Moc10g03840 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g03840
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	agamous-like MADS-box protein AGL62
Location	chr10: 2692486 .. 2693319 (-)
RNA-Seq Expression	Moc10g03840
Synteny	Moc10g03840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGAGCAGAGGCAGGCAGAAGGTGGAGATGGTGAAGATGCCTAATGAGAGCAACCTTCAGGTAACCTTTTCGAAGCGTCGATCTGGCCTCTTCAAGAAAGCTAGTGAGTTGTGCACGCTTTGTGGTGCCGAGATTGCCATCATCGTCTTCTCGCCGGGGAAGAAGGTGTTCTCTTTCGGCCACCCTTGTGTCGAGGCTCTGATTGAACGCTTTGTGACTCGAAACCCCCCGCCGAGTTCTGGTACGCTCCAGTTGATCGAGGCTCATCGAAATGCCAATGTTCGGGAACTAAATTCGCAGCTGACACAGGTGCTGAATCAACTAGAGATGGAGCGAAAACGAGGCGAAGAGTTAAACAAGCTGCGAAAGGCAAGCCAGGTATTGAATCACTGTTAAACTAAAAAAATTGGTATTTTACATAATTCTTAATATCCTCTTAATATTAATTTAATGGATGAAATTCAATACGTTAACTATTAAATTTAAAAGTTTAAGTTGATGCGTTACATTATAATTAATCTTTTATATATATATATATATTCTTAACTTAAGGCACAATTTTGGTGGGAGCTCCCCATCGAAGAAATGGAAATGAATCAACTCGAGCAGCTCAAGACATCGTTGGAGGAGTTGAAGAAGAATGTCACACAACATGCTGATCGGATTTTGGTTCAAACCTCAAATGGCAACCCACCACCACAATACTTCCCGACTCCGTCGCCTGCAAACCCGAACCAACAAGGCGGCGTTTTCGTCGTGGATCCAAAGAACATGATCTCTCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

mRNA sequence

ATGAGGAAGAGCAGAGGCAGGCAGAAGGTGGAGATGGTGAAGATGCCTAATGAGAGCAACCTTCAGGTAACCTTTTCGAAGCGTCGATCTGGCCTCTTCAAGAAAGCTAGTGAGTTGTGCACGCTTTGTGGTGCCGAGATTGCCATCATCGTCTTCTCGCCGGGGAAGAAGGTGTTCTCTTTCGGCCACCCTTGTGTCGAGGCTCTGATTGAACGCTTTGTGACTCGAAACCCCCCGCCGAGTTCTGGTACGCTCCAGTTGATCGAGGCTCATCGAAATGCCAATGTTCGGGAACTAAATTCGCAGCTGACACAGGTGCTGAATCAACTAGAGATGGAGCGAAAACGAGGCGAAGAGTTAAACAAGCTGCGAAAGGCAAGCCAGGCACAATTTTGGTGGGAGCTCCCCATCGAAGAAATGGAAATGAATCAACTCGAGCAGCTCAAGACATCGTTGGAGGAGTTGAAGAAGAATGTCACACAACATGCTGATCGGATTTTGGTTCAAACCTCAAATGGCAACCCACCACCACAATACTTCCCGACTCCGTCGCCTGCAAACCCGAACCAACAAGGCGGCGTTTTCGTCGTGGATCCAAAGAACATGATCTCTCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

Coding sequence (CDS)

ATGAGGAAGAGCAGAGGCAGGCAGAAGGTGGAGATGGTGAAGATGCCTAATGAGAGCAACCTTCAGGTAACCTTTTCGAAGCGTCGATCTGGCCTCTTCAAGAAAGCTAGTGAGTTGTGCACGCTTTGTGGTGCCGAGATTGCCATCATCGTCTTCTCGCCGGGGAAGAAGGTGTTCTCTTTCGGCCACCCTTGTGTCGAGGCTCTGATTGAACGCTTTGTGACTCGAAACCCCCCGCCGAGTTCTGGTACGCTCCAGTTGATCGAGGCTCATCGAAATGCCAATGTTCGGGAACTAAATTCGCAGCTGACACAGGTGCTGAATCAACTAGAGATGGAGCGAAAACGAGGCGAAGAGTTAAACAAGCTGCGAAAGGCAAGCCAGGCACAATTTTGGTGGGAGCTCCCCATCGAAGAAATGGAAATGAATCAACTCGAGCAGCTCAAGACATCGTTGGAGGAGTTGAAGAAGAATGTCACACAACATGCTGATCGGATTTTGGTTCAAACCTCAAATGGCAACCCACCACCACAATACTTCCCGACTCCGTCGCCTGCAAACCCGAACCAACAAGGCGGCGTTTTCGTCGTGGATCCAAAGAACATGATCTCTCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

Protein sequence

MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEELNKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYFPTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF

Homology

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BLAST of Moc10g03840 vs. NCBI nr
Match: XP_022149295.1 (agamous-like MADS-box protein AGL62 [Momordica charantia])

HSP 1 Score: 435.3 bits (1118), Expect = 3.2e-118
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180
           NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF
Sbjct: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180

Query: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
           PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 219

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BLAST of Moc10g03840 vs. NCBI nr
Match: XP_022942821.1 (agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.1 bits (1050), Expect = 2.5e-110
Identity = 204/219 (93.15%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180
           NKLRKA+Q Q WWELPIEEME++QLEQLK SL+ELKKNVTQ ADRIL+QTSNGNPPPQ+F
Sbjct: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
           PTP+PANPNQQGGV+VVD KNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

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BLAST of Moc10g03840 vs. NCBI nr
Match: KAG7030923.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 406.0 bits (1042), Expect = 2.1e-109
Identity = 203/219 (92.69%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180
           NKLRKA+Q Q WWELPIEEME++QLEQLK SL+ELKKNVTQ ADRIL+QTSNGNPPPQ+F
Sbjct: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
            TP+PANPNQQGGV+VVD KNMISHLPYNYGSYGSRGFF
Sbjct: 181 STPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

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BLAST of Moc10g03840 vs. NCBI nr
Match: XP_022975753.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 2.7e-109
Identity = 203/219 (92.69%), Postives = 211/219 (96.35%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180
           NKLRKA+Q Q WWELPIEEME+ QLEQLK SL+ELKKNV Q ADRIL+QTSNGNPPPQ+F
Sbjct: 121 NKLRKANQPQCWWELPIEEMELYQLEQLKLSLDELKKNVMQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
           PTP+PANPNQQGGV+VVD KNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

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BLAST of Moc10g03840 vs. NCBI nr
Match: XP_008454428.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0044310.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 384.0 bits (985), Expect = 8.5e-103
Identity = 201/226 (88.94%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQT-SNGNPP--- 180
           NKLRKASQAQ WWELPIEEMEM+QLEQLK SL+ELKKNVTQ ADRIL+QT SN NPP   
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 --PQYFPTPSPAN-PNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
             P   PTP+  N PNQQ G+FVVDPKN+ISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

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BLAST of Moc10g03840 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50
Identity = 105/168 (62.50%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++KS+GRQK+EMVKM NESNLQVTFSKRRSGLFKKASELCTLCGAE+AI+VFSPG+KVFS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPCVEALIERFVTRN--PPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGE 120
           FGHP V+++I+RF+  N  PP     +QL E  RN+ V++LN+ LTQVL+QLE E+K+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELNKLRKASQA-QFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADR 166
           EL K+R+ ++A   WWE P+EE+ ++QLE  K +LE LKK VT  A R
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

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BLAST of Moc10g03840 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 97/197 (49.24%), Postives = 131/197 (66.50%), Query Frame = 0


Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           ++S GRQK+ MVK+  ES+ QVTFSKRR+GLFKKASELCTLCGAEI IIVFSP KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEELN 121
           GHP VE++++R+V+RN    + + QL      A   ELN QLT +L+++E E+K+G+ + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 178

Query: 122 KLRKASQAQF---WWELPIEEMEMNQLEQLKTSLEELKKNV-------TQHADRILVQTS 181
           ++RK S  +    WWE P+EEM M QL+++K +LEEL+K V        +  D +     
Sbjct: 179 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLD 238

Query: 182 NGNPPPQYFPTPS-PAN 188
           N    P Y   PS P+N
Sbjct: 239 NKVTVPPYVNMPSGPSN 253

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BLAST of Moc10g03840 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.4e-29
Identity = 75/161 (46.58%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RK+ GR+K+E+VKM NESNLQVTFSKRRSGLFKK SELCTLC AEIAIIVFSP  K +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL- 121
           GHP V  L++  + R            E+     ++ LN  LT+V+ + E E++  + + 
Sbjct: 63  GHPNVNKLLDHSLGR--VIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIV 122

Query: 122 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQ 162
              R+   A+ WW     E+ + Q   +K  LE LKK V +
Sbjct: 123 QNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDE 161

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BLAST of Moc10g03840 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28
Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++K+ GR+KVE+VKM  ESNLQVTFSKR++GLFKKASE CTLC A+IA+IVFSP  KVFS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERK-RGEE 120
           FGHP V+ L++ F  R          L E++   +V+ LN   T+V  ++E E+K +   
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSR 121

Query: 121 LNKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTS 172
               R+   A+ WW     E+ ++Q   +   L++LKK V + A +++ QT+
Sbjct: 122 AQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTN 171

[Close]

BLAST of Moc10g03840 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.1e-19
Identity = 59/149 (39.60%), Postives = 94/149 (63.09%), Query Frame = 0


Query: 6   GRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPC 65
           GR+K++M  + + +  QVTFSKRR+GLFKKASEL TLC AE+ I+VFSPG K FS+G P 
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEE-LNKLR 125
           ++++ ERF+       SG  +    +R   ++ L+ +L  +  ++E E++RGE+   KL 
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYR-PKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 121

Query: 126 KASQAQFWWELPIEEMEMNQLEQLKTSLE 154
            A   +F  +  IE + +++L + K  L+
Sbjct: 122 SAGDERF--KESIETLTLDELNEYKDRLQ 147

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BLAST of Moc10g03840 vs. ExPASy TrEMBL
Match: A0A6J1D5B6 (agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC111017745 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.6e-118
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180
           NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF
Sbjct: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180

Query: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
           PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 219

[Close]

BLAST of Moc10g03840 vs. ExPASy TrEMBL
Match: A0A6J1FPY5 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111447736 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 204/219 (93.15%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180
           NKLRKA+Q Q WWELPIEEME++QLEQLK SL+ELKKNVTQ ADRIL+QTSNGNPPPQ+F
Sbjct: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
           PTP+PANPNQQGGV+VVD KNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

[Close]

BLAST of Moc10g03840 vs. ExPASy TrEMBL
Match: A0A6J1IK72 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111476097 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109
Identity = 203/219 (92.69%), Postives = 211/219 (96.35%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180
           NKLRKA+Q Q WWELPIEEME+ QLEQLK SL+ELKKNV Q ADRIL+QTSNGNPPPQ+F
Sbjct: 121 NKLRKANQPQCWWELPIEEMELYQLEQLKLSLDELKKNVMQQADRILIQTSNGNPPPQFF 180

Query: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
           PTP+PANPNQQGGV+VVD KNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

[Close]

BLAST of Moc10g03840 vs. ExPASy TrEMBL
Match: A0A5A7TM75 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00310 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.1e-103
Identity = 201/226 (88.94%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQT-SNGNPP--- 180
           NKLRKASQAQ WWELPIEEMEM+QLEQLK SL+ELKKNVTQ ADRIL+QT SN NPP   
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 --PQYFPTPSPAN-PNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
             P   PTP+  N PNQQ G+FVVDPKN+ISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

[Close]

BLAST of Moc10g03840 vs. ExPASy TrEMBL
Match: A0A1S3BYP6 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.1e-103
Identity = 201/226 (88.94%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQT-SNGNPP--- 180
           NKLRKASQAQ WWELPIEEMEM+QLEQLK SL+ELKKNVTQ ADRIL+QT SN NPP   
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 --PQYFPTPSPAN-PNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 220
             P   PTP+  N PNQQ G+FVVDPKN+ISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

[Close]

BLAST of Moc10g03840 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-51
Identity = 105/168 (62.50%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++KS+GRQK+EMVKM NESNLQVTFSKRRSGLFKKASELCTLCGAE+AI+VFSPG+KVFS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPCVEALIERFVTRN--PPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGE 120
           FGHP V+++I+RF+  N  PP     +QL E  RN+ V++LN+ LTQVL+QLE E+K+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELNKLRKASQA-QFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADR 166
           EL K+R+ ++A   WWE P+EE+ ++QLE  K +LE LKK VT  A R
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

[Close]

BLAST of Moc10g03840 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 97/197 (49.24%), Postives = 131/197 (66.50%), Query Frame = 0


Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           ++S GRQK+ MVK+  ES+ QVTFSKRR+GLFKKASELCTLCGAEI IIVFSP KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEELN 121
           GHP VE++++R+V+RN    + + QL      A   ELN QLT +L+++E E+K+G+ + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 178

Query: 122 KLRKASQAQF---WWELPIEEMEMNQLEQLKTSLEELKKNV-------TQHADRILVQTS 181
           ++RK S  +    WWE P+EEM M QL+++K +LEEL+K V        +  D +     
Sbjct: 179 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLD 238

Query: 182 NGNPPPQYFPTPS-PAN 188
           N    P Y   PS P+N
Sbjct: 239 NKVTVPPYVNMPSGPSN 253

[Close]

BLAST of Moc10g03840 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-36
Identity = 97/227 (42.73%), Postives = 138/227 (60.79%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           +R ++GRQK+EM KM NESNLQVTFSKRR GLFKKASELCTL GAEI +IVFSPG KVFS
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPS-----SGTLQLIEAHRNANVRELNSQLTQVLNQLEMERK 120
           FGHP V+ LI RF   N   +     +  LQL+E   + N++ LN+ LT+VL   E E++
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQ 121

Query: 121 RGEELNKLRKA-SQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGN 180
           +   L+ L+++  Q   W+E  +++++MN+  QL ++L+++KK +     R + Q S  N
Sbjct: 122 KRMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLV----REMSQYSQVN 181

Query: 181 PPPQYFPTPSPANPNQQGGVFVVDPK--------NMI--SHLPYNYG 212
               YF   S        G+ + D +        NM+  +H P  +G
Sbjct: 182 VSQNYFGQSSGVIGGGNVGIDLFDQRRNAFNYNPNMVFPNHTPPMFG 224

[Close]

BLAST of Moc10g03840 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-30
Identity = 75/161 (46.58%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RK+ GR+K+E+VKM NESNLQVTFSKRRSGLFKK SELCTLC AEIAIIVFSP  K +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL- 121
           GHP V  L++  + R            E+     ++ LN  LT+V+ + E E++  + + 
Sbjct: 63  GHPNVNKLLDHSLGR--VIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIV 122

Query: 122 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQ 162
              R+   A+ WW     E+ + Q   +K  LE LKK V +
Sbjct: 123 QNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDE 161

[Close]

BLAST of Moc10g03840 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 128.3 bits (321), Expect = 7.8e-30
Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 0


Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++K+ GR+KVE+VKM  ESNLQVTFSKR++GLFKKASE CTLC A+IA+IVFSP  KVFS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERK-RGEE 120
           FGHP V+ L++ F  R          L E++   +V+ LN   T+V  ++E E+K +   
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSR 121

Query: 121 LNKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTS 172
               R+   A+ WW     E+ ++Q   +   L++LKK V + A +++ QT+
Sbjct: 122 AQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTN 171

The following BLAST results are available for this feature:

BLAST of Moc10g03840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149295.1	3.2e-118	100.00	agamous-like MADS-box protein AGL62 [Momordica charantia]	[more]
XP_022942821.1	2.5e-110	93.15	agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous...	[more]
KAG7030923.1	2.1e-109	92.69	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022975753.1	2.7e-109	92.69	agamous-like MADS-box protein AGL62 [Cucurbita maxima]	[more]
XP_008454428.1	8.5e-103	88.94	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0044310.1 agam...	[more]

BLAST of Moc10g03840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	1.7e-50	62.50	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	1.5e-38	49.24	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9LMM8	6.4e-29	46.58	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O80807	1.1e-28	44.19	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
O64703	2.1e-19	39.60	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of Moc10g03840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5B6	1.6e-118	100.00	agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC1110177...	[more]
A0A6J1FPY5	1.2e-110	93.15	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11144773...	[more]
A0A6J1IK72	1.3e-109	92.69	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111476097 ...	[more]
A0A5A7TM75	4.1e-103	88.94	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BYP6	4.1e-103	88.94	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4...	[more]

BLAST of Moc10g03840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	1.2e-51	62.50	AGAMOUS-like 62	[more]
AT2G24840.1	1.1e-39	49.24	AGAMOUS-like 61	[more]
AT4G36590.1	2.5e-36	42.73	MADS-box transcription factor family protein	[more]
AT1G01530.1	4.6e-30	46.58	AGAMOUS-like 28	[more]
AT1G65360.1	7.8e-30	44.19	AGAMOUS-like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..165
None	No IPR available	COILS	Coil	Coil	coord: 93..120
None	No IPR available	GENE3D	6.10.140.920		coord: 83..175 e-value: 1.5E-19 score: 72.3
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..176
None	No IPR available	PANTHER	PTHR11945:SF677	AGAMOUS-LIKE MADS-BOX PROTEIN AGL62	coord: 5..176
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 42..63 score: 41.44 coord: 27..42 score: 67.1 coord: 7..27 score: 46.13
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 1.7E-30 score: 117.3
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 16..61 e-value: 3.4E-24 score: 84.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 23.548571
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 17..81 e-value: 3.0E-27 score: 96.2
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 6..78
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 6..73 e-value: 6.5311E-35 score: 116.883

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g03840.1	Moc10g03840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding