Moc10g03600 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g03600
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr10: 2544593 .. 2545161 (+)
RNA-Seq ExpressionMoc10g03600
SyntenyMoc10g03600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGGAAGACCGCGTCTTCTTCAGCATATCAATCATATGGGGATTGATTGGGCCAAAGCGGATTTTCGGATCGCAAGGATTCTATGGCACTTTGAACTGGTTCTTCCTTGTTGGTGCAGTTGGGCCAGTTTTAGTATGGCTACTTCACAGAGCCTTCCCAAAACAATCCTGGATTCCTCTCATCAATCTCCCCGTCTTGCTCGGGGCGACCGCAAATATGGCCCTGAACTACAATTCCTGGATTCTGATAGGAACCGTGTTCAACTTCTTCGTCTTCCGCTATCGGAAGCAGTGGTGGCAGAGATACAACTACATTCTTTCAGCAGCATTGGATGGGGGATTGGCTTTCATGGCTGTGTTGCTGTACTTATCATTTGGCATGAAGGGAAAGAGTGTGGACTGGTGGGGCACTGCAGGTGAGCACTGTGACTTGGCTTCTTGTCCTACAGCCAAGGGTGTGGTGGTTTATGGCTGCCCACTCTTCTGAACTTGCTCTGTGAAGTTACATACAACACTCCAAGATGGCCGATGATATCTTTGGTGGGAATCATCATGATGTGGTCTAA

mRNA sequence

ATGTCCGGAAGACCGCGTCTTCTTCAGCATATCAATCATATGGGGATTGATTGGGCCAAAGCGGATTTTCGGATCGCAAGGATTCTATGGCACTTTGAACTGGTTCTTCCTTGTTGGTGCAGTTGGGCCAGTTTTAGTATGGCTACTTCACAGAGCCTTCCCAAAACAATCCTGGATTCCTCTCATCAATCTCCCCGTCTTGCTCGGGGCGACCGCAAATATGGCCCTGAACTACAATTCCTGGATTCTGATAGGAACCGTGTTCAACTTCTTCGTCTTCCGCTATCGGAAGCAGTGGTGGCAGAGATACAACTACATTCTTTCAGCAGCATTGGATGGGGGATTGGCTTTCATGGCTGTGTTGCTGTACTTATCATTTGGCATGAAGGGAAAGAGTGTGGACTGGTGGGGCACTGCAGTTACATACAACACTCCAAGATGGCCGATGATATCTTTGGTGGGAATCATCATGATGTGGTCTAA

Coding sequence (CDS)

ATGTCCGGAAGACCGCGTCTTCTTCAGCATATCAATCATATGGGGATTGATTGGGCCAAAGCGGATTTTCGGATCGCAAGGATTCTATGGCACTTTGAACTGGTTCTTCCTTGTTGGTGCAGTTGGGCCAGTTTTAGTATGGCTACTTCACAGAGCCTTCCCAAAACAATCCTGGATTCCTCTCATCAATCTCCCCGTCTTGCTCGGGGCGACCGCAAATATGGCCCTGAACTACAATTCCTGGATTCTGATAGGAACCGTGTTCAACTTCTTCGTCTTCCGCTATCGGAAGCAGTGGTGGCAGAGATACAACTACATTCTTTCAGCAGCATTGGATGGGGGATTGGCTTTCATGGCTGTGTTGCTGTACTTATCATTTGGCATGAAGGGAAAGAGTGTGGACTGGTGGGGCACTGCAGTTACATACAACACTCCAAGATGGCCGATGATATCTTTGGTGGGAATCATCATGATGTGGTCTAA

Protein sequence

MSGRPRLLQHINHMGIDWAKADFRIARILWHFELVLPCWCSWASFSMATSQSLPKTILDSSHQSPRLARGDRKYGPELQFLDSDRNRVQLLRLPLSEAVVAEIQLHSFSSIGWGIGFHGCVAVLIIWHEGKECGLVGHCSYIQHSKMADDIFGGNHHDVV
Homology
[Close]
BLAST of Moc10g03600 vs. ExPASy TrEMBL
Match: A0A1D1ZJZ4 (Uncharacterized protein OS=Anthurium amnicola OX=1678845 GN=g.123597 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.9e-06
Identity = 46/137 (33.58%), Postives = 62/137 (45.26%), Query Frame = 0 

Query: 5   PRLLQHINHMGIDWAKADFRIARILWHFELVLPCWCSWASFSMATSQSLPKTILDSSHQS 64
           P  L+ +  MG    +   R  R +    + +P   S A   +   Q +P   +D+  Q 
Sbjct: 187 PGHLRRLGDMGAHRPRPALRPRRAVQEPGVAVPGGGSAAGAGVGVEQVVPGAEVDTPGQH 246

Query: 65  P---RLARGDRK-YGPELQFLDSDRNRVQLLRLPLSEAVVAEIQLHSFSSIGWGIGFHGC 124
           P      RGD   Y  + + L   R+RVQLLRLP+ E VVAE+QL +      G G HGC
Sbjct: 247 PGHLLRVRGDAAGYAHQHRDLAGHRHRVQLLRLPVPEGVVAEVQLRAVGGARCGDGLHGC 306

Query: 125 VAVLIIWHEGKECGLVG 138
             VL       E  LVG
Sbjct: 307 APVLRPAEREPEPELVG 323

[Close]
BLAST of Moc10g03600 vs. ExPASy TrEMBL
Match: C7IY62 (Os02g0695800 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0695800 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.1e-04
Identity = 37/82 (45.12%), Postives = 45/82 (54.88%), Query Frame = 0 

Query: 58  LDSSHQSPRL-ARGDRKYGPELQFLDSDRNRVQLLRLPLSEAVVAEIQLHSFSSIGWGIG 117
           L S+H+   L A GD   G ELQ L +    +Q LR+P+ E VV E+QLHS        G
Sbjct: 1   LTSAHRRDSLNATGD---GCELQLLAALWYHLQFLRVPVPEEVVGEVQLHSLCRTRRWRG 60

Query: 118 FHGCVAVLIIWHEGKECGLVGH 139
           FHG  AVL+  H   E  LVGH
Sbjct: 61  FHGGAAVLLTIHGEPEHRLVGH 79

The following BLAST results are available for this feature:
BLAST of Moc10g03600 vs.
Match NameE-valueIdentityDescription
BLAST of Moc10g03600 vs.
Match NameE-valueIdentityDescription
BLAST of Moc10g03600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1D1ZJZ49.9e-0633.58Uncharacterized protein OS=Anthurium amnicola OX=1678845 GN=g.123597 PE=4 SV=1[more]
C7IY627.1e-0445.12Os02g0695800 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os02... [more]
BLAST of Moc10g03600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g03600.1Moc10g03600.1mRNA