87	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR33728:SF3	MULTIDRUG RESISTANCE PROTEIN	coord: 1..146
None	No IPR available	PANTHER	PTHR33728	CTTNBP 2 AMINO-TERMINAL-LIKE PROTEIN	coord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g05470.1	Moc10g05470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane