Moc10g05010 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g05010
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionE3 ubiquitin-protein ligase
Locationchr10: 3489572 .. 3490787 (+)
RNA-Seq ExpressionMoc10g05010
SyntenyMoc10g05010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAGAACCTTCGACCTCGGATCGCCATCAATGGCGGCGTCCACAGGACGACAACTCTTCATTATTACTGGTGTCGAATCTGTCGACGAATTATCAGGATCAGCTTCGGAAATCCCCTCGAAATTTCGATTTCTTGCCCCTTCTGCTCCAGGCTTCTCCGCCACGAACTCGACGTAGCTAGGGCTCGATTCCACGCCGATCCTTCTGGTTTTCTCCCAAATTCCTCTCGCCTCCCCGATCCACGTCCCGATTCTCGCCGGAATTTACCTCTCTGGGGTTTTGAAATCGACGACGGCCCTTCTCCAGAGTCGTGGATTACTCTCCAATTCTCCCGACCCCGAGCCCTCCCCGAAAGTTCCGATGCGCCTCCCGATTCGAGGCAGGATTGCGGAATCGAAGCGATTCCGAGGGTGAAAATTACAGAGTACCATTTGGGGAAGGATTCGATTTGTCCAATTTGTAAAGAGGAATTTAGAATCGGAGGAGAAGCGAGAGAATTACCTTGCAAGCACTTTTACCATTCGGATTGTATTGTTCCGTGGTTGAGGCTCCGCAATACTTGCCCTGTTTGCCGCCATACGCTGCAGAACATCCCCGTCGCCGTCGCCGTCGCCGCCGCCGGGACTTTTGTCGAAGAAGGAGGCGGAAGGTGGAATGGATGGTGGAGCTCAATCTGTTCGTGGTGGCCGTTCCGTTCAATTGGTGGCTGGGCTCGCCGACTCCGGTATGCTGATTCCGGGGATAGCTTCTTCGTCATTGAACGTAAGATTTTGAATTCTGTATTTATTTCTTTCCATTTTTGTTTAAAGGAAAATTTCCCGATGCAGTTTTTTCTTTCCTTTATTTATTTACGAAAAACAAAACTTCCTCTTTATACTTTTTTTCTAAAAAAAGAATAAAAAGAATCCAATTTTTAACTTAAAACTTCCAATGAAATTAATCATTAATGAATATATTTATTCTAAATAAATTAATTAAAATAACACAATAAATGTGGTAAGAGGATCATAAATGAGAATAATCTGATAAAAAAAAACCTTCAAATTTAAAAATCTAAAAGGGAAAATAATCCTAATAATAGACAATCATAAGATATTGGTTGTGTCCTCTAAGGAGAATTTCTATTAATTTAATTTAATTTAATTAAAAAATTTATGTGGTGGGGGAGGGACTGCAGCAGATTCATGGATGTACTCTTGGCTGGCTAATTGA

mRNA sequence

ATGTCTCAGAACCTTCGACCTCGGATCGCCATCAATGGCGGCGTCCACAGGACGACAACTCTTCATTATTACTGGTGTCGAATCTGTCGACGAATTATCAGGATCAGCTTCGGAAATCCCCTCGAAATTTCGATTTCTTGCCCCTTCTGCTCCAGGCTTCTCCGCCACGAACTCGACGTAGCTAGGGCTCGATTCCACGCCGATCCTTCTGGTTTTCTCCCAAATTCCTCTCGCCTCCCCGATCCACGTCCCGATTCTCGCCGGAATTTACCTCTCTGGGGTTTTGAAATCGACGACGGCCCTTCTCCAGAGTCGTGGATTACTCTCCAATTCTCCCGACCCCGAGCCCTCCCCGAAAGTTCCGATGCGCCTCCCGATTCGAGGCAGGATTGCGGAATCGAAGCGATTCCGAGGGTGAAAATTACAGAGTACCATTTGGGGAAGGATTCGATTTGTCCAATTTGTAAAGAGGAATTTAGAATCGGAGGAGAAGCGAGAGAATTACCTTGCAAGCACTTTTACCATTCGGATTGTATTGTTCCGTGGTTGAGGCTCCGCAATACTTGCCCTGTTTGCCGCCATACGCTGCAGAACATCCCCGTCGCCGTCGCCGTCGCCGCCGCCGGGACTTTTGTCGAAGAAGGAGGCGGAAGGTGGAATGGATGGTGGAGCTCAATCTGTTCGTGGTGGCCGTTCCGTTCAATTGGTGGCTGGGCTCGCCGACTCCGGTATGCTGATTCCGGGGATAGCTTCTTCGTCATTGAACCAGATTCATGGATGTACTCTTGGCTGGCTAATTGA

Coding sequence (CDS)

ATGTCTCAGAACCTTCGACCTCGGATCGCCATCAATGGCGGCGTCCACAGGACGACAACTCTTCATTATTACTGGTGTCGAATCTGTCGACGAATTATCAGGATCAGCTTCGGAAATCCCCTCGAAATTTCGATTTCTTGCCCCTTCTGCTCCAGGCTTCTCCGCCACGAACTCGACGTAGCTAGGGCTCGATTCCACGCCGATCCTTCTGGTTTTCTCCCAAATTCCTCTCGCCTCCCCGATCCACGTCCCGATTCTCGCCGGAATTTACCTCTCTGGGGTTTTGAAATCGACGACGGCCCTTCTCCAGAGTCGTGGATTACTCTCCAATTCTCCCGACCCCGAGCCCTCCCCGAAAGTTCCGATGCGCCTCCCGATTCGAGGCAGGATTGCGGAATCGAAGCGATTCCGAGGGTGAAAATTACAGAGTACCATTTGGGGAAGGATTCGATTTGTCCAATTTGTAAAGAGGAATTTAGAATCGGAGGAGAAGCGAGAGAATTACCTTGCAAGCACTTTTACCATTCGGATTGTATTGTTCCGTGGTTGAGGCTCCGCAATACTTGCCCTGTTTGCCGCCATACGCTGCAGAACATCCCCGTCGCCGTCGCCGTCGCCGCCGCCGGGACTTTTGTCGAAGAAGGAGGCGGAAGGTGGAATGGATGGTGGAGCTCAATCTGTTCGTGGTGGCCGTTCCGTTCAATTGGTGGCTGGGCTCGCCGACTCCGGTATGCTGATTCCGGGGATAGCTTCTTCGTCATTGAACCAGATTCATGGATGTACTCTTGGCTGGCTAATTGA

Protein sequence

MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDVARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPESSDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIVPWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWARRLRYADSGDSFFVIEPDSWMYSWLAN
Homology
BLAST of Moc10g05010 vs. NCBI nr
Match: XP_022149238.1 (E3 ubiquitin-protein ligase RDUF2-like isoform X2 [Momordica charantia])

HSP 1 Score: 587.4 bits (1513), Expect = 6.1e-164
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV
Sbjct: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
           ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES
Sbjct: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV
Sbjct: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR
Sbjct: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240

Query: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 267
           RLRYADSGDSFFVIEPDSWMYSWLAN
Sbjct: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 266

BLAST of Moc10g05010 vs. NCBI nr
Match: XP_022149239.1 (probable E3 ubiquitin-protein ligase RHC1A isoform X3 [Momordica charantia])

HSP 1 Score: 577.4 bits (1487), Expect = 6.3e-161
Identity = 264/266 (99.25%), Postives = 264/266 (99.25%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV
Sbjct: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
           ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES
Sbjct: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV
Sbjct: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR
Sbjct: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240

Query: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 267
           RLRYADSGDSFFVIE  SWMYSWLAN
Sbjct: 241 RLRYADSGDSFFVIE-HSWMYSWLAN 265

BLAST of Moc10g05010 vs. NCBI nr
Match: XP_022149237.1 (E3 ubiquitin-protein ligase RDUF2-like isoform X1 [Momordica charantia])

HSP 1 Score: 560.5 bits (1443), Expect = 8.0e-156
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV
Sbjct: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
           ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES
Sbjct: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV
Sbjct: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR
Sbjct: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240

Query: 241 RLRYADSGDSFFVIE 256
           RLRYADSGDSFFVIE
Sbjct: 241 RLRYADSGDSFFVIE 255

BLAST of Moc10g05010 vs. NCBI nr
Match: XP_022942766.1 (uncharacterized protein LOC111447704 isoform X2 [Cucurbita moschata] >XP_022942767.1 uncharacterized protein LOC111447704 isoform X2 [Cucurbita moschata])

HSP 1 Score: 368.6 bits (945), Expect = 4.5e-98
Identity = 176/266 (66.17%), Postives = 199/266 (74.81%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQN RPRIA N G+ RT T+HYYWCRICRRIIRIS GNPLEISI+CPFCSR LRHELDV
Sbjct: 1   MSQNFRPRIAFNAGIPRTRTVHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
            RARFH DPS FL +S        +SRR +P W FE DD  S +SWITLQFSRP     S
Sbjct: 61  VRARFHGDPSNFLQDSGN-HMTNTNSRRMIPRWTFETDDPHSLDSWITLQFSRP-----S 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
            ++ P +  D  +EAI RVKITE HL KDS C ICKEEF IGGE RELPC+HFYHSDCIV
Sbjct: 121 ENSNPAANSD--MEAIRRVKITESHLQKDSSCAICKEEFEIGGEVRELPCRHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLR+ NTCP+CR+TLQN   A+   ++   VEEG GR NGWW+ + SWWPFR IG  AR
Sbjct: 181 PWLRIHNTCPICRYTLQN---AIDGESSEESVEEGDGRGNGWWNVVRSWWPFRVIGDLAR 240

Query: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 267
           RL +AD GD+   +EPDSWMYSWLAN
Sbjct: 241 RLGFADYGDNLLALEPDSWMYSWLAN 255

BLAST of Moc10g05010 vs. NCBI nr
Match: XP_022982371.1 (uncharacterized protein LOC111481213 isoform X2 [Cucurbita maxima])

HSP 1 Score: 363.6 bits (932), Expect = 1.4e-96
Identity = 175/266 (65.79%), Postives = 198/266 (74.44%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQN RPRIA N G+ RT T+HYYWCRICRRIIRIS GNPLEISI+CPFCSR LRHELDV
Sbjct: 1   MSQNFRPRIAFNAGIPRTRTVHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
            RARFH DPS FL +S        +SRR +P W FE DD  S +SWITLQFSRP    E+
Sbjct: 61  VRARFHGDPSNFLQDSGN-HMTNTNSRRMIPRWTFETDDAHSLDSWITLQFSRP---SEN 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           S+ P +S      EAI RVKITE HL KDS C ICKEEF IGGE +ELPC+HFYHSDCIV
Sbjct: 121 SNPPANS----DTEAIRRVKITESHLQKDSSCAICKEEFEIGGEVKELPCRHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLR+ NTCPVCR+TLQN   A+   +    VEEG GR NGWW+ + SWWPFR IG  AR
Sbjct: 181 PWLRIHNTCPVCRYTLQN---AIDGESFEESVEEGDGRENGWWNVVRSWWPFRVIGDLAR 240

Query: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 267
           RL +AD+GD+   +E DSWMYSWLA+
Sbjct: 241 RLGFADNGDNLLALETDSWMYSWLAD 255

BLAST of Moc10g05010 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.8e-21
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = 0

Query: 124 PPDSRQDCGIEAIPRVKITEYHL-GKDSICPICKEEFRIGGEARELPCKHFYHSDCIVPW 183
           PP  R    I+A+P +KI + HL   DS CP+CK+EF +G EA+++PC H YHSDCIVPW
Sbjct: 163 PPAPRS--AIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 222

Query: 184 LRLRNTCPVCRHTL---------QNIPVAVAVAAAGTFVEEGGGRWNG--WWSSICSWWP 237
           L   N+CPVCR  L         QN         + +       R NG    +   S+WP
Sbjct: 223 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 282

BLAST of Moc10g05010 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.1e-20
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           S  PP S+    IE++PRV+I++ H+G ++ C +C E F    EARE+PCKH +H DCIV
Sbjct: 170 SGNPPASKS--AIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIV 229

Query: 181 PWLRLRNTCPVCRHTLQNIP 201
           PWL +RN+CPVCR  L + P
Sbjct: 230 PWLSIRNSCPVCRFELPSEP 247

BLAST of Moc10g05010 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0

Query: 125 PDSRQDCGIEAIPRVKITEYHL-GKDSICPICKEEFRIGGEARELPCKHFYHSDCIVPWL 184
           P       I+A+P +KIT+ HL   DS CP+CK+EF +  EA+++PC H YHSDCIVPWL
Sbjct: 158 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 217

Query: 185 RLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICS-WWPFRS 235
              N+CPVCR  L +   + +  ++        GR N    +I S  WPFRS
Sbjct: 218 VQHNSCPVCRKELPSRGSSSSTQSSQN--RSTNGRENSRRRNIFSNLWPFRS 267

BLAST of Moc10g05010 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           S  PP S+    IE++PRV+I++ H   ++ C +C E F  G E RE+PCKH +H DCIV
Sbjct: 186 SGNPPASKS--AIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIV 245

Query: 181 PWLRLRNTCPVCRHTLQNIPV 202
           PWL +RN+CPVCR  L + P+
Sbjct: 246 PWLSIRNSCPVCRFELPSDPI 264

BLAST of Moc10g05010 vs. ExPASy Swiss-Prot
Match: Q6DIP3 (E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.6e-19
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0

Query: 119 ESSDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDC 178
           E++  PP   +   I+A+P ++ITE H+G    CP+CKE++ +G   R+LPC H +H+DC
Sbjct: 196 ENTGPPPADTEK--IQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDC 255

Query: 179 IVPWLRLRNTCPVCRHTL 197
           I+PWL   +TCPVCR +L
Sbjct: 256 IIPWLEQHDTCPVCRKSL 271

BLAST of Moc10g05010 vs. ExPASy TrEMBL
Match: A0A6J1D6A2 (E3 ubiquitin-protein ligase RDUF2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017708 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.0e-164
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV
Sbjct: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
           ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES
Sbjct: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV
Sbjct: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR
Sbjct: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240

Query: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 267
           RLRYADSGDSFFVIEPDSWMYSWLAN
Sbjct: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 266

BLAST of Moc10g05010 vs. ExPASy TrEMBL
Match: A0A6J1D6G1 (probable E3 ubiquitin-protein ligase RHC1A isoform X3 OS=Momordica charantia OX=3673 GN=LOC111017708 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.1e-161
Identity = 264/266 (99.25%), Postives = 264/266 (99.25%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV
Sbjct: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
           ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES
Sbjct: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV
Sbjct: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR
Sbjct: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240

Query: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 267
           RLRYADSGDSFFVIE  SWMYSWLAN
Sbjct: 241 RLRYADSGDSFFVIE-HSWMYSWLAN 265

BLAST of Moc10g05010 vs. ExPASy TrEMBL
Match: A0A6J1D7E1 (E3 ubiquitin-protein ligase RDUF2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017708 PE=4 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 3.9e-156
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV
Sbjct: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
           ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES
Sbjct: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV
Sbjct: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR
Sbjct: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240

Query: 241 RLRYADSGDSFFVIE 256
           RLRYADSGDSFFVIE
Sbjct: 241 RLRYADSGDSFFVIE 255

BLAST of Moc10g05010 vs. ExPASy TrEMBL
Match: A0A6J1FR69 (uncharacterized protein LOC111447704 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447704 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.2e-98
Identity = 176/266 (66.17%), Postives = 199/266 (74.81%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQN RPRIA N G+ RT T+HYYWCRICRRIIRIS GNPLEISI+CPFCSR LRHELDV
Sbjct: 1   MSQNFRPRIAFNAGIPRTRTVHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
            RARFH DPS FL +S        +SRR +P W FE DD  S +SWITLQFSRP     S
Sbjct: 61  VRARFHGDPSNFLQDSGN-HMTNTNSRRMIPRWTFETDDPHSLDSWITLQFSRP-----S 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
            ++ P +  D  +EAI RVKITE HL KDS C ICKEEF IGGE RELPC+HFYHSDCIV
Sbjct: 121 ENSNPAANSD--MEAIRRVKITESHLQKDSSCAICKEEFEIGGEVRELPCRHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLR+ NTCP+CR+TLQN   A+   ++   VEEG GR NGWW+ + SWWPFR IG  AR
Sbjct: 181 PWLRIHNTCPICRYTLQN---AIDGESSEESVEEGDGRGNGWWNVVRSWWPFRVIGDLAR 240

Query: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 267
           RL +AD GD+   +EPDSWMYSWLAN
Sbjct: 241 RLGFADYGDNLLALEPDSWMYSWLAN 255

BLAST of Moc10g05010 vs. ExPASy TrEMBL
Match: A0A6J1IZ58 (uncharacterized protein LOC111481213 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481213 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 7.0e-97
Identity = 175/266 (65.79%), Postives = 198/266 (74.44%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           MSQN RPRIA N G+ RT T+HYYWCRICRRIIRIS GNPLEISI+CPFCSR LRHELDV
Sbjct: 1   MSQNFRPRIAFNAGIPRTRTVHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDV 60

Query: 61  ARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPES 120
            RARFH DPS FL +S        +SRR +P W FE DD  S +SWITLQFSRP    E+
Sbjct: 61  VRARFHGDPSNFLQDSGN-HMTNTNSRRMIPRWTFETDDAHSLDSWITLQFSRP---SEN 120

Query: 121 SDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIV 180
           S+ P +S      EAI RVKITE HL KDS C ICKEEF IGGE +ELPC+HFYHSDCIV
Sbjct: 121 SNPPANS----DTEAIRRVKITESHLQKDSSCAICKEEFEIGGEVKELPCRHFYHSDCIV 180

Query: 181 PWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIGGWAR 240
           PWLR+ NTCPVCR+TLQN   A+   +    VEEG GR NGWW+ + SWWPFR IG  AR
Sbjct: 181 PWLRIHNTCPVCRYTLQN---AIDGESFEESVEEGDGRENGWWNVVRSWWPFRVIGDLAR 240

Query: 241 RLRYADSGDSFFVIEPDSWMYSWLAN 267
           RL +AD+GD+   +E DSWMYSWLA+
Sbjct: 241 RLGFADNGDNLLALETDSWMYSWLAD 255

BLAST of Moc10g05010 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 4.9e-34
Identity = 92/267 (34.46%), Postives = 122/267 (45.69%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRI-SFG--NPLEISISCPFCSR--LLR 60
           M+   RPR+ +N G  RT T HY++CR C R IR+ SFG   P+     CPFCSR   L 
Sbjct: 1   MTSAYRPRVIVN-GTRRTRTFHYFYCRHCSRTIRLRSFGLYGPI-----CPFCSREINLH 60

Query: 61  HELDVARARFHADPSGFLPNSSRLPDPRPDSRRNLPLWGFEIDDGPSPESWITLQ-FSRP 120
            ELD+ R                          + P W  + D       WITL   + P
Sbjct: 61  DELDIMRP-------------------------SRPYWDSDTD-------WITLHLINEP 120

Query: 121 RA-------------------LPESSDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPIC 180
           R+                   +P     PP + Q   IEA+  V IT+  L K+ +C IC
Sbjct: 121 RSNRFNHDDLVYNTDEEFADVMPSVQIGPPPASQS-AIEAVRTVIITDEDLVKEKVCAIC 180

Query: 181 KEEFRIGGEARELPCKHFYHSDCIVPWLRLRNTCPVCRHTLQNIPVAVAVAAAGTFVEEG 240
           KEEF +G E +EL C H YHS CIV WL + NTCP+CR  + N+ V+ +    G      
Sbjct: 181 KEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV-NLGVSESNVDEGGSYNID 227

Query: 241 GGRWNGWWSSICSWWPFRSIGGWARRL 243
             R N + + +CS WP R +  W   L
Sbjct: 241 NDRSNRFRTRVCSLWPLRMMIDWVHNL 227

BLAST of Moc10g05010 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 4.4e-27
Identity = 96/311 (30.87%), Postives = 131/311 (42.12%), Query Frame = 0

Query: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60
           +SQ +    +   G  RT  L  YWC  C R++RI+  NP E  I+CP C R    E++ 
Sbjct: 3   LSQPITRTDSAPNGAFRTFGL--YWCYHCDRMVRIASSNPSE--IACPRCLRQFVVEIET 62

Query: 61  AR----------------------------------ARFHADPSGFLPNSSR---LPD-- 120
            +                                   RF ADP  FL   SR    P+  
Sbjct: 63  RQRPRFTFNHATPPFDASPEARLLEALSLMFEPATIGRFGADP--FLRARSRNILEPESR 122

Query: 121 PRPDSRRNLPLWGFEIDDGPSP-ESWITLQFSRPRA-----LPESSDAPP---------- 180
           PRP  RR   L        P P  +++ L+ + P +     +   + APP          
Sbjct: 123 PRPQHRRRHSLDNVNNGGLPLPRRTYVILRPNNPTSPLGNIIAPPNQAPPRHVNSHDYFT 182

Query: 181 --------------DSR------QDCGIEAIPRVKITEYHLGKD-SICPICKEEFRIGGE 235
                         D R       +  I ++P VKIT  HL  D S C +C EEF +GG+
Sbjct: 183 GASSLEQLIEQLTQDDRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGD 242

BLAST of Moc10g05010 vs. TAIR 10
Match: AT3G10815.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-23
Identity = 71/213 (33.33%), Postives = 98/213 (46.01%), Query Frame = 0

Query: 24  YWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDVARARFHADPSGFLPNSSRLPDPR 83
           +WC  CRR I +      E   +C +C       L         D  G     +R    R
Sbjct: 10  HWCHTCRRGIHLQGEGRRE--GACIYCGNTFLERLYENVELSPFDLFGLAYEEAR---NR 69

Query: 84  PDSRRNLPLWGFEIDDGPSPESWITLQFSRPRALPESSDAPPDSRQDCGIEAIPRVKITE 143
            ++RR++      I +  S E      F+R  AL +    PP S     I ++ ++KI +
Sbjct: 70  RNNRRSV------IGEQLSFEE----LFNRLPALQDRRGPPPASL--AAINSLQKIKIRQ 129

Query: 144 YHLGKDSICPICKEEFRIGGEARELPCKHFYHSDCIVPWLRLRNTCPVCRHTLQNIPVAV 203
            HLG D  CP+C+++F IG +AR++PCKH YHS+CI+PWL  RNTCPVCR  L       
Sbjct: 130 KHLGLDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKELPQ----- 187

Query: 204 AVAAAGTFVEEGGGRWNGWWSSICSWWPFRSIG 237
                    +    R N  W      WPFRS G
Sbjct: 190 ---------DRNNSRKNPLW----HLWPFRSSG 187

BLAST of Moc10g05010 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 102.4 bits (254), Expect = 5.6e-22
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = 0

Query: 124 PPDSRQDCGIEAIPRVKITEYHL-GKDSICPICKEEFRIGGEARELPCKHFYHSDCIVPW 183
           PP  R    I+A+P +KI + HL   DS CP+CK+EF +G EA+++PC H YHSDCIVPW
Sbjct: 163 PPAPRS--AIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 222

Query: 184 LRLRNTCPVCRHTL---------QNIPVAVAVAAAGTFVEEGGGRWNG--WWSSICSWWP 237
           L   N+CPVCR  L         QN         + +       R NG    +   S+WP
Sbjct: 223 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 282

BLAST of Moc10g05010 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 102.4 bits (254), Expect = 5.6e-22
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = 0

Query: 124 PPDSRQDCGIEAIPRVKITEYHL-GKDSICPICKEEFRIGGEARELPCKHFYHSDCIVPW 183
           PP  R    I+A+P +KI + HL   DS CP+CK+EF +G EA+++PC H YHSDCIVPW
Sbjct: 163 PPAPRS--AIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 222

Query: 184 LRLRNTCPVCRHTL---------QNIPVAVAVAAAGTFVEEGGGRWNG--WWSSICSWWP 237
           L   N+CPVCR  L         QN         + +       R NG    +   S+WP
Sbjct: 223 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 282

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149238.16.1e-164100.00E3 ubiquitin-protein ligase RDUF2-like isoform X2 [Momordica charantia][more]
XP_022149239.16.3e-16199.25probable E3 ubiquitin-protein ligase RHC1A isoform X3 [Momordica charantia][more]
XP_022149237.18.0e-156100.00E3 ubiquitin-protein ligase RDUF2-like isoform X1 [Momordica charantia][more]
XP_022942766.14.5e-9866.17uncharacterized protein LOC111447704 isoform X2 [Cucurbita moschata] >XP_0229427... [more]
XP_022982371.11.4e-9665.79uncharacterized protein LOC111481213 isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
O221977.8e-2142.40Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
Q940T55.1e-2051.25E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ... [more]
Q94AK41.1e-1943.75E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
Q9SNB62.5e-1949.38E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ... [more]
Q6DIP39.6e-1946.15E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 ... [more]
Match NameE-valueIdentityDescription
A0A6J1D6A23.0e-164100.00E3 ubiquitin-protein ligase RDUF2-like isoform X2 OS=Momordica charantia OX=3673... [more]
A0A6J1D6G13.1e-16199.25probable E3 ubiquitin-protein ligase RHC1A isoform X3 OS=Momordica charantia OX=... [more]
A0A6J1D7E13.9e-156100.00E3 ubiquitin-protein ligase RDUF2-like isoform X1 OS=Momordica charantia OX=3673... [more]
A0A6J1FR692.2e-9866.17uncharacterized protein LOC111447704 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1IZ587.0e-9765.79uncharacterized protein LOC111481213 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT1G68180.14.9e-3434.46RING/U-box superfamily protein [more]
AT1G60360.14.4e-2730.87RING/U-box superfamily protein [more]
AT3G10815.11.0e-2333.33RING/U-box superfamily protein [more]
AT2G40830.25.6e-2242.40RING-H2 finger C1A [more]
AT2G40830.15.6e-2242.40RING-H2 finger C1A [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 152..192
e-value: 3.7E-8
score: 43.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 152..193
e-value: 9.9E-12
score: 45.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 152..193
score: 12.267982
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 118..199
e-value: 1.7E-19
score: 71.2
NoneNo IPR availablePANTHERPTHR15710:SF116ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEINcoord: 22..238
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 22..238
NoneNo IPR availableCDDcd16667RING-H2_RNF126_likecoord: 152..193
e-value: 7.8807E-23
score: 86.2176
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 133..199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g05010.1Moc10g05010.1mRNA