Moc10g04430 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g04430
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Caspase-6 protein
Location	chr10: 3081564 .. 3084563 (-)
RNA-Seq Expression	Moc10g04430
Synteny	Moc10g04430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTGTCGCTCTGGATCTCTGTCTCGCTCCCTAATTTCCACTGTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCCCCACCTCTCGCCGCTCGTCCTCGCCTTCAATCTCGTCGACTCTCCTTTTCAACTTCCAGGTACTTCACGAGTTTCTAAATTTTCTGTTTGGTTTCCGTGCGAAACGAGTTGATGAATGAATTACTTGGGAATTGGGATAGGATTGGAATGCTGTTGAATTGTAGTTTGTATGATGCCAGATTCCTGTTTCGTTCGTCGTTTTGATTTTCTTCAAGGATGTCTCTCGTCGTTTTGGGGGCTTTCTGTTTTATAATCGCTTAGCATATGGGTTTTAGTTCCGTTTTGTATTGTTTATTTCTATCATTTTAAGTCAGTAACTAGCATTTGTTTATTGGTTTGCTTAATTCAGTTTATATTATGATAAATTTCATGGATTTAAATACTGTGAGCTTTAACGAAGCTTTTTTTAATATTTGAAATTAGTTATACTGCTTATTACTTCTTTTTTTATGAGTAATTAATTTCATTGATTGATAAGATTTAGGTTAAATTGCATTTTAGCACCAATGTTTTTGCTTTAAATTCAATTTTGTCTTCATAGTTTTAAAAGGTTTCATTGTTGCCCAGGAGCAACAAAAATTTTAAGCTATAAGTTCAATCCGTAACCTTGGGTCTTTTTAAGTTGATTCAATTGTGAAATAAATGAAATATCTTGCACTAGAAAATGAATGGAAATTATTCGTTACACTTCAGGGCAAATTTGTCCTAGCCATTTTTTTGCTTTCTAGTCAAAACAATGTCTTAAAAATTTTATTTTTTTTGATAAGAAACATACATGATGTATTCCAATCAAAAGAAAGTAACAGCCTAAAGGCAGAGGGTTGAGAAAACCCCCCTAAGAACTATACAATCACAGCTTTCCAATCCCGTATAATCATTTGAAGACTATAATTACAAAACACCTTCTTGTGAATGATAGCCCACCAAGAAGCCGTTTGTTGTATATTCACACCACGAGAATCCACCGATGACTTCTTATCTTCAAAAAGTCTCCTATTCCTTTCTCTCCACAAAAGCCAAAGTAAAAAAATTGATTCTATTCTTTCAATCTCGACGATTGCTCAACGATTGAATAATAATAGGTTATTATGATTTCGAGAAAGCCGCCATGGTGAAATCGGTAGACACGCCACCGGGCCGTGAAGCTTATCCGGGGGATATAGAAATGCGCACTTTTGGAACTACCATTAAAAAATTATAATAGATTATTCATTGCTATGCTCTATCAGCACAATTCCATAGGATGAAAACTTTACCCTTTAGAGCCTTCCCCCCAAAACCTTATGAAATAAAATCATCCATCTTTTGGGGGAGACAAAAAGACACTCCCAAAATGGAAGCGAAGTGAAACCACACTGAAGAAGCCACCTGACAATGGAGGAAAAGATGATCTAAAGTCTCAGAATCCTTGCAACACAACGTACACACTGAAGGAGAAAGTGTCCAAAGGGGAAGTTTACGCTGAAGTTTGTCGGCTGTATTTATCCTTCGATAGAACACCGACCACAAAAACACTTTAACTTTCATAGGAATCTTAAAGTTTCAAATATGGAACGAAGTGGAAGTATTCATCTTTGGTGAAGGGGAAGTCAGGGCCAAAAATGCTGATTTAGTTGAAAAAGTCAGGGCCAACAATGTCTTAAAATCCAAATGTAATTTATCACATCTAAATGAATGTGATATCATGGAGCTCATTTTTAAATACCCACGTTGGATCTTTGTTACTCTTCACCAATGACATAGATGCTTGGTAAACATTAATCAAAAGATAGGGACGATAATGAGATTTTATGAGTACAGGGACTGAATTGAAACTAAGGTTAAACATAAAAATTAAAATGTAATTTAACCTAAAGATTATAAATGGGAGACAAAACACTTAGGAGCTTCCTTAAAGGTGCCTTAGTTAATGTAGGAAGGAGTGGAGTTACAAAAAGATTTTAAGCTAGAGCTCCAGAGAGAAGCAGACGAACAAATATTCTCCCAAATTGAAGAAATATTTTTCCTCAACTCTGCTAAGCTTAAAGTTTTTCAATCACATTAAAGGGAACCTCAGCAAGCATTTCCAATGTATTCTAATTTCCAACTTCCAAGAGTCTCCCCCTTATTCCATCTGTTGATTGGCGAATTTCTCACATTATTTCTTTTTATTATTTGATCAGAAACAATTTTATTGATAGCATGCAATTACAGAGAGGGGCAAATCACAATTCCATTGATAACAATTTCATTATTACTTATTATTACGACTCTCTTATAATCAACCTTGATGGGGATGTCCTTACTGTAGTCCTTTATGGCAGGGGTTTCCTCTTCCCACGCCCCTAGGATGTTTCTTCTCTGCTCTTCTTGTTTATAATGCACTAATGCAGTTTCCTACATGTGTGTGTATATATATATATGTATAAACCTTCTCTCTCTAATATTCACTTTATGGTGCGCACAATGCTCTGGATTTCTTTAATGAGTTACAGGCATGATTTTTGTTTGTTTCAAATCGTCCTCTCCAGGAATTTGGGAGAACTGGGATGTACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACCTGCCTGACATCCCACCTCTGTGTTAGCGCACGGGCCTTTTGCGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGCTAGTATCCTCTTTGTGAGTCTTGTTTACAAGAAAGATAAAAAAACATATAGTAAATGTTTCTTCATGAGGTCATTATTCAGTGTGACCATCTTTGTAATCATGATGTCATAACATCTCAACAAATTTTTGTGTTTGGATATATGATGTGGCATAACTTAGGCAGTTATTTTTATACCATTAAAATGTCATTTAATAAGAAGAAATTGGGATTGGGATTGATAGGGAGGAATGGAAAAGATGGGTGA

mRNA sequence

ATGGCGTGTCGCTCTGGATCTCTGTCTCGCTCCCTAATTTCCACTGTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCCCCACCTCTCGCCGCTCGTCCTCGCCTTCAATCTCGTCGACTCTCCTTTTCAACTTCCAGGAATTTGGGAGAACTGGGATGTACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACCTGCCTGACATCCCACCTCTGTGTTAGCGCACGGGCCTTTTGCGAGCTGTCTCATGGGAGGAATGGAAAAGATGGGTGA

Coding sequence (CDS)

ATGGCGTGTCGCTCTGGATCTCTGTCTCGCTCCCTAATTTCCACTGTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCCCCACCTCTCGCCGCTCGTCCTCGCCTTCAATCTCGTCGACTCTCCTTTTCAACTTCCAGGAATTTGGGAGAACTGGGATGTACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACCTGCCTGACATCCCACCTCTGTGTTAGCGCACGGGCCTTTTGCGAGCTGTCTCATGGGAGGAATGGAAAAGATGGGTGA

Protein sequence

MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG

Homology

[Close]

BLAST of Moc10g04430 vs. NCBI nr
Match: XP_022149349.1 (uncharacterized protein LOC111017781 isoform X2 [Momordica charantia])

HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60
          MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT
Sbjct: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60

Query: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
          QSLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 98

[Close]

BLAST of Moc10g04430 vs. NCBI nr
Match: XP_022149350.1 (uncharacterized protein LOC111017781 isoform X3 [Momordica charantia])

HSP 1 Score: 178.3 bits (451), Expect = 3.2e-41
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60
          MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT
Sbjct: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60

Query: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHG 93
          QSLLPMHGIMGATCLTSHLCVSARAFCELSHG
Sbjct: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHG 92

[Close]

BLAST of Moc10g04430 vs. NCBI nr
Match: XP_022149347.1 (uncharacterized protein LOC111017781 isoform X1 [Momordica charantia] >XP_022149348.1 uncharacterized protein LOC111017781 isoform X1 [Momordica charantia])

HSP 1 Score: 178.3 bits (451), Expect = 3.2e-41
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60
          MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT
Sbjct: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60

Query: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHG 93
          QSLLPMHGIMGATCLTSHLCVSARAFCELSHG
Sbjct: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHG 92

[Close]

BLAST of Moc10g04430 vs. NCBI nr
Match: XP_038883079.1 (uncharacterized protein LOC120074027 isoform X2 [Benincasa hispida])

HSP 1 Score: 176.8 bits (447), Expect = 9.2e-41
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 5  SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 64
          SGSLSRSLIS+VRASSLRSAPSLPRLRPPPLAARPR QSRRLSFSTSRNLGELGCTQSLL
Sbjct: 6  SGSLSRSLISSVRASSLRSAPSLPRLRPPPLAARPRPQSRRLSFSTSRNLGELGCTQSLL 65

Query: 65 PMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
          PMH IMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 66 PMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 99

[Close]

BLAST of Moc10g04430 vs. NCBI nr
Match: KAG7014957.1 (hypothetical protein SDJN02_22588, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 86/94 (91.49%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 5  SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 64
          SGSLSR+LIS+VR+SSLRS+PSLPRLR PP+ ARPRLQSRRLSFSTSRNLGELGCTQSLL
Sbjct: 6  SGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGCTQSLL 65

Query: 65 PMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
          PMH IMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 66 PMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 99

[Close]

BLAST of Moc10g04430 vs. ExPASy TrEMBL
Match: A0A6J1D6T0 (uncharacterized protein LOC111017781 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017781 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60
          MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT
Sbjct: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60

Query: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
          QSLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 98

[Close]

BLAST of Moc10g04430 vs. ExPASy TrEMBL
Match: A0A6J1D7P5 (uncharacterized protein LOC111017781 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017781 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60
          MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT
Sbjct: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60

Query: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHG 93
          QSLLPMHGIMGATCLTSHLCVSARAFCELSHG
Sbjct: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHG 92

[Close]

BLAST of Moc10g04430 vs. ExPASy TrEMBL
Match: A0A6J1D5H0 (uncharacterized protein LOC111017781 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111017781 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60
          MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT
Sbjct: 1  MACRSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCT 60

Query: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHG 93
          QSLLPMHGIMGATCLTSHLCVSARAFCELSHG
Sbjct: 61 QSLLPMHGIMGATCLTSHLCVSARAFCELSHG 92

[Close]

BLAST of Moc10g04430 vs. ExPASy TrEMBL
Match: A0A6J1J5V3 (uncharacterized protein LOC111482036 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482036 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.7e-38
Identity = 89/94 (94.68%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 5  SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 64
          SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL
Sbjct: 6  SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 65

Query: 65 PMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
           MH I+GATCLTSHLCVS RAFCELSHG NGKDG
Sbjct: 66 SMH-IVGATCLTSHLCVSVRAFCELSHGMNGKDG 98

[Close]

BLAST of Moc10g04430 vs. ExPASy TrEMBL
Match: A0A6J1J1R9 (uncharacterized protein LOC111482625 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482625 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.6e-38
Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 5  SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 64
          SGSLSR+LIS+VR SSLRS+PSLPRLR PPL ARPRLQSRRL+FSTSRNLGELGCTQSLL
Sbjct: 6  SGSLSRALISSVRFSSLRSSPSLPRLRLPPLTARPRLQSRRLAFSTSRNLGELGCTQSLL 65

Query: 65 PMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
          PMH IMGATCLTSHLCV ARAFCELSHGRNGKDG
Sbjct: 66 PMHSIMGATCLTSHLCVGARAFCELSHGRNGKDG 99

[Close]

BLAST of Moc10g04430 vs. TAIR 10
Match: AT4G34265.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 4.4e-17
Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 7  SLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 66
          S +RS +S T RA SLRS  P+LPRLRP   ++ PR   R  SF+  RNLGELGCT+S L
Sbjct: 5  SAARSFVSATARAPSLRSPPPTLPRLRPSQ-SSLPR--RRFASFTNPRNLGELGCTESFL 64

Query: 67 PMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
          P++ ++ A  LTSHL V+ RAFCELS+G NGKDG
Sbjct: 65 PLYNVVAAARLTSHLNVNLRAFCELSNG-NGKDG 94

[Close]

BLAST of Moc10g04430 vs. TAIR 10
Match: AT2G15000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 5.8e-17
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 5  SGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGELGCTQ 64
          +GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG LGCTQ
Sbjct: 6  AGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGALGCTQ 65

Query: 65 SLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
          S LP++ ++  + LTSHL V+ RAFCELS+G  GKDG
Sbjct: 66 SFLPLYSVVATSQLTSHLNVNLRAFCELSNG-IGKDG 97

[Close]

BLAST of Moc10g04430 vs. TAIR 10
Match: AT2G15000.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 5.8e-17
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 5  SGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGELGCTQ 64
          +GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG LGCTQ
Sbjct: 6  AGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGALGCTQ 65

Query: 65 SLLPMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 99
          S LP++ ++  + LTSHL V+ RAFCELS+G  GKDG
Sbjct: 66 SFLPLYSVVATSQLTSHLNVNLRAFCELSNG-IGKDG 97

[Close]

BLAST of Moc10g04430 vs. TAIR 10
Match: AT2G15000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 4.9e-16
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 5  SGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGELGCTQ 64
          +GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG LGCTQ
Sbjct: 6  AGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGALGCTQ 65

Query: 65 SLLPMHGIMGATCLTSHLCVSARAFCELSHG 93
          S LP++ ++  + LTSHL V+ RAFCELS+G
Sbjct: 66 SFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

[Close]

BLAST of Moc10g04430 vs. TAIR 10
Match: AT2G15000.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 4.9e-16
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 5  SGSLSRSLIS-TVRASSLRS-APSLPRLRPPPLAARPRLQSRRLSFST-SRNLGELGCTQ 64
          +GS +RS +S T R+ SLRS   +LPRLRPP    +  L SRR +FS+ SRNLG LGCTQ
Sbjct: 6  AGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGALGCTQ 65

Query: 65 SLLPMHGIMGATCLTSHLCVSARAFCELSHG 93
          S LP++ ++  + LTSHL V+ RAFCELS+G
Sbjct: 66 SFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

The following BLAST results are available for this feature:

BLAST of Moc10g04430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149349.1	3.6e-45	100.00	uncharacterized protein LOC111017781 isoform X2 [Momordica charantia]	[more]
XP_022149350.1	3.2e-41	100.00	uncharacterized protein LOC111017781 isoform X3 [Momordica charantia]	[more]
XP_022149347.1	3.2e-41	100.00	uncharacterized protein LOC111017781 isoform X1 [Momordica charantia] >XP_022149...	[more]
XP_038883079.1	9.2e-41	96.81	uncharacterized protein LOC120074027 isoform X2 [Benincasa hispida]	[more]
KAG7014957.1	1.1e-38	91.49	hypothetical protein SDJN02_22588, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Moc10g04430 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc10g04430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6T0	1.7e-45	100.00	uncharacterized protein LOC111017781 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D7P5	1.5e-41	100.00	uncharacterized protein LOC111017781 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D5H0	1.5e-41	100.00	uncharacterized protein LOC111017781 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1J5V3	2.7e-38	94.68	uncharacterized protein LOC111482036 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J1R9	4.6e-38	90.43	uncharacterized protein LOC111482625 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Moc10g04430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34265.1	4.4e-17	58.51	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.2	5.8e-17	56.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.3	5.8e-17	56.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.1	4.9e-16	56.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.4	4.9e-16	56.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..43
None	No IPR available	PANTHER	PTHR33156:SF26	OS12G0592200 PROTEIN	coord: 1..93
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g04430.1	Moc10g04430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane