Moc10g01950 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g01950
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	MADS-box transcription factor 6-like
Location	chr10: 1214748 .. 1218669 (-)
RNA-Seq Expression	Moc10g01950
Synteny	Moc10g01950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAGGAAAAGTGGTGCTTGAGAGAATAGAGAACAAAGTGAACCGCCAAGTCACATTCTCAAAGCGCAGAAATGGGTTACTGAAGAAGGCCTATGAGCTCTCTGTGCTCTGTGATGTAGATGTTGCTCTCATCATCTTCTACAGCCGTGGCAAGCTCTTCGAATTTTCCAGCACTGAGTCAGCTCTCTATTCTCTCTCTCTCTCTCTCTATTCTTTATCCCATATCCCTCTTAATTCAATTCTTTGTTCTTTATATTCATCAGCATGAACAAGATTCTTGAGAGGTACCACCAGCGATGTTACAGCTCTGGATCCACCAGCAACCTTGATGAGAGTGACGTTCAGGTTCTCATTCCATTTCTTGAAACAAATTCTGATCGAGGATGTACAAAATCAGATCACATCTAACTTTTGTTTATGTTTTTTCTGGCAGATAGAAGAGGTTTCAAAGCTGAGAGCCAAATATGAATCTCTTCAGCGTTCCCATAGGTAATTATATAATTTAAGTATCTATTAATTGTACAATATGTGTGTGTAATGTTTCTTTAATTTTTGTTTTGTATTTTATGAAGGAACTTTCTTGGGGAAGAACTTGAGCCACTGAACCTGAAGGAGTTGCACAATCTTGAGAAACAGTTGGATAAAACTCTTTCACAAGCTAGACAGCGGAAGGTAATTAAAAATCAACACACACCATTTTTTTAATCACATGATTTGACAGAACCTGTATGAAATTCAGAATAAAAGGACATGTGTTTTGTTTATTATATTTCAGGGGTTCGTAAGTTTTTTTTTTGGTTCCACTTTATTTTTATTGTGTTGGAATTGGAACCCTTGACTAATTCTTTAGAATAATTATTTCTGTTTGAATAGAGTTCTCCTATTTGATTTCTTGTGTAATTGATTGATCTCTACTGCAGACCCCTATTTGGTCGGATTTAAAATGATTGTTCTATCATTTCTTATTTGCAATTCAATGTAGTTCAAATTTCGTGTTTGTAATTGATTATGAATGATTTATCTAAACAGTATGGAAAGAAGGGATTTCTGAAATTGTTTAGAGGTTGTGATTATTTTATGTTCTCCTTTGACTTCTGTACATGAAATGCTTTTCATTGTCAACAATAATAAGATTAACCCAAAATTTTCAAAAGTTATTTTTTTAGGGGTCTGATACTGATTTCATAAAGGTGGTAGGCTAGAAAGTTCTCCATCCAAATATAGGTGGTGTTATTGTCCGATCACAATTTCATATATAGTGCGTATATTCTAGTTCAATAGTTTAAACATTTAGATTCATTTGTTGTTAAATCATTAACAAATCTAAAAGCTTGAACATTAATTAAGAATGAAATGAACTCTAATATAGGTTTGAACATAGAAAAAGAGAGGATAGAACTTGAGCTTTCTGCTCTGATACCGTATTAAAACATGATATTAAACAGTAGTGATGAAACCGGTCAAAAAACCTAAAACTCGTGTTGCTGTTATTTCGAATGAGTCTAATTAATTAAGATGTTTTTTTCTTCTTTCTTAATACCAATTAAAAAATGGGAATGTTAATCATATTCATTAATCTGTTTGTTGTTAAATGCAGGCAGAGATAATGCTTCAAAGATTAGCAGAGTTGCGCAAAATGGTATGAAAAAACAAGGTTTTTTTAGTATGATCCAACAGTTGCTTGTGTATTTATAGGTAGATGTATATGATCTTTTAAGGTTACCTGGACAATGTTTTCTATTTTTTGTTTTATGTTCTTTTTTATAAACAAAATATATTTGATAATTGTTTTTTTATTTTGTTCTTTTAAAATTTGAGTAAAAACTTAATGCCACTTAGCCCTACCAGGAAGGGATGTTTTGAGGTGGGCAAGGAAATTTTGATGGATCAAATATAATAATAGATCAAAAAAAAGGCAAAGTCTTTTTTTTTAGTTTGGCTATAGGAGCAAACAGCTCGAGATAATCGATGTGATAGGTTTGTGTGAAACCTTTCGCCACAAGACGAGCCCTCTCCATACTTAACATGAACATTGGTTGTTTGGCATAAATATTTAAAATTATTATGTTAAATCTTTTATTTATTTATTTAATATCCATTTTATAAGTTAAAAAATTAATGAAAAAAGAGAAATAAGTAATAAAAACGCTTACGTTCTCAAAAGTTGGAAACAAAAGTTAAAACCCAGCCCTTTCGACCAAACTTTCTTGAGAAAATTATCGAACATATTGCATTCATTATGGAAAAATTAAATGGTACGTAATAAAACTTTTTCTTATCAACCACCGTTTGAACAGTACCGTACTTCGTTTAATTAATATGTATTAAATGAAGAGAATGTTGGAGATTCGATCAATTGTTGAATCTTTTCACTTTTATTTATTTGATTCCATTTGATTTTAGTTCAATAATAATACGAAGCATTATTCTTTGTAGTTTAAAACTTAACATTAAATCAACATTAATATAAAGAGATGAAATTAATTTTATTCTTCTATTTTCTTTTTCTAATTTTCCATTAATTCATTGTTAGTTAGATTTCCTTTTTTATTTTTGTTTGGAAGTGAAAAGGTGAAAAAGTGACTAAGTAATTGTTTTTTTGAGGCATACAGGAGCAGGACCTTGGAGATCAAAATACTGAGCTCAAATCAAAGGTTTTCTTCTCTTGCTTCTTCTCACCTTCCCAATCAAATATATATATGCATGCTTAAATCATAATTATAACTTAGTTGTGGTCTTATTTTTAAATTTAATATCATACTTCGATTCCTGTACTTTTTTTTTTTTGGCTGTGGCAAACTTGTATAAGTGTTTAAAGTCAGTAGTGATTATGGATTTTTTTAGTATAGCAATCGTTTCGTTCCGGTTAAATATACCAAATAGTAATCCTAGGTACTTCTTAACCTTTTAAAATTCTCGATTTTATTAAGATCTTTCTCTGTTAAAAAAAAGTTAAAATCTTTTAATATTAAGTGGTTGATGTATTATTATTAAATTATTAATTTATTAACATATTTAGACGCGTGGATATGTCACTTGAATAATACTTTATGCATGAAACTCAACCCATTAATCATCGCCATTGACCAAAAGTCATTTCTTTAAGTGATGTGTCTGAGTGACATGTCATATGTCCAAATGTATTAATAAAATAATAGTTTAATGACACATAAATTCTATGTTAATGAAATTTAACAAGTGTTTATATGAAAGACTTAATCGAGAATAACCAAAAGGAAAGCTGAGATTTTTGAAAGATACCAAATTGAGAATTATATACGAGATTAGGACCATTTGATATATATTCAGTCATTTGTTTTTTTTTTTTTGTTACTTAGTATTTTTATAATTAAGCTTATAAAGAAACTATTTCACTTGTGATCTATTTTTAGGCTCCATTTGATTAACATTATTTTATCACAGGTTTTAGAATTTTTTCGATCCATATATATTATAAATCTTTGTTAAATCTTTTATCTCTTCAATGTGAGGTTTTTAATAGGTTTTATGTACTTAAAATATTTGCGGGAAGACTAAAACTTAAGGTTATTTTCAGTTGATTATTGAACATAATATTTAATTAATAGAACAAAACTTTGGTATTAGCTTGAGGAAGGACAACGACGGTTGCAACAAAGTGAAGATGGGCAGGGAGATCCAGAAGAACAAGTACCTAATTACGAAGTGGTAGGAGAAGAACCAAACATGAGCAGCAGGTTTGTTTTTAATTTTTTTTACCAGCAAATTCAAGTACATGATATATGCTTCTTAAATAATCTGAAACATTAAGTTTATAATGCACGAATAAATTAATGATTTTTGGGTGAACTATGTGTGTGTTTTTAATGAAACACAGGTGCTTTGATGTCCAAGAAGAAGAAGAAGCCAGGGCAGCCATGGCAGGAGGAAGGGAGTAA

mRNA sequence

ATGGGTAGAGGAAAAGTGGTGCTTGAGAGAATAGAGAACAAAGTGAACCGCCAAGTCACATTCTCAAAGCGCAGAAATGGGTTACTGAAGAAGGCCTATGAGCTCTCTGTGCTCTGTGATGTAGATGTTGCTCTCATCATCTTCTACAGCCGTGGCAAGCTCTTCGAATTTTCCAGCACTGACATGAACAAGATTCTTGAGAGGTACCACCAGCGATGTTACAGCTCTGGATCCACCAGCAACCTTGATGAGAGTGACGTTCAGATAGAAGAGGTTTCAAAGCTGAGAGCCAAATATGAATCTCTTCAGCGTTCCCATAGGAACTTTCTTGGGGAAGAACTTGAGCCACTGAACCTGAAGGAGTTGCACAATCTTGAGAAACAGTTGGATAAAACTCTTTCACAAGCTAGACAGCGGAAGGCAGAGATAATGCTTCAAAGATTAGCAGAGTTGCGCAAAATGCTTGAGGAAGGACAACGACGGTTGCAACAAAGTGAAGATGGGCAGGGAGATCCAGAAGAACAAGTACCTAATTACGAAGTGGTAGGAGAAGAACCAAACATGAGCAGCAGGTGCTTTGATGTCCAAGAAGAAGAAGAAGCCAGGGCAGCCATGGCAGGAGGAAGGGAGTAA

Coding sequence (CDS)

ATGGGTAGAGGAAAAGTGGTGCTTGAGAGAATAGAGAACAAAGTGAACCGCCAAGTCACATTCTCAAAGCGCAGAAATGGGTTACTGAAGAAGGCCTATGAGCTCTCTGTGCTCTGTGATGTAGATGTTGCTCTCATCATCTTCTACAGCCGTGGCAAGCTCTTCGAATTTTCCAGCACTGACATGAACAAGATTCTTGAGAGGTACCACCAGCGATGTTACAGCTCTGGATCCACCAGCAACCTTGATGAGAGTGACGTTCAGATAGAAGAGGTTTCAAAGCTGAGAGCCAAATATGAATCTCTTCAGCGTTCCCATAGGAACTTTCTTGGGGAAGAACTTGAGCCACTGAACCTGAAGGAGTTGCACAATCTTGAGAAACAGTTGGATAAAACTCTTTCACAAGCTAGACAGCGGAAGGCAGAGATAATGCTTCAAAGATTAGCAGAGTTGCGCAAAATGCTTGAGGAAGGACAACGACGGTTGCAACAAAGTGAAGATGGGCAGGGAGATCCAGAAGAACAAGTACCTAATTACGAAGTGGTAGGAGAAGAACCAAACATGAGCAGCAGGTGCTTTGATGTCCAAGAAGAAGAAGAAGCCAGGGCAGCCATGGCAGGAGGAAGGGAGTAA

Protein sequence

MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSSTDMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMLEEGQRRLQQSEDGQGDPEEQVPNYEVVGEEPNMSSRCFDVQEEEEARAAMAGGRE

Homology

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BLAST of Moc10g01950 vs. NCBI nr
Match: XP_022141193.1 (MADS-box transcription factor 6-like [Momordica charantia])

HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103
Identity = 210/224 (93.75%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKM--------------LEEGQRRLQQSE 180
           ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKM              LEEGQRRLQQSE
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEEGQRRLQQSE 180

Query: 181 DGQGDPEEQVPNYEVVGEEPNMSSRCFDVQEEEEARAAMAGGRE 211
           DGQGDPEEQVPNYEVVGEEPNMSSRCFDVQEEEEARAAMAGGRE
Sbjct: 181 DGQGDPEEQVPNYEVVGEEPNMSSRCFDVQEEEEARAAMAGGRE 224

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BLAST of Moc10g01950 vs. NCBI nr
Match: XP_038886448.1 (agamous-like MADS-box protein MADS3 [Benincasa hispida])

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-75
Identity = 167/225 (74.22%), Postives = 184/225 (81.78%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF SRGKLFEF ST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSSRGKLFEFGST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILERYHQRCYSSGS++NLDESD+QIEEV+KLRAKYESL+RS+RNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSSTNLDESDIQIEEVAKLRAKYESLRRSNRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKM--------------LEEGQRRLQQSE 180
           ELHNLEKQLDKTLS  RQRKAEIMLQ+LA+LRKM              LEE Q+ +Q+ E
Sbjct: 121 ELHNLEKQLDKTLSHTRQRKAEIMLQKLADLRKMEQDLGDQNTQLKSKLEEEQQCMQEKE 180

Query: 181 DGQGDPEEQVPNYEVVGEEPNMS-SRCFDVQEEEEARAAMAGGRE 211
           DG+ DP     NY++VG +PNM+  R FD QEEE      AG  +
Sbjct: 181 DGEEDP----MNYKLVGADPNMNIPRYFDPQEEEGRGMIEAGNND 221

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BLAST of Moc10g01950 vs. NCBI nr
Match: XP_011651126.1 (agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8650443.1 hypothetical protein Csa_009943 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 1.0e-73
Identity = 166/222 (74.77%), Postives = 185/222 (83.33%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILERYHQ+CY+SGST+NLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPL LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLTLK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKM----------LEEGQRRLQQSEDGQG 180
           ELHNLEKQLDKTLSQARQRKAEIMLQ+LA+LRKM          L+    + Q+ E G+ 
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLRKMEQDLGDQNTQLKSKLEKDQEQEGGEE 180

Query: 181 DPEEQVPNYEVV-GEEPNM--SSRCFDVQ-EEEEARAAMAGG 209
           DP+    NYEVV  ++PNM  ++R ++ Q EEEE R  + GG
Sbjct: 181 DPK----NYEVVRADDPNMINTTRYYEAQEEEEECRGVIDGG 218

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BLAST of Moc10g01950 vs. NCBI nr
Match: XP_008439145.1 (PREDICTED: MADS-box transcription factor 17-like [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-72
Identity = 162/226 (71.68%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILERYHQ+CY+SGST+NLDESD+QIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKM----------------LEEGQRRLQQ 180
           ELHNLEKQLDKTLSQARQRKAEIMLQ+LA+L KM                 ++ Q+ +Q+
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLHKMEQDLGDQNNQLKSKLEKDQDQQCVQE 180

Query: 181 SEDGQGDPEEQVPNYEVV-GEEPNM--SSRCFDVQEEEEARAAMAG 208
            E G+ DP+    NYEVV  ++PNM  ++R F+ QEEEE      G
Sbjct: 181 QEGGEEDPK----NYEVVRADDPNMVNTTRYFEAQEEEEEEEECRG 222

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BLAST of Moc10g01950 vs. NCBI nr
Match: KAA0033595.1 (MADS-box transcription factor 17-like [Cucumis melo var. makuwa] >TYK22261.1 MADS-box transcription factor 17-like [Cucumis melo var. makuwa])

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-62
Identity = 129/140 (92.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILERYHQ+CY+SGST+NLDESD+QIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDKTLSQARQRK 141
           ELHNLEKQLDKTLSQARQRK
Sbjct: 121 ELHNLEKQLDKTLSQARQRK 140

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BLAST of Moc10g01950 vs. ExPASy Swiss-Prot
Match: Q8LLR1 (Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.3e-46
Identity = 97/153 (63.40%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKAYELSVLCD +VALIIF SRGKL+EF S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
              K LERY + CY+    +   E+    +EVSKL+AKYESLQR+ R+ LGE+L PL++K
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRK 154
           EL NLEKQL+  L+QARQRK ++M++++ +LR+
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRR 153

[Close]

BLAST of Moc10g01950 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.7e-45
Identity = 102/174 (58.62%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKAYELSVLCD +VALIIF SRGKL+EF S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILERYHQRCYSSGSTSN-LDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNL 120
            + K LERY   CY++  ++N L E+     E+SKL+AK+E+LQR+ R+ LGE+L PL++
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 121 KELHNLEKQLDKTLSQARQRKAEIMLQRLAELR---KMLEEGQRRLQQSEDGQG 171
           KEL  LEKQL+  LSQARQRK ++M++++ ELR   + L E  R+L+   + +G
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEG 174

[Close]

BLAST of Moc10g01950 vs. ExPASy Swiss-Prot
Match: Q7XUN2 (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-43
Identity = 102/177 (57.63%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKAYELSVLCD +VALIIF SRGKL+EF S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILERYHQRCYSS-GSTSNLDESDVQ--IEEVSKLRAKYESLQRSHRNFLGEELEPL 120
            +NK LE+Y+  CY++ GS S L   + Q   +E+S+L+ K E LQRS R+ LGE+L PL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 121 NLKELHNLEKQLDKTLSQARQRKAEIMLQRLAELR---KMLEEGQRRLQQSEDGQGD 172
           ++KEL  LEKQL+ +LSQARQRK +IM++++ +LR   + L E  ++L+   + + D
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEAD 177

[Close]

BLAST of Moc10g01950 vs. ExPASy Swiss-Prot
Match: P29386 (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-41
Identity = 90/155 (58.06%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRG+V ++RIENK+NRQVTFSKRRNGLLKKAYELSVLCD +VALIIF SRGKL+EF S 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQ--IEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
            +   +ERY+ RCY+   ++N  E   Q   +EV+KL++KYESL R++RN LGE+L  + 
Sbjct: 61  GIESTIERYN-RCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 120

Query: 121 LKELHNLEKQLDKTLSQARQRKAEIMLQRLAELRK 154
           +KEL  LE+QL+  L+  RQRK ++M++ + +LRK
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRK 154

[Close]

BLAST of Moc10g01950 vs. ExPASy Swiss-Prot
Match: Q39685 (MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.0e-41
Identity = 101/168 (60.12%), Postives = 123/168 (73.21%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKAYELSVLCD +VALI+F +RGKL+EF ST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  D-MNKILERYHQRCYSSGSTSN-LDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
             MNK LERY +  Y S  TS    E++   +E  KL+AK + LQRSHRN LGE+L  L+
Sbjct: 61  SCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELS 120

Query: 121 LKELHNLEKQLDKTLSQARQRKAEIMLQRLAELRK---MLEEGQRRLQ 164
            KEL  LE QLDK+L Q R  K + ML +LA+L+K   ML E  R L+
Sbjct: 121 TKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALK 168

[Close]

BLAST of Moc10g01950 vs. ExPASy TrEMBL
Match: A0A6J1CJS1 (MADS-box transcription factor 6-like OS=Momordica charantia OX=3673 GN=LOC111011649 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.1e-104
Identity = 210/224 (93.75%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKM--------------LEEGQRRLQQSE 180
           ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKM              LEEGQRRLQQSE
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEEGQRRLQQSE 180

Query: 181 DGQGDPEEQVPNYEVVGEEPNMSSRCFDVQEEEEARAAMAGGRE 211
           DGQGDPEEQVPNYEVVGEEPNMSSRCFDVQEEEEARAAMAGGRE
Sbjct: 181 DGQGDPEEQVPNYEVVGEEPNMSSRCFDVQEEEEARAAMAGGRE 224

[Close]

BLAST of Moc10g01950 vs. ExPASy TrEMBL
Match: A0A1S3AY43 (MADS-box transcription factor 17-like OS=Cucumis melo OX=3656 GN=LOC103484028 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.2e-73
Identity = 162/226 (71.68%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILERYHQ+CY+SGST+NLDESD+QIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKM----------------LEEGQRRLQQ 180
           ELHNLEKQLDKTLSQARQRKAEIMLQ+LA+L KM                 ++ Q+ +Q+
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLHKMEQDLGDQNNQLKSKLEKDQDQQCVQE 180

Query: 181 SEDGQGDPEEQVPNYEVV-GEEPNM--SSRCFDVQEEEEARAAMAG 208
            E G+ DP+    NYEVV  ++PNM  ++R F+ QEEEE      G
Sbjct: 181 QEGGEEDPK----NYEVVRADDPNMVNTTRYFEAQEEEEEEEECRG 222

[Close]

BLAST of Moc10g01950 vs. ExPASy TrEMBL
Match: A0A5D3DF02 (MADS-box transcription factor 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00130 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 129/140 (92.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILERYHQ+CY+SGST+NLDESD+QIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDKTLSQARQRK 141
           ELHNLEKQLDKTLSQARQRK
Sbjct: 121 ELHNLEKQLDKTLSQARQRK 140

[Close]

BLAST of Moc10g01950 vs. ExPASy TrEMBL
Match: A0A6J1E935 (MADS-box transcription factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC111430519 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 6.3e-61
Identity = 141/206 (68.45%), Postives = 162/206 (78.64%), Query Frame = 0


Query: 2   GRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSSTD 61
           G+GKVV+ERIENKVNRQVTFSKRRNGLLKKA ELSVLCDVDVALI+F SRGKLFEF STD
Sbjct: 15  GKGKVVVERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIMFSSRGKLFEFGSTD 74

Query: 62  MNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKE 121
           MNKILERYH RCY++GST+NL  + VQIEEVSKLRAKYESLQRSHRN +GEELE L++KE
Sbjct: 75  MNKILERYHHRCYNTGSTTNLHHTHVQIEEVSKLRAKYESLQRSHRNLVGEELEALSIKE 134

Query: 122 LHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMLEEGQRRLQQSEDGQGDPEEQVPNYEV 181
           LH LEKQLDKTLSQ R RK EIMLQ++A+ RKM +E            GD   Q+ + +V
Sbjct: 135 LHTLEKQLDKTLSQTRHRKVEIMLQKIADTRKMEQE-----------LGDVNTQLKS-KV 194

Query: 182 VGEEPNMSSRCFDVQEEEEARAAMAG 208
            G+E    +   + QEEEE  A +AG
Sbjct: 195 EGQECMQQN---EEQEEEEEGAMLAG 205

[Close]

BLAST of Moc10g01950 vs. ExPASy TrEMBL
Match: A0A6P9EZQ4 (agamous-like MADS-box protein MADS3 isoform X4 OS=Juglans regia OX=51240 GN=LOC108998622 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.3e-55
Identity = 121/177 (68.36%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRG+VVLERIENK+NRQVTFSKRRNGLLKKA+ELSVLCD +VALIIF SRGKLF+F ST
Sbjct: 1   MGRGRVVLERIENKINRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSSRGKLFQFGST 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           +MNKILERY Q CYS  +      +     E+++LRAKYESLQRS R+ LGE+LEPLNLK
Sbjct: 61  EMNKILERYRQCCYSQDTDVVEQGTQTLYREITRLRAKYESLQRSQRHMLGEDLEPLNLK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMLEEGQRRLQQSEDGQGDPEEQVP 178
           EL NLEKQLDKTLS+ARQRK +IML RL ELR+ +EE  +R+ ++  G G+P  Q P
Sbjct: 121 ELQNLEKQLDKTLSRARQRKTQIMLDRLEELRQKIEEKGQRVHEAIQGPGNPTTQAP 177

[Close]

BLAST of Moc10g01950 vs. TAIR 10
Match: AT2G45650.1 (AGAMOUS-like 6 )

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 90/155 (58.06%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRG+V ++RIENK+NRQVTFSKRRNGLLKKAYELSVLCD +VALIIF SRGKL+EF S 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQ--IEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
            +   +ERY+ RCY+   ++N  E   Q   +EV+KL++KYESL R++RN LGE+L  + 
Sbjct: 61  GIESTIERYN-RCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 120

Query: 121 LKELHNLEKQLDKTLSQARQRKAEIMLQRLAELRK 154
           +KEL  LE+QL+  L+  RQRK ++M++ + +LRK
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRK 154

[Close]

BLAST of Moc10g01950 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-39
Identity = 96/173 (55.49%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEF-SS 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKAYELSVLCD +VALIIF +RGKL+EF SS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  TDMNKILERYHQRCYSSGSTSNLDESDVQ--IEEVSKLRAKYESLQRSHRNFLGEELEPL 120
           ++M K L+RY +  Y S   +N    +++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDKTLSQARQRKAEIMLQRLAELR---KMLEEGQRRLQQSED 168
           N KEL  LE+QLD +L Q R  K + ML +L++L+   +ML E  R L    D
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLD 173

[Close]

BLAST of Moc10g01950 vs. TAIR 10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-39
Identity = 96/173 (55.49%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEF-SS 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKAYELSVLCD +VALIIF +RGKL+EF SS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  TDMNKILERYHQRCYSSGSTSNLDESDVQ--IEEVSKLRAKYESLQRSHRNFLGEELEPL 120
           ++M K L+RY +  Y S   +N    +++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDKTLSQARQRKAEIMLQRLAELR---KMLEEGQRRLQQSED 168
           N KEL  LE+QLD +L Q R  K + ML +L++L+   +ML E  R L    D
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLD 173

[Close]

BLAST of Moc10g01950 vs. TAIR 10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-39
Identity = 89/155 (57.42%), Postives = 115/155 (74.19%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKAYELSVLCD +V+LI+F +RGKL+EF ST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  -DMNKILERYHQRCYSSGSTSNLDESDVQ--IEEVSKLRAKYESLQRSHRNFLGEELEPL 120
            +M K LERY +  Y S   +N    +++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDKTLSQARQRKAEIMLQRLAELR 153
           N KEL  LE+QLD +L Q R  K + ML +L++L+
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQ 155

[Close]

BLAST of Moc10g01950 vs. TAIR 10
Match: AT3G61120.1 (AGAMOUS-like 13 )

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 81/157 (51.59%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60
           MGRGKV ++RIENK+ RQVTFSKR++GLLKKAYELSVLCD +V+LIIF + GKL+EFS+ 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
            + + +ERY++   +      L+++    +EV+KL+ KYESL R+HRN +GE+LE +++K
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIK 120

Query: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMLEE 158
           EL  LE+QL+  LS  R++K ++M++++ ELR+   E
Sbjct: 121 ELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERE 157

The following BLAST results are available for this feature:

BLAST of Moc10g01950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141193.1	1.3e-103	93.75	MADS-box transcription factor 6-like [Momordica charantia]	[more]
XP_038886448.1	1.9e-75	74.22	agamous-like MADS-box protein MADS3 [Benincasa hispida]	[more]
XP_011651126.1	1.0e-73	74.77	agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8650443.1 hypothetical...	[more]
XP_008439145.1	1.5e-72	71.68	PREDICTED: MADS-box transcription factor 17-like [Cucumis melo]	[more]
KAA0033595.1	2.4e-62	92.14	MADS-box transcription factor 17-like [Cucumis melo var. makuwa] >TYK22261.1 MAD...	[more]

BLAST of Moc10g01950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LLR1	7.3e-46	63.40	Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=...	[more]
Q6EU39	4.7e-45	58.62	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]
Q7XUN2	1.5e-43	57.63	MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
P29386	2.4e-41	58.06	Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 ...	[more]
Q39685	7.0e-41	60.12	MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1	[more]

BLAST of Moc10g01950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJS1	6.1e-104	93.75	MADS-box transcription factor 6-like OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A1S3AY43	7.2e-73	71.68	MADS-box transcription factor 17-like OS=Cucumis melo OX=3656 GN=LOC103484028 PE...	[more]
A0A5D3DF02	1.2e-62	92.14	MADS-box transcription factor 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1E935	6.3e-61	68.45	MADS-box transcription factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC1114305...	[more]
A0A6P9EZQ4	2.3e-55	68.36	agamous-like MADS-box protein MADS3 isoform X4 OS=Juglans regia OX=51240 GN=LOC1...	[more]

BLAST of Moc10g01950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45650.1	1.7e-42	58.06	AGAMOUS-like 6	[more]
AT5G15800.1	1.0e-39	55.49	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	1.0e-39	55.49	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	2.3e-39	57.42	K-box region and MADS-box transcription factor family protein	[more]
AT3G61120.1	1.2e-38	51.59	AGAMOUS-like 13	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..210
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..156
None	No IPR available	PANTHER	PTHR48019:SF70	TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1	coord: 1..156
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 86.34 coord: 38..59 score: 58.44 coord: 3..23 score: 65.94
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 5.8E-38 score: 142.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 9.7E-26 score: 89.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 31.20229
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 88..159 e-value: 5.3E-19 score: 68.2
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 85..173 score: 13.038777
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..94 e-value: 4.6E-29 score: 102.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..85
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..78 e-value: 5.75101E-43 score: 137.298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g01950.1	Moc10g01950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding