Moc10g04890 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g04890
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionneurofilament medium polypeptide-like
Locationchr10: 3404532 .. 3406259 (-)
RNA-Seq ExpressionMoc10g04890
SyntenyMoc10g04890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGTTGCGCCAGCAAGCCGAAGACCAGCGATGGAGTGGCTGTCCCAGTGCCCGCACCCACTCTCGTTGAGGTTGAGGTTGAATCGCTGAAGACAACGACGACAATGGCAGAAGTTTCCATCGTGGAGAAAGATGTCGAGGTCGTCGTAAATAAAGAAAAGAAGAGCGACGATGAAGTTGATGAGAAGAAGGTTGATGAGGGTGAGAAGAAAGTTGAGGAGGGCAACCAACTGCATTCTCTTGGATCTTTGCTCGTTGAGGTATTTATTTTCTCAATACCCTAATATACATCATTTTTACTATAATCATGGATTTACATAATAATAAACATTAACGATGAGCATTCACTTTTTCCTAAATTATAATTTTGAAAAAGAAATCCCACGGCAAAAAAAGGGAGGGGGTAATTACCTCTTAATTCGTCTTATATTAAAAATTTTATAGGAAAATTTAAAATAATTTAGATTTCTTTTAGTTCTATTAGTCGTTTTTTTTTTTAATATAACATGTGGTTGTGAGAGTTCGAACTCATAATCTATTGGTTAGAGCTACGTGTCTTAACCACTTTTAAATTATGTTCGGTTGGTTGGTGACTTGATAGTCTTTTAATTAATGAAATATATTAGTCTCTTGATAATATTATAATGTGAAATTTTACTCCGATTAAAAAAGTTATATGAAAACTATTTAATATTGTTTTTTAGAGTGAAGCGAAAAAAGAAGCAGTTGTGGGTAAAAAAGAAGTAGAAGTTCCAGTTCCAACAGAGCCCAAAAAAGAAGCAAAAGTTGAGGCAGGGAAATCGGTAGAACCAACACCGCTTGCAGCCGCCGCCGCTGCGGCGCCTGAGGTGGTAGAACCCAAGAAAATCACCACCGTCGAGGCGCCGGTGGAACCCATGAAAACCACCACCGTCGAGGCGCTGGTCGAACCCAAGAAAACCACCACCGTCGAGGCGCCGGTCGAACCCAAGAAAACCACCACTGTTGAGGCGGCGGTCGAACCCAAGAAAGTCACCACCGTTGAGGCGGCGGTCGAACCCAAGAAAATCACCACCGTTGAGGCAGCGGTCGAACCCAAGAAAATCATCACCGTTGAGGCGCCGGCAACACCCAAGAAAATCATCACCGTTGAGGCCCCGGCAACACCCCAGAAAATCACCACCGTCGTGGCGCCGGCAACACCCAAGAAAATCACCACCGTTGAGGCCCCGGCAACACCCCAGAAAATCACCACCGTCGACGCGCCGGCCACACCCACGAAAATAACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCACGAAAATCGCCACCGTCGACGCGCCGGCAACACCCAAGAAAATCACCACCGTCGACGCGCCTGCAACACCCACGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCCAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCACCGGCAACACCTCAGAAAATTACCACCGTCGAGGCGCCGGCAGCACCCCAGAAAACCACAACCATTGAGACGCCGGTGGCGACAGTGGCCAAAGCGTTGACAGAGGGAAAAAAGCAATAG

mRNA sequence

ATGGGTGGTTGCGCCAGCAAGCCGAAGACCAGCGATGGAGTGGCTGTCCCAGTGCCCGCACCCACTCTCGTTGAGGTTGAGGTTGAATCGCTGAAGACAACGACGACAATGGCAGAAGTTTCCATCGTGGAGAAAGATGTCGAGGTCGTCGTAAATAAAGAAAAGAAGAGCGACGATGAAGTTGATGAGAAGAAGGTTGATGAGGGTGAGAAGAAAGTTGAGGAGGGCAACCAACTGCATTCTCTTGGATCTTTGCTCGTTGAGAGTGAAGCGAAAAAAGAAGCAGTTGTGGGTAAAAAAGAAGTAGAAGTTCCAGTTCCAACAGAGCCCAAAAAAGAAGCAAAAGTTGAGGCAGGGAAATCGGTAGAACCAACACCGCTTGCAGCCGCCGCCGCTGCGGCGCCTGAGGTGGTAGAACCCAAGAAAATCACCACCGTCGAGGCGCCGGTGGAACCCATGAAAACCACCACCGTCGAGGCGCTGGTCGAACCCAAGAAAACCACCACCGTCGAGGCGCCGGTCGAACCCAAGAAAACCACCACTGTTGAGGCGGCGGTCGAACCCAAGAAAGTCACCACCGTTGAGGCGGCGGTCGAACCCAAGAAAATCACCACCGTTGAGGCAGCGGTCGAACCCAAGAAAATCATCACCGTTGAGGCGCCGGCAACACCCAAGAAAATCATCACCGTTGAGGCCCCGGCAACACCCCAGAAAATCACCACCGTCGTGGCGCCGGCAACACCCAAGAAAATCACCACCGTTGAGGCCCCGGCAACACCCCAGAAAATCACCACCGTCGACGCGCCGGCCACACCCACGAAAATAACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCACGAAAATCGCCACCGTCGACGCGCCGGCAACACCCAAGAAAATCACCACCGTCGACGCGCCTGCAACACCCACGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCCAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCACCGGCAACACCTCAGAAAATTACCACCGTCGAGGCGCCGGCAGCACCCCAGAAAACCACAACCATTGAGACGCCGGTGGCGACAGTGGCCAAAGCGTTGACAGAGGGAAAAAAGCAATAG

Coding sequence (CDS)

ATGGGTGGTTGCGCCAGCAAGCCGAAGACCAGCGATGGAGTGGCTGTCCCAGTGCCCGCACCCACTCTCGTTGAGGTTGAGGTTGAATCGCTGAAGACAACGACGACAATGGCAGAAGTTTCCATCGTGGAGAAAGATGTCGAGGTCGTCGTAAATAAAGAAAAGAAGAGCGACGATGAAGTTGATGAGAAGAAGGTTGATGAGGGTGAGAAGAAAGTTGAGGAGGGCAACCAACTGCATTCTCTTGGATCTTTGCTCGTTGAGAGTGAAGCGAAAAAAGAAGCAGTTGTGGGTAAAAAAGAAGTAGAAGTTCCAGTTCCAACAGAGCCCAAAAAAGAAGCAAAAGTTGAGGCAGGGAAATCGGTAGAACCAACACCGCTTGCAGCCGCCGCCGCTGCGGCGCCTGAGGTGGTAGAACCCAAGAAAATCACCACCGTCGAGGCGCCGGTGGAACCCATGAAAACCACCACCGTCGAGGCGCTGGTCGAACCCAAGAAAACCACCACCGTCGAGGCGCCGGTCGAACCCAAGAAAACCACCACTGTTGAGGCGGCGGTCGAACCCAAGAAAGTCACCACCGTTGAGGCGGCGGTCGAACCCAAGAAAATCACCACCGTTGAGGCAGCGGTCGAACCCAAGAAAATCATCACCGTTGAGGCGCCGGCAACACCCAAGAAAATCATCACCGTTGAGGCCCCGGCAACACCCCAGAAAATCACCACCGTCGTGGCGCCGGCAACACCCAAGAAAATCACCACCGTTGAGGCCCCGGCAACACCCCAGAAAATCACCACCGTCGACGCGCCGGCCACACCCACGAAAATAACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCACGAAAATCGCCACCGTCGACGCGCCGGCAACACCCAAGAAAATCACCACCGTCGACGCGCCTGCAACACCCACGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCCAGAAAATCACCACCGTCGAGGCGCCGGCAACACCCAAGAAAATCACCACCGTCGAGGCACCGGCAACACCTCAGAAAATTACCACCGTCGAGGCGCCGGCAGCACCCCAGAAAACCACAACCATTGAGACGCCGGTGGCGACAGTGGCCAAAGCGTTGACAGAGGGAAAAAAGCAATAG

Protein sequence

MGGCASKPKTSDGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDDEVDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPTEPKKEAKVEAGKSVEPTPLAAAAAAAPEVVEPKKITTVEAPVEPMKTTTVEALVEPKKTTTVEAPVEPKKTTTVEAAVEPKKVTTVEAAVEPKKITTVEAAVEPKKIITVEAPATPKKIITVEAPATPQKITTVVAPATPKKITTVEAPATPQKITTVDAPATPTKITTVEAPATPKKITTVEAPATPTKIATVDAPATPKKITTVDAPATPTKITTVEAPATPKKITTVEAPATPKKITTVEAPATPKKITTVEAPATPQKITTVEAPATPKKITTVEAPATPQKITTVEAPAAPQKTTTIETPVATVAKALTEGKKQ
Homology
BLAST of Moc10g04890 vs. NCBI nr
Match: XP_022149261.1 (neurofilament medium polypeptide-like [Momordica charantia])

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-77
Identity = 183/214 (85.51%), Postives = 187/214 (87.38%), Query Frame = 0

Query: 1   MGGCASKPKTSDGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDDE 60
           MGGCASKPKTSDGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDDE
Sbjct: 1   MGGCASKPKTSDGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDDE 60

Query: 61  VDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPTEPKKEAKVEAGK 120
           VDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPTEPKKEAKVEAGK
Sbjct: 61  VDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPTEPKKEAKVEAGK 120

Query: 121 SVEPTPLAAAAAAAPEVVEPKKITTVEAPVEPMKTTTVEALVEPKKTTTVEAPVEPKKTT 180
           SVEPTPLAAAAAAAPEVVEPKKITTVEAP  P K TTVEA   PKK TTVEAP  P+K T
Sbjct: 121 SVEPTPLAAAAAAAPEVVEPKKITTVEAPATPQKITTVEAPATPKKITTVEAPATPQKIT 180

Query: 181 TVEAAVEPKKVTTVEAAVEPKKITTVEAAVEPKK 215
           TVEA   P+K TT+E  V     T  +A  E KK
Sbjct: 181 TVEAPAAPQKTTTIETPV----ATVAKALTEGKK 210

BLAST of Moc10g04890 vs. NCBI nr
Match: XP_031737883.1 (histone H1-II [Cucumis sativus] >KAE8650510.1 hypothetical protein Csa_010936 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 6.2e-49
Identity = 202/430 (46.98%), Postives = 232/430 (53.95%), Query Frame = 0

Query: 1   MGGCASKPKTS-DGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDD 60
           MGGCASKPKTS +    P+P         ES K TT MA    V K+ +     EK+SDD
Sbjct: 1   MGGCASKPKTSIEKEVTPLPVE-------ESKKETTIMA----VLKEAKHENGSEKESDD 60

Query: 61  EVDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPT--EPKKEAKVE 120
           +V EKK+D  EKKVEE  Q  SLG LL++          KKEVE+P  T  E  KE KVE
Sbjct: 61  QVKEKKIDVREKKVEEDIQPLSLGCLLIQD---------KKEVEIPTETKKEEPKEVKVE 120

Query: 121 AGKSVEPTPLAAAAAAAPEVVEPKKITTVEAPVEPMKTTTVEALVEPKKTTTVEAPVEPK 180
           A K  E  P   AA  AP   EP+K+T +    EP K T V    EP+K T V A  EP+
Sbjct: 121 AAKPKEAAP--KAAIVAPTTAEPQKLTAIVDAAEPQKATAVVQAAEPQKPTAVVAAAEPQ 180

Query: 181 KTTTVEAAVEPKKVTTVEAAVEPKKITTVEAAVEPKKIITVEAPATPKKIITVEAPATPQ 240
           K T V AA EP+K T V AA EP+K T V AA EP+      A A P+K     A A PQ
Sbjct: 181 KVTAVVAAAEPQKPTPVVAAAEPQKPTPVVAAAEPQNATPAVAAAGPQKATPFVAAAEPQ 240

Query: 241 KITTVVAPATPKKIT-TVEAPATPQKITTVDAPATPTKITTVEAPATPKKITTVEAPATP 300
           K T VVA A P+K T  V A A PQK T V A A P K T V A A P+K T V A A P
Sbjct: 241 KATPVVAAAEPQKATPVVAAAAEPQKATPVVAAAEPQKATPVVAAAEPQKATPVVAAAEP 300

Query: 301 TKIATVDAPATPKKITTVDAPATPTKITTVEAPATPKKITTVEAPATPKKITTVEAPATP 360
            K   V A A P+K T V A A P K T V A A P+K T V A A P+K T V   A P
Sbjct: 301 QKATAVVAAAEPQKATAVVAAAEPQKATAVVAAAEPQKATAVVAAAEPQKATAVVTAAEP 360

Query: 361 KKITTVEAPATPQKITTVEAPATPKKITTVEAPATPQKITTVEAPAAPQKTT-------T 420
           +K T V A A PQK T V A A P+K T V A A PQK T V   A P+K T        
Sbjct: 361 QKATAVVAAAEPQKATAVVAAAEPQKATPVVAAAEPQKATPVVEAAEPKKATEGEKTGVE 408

BLAST of Moc10g04890 vs. NCBI nr
Match: XP_034670171.1 (cell wall protein DAN4 isoform X1 [Drosophila subobscura])

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-35
Identity = 134/329 (40.73%), Postives = 177/329 (53.80%), Query Frame = 0

Query: 107 PTEPKKEAKVEAGKSVEPTPLAAAAAAAPEVVEPKKITTVEAPVEPMKTTTVEALVEPKK 166
           PT  +     EA  + E T    A     E    +  TT E P    +TTT EA    ++
Sbjct: 112 PTTTEDTTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEVPTTTEETTTTEAPTTTEE 171

Query: 167 TTTVEAPVEPKKT------TTVEAAVEPKKVTTVEAAVEPKKITTVEAAVEPKKIITVEA 226
           TTT EAP    +T      TT E     ++ TT E     ++ TT EA    ++  T EA
Sbjct: 172 TTTTEAPTTTAETTNTEAPTTTEVPTTTEETTTTEFPTTTEETTTTEAPTTTEETTTTEA 231

Query: 227 PATPKKIITVEAPATPQKITTVVAPATPKKITTVEAPATPQKITTVDAPAT---PT---K 286
           P T ++  T EAP T ++ TT  AP T ++ TT EAP T ++ TT +AP T   PT   +
Sbjct: 232 PTTTEETTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEVPTTTEE 291

Query: 287 ITTVEAPATPKKITTVEAPATPTKIATVDAPATPKKITTVDAPATPTKITTVEAPATPKK 346
            TT EAP T ++ TT EAP T  +  T +AP T ++ TT +APAT  + TT EAP     
Sbjct: 292 TTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEETTTTEAPATTVETTTTEAP----- 351

Query: 347 ITTVEAPATPKKITTVEAPATPKKITTVEAPATPQKITTVEAPATPKKITTVEAPATPQK 406
            TT EAP TP++ TT EAP T ++ TT EAP T ++ TT EAP T ++ TT EAP T ++
Sbjct: 352 -TTTEAPTTPEETTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEE 411

Query: 407 ITTVEAPAAPQKTTTIETPVATVAKALTE 424
            TT EAP   ++TTT E P  T A   TE
Sbjct: 412 TTTTEAPTTTEETTTTEAPKTTEAPTTTE 434

BLAST of Moc10g04890 vs. NCBI nr
Match: XP_034670172.1 (proteoglycan 4 isoform X2 [Drosophila subobscura])

HSP 1 Score: 147.1 bits (370), Expect = 3.4e-31
Identity = 151/418 (36.12%), Postives = 202/418 (48.33%), Query Frame = 0

Query: 20  APTLVEVEVESLKTTTTMAEVSIVE-------KDVEVVVNKEKKSDDEV----DEKKVDE 79
           APT  EV   + +TTTT A  +  E              N E  +  EV    +E    E
Sbjct: 147 APTTTEVPTTTEETTTTEAPTTTEETTTTEAPTTTAETTNTEAPTTTEVPTTTEETTTTE 206

Query: 80  GEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPTEPKKEAKVEAGKSVEPTPLA 139
                EE     +  +   E+   +     ++      PT  ++    EA  + E T   
Sbjct: 207 FPTTTEETTTTEA-PTTTEETTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEETTTT 266

Query: 140 AAAAAAPEVVEPKKITTVEAPVEPMKTTTVEALVEPKKTTTVEAPVEPKKTTTVEAAVEP 199
            A     E    +  TT E P    +TTT EA    ++TTT EAP   ++TTT EA    
Sbjct: 267 EAPTTTEETTTTEAPTTTEVPTTTEETTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTT 326

Query: 200 KKVTTVEAAVEPKKITTVEAAVEPKKIITVEAPATPKKIITVEAPATPQKITTVVAPATP 259
           ++ TT EA     + TT EA        T EAP TP++  T EAP T ++ TT  AP T 
Sbjct: 327 EETTTTEAPATTVETTTTEAPT------TTEAPTTPEETTTTEAPTTTEETTTTEAPTTT 386

Query: 260 KKITTVEAPATPQKITTVDAPATPTKITTVEAPATPKKITTVEAPATPTKIATVDAPATP 319
           ++ TT EAP T ++ TT +AP T  + TT EAP T ++ TT EAP       T +AP T 
Sbjct: 387 EETTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEETTTTEAP------KTTEAPTTT 446

Query: 320 KKITTVDAPATPTKITTVEAPATPKKITTVEAPATPKKITTVEAPATPKKITTVEAP--- 379
           ++ TT +AP T  + TT EAP T ++ TT EAP T ++ TT EAP T  + TT EAP   
Sbjct: 447 EETTTTEAPTTTEETTTTEAPTTSEETTTTEAPTTTEETTTTEAPTTTVETTTTEAPTTT 506

Query: 380 ATPQKITTVEAPATPKKITTVEAPATPQKITTVEAPAAPQKTTTIETPVATVAKALTE 424
            T +  TT EAP T ++ TT EAP T ++ TT EAP   +  TT E    T A   TE
Sbjct: 507 TTTEDTTTTEAPTTTEETTTTEAPTTTEETTTTEAPTTTEVPTTTEDTTTTEAPTTTE 551

BLAST of Moc10g04890 vs. NCBI nr
Match: XP_013791657.2 (LOW QUALITY PROTEIN: mucin-2-like, partial [Limulus polyphemus])

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-30
Identity = 133/323 (41.18%), Postives = 160/323 (49.54%), Query Frame = 0

Query: 100 KEVEVPVPTEPKKEAKVEAGKS-VEPTPLAAAAAAAPEVVEPKKITTVEAPVEPMKTTTV 159
           K      PT   K    +A    V+PT        AP   +  K TT +AP    K TT 
Sbjct: 339 KPTTTQAPTTTNKPTTTQAQICVVKPT-----TTQAPTTTD--KRTTTQAPTTTNKPTTT 398

Query: 160 EALVEPKKTTTVEAPVEPKKTTTVEAAVEPKKVTTVEAAVEPKKITTVEAAVEPKKIITV 219
           +A     K TT E P     TTT EA +   + TT +      K TT++ +    K IT+
Sbjct: 399 QAPTTTDKPTTTEFPATTNNTTTTEAPITTNRPTTTQVPTTTNKPTTIQGSTTTDKAITL 458

Query: 220 EAPATPKKIITVEAPATPQK-----ITTVVAPATPKKITTVEAPATPQKITTVDAPATPT 279
           +AP+T  +  T E P T  K     ++T +AP T +  TT +AP T +K  T  AP T  
Sbjct: 459 QAPSTTNRPTTTEVPTTTNKQTTTQVSTTLAPTTTENPTTSQAPRTTKKSKTSQAPTTIN 518

Query: 280 KITTVEAPATPKKITTVEAPATPTKIATVDAPATPKKITTVDAPATPTKITTVEAPATPK 339
           K  T +AP T  K  T +AP T +K  T  AP T  K TT +AP T +K TT EAP T  
Sbjct: 519 KPMTTQAPTTTSKPMTTQAPTTTSKPMTTQAPTTSSKPTTTEAPTTTSKPTTTEAPTTTS 578

Query: 340 KITTVEAPATPKKITTVEAPATPKKITTVEAPATPQKITTVEAPATPKKITTVEAPATPQ 399
           K TT EAP T  K TT EAP T  K TT +AP T  K TT EAP T  K TT EAP T  
Sbjct: 579 KPTTTEAPTTTSKPTTTEAPTTTSKPTTTQAPTTTSKPTTTEAPTTTSKPTTTEAPTTTS 638

Query: 400 KITTVEAPAAPQKTTTIETPVAT 417
           K TT EAP    K TT E P  T
Sbjct: 639 KPTTTEAPTTTSKPTTTEGPTTT 654

BLAST of Moc10g04890 vs. ExPASy TrEMBL
Match: A0A6J1D7V2 (neurofilament medium polypeptide-like OS=Momordica charantia OX=3673 GN=LOC111017726 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 6.8e-78
Identity = 183/214 (85.51%), Postives = 187/214 (87.38%), Query Frame = 0

Query: 1   MGGCASKPKTSDGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDDE 60
           MGGCASKPKTSDGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDDE
Sbjct: 1   MGGCASKPKTSDGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDDE 60

Query: 61  VDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPTEPKKEAKVEAGK 120
           VDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPTEPKKEAKVEAGK
Sbjct: 61  VDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPTEPKKEAKVEAGK 120

Query: 121 SVEPTPLAAAAAAAPEVVEPKKITTVEAPVEPMKTTTVEALVEPKKTTTVEAPVEPKKTT 180
           SVEPTPLAAAAAAAPEVVEPKKITTVEAP  P K TTVEA   PKK TTVEAP  P+K T
Sbjct: 121 SVEPTPLAAAAAAAPEVVEPKKITTVEAPATPQKITTVEAPATPKKITTVEAPATPQKIT 180

Query: 181 TVEAAVEPKKVTTVEAAVEPKKITTVEAAVEPKK 215
           TVEA   P+K TT+E  V     T  +A  E KK
Sbjct: 181 TVEAPAAPQKTTTIETPV----ATVAKALTEGKK 210

BLAST of Moc10g04890 vs. ExPASy TrEMBL
Match: A0A3B0KBR2 (Blast:GATA zinc finger domain-containing protein 14 OS=Drosophila guanche OX=7266 GN=DGUA_6G014375 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.3e-27
Identity = 108/276 (39.13%), Postives = 146/276 (52.90%), Query Frame = 0

Query: 150 VEPMKTTTVEALVEPKKTTTVEAPVEPKKTTTVEAAVEPKKVTTVEAAVEPKKITTVEAA 209
           V P  TTT E     +  TT E P   ++TT+ EA    ++ TT EA    ++ TT EA 
Sbjct: 58  VPPEITTTTEETTTTEAPTTTEGPTTTEETTSTEAPTTAEETTTTEAPTTAEETTTTEAP 117

Query: 210 VEPKKIITVEAPATPKKIITVEAPATPQKITTVVAPATPKKITTVEAPATPQKITTVDAP 269
              ++  T EAP T ++  T EAP T ++ TT  AP      TT E   T +  TT +AP
Sbjct: 118 TTTEETTTTEAPTTIEETTTTEAPTTTEETTTTEAP------TTTEETTTSEPSTTTEAP 177

Query: 270 ATPTKITTVEAPATPKKITTVEAPATPTKIATVDAPATPKKITTVDAPATPTKITTVEAP 329
            T    TT EAP T ++ TT EAP T  +  T +A  T ++ TT +AP T  + TT EAP
Sbjct: 178 TTTETTTTTEAPTTTEETTTTEAPTTTVETTTTEASTTTEETTTTEAPTTTEETTTTEAP 237

Query: 330 ATPKKITTVEAPATPKKITTVEAPATPKKITTVEAPATPQKITTVEAPATPKKITTVEAP 389
            T ++ TT EAP T ++ TT EAP T ++ TT EA  T ++ TT EAP T +  TT EAP
Sbjct: 238 TTTEETTTTEAPTTTEETTTTEAPTTTEETTTTEASTTTEETTTTEAPTTTEVTTTTEAP 297

Query: 390 ATPQKITTVEAPAAPQKTTTIETPVATVAKALTEGK 426
            T ++ TT E     +  TT E     +    TE +
Sbjct: 298 TTTEETTTCEPSTTTEAPTTTEKVTTELTTPSTESQ 327

BLAST of Moc10g04890 vs. ExPASy TrEMBL
Match: A0A6A4RPY5 (Uncharacterized protein OS=Scophthalmus maximus OX=52904 GN=F2P81_025507 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.9e-26
Identity = 141/338 (41.72%), Postives = 168/338 (49.70%), Query Frame = 0

Query: 88  ESEAKKEAVVGKKEVEVP-VPTEPKKEAKVEAGKSVE--PTPLAAAAAAAPEVVE----P 147
           E+    EA    +  E P  P  P+     EA ++ E   TP A     APE  E    P
Sbjct: 86  EAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETP 145

Query: 148 KKITTVEAPVEPMKTTTVEALVEPKKTTTVEAPVEPKKTTTVEAAVEPKKVTTVEAAVEP 207
           +   T EAP  P    T EA   P+   T EAP  P+   T EA   P+   T EA   P
Sbjct: 146 EAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETP 205

Query: 208 KKITTVEAAVEPKKIITVEAPATPKKIITVEAPATPQKITTVVAPATPKKITTVEAPATP 267
           +   T EA   P+   T EAP TP+   T EAP TP+   T  AP TP+   T EAP TP
Sbjct: 206 EAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETP 265

Query: 268 QKITTVDAPATPTKITTVEAPATPKKITTVEAPATPTKIATVDAPATPKKITTVDAPATP 327
           +   T +AP TP    T EAP TP+   T EAP TP    T +AP TP+   T +AP TP
Sbjct: 266 EAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETP 325

Query: 328 TKITTVEAPATPKKITTVEAPATPKKITTVEAPATPKKITTVEAPATPQKITTVEAPATP 387
               T EAP TP+   T EAP TP+   T EAP TP+   T EAP TP+   T EAP TP
Sbjct: 326 EAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPEAPETPETPETPEAPETP 385

Query: 388 KKITTVEAPATPQKITTVEAPAAPQKTTTIETPVATVA 419
           +   T EAP TP+   T E P AP+   T ETP A  A
Sbjct: 386 EAPETPEAPETPETPETPETPEAPETPETPETPQAPEA 423

BLAST of Moc10g04890 vs. ExPASy TrEMBL
Match: A0A316PKA9 (VanY domain-containing protein OS=Oscillospiraceae bacterium OX=2485925 GN=DBY17_05900 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.0e-22
Identity = 85/216 (39.35%), Postives = 121/216 (56.02%), Query Frame = 0

Query: 200 PKKITTVEAAVEPKKIITVEAPATPKKIITVEAPATPQKITTVVAPATPKKITTVEAPAT 259
           P +    E    P++    EAPATP++    EAPA P++     APA P++    EAPA 
Sbjct: 10  PGEAREEEMPAAPEQAQAEEAPATPEQAQAKEAPAAPEQAQAEEAPAAPEQAQAEEAPAA 69

Query: 260 PQKITTVDAPATPTKITTVEAPATPKKITTVEAPATPTKIATVDAPATPKKITTVDAPAT 319
           P++    +APA P +    EAPA P++    +APATP +    +APA P++    +APAT
Sbjct: 70  PEQAQAEEAPAAPEQTQAEEAPAAPEQAQAEKAPATPEQAQAEEAPAAPEQAQAEEAPAT 129

Query: 320 PTKITTVEAPATPKKITTVEAPATPKKITTVEAPATPKKITTVEAPATPQKITTVEAPAT 379
           P +    EAPA P++    EAPA P++    EAPA P++    EAPA P++    EAPA 
Sbjct: 130 PEQAQAEEAPAAPEQAQAEEAPAAPEQAQAEEAPAAPEQAQAEEAPAAPEQAQAEEAPAA 189

Query: 380 PKKITTVEAPATPQKITTVEAPAAPQKTTTIETPVA 416
           P++    EAPA P++    EAPAAP++    E P A
Sbjct: 190 PEQAQAEEAPAAPEQAQAEEAPAAPEQAQAEEAPAA 225

BLAST of Moc10g04890 vs. ExPASy TrEMBL
Match: A0A0A0L739 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G210480 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-21
Identity = 121/285 (42.46%), Postives = 145/285 (50.88%), Query Frame = 0

Query: 1   MGGCASKPKTS-DGVAVPVPAPTLVEVEVESLKTTTTMAEVSIVEKDVEVVVNKEKKSDD 60
           MGGCASKPKTS +    P+P         ES K TT MA    V K+ +     EK+SDD
Sbjct: 1   MGGCASKPKTSIEKEVTPLPVE-------ESKKETTIMA----VLKEAKHENGSEKESDD 60

Query: 61  EVDEKKVDEGEKKVEEGNQLHSLGSLLVESEAKKEAVVGKKEVEVPVPT--EPKKEAKVE 120
           +V EKK+D  EKKVEE  Q  SLG LL++          KKEVE+P  T  E  KE KVE
Sbjct: 61  QVKEKKIDVREKKVEEDIQPLSLGCLLIQD---------KKEVEIPTETKKEEPKEVKVE 120

Query: 121 AGKSVEPTPLAAAAAAAPEVVEPKKITTVEAPVEPMKTTTVEALVEPKKTTTVEAPVEPK 180
           A K  E  P   AA  AP   EP+K+T +    EP K T V    EP+K T V A  EP+
Sbjct: 121 AAKPKEAAP--KAAIVAPTTAEPQKLTAIVDAAEPQKATAVVQAAEPQKPTAVVAAAEPQ 180

Query: 181 KTTTVEAAVEPKKVTTVEAAVEPKKITTVEAAVEPKKIITVEAPATPKKIITVEAPATPQ 240
           K T V AA EP+K T V+        T   AA  P+K     A A P+K   V A A PQ
Sbjct: 181 KATPVVAAAEPQKATPVQQL--NHNATPAVAAAGPQKATPFVAAAEPQKATPVVAAAEPQ 240

Query: 241 KITTVVAPATPKKITT-----VEAPATPQKITTVDAPATPTKITT 278
           K T VV  A PKK T      VE  +  +KI  ++A +      T
Sbjct: 241 KATPVVEAAEPKKATEGEKTGVEVESLVEKIAKIEAASVAVTTKT 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149261.11.4e-7785.51neurofilament medium polypeptide-like [Momordica charantia][more]
XP_031737883.16.2e-4946.98histone H1-II [Cucumis sativus] >KAE8650510.1 hypothetical protein Csa_010936 [C... [more]
XP_034670171.12.3e-3540.73cell wall protein DAN4 isoform X1 [Drosophila subobscura][more]
XP_034670172.13.4e-3136.12proteoglycan 4 isoform X2 [Drosophila subobscura][more]
XP_013791657.21.3e-3041.18LOW QUALITY PROTEIN: mucin-2-like, partial [Limulus polyphemus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D7V26.8e-7885.51neurofilament medium polypeptide-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A3B0KBR29.3e-2739.13Blast:GATA zinc finger domain-containing protein 14 OS=Drosophila guanche OX=726... [more]
A0A6A4RPY57.9e-2641.72Uncharacterized protein OS=Scophthalmus maximus OX=52904 GN=F2P81_025507 PE=4 SV... [more]
A0A316PKA99.0e-2239.35VanY domain-containing protein OS=Oscillospiraceae bacterium OX=2485925 GN=DBY17... [more]
A0A0A0L7391.5e-2142.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G210480 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g04890.1Moc10g04890.1mRNA