Moc10g02050 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g02050
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Locationchr10: 1321028 .. 1326375 (+)
RNA-Seq ExpressionMoc10g02050
SyntenyMoc10g02050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATGTCGGATGAGCAAGATATGCGGAAGATGGGGGGGCTTGATAGAGGGGGATGGAGGAAGTGGACAAAACAGACTTGCGCCAGTCTCGACTCGACCTGGAGAGAACACAGGGTAAGGGCTTGGCCCATGAAAATTGCAAACCCAGTGGCAAAAGACCCATCCACTCTCATCATCCCAACCGAAGAAAGAAACAAGCGGTGGCCTTGGGGACAATTTTTCTCTTAATTGCGTAGGAATATGAACAAAACACGTGCATCTAAACACTCGCTAATTAACTAACAATACATTAAGTTTGACGATAAATTTACATTATCTTTTAACCCAAGCTTTTAATATGATTAAATGTTTGTTTCAAAAATATATATATAAGTAAATTTTATATTAAATTTATTAATGTAATATTTTATATTAAATTTATTAATGTAATATTTTATATTAAATTTATTAATGTAATATTAATTATACTTTAAAGATATGAATTCTCGTCTCAATAAATAAATTTACTTGTCAAAGCAAACATATCTCCCACCAAGAAGAATTGTGAGTTCGATCCCTCACCTCCACACATTGTACTAAAATAATAATAGTAATAATAATAAATAAATAAATAAATTTACTTATTGAATGTTTCAAGATATCGAGCCTCGTGTATGTGTAGTTTTTTCAAAGAGACTGAAAAACTACTACAAAAATTAATCATTTTTATAATATAAATTCTATTGTTATGGAGAACAAAAACGACCCGAAACGGGACAAGAAGTTGAAGTCTGAGATCATTGATTGGGGGAGACCGACCCGTGACGTAATGGGCCAGCCCAAAGAACGACCTAACACCGGGGCAGAGAACGAGGAAAGCAACTGGTCCCGACCTCTGCTCGGTCCCGACCACTTCTCGGTCCCGACCACTTCTCGGTCCCGACCCCTGCTCGGCCCACGGCCCAGCCCATGAATCTTCCGCCTACGATCTACGATCCCTCGGGCCCTGCAAAGCCGAATTAGGGTTTGGCTACGAAGGTTATGGAATCATCTTCACGGCTATAAGTAGCAGTGAGATCCACCCCTGAAGGGTAAGGGACTCATCCCTAGCTAACTATTTTCTCAACTCTCCCTCGCTAACTTAAGCATCGGAGCCCGTGTGACTAAGGTCACACCAATTTAGATCGGTTTGATTTTGCAAGTATCGGTTCCCTTATCATCGAGTTAGGTGTGTGCGAGAAGAAGATCCGGAGGGTCAAAATCCATGCATCAACAATTGGCGCCGTCTGTGGGAACGATACAGTAAAGCAAGCTTCGTTGAAGCGAAATCCCGATACGAGGCGAAATTTCGATCCGAGGCGTGTAGAGTGAAACAACCGATCATTCGGGTGAGGCAAGACCGAGCCCTGATCATCGTCTTAATCCGACCACCCTTGACAGGGGAGAACCAGATCGAGCCTGAATGAAGCGACAGACCTCTCGGGTGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGAGAACCAGTGACGAGCCTGAATGAAGCGACCGACCTCTCGAGTGAGGTAACGCCGAGCCCTGGTCATCAACTTAATTCGACCACCCTTGACAGGGGAGAACCAGTGACGAGCCTGAATGAAGCGACCGACCTCTCGGGTGAGGTAACGCCGAGCCCTGGTCATCAACTTAATTCGACCACCCTTGACAAGGGAGAACCGGCTGAGGCGGTAGAATCTGTCCCTCAGACAGCTGAACATCGACGGGTCAACATCAGAACCAGGTTGGGGGATGAGGAAAGAAAAAGCCTTATAAACTTCCTCAGAAGCAACGCCGACGTGTTCGCATGGTCGCCGGAGGACGTGCCGGGAATCGAGCGAGGAGTCAATGTCGACTCAATGTCGACGAGAGCTGTAAGCCAGTGAAACAGAAGCGTCGCGCGTTCAACCAAGAAAGGAACGAGATTGTAGCTGAACAGGTGGAAGAGCTACTGAAAGCAGGCTTCATTCGGGAAGTACATTATCCCTAGTGGATATCCAACGTAGTGCTGGTAAAGAAACCAAACGGCAAATGGAGAATGTGCATCGACTTCACGGACCTGAATAAGGCCTGTCCAAAGGATTTTTTTCCTTTGCCTCGAATATATCAACTGGTTGATGCCACTGTAGGACATGAAAGATTGAGTTTCATGAACTCCCTTCAATATCCATTAACTTGGTTCCCTACCAACTCTGTTTTCTAAATCCAAAACTGGATGCCAAGCGACTTTGATAAAACACCTTGCCTCGTCTATAAACATACTCTCAAAGGATATCGACAATACACTACCTTGAGAGTAGGGGGCAATAGGTCATGACCGACTCAACGACGCAAGCTTGGTAGAACCAGCCCAAGCCGAGCAGGCCGAGCAGGGCTCGGGTCCGACCTAGCCTAGCACATCTCTGCTCGGATCCGACCACTGCTCGGCGTCGACCAGGTGCAATGAGGCACAAATCTACATTAATCGACAGATTTTGAAAGCAGAATCTACATTAATCGACAAATTTGGCAAGAACAATTAAACAATCTCAACACGGCCAAACCAGAAGCGGGTCGATTGTCCTAGCACAGTTAAAACATGAGATGGAGTAAAAATGACAACGGGTATAAAACTAGTGGCTATGGCCAAAGGGTTAGAAACCTATGAAAATAAAAGCAACAAAGTCAACTCCATCAACGAAGCTGAATATGAAGCTCTACTAGTAGGATTAAAAGTGGCCAGGTACGTTGGGGTCAGGAACATACTGATACTAAGTGATTCACAGCTGGTTGTAGGTCAAGTGAAAGAGAAGTTCAGGCTAGAGAACCGCGAATGGCGAAATACCTTTCACAGGTAAAAAACCAGCTATACCAATTCTCAAAATATGAGATTCGACAAATTCCACGTGCTCAAAACGTCAACGCCGATGCGTTAGCTCGACTAGCTGCAGCTTATGAAACCGACTTAGGCAGAACTGTACTGGTCGAGATTCTACCCGAGCCAAGCATAGAAGCTCAGGAAGCAATGGATATCGACGAGCAAGGGCAACCAGAAGAAAATTGGAAGAGCCCTTTGATCAAATATTTGAAAGACGGGATCCTGCCTACTGAAAAGATAGAGGCCCAGCAGCTACAACGACGAGCAGCCAGATATGTGCTTAAAGACGACAATCTGTACAAAAGAGGTTACTCGTTGCCGCTTTTAAAATGTCTAACGCCCGACGAAGCTCACTACGTCATGAAAGAGATACATGAGGGTGTTTGTGGGAGCCATTCTGGAGCATGATCCCTAAGTCACAAAATAGTTTGACTAGGGTACTACTGACCGACCATGCTGAACGACACGAAGCGATTCACCAAAAAATGCGACAAATGCCAACAGTTTGCAACAGTACCTAGACAACCGCCATAGCCACTAAACAAGCATAATGAGTCCTTGGCCCTTTGCTCAGTGGGGAATAGACCTTATGGGCCTCTCCCACTCGAAAAAGGGTCAGACCAAATTTGCAGTAGTTGAAGTCGACTATTTTACTAAATGGGCCGAAGCCAAAGCCCTAGCGACAATTGCTGAGAAAAAGGTCACCGACTTCATTTGGAAGAACATAATTTGTCGCTTCGGAATACCCTACACCATTATCAGTGATAATGAGAAGCAGTTCGACAATGCTGCCTTTCGAGAATTTTGCAGAGAGTTAGACATTAAGCACATTTGTTCCTCGCCAGCACATCCGCAGGCTAATGGGCAGGTTGAAGCAGTCAACAAAATCATCAAAAGAACTCTGAAGACCAAATTAGAAAAGCTCCAAGGGTTGTGGGCAGAGGAACTTTCCAACGCATTATGGGTCTACAGAACAACACCTTGTACTCCGACAGGAGAAACGCCATTTTCACTATCATTTGGCTCTGAATCTGTAGTGCCAGTCGAAATTGGACTCCCCTCCCCAAGTGTAGAGCAGTTCAATCTACTTGACAACAACGAATCCGTACAGCTCAACCTCGACCTATTAAAAGAACATCGAGAAACAGCACGGCTACGAACGGCTGAATACAAAAATCGAATAGCTCGATACTACAACTCGAAGGTTATTGTAACTAAATCTTCGACAGGACAATCTTCCTACTAATAAAGTCTTCGACATTTAACGCGATACTTGAGTTTTTATGTTCATTCTGAAATAAATTTCTCAAGCAGGGGACATCATATGAATATCTACATTTCTACGACCTGAATATCTACATATCTATGACCAATCAAGAAACTCAAAATTGGGACGGACCTAGAAGTAGGCCGATAAGCTAAAAGCCAATCAGTGAAACCAGGGAAAAGAATCCCGAGGTGCTGAAAAAGGCATGCGTACAGGCCCAGCAAGGTCAAAACAGAAAACAGGCAAGCCTAACCGATCAACGAAACCCACGGGTAGAAAATCATATGGCAAAAGCCAAAATAGGTTAAAAACCCGAGGGTGTTGATTTAACTTGGGGTAAAAAGCTGGCAGAAGCCAAATATGTTAGAAACCTAAGGGTGCCGACTAAACTCAGGGTATAAAAGCCATTGGCAAAAGCCAAGTGGGTTAGAAACCCGAGAGTAAACCTTGAGGTATAAAACATGGGCAAAAGCCAAATAGGTTAGAAACCCAAAGGTATCGACATTAGTTCTGTTAAAGTTAGATCCCAAGGCGAAAGGTAAATGGTTTAAACTCAGATGAGAATAAAACCAGGCTCAGGAGACTTGATTGTGGTCAACGAAAATTGGAAAAAACTTCCAATTCATGAATAATATCGACAAGTTCAAGACACAAAACTAGTGGCAGGAACCAAGCACTAAAATCCAAAATTGGATCAAAAGCTTTTGGTAGAAACCCTGTGCGTTAGCAACCTTCACAGTTTTAGCCACTAATATATAATGATCTCGTGGTAACGACAAGCGACAAGTAATCTCAAAACAAAGATCTTTACACAATTATTCGTCTTCTGTTTTGAGAGTGGGGGTCATTGTTATGGAGAACAAAAACGACCCGAAACGGGACAAGGAGTTGAAGCCTGAGATCATTGATTGGGGGAGACCGACCCGTGACGTAATGAGCCGGCCCAAAGAACGACCTAACGCCGGGGCAGAGAACGAGGAAAGCGACTGGCGAAAAACTAACCAGGCCGAGAGGGCTCGGTCCCGACCACTTCTCGGTCCCGACCCCTGCTCGGCCCACGGCCCAGCCCATGAATCTCCCGCCTACGATCTACGATCCCTCGGGCCCTGCAGAGCCGAATTAGGGTTTGGCTACGAAGGTTCTGGAATCATCTTCACGGCTATAAGTAGCAGTGAGATCCACCCGTGA

mRNA sequence

ATGCCATGTCGGATGAGCAAGATATGCGGAAGATGGGGGGGCTTGATAGAGGGGGATGGAGGAAGTGGACAAAACAGACTTGCGCCAGTCTCGACTCGACCTGGAGAGAACACAGGCCCAAAGAACGACCTAACACCGGGGCAGAGAACGAGGAAAGCAACTGGTCCCGACCTCTGCTCGGTCCCGACCACTTCTCGGTCCCGACCACTTCTCGGTCCCGACCCCTGCTCGGCCCACGGCCCAGCCCATGAATCTTCCGCCTACGATCTACGATCCCTCGGGCCCTGCAAAGCCGAATTAGGGTTTGGCTACGAAGGTTATGGAATCATCTTCACGGCTATAAGTAGCAGTGTGTGCGAGAAGAAGATCCGGAGGGTCAAAATCCATGCATCAACAATTGGCGCCGTCTGTGGGAACGATACAGTAAAGCAAGCTTCGTTGAAGCGAAATCCCGATACGAGGCGAAATTTCGATCCGAGGCGTGGGAGAACCAGATCGAGCCTGAATGAAGCGACAGACCTCTCGGGTGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGAGAACCAGTGACGAGCCTGAATGAAGCGACCGACCTCTCGAGTGAGGTAACGCCGAGCCCTGGTCATCAACTTAATTCGACCACCCTTGACAGGGGAGAACCAGTGACGAGCCTGAATGAAGCGACCGACCTCTCGGGTGAGGTAACGCCGAGCCCTGGTCATCAACTTAATTCGACCACCCTTGACAAGGGAGAACCGGCTGAGGCGGTAGAATCTGTCCCTCAGACAGCTGAACATCGACGGGTCAACATCAGAACCAGGTCAAGTGAAAGAGAAGTTCAGGCTAGAGAACCGCGAATGGCGAAATACCTTTCACAGGTAAAAAACCAGCTATACCAATTCTCAAAATATGAGATTCGACAAATTCCACGTGCTCAAAACGTCAACGCCGATGCGTTAGCTCGACTAGCTGCAGCTTATGAAACCGACTTAGGCAGAACTGTACTGGTCGAGATTCTACCCGAGCCAAGCATAGAAGCTCAGGAAGCAATGGATATCGACGAGCAAGGGCAACCAGAAGAAAATTGGAAGAGCCCTTTGATCAAATATTTGAAAGACGGGATCCTGCCTACTGAAAAGATAGAGGCCCAGCAGCTACAACGACGAGCAGCCAGATATGTGCTTAAAGACGACAATCTAGTGGGGGTCATTGTTATGGAGAACAAAAACGACCCGAAACGGGACAAGGAGTTGAAGCCTGAGATCATTGATTGGGGGAGACCGACCCGTGACGTAATGAGCCGGCCCAAAGAACGACCTAACGCCGGGGCAGAGAACGAGGAAAGCGACTGGCGAAAAACTAACCAGGCCGAGAGGGCTCGGTCCCGACCACTTCTCGGTCCCGACCCCTGCTCGGCCCACGGCCCAGCCCATGAATCTCCCGCCTACGATCTACGATCCCTCGGGCCCTGCAGAGCCGAATTAGGGTTTGGCTACGAAGGTTCTGGAATCATCTTCACGGCTATAAGTAGCAGTGAGATCCACCCGTGA

Coding sequence (CDS)

ATGCCATGTCGGATGAGCAAGATATGCGGAAGATGGGGGGGCTTGATAGAGGGGGATGGAGGAAGTGGACAAAACAGACTTGCGCCAGTCTCGACTCGACCTGGAGAGAACACAGGCCCAAAGAACGACCTAACACCGGGGCAGAGAACGAGGAAAGCAACTGGTCCCGACCTCTGCTCGGTCCCGACCACTTCTCGGTCCCGACCACTTCTCGGTCCCGACCCCTGCTCGGCCCACGGCCCAGCCCATGAATCTTCCGCCTACGATCTACGATCCCTCGGGCCCTGCAAAGCCGAATTAGGGTTTGGCTACGAAGGTTATGGAATCATCTTCACGGCTATAAGTAGCAGTGTGTGCGAGAAGAAGATCCGGAGGGTCAAAATCCATGCATCAACAATTGGCGCCGTCTGTGGGAACGATACAGTAAAGCAAGCTTCGTTGAAGCGAAATCCCGATACGAGGCGAAATTTCGATCCGAGGCGTGGGAGAACCAGATCGAGCCTGAATGAAGCGACAGACCTCTCGGGTGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGAGAACCAGTGACGAGCCTGAATGAAGCGACCGACCTCTCGAGTGAGGTAACGCCGAGCCCTGGTCATCAACTTAATTCGACCACCCTTGACAGGGGAGAACCAGTGACGAGCCTGAATGAAGCGACCGACCTCTCGGGTGAGGTAACGCCGAGCCCTGGTCATCAACTTAATTCGACCACCCTTGACAAGGGAGAACCGGCTGAGGCGGTAGAATCTGTCCCTCAGACAGCTGAACATCGACGGGTCAACATCAGAACCAGGTCAAGTGAAAGAGAAGTTCAGGCTAGAGAACCGCGAATGGCGAAATACCTTTCACAGGTAAAAAACCAGCTATACCAATTCTCAAAATATGAGATTCGACAAATTCCACGTGCTCAAAACGTCAACGCCGATGCGTTAGCTCGACTAGCTGCAGCTTATGAAACCGACTTAGGCAGAACTGTACTGGTCGAGATTCTACCCGAGCCAAGCATAGAAGCTCAGGAAGCAATGGATATCGACGAGCAAGGGCAACCAGAAGAAAATTGGAAGAGCCCTTTGATCAAATATTTGAAAGACGGGATCCTGCCTACTGAAAAGATAGAGGCCCAGCAGCTACAACGACGAGCAGCCAGATATGTGCTTAAAGACGACAATCTAGTGGGGGTCATTGTTATGGAGAACAAAAACGACCCGAAACGGGACAAGGAGTTGAAGCCTGAGATCATTGATTGGGGGAGACCGACCCGTGACGTAATGAGCCGGCCCAAAGAACGACCTAACGCCGGGGCAGAGAACGAGGAAAGCGACTGGCGAAAAACTAACCAGGCCGAGAGGGCTCGGTCCCGACCACTTCTCGGTCCCGACCCCTGCTCGGCCCACGGCCCAGCCCATGAATCTCCCGCCTACGATCTACGATCCCTCGGGCCCTGCAGAGCCGAATTAGGGTTTGGCTACGAAGGTTCTGGAATCATCTTCACGGCTATAAGTAGCAGTGAGATCCACCCGTGA

Protein sequence

MPCRMSKICGRWGGLIEGDGGSGQNRLAPVSTRPGENTGPKNDLTPGQRTRKATGPDLCSVPTTSRSRPLLGPDPCSAHGPAHESSAYDLRSLGPCKAELGFGYEGYGIIFTAISSSVCEKKIRRVKIHASTIGAVCGNDTVKQASLKRNPDTRRNFDPRRGRTRSSLNEATDLSGEARPSPGHRLNSTTLDRGEPVTSLNEATDLSSEVTPSPGHQLNSTTLDRGEPVTSLNEATDLSGEVTPSPGHQLNSTTLDKGEPAEAVESVPQTAEHRRVNIRTRSSEREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVLVEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLKDDNLVGVIVMENKNDPKRDKELKPEIIDWGRPTRDVMSRPKERPNAGAENEESDWRKTNQAERARSRPLLGPDPCSAHGPAHESPAYDLRSLGPCRAELGFGYEGSGIIFTAISSSEIHP
Homology
[Close]
BLAST of Moc10g02050 vs. NCBI nr
Match: XP_022156571.1 (uncharacterized protein LOC111023448 [Momordica charantia])

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-50
Identity = 112/124 (90.32%), Postives = 115/124 (92.74%), Query Frame = 0 

Query: 284 EREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVL 343
           + E QAREPRMAKYLSQV+NQL QFSKYEI QIPRAQNV+ADALARLAA YETDLGRTV 
Sbjct: 728 KEEFQAREPRMAKYLSQVRNQLDQFSKYEIXQIPRAQNVBADALARLAAXYETDLGRTVP 787

Query: 344 VEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 403
           VEILPEPSIEAQEAMDID QGQ EEN KSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK
Sbjct: 788 VEILPEPSIEAQEAMDIDNQGQXEENXKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 847

Query: 404 DDNL 408
           DDNL
Sbjct: 848 DDNL 851

[Close]
BLAST of Moc10g02050 vs. NCBI nr
Match: XP_022156571.1 (uncharacterized protein LOC111023448 [Momordica charantia])

HSP 1 Score: 147.5 bits (371), Expect = 3.2e-31
Identity = 86/139 (61.87%), Postives = 100/139 (71.94%), Query Frame = 0 

Query: 150 NPDTRRNFDPRRGRTRSSLNEATDLSGEARPSPGHRLNSTTLDRGEPVTSLNEATDLSSE 209
           NPD     +  R     SL +A D   EARPSP  +LN TTLD GEPV+ LN+ATDLS +
Sbjct: 2   NPD-----ESHRCFEEKSLKKAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGK 61

Query: 210 VTPSPGHQLNSTTLDRGEPVTSLNEATDLSGEVTPSPGHQLNSTTLDKGEPAEAVESVPQ 269
             PSPG++LN TTLD+G PV  L +ATDLSG+  PSPGH+LNSTTLD+GEPAE VESVP 
Sbjct: 62  ARPSPGYRLNPTTLDKGGPVAGLIKATDLSGDARPSPGHRLNSTTLDRGEPAEEVESVPL 121

Query: 270 TAEHRRVNIRTR--SSERE 287
           TAE RRVNI T+  S ERE
Sbjct: 122 TAEDRRVNIGTKLGSEERE 135


HSP 2 Score: 211.1 bits (536), Expect = 2.3e-50
Identity = 111/124 (89.52%), Postives = 114/124 (91.94%), Query Frame = 0 

Query: 284 EREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVL 343
           + + QARE RMAKYLSQV+NQL QFSKYEIRQIP AQNVNAD LARLA AYETDLGRTV 
Sbjct: 391 KEKFQARELRMAKYLSQVRNQLDQFSKYEIRQIPHAQNVNADVLARLAVAYETDLGRTVP 450

Query: 344 VEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 403
           VEILP PSIEAQEAMDID QGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK
Sbjct: 451 VEILPGPSIEAQEAMDIDNQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 510

Query: 404 DDNL 408
           DDNL
Sbjct: 511 DDNL 514

[Close]
BLAST of Moc10g02050 vs. NCBI nr
Match: XP_022154103.1 (uncharacterized protein LOC111021439 [Momordica charantia])

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-48
Identity = 109/124 (87.90%), Postives = 113/124 (91.13%), Query Frame = 0 

Query: 284 EREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVL 343
           + E QARE RM KYLSQV+NQL QFSKYEIRQIPRAQNVNADALARLA  YETDLGRTV 
Sbjct: 184 KEEFQARESRMTKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLATTYETDLGRTVP 243

Query: 344 VEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 403
           VEIL  PSIEAQEAMDID+QGQPEENWKS LIKYLKDGILPTEKIEAQQLQ+RAARYVLK
Sbjct: 244 VEILLGPSIEAQEAMDIDDQGQPEENWKSLLIKYLKDGILPTEKIEAQQLQQRAARYVLK 303

Query: 404 DDNL 408
           DDNL
Sbjct: 304 DDNL 307

[Close]
BLAST of Moc10g02050 vs. NCBI nr
Match: XP_022159204.1 (uncharacterized protein LOC111025623 [Momordica charantia])

HSP 1 Score: 184.5 bits (467), Expect = 2.4e-42
Identity = 99/124 (79.84%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 284 EREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVL 343
           + E QAREPRMAKYLS+VK+QL QFSK+EIRQIP  QNVNADALARLAAAY TDLGRT+ 
Sbjct: 331 KEEFQAREPRMAKYLSRVKDQLGQFSKFEIRQIPCTQNVNADALARLAAAYGTDLGRTIS 390

Query: 344 VEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 403
           VEIL EPSI+AQE MDIDEQ Q EENW S LIKYLKDGILP E IE QQLQR+AARYVLK
Sbjct: 391 VEILLEPSIKAQEKMDIDEQRQSEENWMSHLIKYLKDGILPDEMIEGQQLQRQAARYVLK 450

Query: 404 DDNL 408
           D++L
Sbjct: 451 DESL 454

[Close]
BLAST of Moc10g02050 vs. NCBI nr
Match: XP_022156048.1 (uncharacterized protein LOC111023016 [Momordica charantia])

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-37
Identity = 127/350 (36.29%), Postives = 174/350 (49.71%), Query Frame = 0 

Query: 226 GEPVTSLNEATDLSGEVTPSPGHQLNSTTLDKGEPAEAVESVPQTAEHRRVNIRTRSSER 285
           GEPVT LN+ATDLSGE  PSPGH+LNSTTLD+G  AE VESVP T E +RVNI T+    
Sbjct: 33  GEPVTGLNKATDLSGEARPSPGHRLNSTTLDRGGSAEEVESVPLTVEEQRVNIGTKLGNE 92

Query: 286 EVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPR---AQNVNADALAR------------- 345
           E ++    +  +L +    ++ +S  ++ +I R      +N D   +             
Sbjct: 93  ERES----LINFL-RSNADVFAWSPEDMPRIDRGVMVHRLNVDESCKPVKQKRRAFNQER 152

Query: 346 --LAAAYETDLGRTVLVE------------ILPEPSIEAQEAMDIDEQGQ--PEENWKSP 405
             + A +  +L +T  +             ++ +P+ + +  +D  +  +  P++ +  P
Sbjct: 153 NEIVAEHVNELLKTGFIREVHYPQWISNVVLVKKPNGKWRMCIDFTDLNKVCPKDYFPLP 212

Query: 406 LIKYLKDG-----------------------------------------ILPTEKIEAQQ 465
            I  L D                                          ++P     A  
Sbjct: 213 RIDQLVDATAGHERLSFMDAYSGYNQIKMHVPDQEKTTFVTSRGLYCYTVMPFGLKNAGA 272

Query: 466 LQRRAARYVLKDDNL---------VGVIVMENKNDPKRDKELKPEIIDWGRPTRDVMSRP 494
             +R  + + K  +L         VG IVMENKNDPKRDKELK EIIDWGRP RDV  RP
Sbjct: 273 TYQRMRQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRP 332

[Close]
BLAST of Moc10g02050 vs. ExPASy TrEMBL
Match: A0A6J1DZU0 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025033 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-50
Identity = 111/124 (89.52%), Postives = 114/124 (91.94%), Query Frame = 0 

Query: 284 EREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVL 343
           + + QARE RMAKYLSQV+NQL QFSKYEIRQIP AQNVNAD LARLA AYETDLGRTV 
Sbjct: 391 KEKFQARELRMAKYLSQVRNQLDQFSKYEIRQIPHAQNVNADVLARLAVAYETDLGRTVP 450

Query: 344 VEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 403
           VEILP PSIEAQEAMDID QGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK
Sbjct: 451 VEILPGPSIEAQEAMDIDNQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 510

Query: 404 DDNL 408
           DDNL
Sbjct: 511 DDNL 514

[Close]
BLAST of Moc10g02050 vs. ExPASy TrEMBL
Match: A0A6J1DVC6 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-50
Identity = 112/124 (90.32%), Postives = 115/124 (92.74%), Query Frame = 0 

Query: 284 EREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVL 343
           + E QAREPRMAKYLSQV+NQL QFSKYEI QIPRAQNV+ADALARLAA YETDLGRTV 
Sbjct: 728 KEEFQAREPRMAKYLSQVRNQLDQFSKYEIXQIPRAQNVDADALARLAAXYETDLGRTVP 787

Query: 344 VEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 403
           VEILPEPSIEAQEAMDID QGQ EEN KSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK
Sbjct: 788 VEILPEPSIEAQEAMDIDNQGQXEENXKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 847

Query: 404 DDNL 408
           DDNL
Sbjct: 848 DDNL 851

[Close]
BLAST of Moc10g02050 vs. ExPASy TrEMBL
Match: A0A6J1DVC6 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-31
Identity = 86/139 (61.87%), Postives = 100/139 (71.94%), Query Frame = 0 

Query: 150 NPDTRRNFDPRRGRTRSSLNEATDLSGEARPSPGHRLNSTTLDRGEPVTSLNEATDLSSE 209
           NPD     +  R     SL +A D   EARPSP  +LN TTLD GEPV+ LN+ATDLS +
Sbjct: 2   NPD-----ESHRCFEEKSLKKAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGK 61

Query: 210 VTPSPGHQLNSTTLDRGEPVTSLNEATDLSGEVTPSPGHQLNSTTLDKGEPAEAVESVPQ 269
             PSPG++LN TTLD+G PV  L +ATDLSG+  PSPGH+LNSTTLD+GEPAE VESVP 
Sbjct: 62  ARPSPGYRLNPTTLDKGGPVAGLIKATDLSGDARPSPGHRLNSTTLDRGEPAEEVESVPL 121

Query: 270 TAEHRRVNIRTR--SSERE 287
           TAE RRVNI T+  S ERE
Sbjct: 122 TAEDRRVNIGTKLGSEERE 135


HSP 2 Score: 205.3 bits (521), Expect = 6.2e-49
Identity = 109/124 (87.90%), Postives = 113/124 (91.13%), Query Frame = 0 

Query: 284 EREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVL 343
           + E QARE RM KYLSQV+NQL QFSKYEIRQIPRAQNVNADALARLA  YETDLGRTV 
Sbjct: 184 KEEFQARESRMTKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLATTYETDLGRTVP 243

Query: 344 VEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 403
           VEIL  PSIEAQEAMDID+QGQPEENWKS LIKYLKDGILPTEKIEAQQLQ+RAARYVLK
Sbjct: 244 VEILLGPSIEAQEAMDIDDQGQPEENWKSLLIKYLKDGILPTEKIEAQQLQQRAARYVLK 303

Query: 404 DDNL 408
           DDNL
Sbjct: 304 DDNL 307

[Close]
BLAST of Moc10g02050 vs. ExPASy TrEMBL
Match: A0A6J1E1Q5 (uncharacterized protein LOC111025623 OS=Momordica charantia OX=3673 GN=LOC111025623 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-42
Identity = 99/124 (79.84%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 284 EREVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVL 343
           + E QAREPRMAKYLS+VK+QL QFSK+EIRQIP  QNVNADALARLAAAY TDLGRT+ 
Sbjct: 331 KEEFQAREPRMAKYLSRVKDQLGQFSKFEIRQIPCTQNVNADALARLAAAYGTDLGRTIS 390

Query: 344 VEILPEPSIEAQEAMDIDEQGQPEENWKSPLIKYLKDGILPTEKIEAQQLQRRAARYVLK 403
           VEIL EPSI+AQE MDIDEQ Q EENW S LIKYLKDGILP E IE QQLQR+AARYVLK
Sbjct: 391 VEILLEPSIKAQEKMDIDEQRQSEENWMSHLIKYLKDGILPDEMIEGQQLQRQAARYVLK 450

Query: 404 DDNL 408
           D++L
Sbjct: 451 DESL 454

[Close]
BLAST of Moc10g02050 vs. ExPASy TrEMBL
Match: A0A6J1DPJ5 (uncharacterized protein LOC111023016 OS=Momordica charantia OX=3673 GN=LOC111023016 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.9e-38
Identity = 127/350 (36.29%), Postives = 174/350 (49.71%), Query Frame = 0 

Query: 226 GEPVTSLNEATDLSGEVTPSPGHQLNSTTLDKGEPAEAVESVPQTAEHRRVNIRTRSSER 285
           GEPVT LN+ATDLSGE  PSPGH+LNSTTLD+G  AE VESVP T E +RVNI T+    
Sbjct: 33  GEPVTGLNKATDLSGEARPSPGHRLNSTTLDRGGSAEEVESVPLTVEEQRVNIGTKLGNE 92

Query: 286 EVQAREPRMAKYLSQVKNQLYQFSKYEIRQIPR---AQNVNADALAR------------- 345
           E ++    +  +L +    ++ +S  ++ +I R      +N D   +             
Sbjct: 93  ERES----LINFL-RSNADVFAWSPEDMPRIDRGVMVHRLNVDESCKPVKQKRRAFNQER 152

Query: 346 --LAAAYETDLGRTVLVE------------ILPEPSIEAQEAMDIDEQGQ--PEENWKSP 405
             + A +  +L +T  +             ++ +P+ + +  +D  +  +  P++ +  P
Sbjct: 153 NEIVAEHVNELLKTGFIREVHYPQWISNVVLVKKPNGKWRMCIDFTDLNKVCPKDYFPLP 212

Query: 406 LIKYLKDG-----------------------------------------ILPTEKIEAQQ 465
            I  L D                                          ++P     A  
Sbjct: 213 RIDQLVDATAGHERLSFMDAYSGYNQIKMHVPDQEKTTFVTSRGLYCYTVMPFGLKNAGA 272

Query: 466 LQRRAARYVLKDDNL---------VGVIVMENKNDPKRDKELKPEIIDWGRPTRDVMSRP 494
             +R  + + K  +L         VG IVMENKNDPKRDKELK EIIDWGRP RDV  RP
Sbjct: 273 TYQRMRQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRP 332

The following BLAST results are available for this feature:
BLAST of Moc10g02050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156571.11.8e-5090.32uncharacterized protein LOC111023448 [Momordica charantia][more]
XP_022156571.13.2e-3161.87uncharacterized protein LOC111023448 [Momordica charantia][more]
XP_022154103.11.3e-4887.90uncharacterized protein LOC111021439 [Momordica charantia][more]
XP_022159204.12.4e-4279.84uncharacterized protein LOC111025623 [Momordica charantia][more]
XP_022156048.11.0e-3736.29uncharacterized protein LOC111023016 [Momordica charantia][more]
BLAST of Moc10g02050 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc10g02050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZU01.1e-5089.52Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025033 PE=4 SV=1[more]
A0A6J1DVC61.9e-5090.32Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1[more]
A0A6J1DVC61.5e-3161.87Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1[more]
A0A6J1E1Q51.1e-4279.84uncharacterized protein LOC111025623 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DPJ54.9e-3836.29uncharacterized protein LOC111023016 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Moc10g02050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 274..343
e-value: 5.7E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..466

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g02050.1Moc10g02050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component GO:0030430 host cell cytoplasm
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity