Moc10g02960 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g02960
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionlate embryogenesis abundant protein At5g17165-like
Locationchr10: 2032586 .. 2038561 (-)
RNA-Seq ExpressionMoc10g02960
SyntenyMoc10g02960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACGAACCAGATCTGGACCAGCGATCCACTTCGCAACTCCGCGATCTCTTCCTCTGCTCCCAAGTTCAGGTACTTTTTCTTCTTCTCTTAATTCGTTTTGTTCTTGTGCGAATGTTCGTTTATCTAGATGCTGCTGCTTCTTTTTTTGTTTCGTTATCTTCTGGTAGATAGCTGATTGCATTCTTGTTGCGGAAATTTTCTCTGAAAAGTTGTTCTGTGTTGTTGCATTTCTTCGTCTTCACGCTGATTGCTTTTTTAACGACTTCACACTGACAAATATATCAGATGAACTTCTTCAATATGTGAGATTAGGTTTTCTCTTCCGTCGCTCCCTGCTCTTCTTTTGAACATATGACTTTTCTCGGTTCCTTCTGATTTCGGCTTTAATCTTCTCCAGAAAAGGTTTCAGGATTCTAATTCGTCATCCGATCTTCCGGCCGTATGCTATTTAGCCTATATTTCGCTTAACTCGCTTAGAAAATATATTCTCCATCATTCTATATATGCTTCTTTTTTTTTCTTTGCTTTTTGTTAAAAAAATTTGGAAGTTTTGTCAAATTTTTTTATACAGTGTTTGTTCATTTCATTCACGCTGTTCATAAGTCGATACCGCTTAAGATAACTTGGAATTAGAGAAGGTCAATTCCTATTCCTCTGATAAAATTTGGAGAAGAGGTGGAGGTGATCTGGCGTACGCCTATTTTGTGCTCTTTAGGTAATTGTTTTGATTGCTTTTAGATTATATGACAGCGAAAATTAAAAAGTCATTAATATTAAAATTAAATAACTAATTTATTTTTCTTCATATTTAATTAATTTATTAACTTATTGTACTTAATTTTCATTAATATTATTATTATTTTACTAATTTACTCTACTTGATTTCAAATTCTCTGTTTATTAGAATGATTTTTTAAATTTTACTTAGTAATCTTGCTTTCTGAATTTAGTTACTATTATATGTCTATGTTTAAAAAATTAAACTGAGACATAATAGTACTTTCTGTTATGCAGAAACAAATGACCTCTTATAGAAAGAGTTGTAAAATTTTGGTGAAAAGACTTTGGAGTGCTATACCTATCATATATTCAATGCCTTTTGGCTTTATAATTATTTCAGTTTAATTGTAGCAAAAATTCAACAATATGAAGATTTTAACATTCATTAATTATAATTAACTATGGTTTGAAATATTATTTAATTCGAAAGTCAACATAGTAAAATATTCGAAAGACGAATCTTGAAAATTTGAACCTATATCACAAACAAAAACATTTGATATTCTAAGCTTTTTTTCATTCTTGCTTTAAAAGGTCATTTGAATCTCATACCTATCCCTATCACGGTACTACAAAATTCCAAATGTAGGTTTTTCTTTTCTTTTTTTTTTTTTTTGAAAGAAATAATTCCGAACTTCAAATCCTCCTTTAGTTTTCACACATGTGCAGTAGGATCTTTATTGATGCAGTAGCCAGATTATACACTAAAAGCCTACAAGGTTAAACTCCCTGCATTTCAGTTGTATATTCTCTGTGTAATGGTAGAGCTAAATATCAAAATTCTTAAATTTTTTATGATAAATATCAAATTTTATTATAAGATGGTTCAAAACTTATTTTGCTAATTTCCTTGAGGATAAAGTTTAGTTTATATTAATTAGCCGATTGTTACTCCATTCAACTTTAGACTATTAATTTTTTAAAAAAAGAAAAGTAAGACACGTCTGGTTTGAATCCATATTTATTTGGAAACCTCATAACTTCTTTGTTGACTGGATAATAAAAACATTACTTTGTTTTGTGGACGTTTGGGCCGTCAAATAGTTAGATTGGCGCCATTTGTCCAAATTTGAATTCTTTTTAATTTCAAGATAGTACAAGTTATCAAGTTCTGCTGACTTTAGTAAATATATATACTTAAAAACAAAACTTAATAAATATATATTAGGTGACTTTAGCTCACTCAAACTATTTCCATTCTACATCTTCCTTATTAAATATATTCACATTAAATTACCTTAAAAGAAGTCGCTTGTTTACAAGTTATGTAAATATGATACCTAAATTCCATTTAAAAAAAAGATACCCAAATAGTAAATGTCTATATTTGATATTTTGTGGGTTAATAATTTTAATGTTAATTAATTTGAATTAAGCTTAATAATTAGGTTAATCAATTTTATATCAATTATGCTTATTTATAAATCAAATAAAACAATTAGTCGCCAGATTTCCTGTTAATTACTTGACATAGTTTTGATATTTAAAAAGAAAGAAATAATAATTAATTATTTTAATGATGTATATGGCTATAAACATTAGAGTTAAAAGTTCTAAGTTAATTCAAATAATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCTTTTGTGTCCCCTCCCACGGTGGCTCGGGACGGTTTGACTTTAATAGAAAACAATAGGGCCTGTGATGGGATAGGATAGCCTTAGCTTCACACATCTGGTCTCCTACATCATCCCTATTGAGATATTTTTCATGTACATCCGATACCACGTGGCTTTTTCAAAATCCCACATCTAGTAAACTTAAAGGCCAATATAAACAAACCAAAAAAGATTCAAACGACGATAAGTAGTTATTCGTATTAAAAAATTTATTGTATAGTTAAATATTAATATTGATGAAGTTATATTTTAAAATTAAATGGTAATGAGAGGGTAATTAATTTATAATATAAATTGTTGTTAGGTTTCTTATTTTTTCAATGTGGTATCTTTAACCTCGTAAGTCATAGGTTGTTTGGTTTAGTTTGTTTTGTTGTATTTTCAAAGTTGTTTTTCAAACTAATTTTCTAGAATTGATTTCTGCTCTGATTTTATTTAAAAAATTGTTGAACAATTTTTTTTTTGCTGTGCGCTTTCATTTATTTCTTCTCTGTATTAATTTCAAAATATTACATTTAAATTAAGTACAAAACTGAAAATAATTATAAGTGAATAATTCTGCCTTATGTAACTTCTGTGCATAATTGTGTTTTTCACTTTTTGAAAAGGAAAACTATCTCTGGACTTTATTTTCGAACAATCCATAGGCTTTGTCTTTAGAAAATTTATAATATAAATTTAAAATATTTTAATTATACATTTGTTCACACTTAATCACGCCACTCTTTATTTTTTTACTTTATTTAAAAATCCTGCATAGAATGAAATCATCTGATTTCGCTAAAAATGGGTTGTAATAACATATATAAGAAAAATTCCCCATTTAGAGTAGTGCTGGAATACTTCCTTGTCTATTTTATGTCTGCTGCTTTCATGTCAAAGTGGAACATGTGTAACATAATCAAATTTGTTTGCATCAAGGGAGCTAGCTGGCTCTTATCTTACTTATCCAGTAAGGTCCACTGGTTGATCCCCAGATATATGGGATAGGAATTCGTTGATCACTAGATATCCTACGAAAAATTATTATATATATAAAAGGCTGTTGCATCATAGCTACCTCCTAATAATCAATTGGATTCATGTTAAAAAAATAATATTCAATTCTTAAATAATCATTTGATATAGATTTGAAGTATTGCTAGTTTCCTTCTTATCAACCATATTATGGCAGCTTTCTTCCTTGATTTATGGATATTCCACACTCATCCCTATCAATATTTACAGTGTTTCATCTTAAAACTAAATTTTTGGACTATGCTATCATATCAATATACATAGAAATGAAAGTAGTAATCCATGTTTATTATAAACAATTGTAAGATGCTTTTTCTTGTTAATGTGGGATCCTTGATAATCTCCGTCATTTCTTTCCACAACTTTCTCAAACATCTCTCTCTAGTAAGTCTTCAAAATATCTCTTATTGCCTTCGCTGTATTGAATAAGCATGATTCCTTTTCACGTTAGCTTTGTCTGATAAATTTTGCCTTGGAAGTTAACATCTCTAGACTACTCTTATTTGGTTGAAGTGGGTCCAAATGATGTGATATTTGTCTTGAATTATTGAGAGTGATTGTTACTATTATTGGTTTCTTCTGCAAATTTGTTTATATTTACGGCTCAATACGTCACTTTTTTTTTCTTTTAGGTTTATATACCATTTCTCATAATTTGTGCTTAATGTTTTTTGAAAGTTTGGTTAGCATTCTAATAGTGTCAATATTTTTCAAACGAGTCCTTTTTTAACAATGTTCTTGAAATTTTATTTTTCAAAGAAGAAAATTCTTGAAATTTAACAAAAAGATAGTGGTTTGGTATTTTTAAATACCATTTTCTTTGAATTGATCTGTTTCAAATATTAAATATTTATTTTACACTATTGGATCAAGAAAATTCAATCAACCCTATCCGATCCAAGAGTTAAAAACAAGAAGTGTACTTTTTAACCAATAGTTTCTAGAGCAGGTAAGTGATCAGATTTTTATCATTTAAATAACATTAGCTGAATGGATTCCACGTCGTCATTTCTTTATTTATTCTTAAAGGAAATATTAAACAAAGATCTGATTGGAAACTTTTTATTTTTTAAGAGTAAAACTGAATATTTCATTGATAACAAGATACTTTATAAGCAGTATACATACCAGAAGTTGAACAATATTCTTCTCAAAAAGAGAGAGAAAAATAAAAGGAAGTTGAACAATAATTAACCATATTTAGTTGATATTTAGTGTGCCTTCCAAACAATTTTTAAATATAGATGTTAACAAAAAAGTCAGAGATTCAATGAAAACCTGACTAAAAATATTGTTGTCGTATTAAATAAATTACAAAATTCATGCTCCCCAATCTTAAATCTTAGTGCTTTTATTTATTTATTGGGAAAGGAAATAACTTGAAAAGCATTTTTGATGCGACTTTCATCAAGTTGCTGGGTGGAATACGAACCACCACGTGGTAGGTGGGACTCTGCTGTTTTTATCATTTGGAACTGTTGGTTATTATTGCAATGTCAATCATATTATTATTAAATTATAAAATTAGATCTTATTTTATCCTAAAACTTTATTTGTATTTCGTACTTTAAAACTATTGAAAATTCAGTTTACTCTCTTGATCTTTTAGTATTTTTGTTCAATCTTTAAGAATTACTTTACTCTTTCTTGTTACTTTTATAAACTTAAACCTGTTTTGCTTCGATGTTTTTACTTTTTGAAAAGGGTTTTATTTCAATCTTTAAACTTTATCTATACACTATTTTAGTCCTTTTCATTAATTATTTCTCATAAATGTAAATCCATTTTGGTTTAACTTTCCAATACTCTCGTTTACGCCATCAAGCTTTATTTAAGAATTATTTGTTCTCTGATTAATCTATCAATAATTATTACTCATAAATTTAAATCTATTCTAGAAGCTAAGGCCTGTCTGCTATTATTTATTTATGTATATAATTACACAAGTTAACCAATACACAGGTCTATATTAGGTTTCTTTTTAATAGTTTTTAGAAATAAATCTCAAGAACTAAAAAATTTAAGATTCAAAATAAAATTTAAGTGTTAGGTATGTCATAAAACATCAAAAACCATATATTTACATTGGGTTGCGCCACTATTTTGTTAGTATATCTATATCATATTGTTTTTATTTTATTTTATTTTGTATGGAATATTTATGGGATAGAGAATTGAAACCTGAAACAGGAGGGCTGCCCACACCTCAGTGTATGACAAGAACCCAGACGAGCAAGCTCGGCCAAGCATAGTCCCAGATGAGGTGATTCAGCCTCAACCTGATAAATACTGGGCTCCTCATCCTCAAACCGGCGTCTTTGGGCCGGTCACCGACCACCCTACTGCCGCTGCTGCAAAAGCAGCCAATGGTGGCAGCTACGCGGTGGAGGAGGAGAAGGCTTGGTTCCGACCTACCAGTCTAGAGGATTCCGAGAAGCCCCACGGGCACTAA

mRNA sequence

ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACGAACCAGATCTGGACCAGCGATCCACTTCGCAACTCCGCGATCTCTTCCTCTGCTCCCAAGTTCAGGAGGGCTGCCCACACCTCAGTGTATGACAAGAACCCAGACGAGCAAGCTCGGCCAAGCATAGTCCCAGATGAGGTGATTCAGCCTCAACCTGATAAATACTGGGCTCCTCATCCTCAAACCGGCGTCTTTGGGCCGGTCACCGACCACCCTACTGCCGCTGCTGCAAAAGCAGCCAATGGTGGCAGCTACGCGGTGGAGGAGGAGAAGGCTTGGTTCCGACCTACCAGTCTAGAGGATTCCGAGAAGCCCCACGGGCACTAA

Coding sequence (CDS)

ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACGAACCAGATCTGGACCAGCGATCCACTTCGCAACTCCGCGATCTCTTCCTCTGCTCCCAAGTTCAGGAGGGCTGCCCACACCTCAGTGTATGACAAGAACCCAGACGAGCAAGCTCGGCCAAGCATAGTCCCAGATGAGGTGATTCAGCCTCAACCTGATAAATACTGGGCTCCTCATCCTCAAACCGGCGTCTTTGGGCCGGTCACCGACCACCCTACTGCCGCTGCTGCAAAAGCAGCCAATGGTGGCAGCTACGCGGTGGAGGAGGAGAAGGCTTGGTTCCGACCTACCAGTCTAGAGGATTCCGAGAAGCCCCACGGGCACTAA

Protein sequence

MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPSIVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLEDSEKPHGH
Homology
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BLAST of Moc10g02960 vs. NCBI nr
Match: XP_022140901.1 (late embryogenesis abundant protein At5g17165-like [Momordica charantia])

HSP 1 Score: 258.5 bits (659), Expect = 3.1e-65
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60

Query: 61  IVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLED 120
           IVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLED
Sbjct: 61  IVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLED 120

Query: 121 SEKPHGH 128
           SEKPHGH
Sbjct: 121 SEKPHGH 127

[Close]
BLAST of Moc10g02960 vs. NCBI nr
Match: XP_038901450.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida])

HSP 1 Score: 211.8 bits (538), Expect = 3.3e-51
Identity = 109/129 (84.50%), Postives = 117/129 (90.70%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAANSRSAG IAGLGKRIT+QIWTSDPLRNS ISSSAPK RRAAHTS YDKNPDEQ RPS
Sbjct: 1   MAANSRSAGVIAGLGKRITDQIWTSDPLRNSVISSSAPKIRRAAHTSAYDKNPDEQVRPS 60

Query: 61  IVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAAA-KAANGGSY-AVEEEKAWFRPTS 120
           +VPD+VIQ Q  DKYWAPHPQTGVFGP +D+P AAAA +AA+GG+Y AVEEEKAWFRPTS
Sbjct: 61  VVPDDVIQSQAADKYWAPHPQTGVFGPASDNPAAAAANRAADGGNYSAVEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 127
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 129

[Close]
BLAST of Moc10g02960 vs. NCBI nr
Match: XP_004146886.1 (late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hypothetical protein Csa_014444 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 5.7e-51
Identity = 109/132 (82.58%), Postives = 117/132 (88.64%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAANSRS GAIAGLGKRIT+QIWT DPLRNS ISSSAPKFRRAAHTSVYDKNP+EQ RPS
Sbjct: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60

Query: 61  IVPDEVIQPQ--PDKYWAPHPQTGVFGPVTDHPTAAAA---KAANGGSY-AVEEEKAWFR 120
           IVPD+VIQPQ   D YWAPHPQTGVFGP +D+P A AA   +AA+GG+Y AVEEEKAWFR
Sbjct: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120

Query: 121 PTSLEDSEKPHG 127
           PTSLEDSEKPHG
Sbjct: 121 PTSLEDSEKPHG 132

[Close]
BLAST of Moc10g02960 vs. NCBI nr
Match: XP_008453829.1 (PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 5.3e-49
Identity = 109/131 (83.21%), Postives = 117/131 (89.31%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWT-SDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARP 60
           MAANSRSAGAIAGLGKRIT+QIWT SD LRNS ISSSAPKFRRAAHTSVYDKNP+EQ RP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 61  SIVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAAA--KAANGGSY-AVEEEKAWFRP 120
           SIVPD+VIQPQ  DKYWAPHPQTGVFGP +D+P A AA  +AA+ G+Y A EEEKAWFRP
Sbjct: 61  SIVPDDVIQPQAADKYWAPHPQTGVFGPTSDNPAAVAAANRAADVGNYSAAEEEKAWFRP 120

Query: 121 TSLEDSEKPHG 127
           TSLEDSEKPHG
Sbjct: 121 TSLEDSEKPHG 131

[Close]
BLAST of Moc10g02960 vs. NCBI nr
Match: KAG6576842.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.1 bits (518), Expect = 7.0e-49
Identity = 107/129 (82.95%), Postives = 113/129 (87.60%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAANSRSAGAIAGL KRIT+QIW  DPLRNSAISS+APKFRRAAHTS YDKN DEQ RPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  IVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAAAK-AANGGSYA-VEEEKAWFRPTS 120
           IVPD+VIQPQ  DKYWAPHPQTGVFGP T +P AA A   ANGG+Y+ VEEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPHPQTGVFGPATINPVAAVANHTANGGNYSIVEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 127
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 129

[Close]
BLAST of Moc10g02960 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-20
Identity = 60/125 (48.00%), Postives = 78/125 (62.40%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAA S++   I  +G+ I N +      R+ A++      R   HTS YDKN +E+ +PS
Sbjct: 1   MAAKSKN---IQVVGRHIVNGV------RSRAVAYGLFTSRN-DHTSAYDKNVEEELQPS 60

Query: 61  IVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLED 120
            VPDE+I+P  DKYW+PHPQTGVFGP +   T A  +   G   +V EEKAWFRPTSLED
Sbjct: 61  QVPDEMIKPDSDKYWSPHPQTGVFGP-SSSSTNAKDEFRGGQEDSVMEEKAWFRPTSLED 114

Query: 121 SEKPH 126
            +K H
Sbjct: 121 LDKTH 114

[Close]
BLAST of Moc10g02960 vs. ExPASy TrEMBL
Match: A0A6J1CHE9 (late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=3673 GN=LOC111011456 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60

Query: 61  IVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLED 120
           IVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLED
Sbjct: 61  IVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLED 120

Query: 121 SEKPHGH 128
           SEKPHGH
Sbjct: 121 SEKPHGH 127

[Close]
BLAST of Moc10g02960 vs. ExPASy TrEMBL
Match: A0A1S3BYE5 (uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49
Identity = 109/131 (83.21%), Postives = 117/131 (89.31%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWT-SDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARP 60
           MAANSRSAGAIAGLGKRIT+QIWT SD LRNS ISSSAPKFRRAAHTSVYDKNP+EQ RP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 61  SIVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAAA--KAANGGSY-AVEEEKAWFRP 120
           SIVPD+VIQPQ  DKYWAPHPQTGVFGP +D+P A AA  +AA+ G+Y A EEEKAWFRP
Sbjct: 61  SIVPDDVIQPQAADKYWAPHPQTGVFGPTSDNPAAVAAANRAADVGNYSAAEEEKAWFRP 120

Query: 121 TSLEDSEKPHG 127
           TSLEDSEKPHG
Sbjct: 121 TSLEDSEKPHG 131

[Close]
BLAST of Moc10g02960 vs. ExPASy TrEMBL
Match: A0A6J1JAZ8 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111482838 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.4e-49
Identity = 107/129 (82.95%), Postives = 114/129 (88.37%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAANSRSAGAIAGL KRIT+QIWT DPLRNSAISS+APKFRRAAHTS YDKN DEQ RPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  IVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAAAK-AANGGSYA-VEEEKAWFRPTS 120
           IVPD+VIQPQ  DKYWAPHPQTGVFGP T +P AA A   A+GG+Y+ VEEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPHPQTGVFGPATINPMAAVANHTADGGNYSIVEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 127
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 129

[Close]
BLAST of Moc10g02960 vs. ExPASy TrEMBL
Match: A0A6J1E3E9 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111430463 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.4e-48
Identity = 105/129 (81.40%), Postives = 113/129 (87.60%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAANSRSAGAIAGL KRIT+QIW  DPLRNSAISS+APKFRRAAH+S YDKN DEQ RPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHSSTYDKNHDEQVRPS 60

Query: 61  IVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAAAK-AANGGSYA-VEEEKAWFRPTS 120
           IVPD+VIQPQ  DKYWAP+PQTGVFGP T +P AA A   ANGG+Y+ VEEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPNPQTGVFGPATINPVAAVANHTANGGNYSIVEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 127
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 129

[Close]
BLAST of Moc10g02960 vs. ExPASy TrEMBL
Match: A0A6J1FNH5 (late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447057 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.4e-47
Identity = 106/129 (82.17%), Postives = 113/129 (87.60%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAANSRSAGAIAGLGKRITNQIWTSD    SAISSSA KFRRAAHTS YDKNPDEQ RPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSD----SAISSSALKFRRAAHTSAYDKNPDEQVRPS 60

Query: 61  IVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAA-AKAANGGSY-AVEEEKAWFRPTS 120
           IVPD+VIQPQ  +KYWAPHP TGVFGP  D PTAAA ++AA+GG++ A EEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQAAEKYWAPHPHTGVFGPEADQPTAAAGSRAADGGNHAAAEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 127
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 125

[Close]
BLAST of Moc10g02960 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-21
Identity = 58/121 (47.93%), Postives = 72/121 (59.50%), Query Frame = 0 

Query: 5   SRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPSIVPD 64
           S+S   I  L K + N           A +S+    RR+ H+S YDKN +++   S VPD
Sbjct: 6   SKSFQLITSLRKHLVN-----TRASTRATASALFPSRRSGHSSAYDKNVEDELHASAVPD 65

Query: 65  EVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLEDSEKP 124
           EVI+P  DKYW+PHP+TGVFGP T   +A A  A      AV EE AWFRPTSLEDS+K 
Sbjct: 66  EVIKPDSDKYWSPHPKTGVFGPSTTEHSATAEGAHQ--DTAVLEETAWFRPTSLEDSDKT 119

Query: 125 H 126
           H
Sbjct: 126 H 119

[Close]
BLAST of Moc10g02960 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-21
Identity = 60/125 (48.00%), Postives = 78/125 (62.40%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60
           MAA S++   I  +G+ I N +      R+ A++      R   HTS YDKN +E+ +PS
Sbjct: 1   MAAKSKN---IQVVGRHIVNGV------RSRAVAYGLFTSRN-DHTSAYDKNVEEELQPS 60

Query: 61  IVPDEVIQPQPDKYWAPHPQTGVFGPVTDHPTAAAAKAANGGSYAVEEEKAWFRPTSLED 120
            VPDE+I+P  DKYW+PHPQTGVFGP +   T A  +   G   +V EEKAWFRPTSLED
Sbjct: 61  QVPDEMIKPDSDKYWSPHPQTGVFGP-SSSSTNAKDEFRGGQEDSVMEEKAWFRPTSLED 114

Query: 121 SEKPH 126
            +K H
Sbjct: 121 LDKTH 114

The following BLAST results are available for this feature:
BLAST of Moc10g02960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022140901.13.1e-65100.00late embryogenesis abundant protein At5g17165-like [Momordica charantia][more]
XP_038901450.13.3e-5184.50late embryogenesis abundant protein At5g17165-like [Benincasa hispida][more]
XP_004146886.15.7e-5182.58late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hy... [more]
XP_008453829.15.3e-4983.21PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo][more]
KAG6576842.17.0e-4982.95Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro... [more]
BLAST of Moc10g02960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4KFM85.4e-2048.00Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Moc10g02960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CHE91.5e-65100.00late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=367... [more]
A0A1S3BYE52.6e-4983.21uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=... [more]
A0A6J1JAZ84.4e-4982.95late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1E3E96.4e-4881.40late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1FNH55.4e-4782.17late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita mosch... [more]
BLAST of Moc10g02960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03150.12.2e-2147.93unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G17165.13.8e-2148.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..89
NoneNo IPR availablePANTHERPTHR35122:SF2OSJNBA0093F12.14 PROTEINcoord: 1..125
IPR039291Late embryogenesis abundant protein At5g17165-likePANTHERPTHR35122OSJNBA0093F12.14 PROTEINcoord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g02960.1Moc10g02960.1mRNA