Moc10g01470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g01470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA-directed RNA polymerase III subunit RPC3
Location	chr10: 922385 .. 928682 (-)
RNA-Seq Expression	Moc10g01470
Synteny	Moc10g01470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACGACTCAGAATGGCATCAAATACGCCGTCCACATTATCACTGCGCACTTCGGCAATCTCGTCGCGGTATGTCTTTTTAATCTTCGCTTCGTATGAAATTATCGGCCTGTTCTTCTTCGTATTGTTGCTGTTCAATATTATTGTTTGTGCATTGCAGAAAGTGTGCGAAACGCTGCTCCGAAAGGGGCCTCTGACGCTGAGACTTCTCATACGATTCACGGAACTCAACTCCTCACAAGTTAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTGCAAGCGTTCACTTCAGTGACCGAAGGTAGAATGTGTTCTCATTCATTGTAAACGTTCTGGGTGGTATTGGTAAAGCAATTGTTTGGTTAATTATTGACAATAAAATTTGGATTTTAGAATTGAGTTCAGTAGAATTCGCATAACTGGTATTCTATTGAGTCACTTAAAAGAATTAATTAATTTATGCACAGTTTAAGCCAATTCGTTCTTAGATTTATTGTCTCTGACAGGAAATTACTTATGGAACCACATGAACATCCTATTGGATGAAGAGCGTTTTAAGCAGGCTGTATTGTTTTTCCCGGGAAGCACACCATTTGTGTATTGATTGAGTTTCTTATCATTGTTATTGAAATTGTTTGTGTAGGTGAGTTTGGAGACGCGCCGAAGACTGACACGCAATACTTGGCGTTGTTTAGTAACATACTTCATCGCATGAGATTTTCCAAATTCCTGGCAGTTGCTTCGGAAAAGCTTGAGAAAGATAAAAATGTTAATTCATTTACTCACATTGGAAAATCTTTCTTATCGAAAATTTTCAACTTCAGGTGAATTTAGGTTTTTGACTAATGTTTCTGATTTCGCAGTGTGAAGAACTTCTCGAGGGTCTGCTGCAAAATGGTAGGCTTTCAATGGAACAATTGGTTGAAAGAGCCAAGTCAAGTAAACATGCAGGCAAGTTTATAATAAGTAAACATAGTAGGCTTTCGTGCAGGCAATTGTTGTTGTTTACTCCTATATGCAGTATTTCTAATAAGCTACTTTTTCATGGTGGCATAAAATTGTGTATTGATTTTAATTATTAAATGGAACTTTATTATACAGTACTGGGAGATTTTAGGATTCATGGATTTCAGAGATCATATTCTTTTTCATTCATGTGAGTCCTAATATCAGATTCTATTATTCAGAGTATGAAACTGATTTCCTTGAACAAGGAAGAAGCCCAAAGCTTTTTTCTAACTACCCTATTTCTATGATTCTAGCTACTTAACAAACCTTATTGTAACCCCTTGACTTGATTGGGGTTTCAATCATCATATTGAATTTCTATTTGTTTCAAAAGAAAAAACTTGTTTTTCTTCAACTGCATCTTGTTAAGAAGAGTGATATTGGTGTGCTTAATTCCTAAAAGCTAAAACTGTGATGTGTTTTGTTGAACTCTCTGAACAAGCACATTAATGAAAATTAATATTGTAGAGAAGGCGGCTCTTGCACCGAGAAAATGTTTGTAACACGTTGTTGCTTATTATATATCTACTTATACAAACATTTGGTTTCTGAAGTATCGTTTCTGTATTTTCAGGAAACCGTCCAATTCCAGATGTTGTACACGAAAGTTTATTTAAACTTTTGACTGCCCATTTTGTCGAACGCTGTCCAGCCCCTGAACCAATTCTTTCAGCCCAAGTTGAAGAACAGCCTCCTCCGAAAAAAAGAGGTGCTAAGGCTGCCAAGGTAGCTGCATATTTATGAAACCTTTCATGCGTAGTGGTGCTAAATATTATCTCTGAGTCATTAAATGGATCCATAACAGATATCTGAGGTACCAGAGACCTTAGAACAGCGTCTTGTAGGAGTAGCACGTCCAATGGAAGTTCTAAGATTTTCAATGAGTGAAACCAACACTGAAGCTGAAAAGAGTGAACTACCCATTTCTGGACAGAAGGTATGTATTAGAATGTTATATCAAATTACCAAGTTGAAACATGTTTAGTACTTACTCAAAACAAAACTTTTCTGTAGCGCAAGCACGATGAGTTGGAGGCGGTACAAGAGTCTGGAGATGCTGATGGTATTATTCTTTGGCGTGCCAACTTTGATGAATTTATAAGATGTCTTAGGCATAAGGTTAGCATTATTTTATCCTACAGAATTTCTTGTACATTCTAACTAGGTGAGTATGTAATTACAATGAATGCCATGCTCCTTGTCTTGCATTCACAGTAATGGAATGAGAAAGAATACTAGGGAAAAGCAATTTAACTCACTTGAAGCCTATTGATAGAGTACTTCAGCGTGCAACTATTGCAAGTATATTGATATTATTCTCAGGTTGAGTAATGTGTATGAAACTGAGTTGGTAGTCAATACTTGCTAATTTTATACATGAGTAGGAGAAAAACTATATCTAAAACTGCAAGTTCTATTACTGACTTATTTAGAACTCAGAATATTTCGTTCTGTTGAATACTTGATAAATTATTGACTCACTAACCTTAAATGCACTGCTCATCCAACTTTTGCTCGTATTAGATCTTTCCTCCTCTTTGGATTTCCTTTAATTTCTTCGTGTGTTATAATTTGTTGCTCTTGTAGCTCTTATATTGACTTTGGTATTTTTTTTCTTCGTGTAAGTTTAAAATCTTCGCTTAATATTTTTCTTTTGATAAAATTCTTTTATTGTGCTATTTTTGGAAATTTATTTATTATCCGGTGGTCAATTCAAGTAGTAATTGAATCAATATCTTTCTATGGCTTTAGGCTTGCATTGAACATGTCAGATCGCAGTTTGATGATGGAGTAGTAAATGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAACTGTGAAAACAGAGATAACAGGTCAATCCAACGCTTGTATAGATTCCTCAAGGACTTTAGTTATGAAATTTTTTTATCTTGATGCACATTGATTATATAAAAAATGAAAATATTAATGAAAACATGTTTGCTTAATTGCTTTGTACAAGTTGTTATCTCATGTTTTATTTTAGTTTATATTTAAAAATGATTTGATTTTTAGAACAATTGAAGTACTTCTAAAATTATGGTCTTTTAAACAGTGATTTTAAGTGCATAATAACCTTAATCTTTATAAACCTTGGCAGAAAGCTTTTTTCCCGAACAGCTCTCAGGTTTCATATTTGATTTTTTTCTCTTGGCATTAATTCATTTACTTCAATGCGGAAAAAATGACCCCTACAAAGCCTACCAGTAGGTAAGCAAAAATCGGATGCATGGTTCATGATACATTTTTTAAAGAATAAATCATAAACAATAGGGCCTTAGAAATATAATAAAATGACGCATGATTTGGAAACTACCATAGAAATGTGTTATCCTCCGCCACCTATGTCTACTTTTATGTCTCCTGTTCTAAAAATTCAATTGTTTGCAGTTCCTTTATCGTTGGATAACATATATGAGGAGGTTATGAAGAATGAAGTAGGACGTAGTATGACCTTAGATCGAGTTGAAGCTTCCCTCTCTGCATTGGGTTGTCCAGGGATGGATGATTATAAAATTAGTATGTACACTCACTGCTAAGCTTTGTTTTCCGTTGTGTTTACTTTTCACACTTTCCATCTGATTTACCAAAGCTGCTTCTCAAAAATTTTGCTTGCACAGATTTAAGGAAGATTATTGAACAAGCTCAAATTGAGGAGGTATCTCCCTTCCTCTCCCTCTCTCTTTCATTTATTTAGTGAAAAATACACCTTTGTTTTTTGAGATTTGAGAAATGGCTTGTCTCGGTTCCTAAATTTTAAAAAACGACGTCTTATTGCTTGCAATCAGTTGATTTAAATCTCGAACCTGAGCTAGTTTGATAGCAGTGCTATCCTTCTCTGATCCCTTGCATTTGTACCGATGGATTAATTTAAATTATCTTGATTTTAGGTTGAATCAATTGTTTTAAAAAGATATGGAAGAGATGCTTACAGAATGTTCAGATTCCTATCGAGAACTGGTGGCTTGGTTGAGACAGAAAAGGTAAGGAGTTTTCAGTTCTGACACTGAAGGTTGTCAAACTGCAAAATGAAGTATGCATGACTTTTAGAAATATATAATCATTTATCATAGTGTTGTTTTTGTAGTATTTATAATTTATACATGTGTATGCGATTAATTCACAGTTGATTTAAAATTTCAAGTTGAGCAATAAATTAAAGAGTAAAAAGCTAATAATACACGTCTGTGAAGGGGGTGTTATCATCTAATAAGAATTAAAGAGGCCGCATACCAATTTACCAAGTAAGCAGAAATTTTTTCATTTCAAACTTTATTCCCCCCCCCCCCCCCCCCCCCACTTCTTTCATATATACTTTAGAATTGTTAGTTTTTATTCTTAATATTTTGGAATTGGCTATTCTTGAAAAAAAAAATTAATTAGTTTAGTTATTTTTCAGACATTCCATGTCTTTTTTTGTAGATTTCTGATAGTTCATTTGTTGATAAGAATGAAGCGCCTAAGATTCTATATAGGTTGTGGAAGGACGAGTACCTATACATGGAGGTAAACATATTTTTGCTCTGTATGCGTGTGTTTTTGCATCCACATTCATATATTTAATGAAGCAAGAATACCAAACTTTTCTTTTTATAATAAGAAACGCAGCACTTCTCATCAAGAGAGTTGAAAATTACAAAGCGAGACCATGGAGGAAGCAGGGATACCATATTGGATAGCCTGTTTGAGTCTGATAGCATTGGACATATTGGTTTTTCAATGTTTGTTAAGAGCTGAAGATAATTGTGTGTATCAGACATGGACATACCAAGAAAAAAACATAGAAGGTTCTTACCAAAAAAAAAACATCAGAAGGATAGTTAATGTTTGATTAGACTTGTCATATGACATTCATTTAGTACTTCATTTTACATTACATTGTATACCTCTGCTATAAGGCATAATATTGTTTAACAACACGTAATTTACAATATGAAATGACATTGATATGACCTTACTTGAACAAAATCTGCTATATAGGTTGTACAATAGTGTCTAAATCTTTACCACATACATGCATAAATCTAAATTATTTTATTTTTTGCTTATCCTTGTCTTATTTATATATTATCACTATTTTGACATTTATGTATTTACAAGTCTGAGTCACACCATATCTATAATAGTGTGTCTCTCTTTGTTTTCTTCGTATCTGTGTGTCATCTTATACCTACACTGGCTAGTCGTGTCCTTTACCACTTGAAAGATTTACATTGTTAGTCTTTTTGGGGGCATTTTGGGCACATCCTAGTAAAACAATTTATCTTTGTTGCAGAAAGTAGCTCTAACAGGACCTAGACATTCCCTATGCTTGTTGTGGAGAGTAGACAAATACAATTTGTGGGAACATGTTCTCGATGAGATGTACCATGCTTCATTGAACTTGCAGCTACGACAGGCTTATGAGATGGAACAAGACAAAGAGGTTTTTGAGTTGGGATTTTGCCATGTTAATTTATACTATGCATCATAACTGATCATTTGGACATTTAAGTTATTTTAGACTCCTTTACAAAGATATGGCCTATGGCTTCAAGTCCTCATAATTTAAGCAACAACAGGGGCAGCAAATAAAGGGCTTGTTTTATATTTAGTTTAGTTTGCTGATAAATTTGTATAATTGGGGTAGTTTCAATTAATGTGGTGGAACCATAAGTGTACCTGTTTGCGGTCTTCTCAAAAGTTTTTGCTCCCACTTGATTCTCAGTCATCTAATTTGCGTATTTCCTACTAGTAGAAATCAAATCATTGCCTTTTTTATCTGCTTCTAGTACATCTGAGCTATTAGTGCGGTTTGCTTCCTAGTTTTTAATAATAATGTCTATAAACTCAGTTTTGTGGCTGAATGACAGGATACTTTCATATGAATCGGAGCAGATCCCCGTTTGTTTAATCACCCCTTTAAGCTTATCATACTCTTTATGGTGTTTGTCTTAGTTTGATTAATTATGGGTTTGTGCCGTATCTAACAGAATTGTCATTGCTATTGCTATTATTTAAAGAAAAAAATATTTGGATTGAAGATCTCTTTCTGGTGATTCCTTCCATGTCTTCTCACTGTGTATTACGTGGGCATATTCACATACTGATTTCTTGCTGTGCATCTCTTTTCCAGCTTCTGAGTCTTCCACCAGATAAGCGTGGCGGGCCACTCGAGAAAAGATATAATCGTCTGAGGAATGTCAGGATACTCCTGGAGTCGTCGTTGCTGAAGCTGGACGATGCACTAATGCTTTTCCATGACTTCTAA

mRNA sequence

ATGGGGACGACTCAGAATGGCATCAAATACGCCGTCCACATTATCACTGCGCACTTCGGCAATCTCGTCGCGAAAGTGTGCGAAACGCTGCTCCGAAAGGGGCCTCTGACGCTGAGACTTCTCATACGATTCACGGAACTCAACTCCTCACAAGTTAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTGCAAGCGTTCACTTCAGTGACCGAAGGTGAGTTTGGAGACGCGCCGAAGACTGACACGCAATACTTGGCGTTGTTTAGTAACATACTTCATCGCATGAGATTTTCCAAATTCCTGGCAGTTGCTTCGGAAAAGCTTGAGAAAGATAAAAATTGTGAAGAACTTCTCGAGGGTCTGCTGCAAAATGGTAGGCTTTCAATGGAACAATTGGTTGAAAGAGCCAAGTCAAGTAAACATGCAGGAAACCGTCCAATTCCAGATGTTGTACACGAAAGTTTATTTAAACTTTTGACTGCCCATTTTGTCGAACGCTGTCCAGCCCCTGAACCAATTCTTTCAGCCCAAGTTGAAGAACAGCCTCCTCCGAAAAAAAGAGGTGCTAAGGCTGCCAAGATATCTGAGGTACCAGAGACCTTAGAACAGCGTCTTGTAGGAGTAGCACGTCCAATGGAAGTTCTAAGATTTTCAATGAGTGAAACCAACACTGAAGCTGAAAAGAGTGAACTACCCATTTCTGGACAGAAGCGCAAGCACGATGAGTTGGAGGCGGTACAAGAGTCTGGAGATGCTGATGGTATTATTCTTTGGCGTGCCAACTTTGATGAATTTATAAGATGTCTTAGGCATAAGGCTTGCATTGAACATGTCAGATCGCAGTTTGATGATGGAGTAGTAAATGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAACTGTGAAAACAGAGATAACAGTTCCTTTATCGTTGGATAACATATATGAGGAGGTTATGAAGAATGAAGTAGGACGTAGTATGACCTTAGATCGAGTTGAAGCTTCCCTCTCTGCATTGGGTTGTCCAGGGATGGATGATTATAAAATTAATTTAAGGAAGATTATTGAACAAGCTCAAATTGAGGAGGTTGAATCAATTGTTTTAAAAAGATATGGAAGAGATGCTTACAGAATGTTCAGATTCCTATCGAGAACTGGTGGCTTGGTTGAGACAGAAAAGATTTCTGATAGTTCATTTGTTGATAAGAATGAAGCGCCTAAGATTCTATATAGGTTGTGGAAGGACGAGTACCTATACATGGAGAAAGTAGCTCTAACAGGACCTAGACATTCCCTATGCTTGTTGTGGAGAGTAGACAAATACAATTTGTGGGAACATGTTCTCGATGAGATGTACCATGCTTCATTGAACTTGCAGCTACGACAGGCTTATGAGATGGAACAAGACAAAGAGCTTCTGAGTCTTCCACCAGATAAGCGTGGCGGGCCACTCGAGAAAAGATATAATCGTCTGAGGAATGTCAGGATACTCCTGGAGTCGTCGTTGCTGAAGCTGGACGATGCACTAATGCTTTTCCATGACTTCTAA

Coding sequence (CDS)

ATGGGGACGACTCAGAATGGCATCAAATACGCCGTCCACATTATCACTGCGCACTTCGGCAATCTCGTCGCGAAAGTGTGCGAAACGCTGCTCCGAAAGGGGCCTCTGACGCTGAGACTTCTCATACGATTCACGGAACTCAACTCCTCACAAGTTAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTGCAAGCGTTCACTTCAGTGACCGAAGGTGAGTTTGGAGACGCGCCGAAGACTGACACGCAATACTTGGCGTTGTTTAGTAACATACTTCATCGCATGAGATTTTCCAAATTCCTGGCAGTTGCTTCGGAAAAGCTTGAGAAAGATAAAAATTGTGAAGAACTTCTCGAGGGTCTGCTGCAAAATGGTAGGCTTTCAATGGAACAATTGGTTGAAAGAGCCAAGTCAAGTAAACATGCAGGAAACCGTCCAATTCCAGATGTTGTACACGAAAGTTTATTTAAACTTTTGACTGCCCATTTTGTCGAACGCTGTCCAGCCCCTGAACCAATTCTTTCAGCCCAAGTTGAAGAACAGCCTCCTCCGAAAAAAAGAGGTGCTAAGGCTGCCAAGATATCTGAGGTACCAGAGACCTTAGAACAGCGTCTTGTAGGAGTAGCACGTCCAATGGAAGTTCTAAGATTTTCAATGAGTGAAACCAACACTGAAGCTGAAAAGAGTGAACTACCCATTTCTGGACAGAAGCGCAAGCACGATGAGTTGGAGGCGGTACAAGAGTCTGGAGATGCTGATGGTATTATTCTTTGGCGTGCCAACTTTGATGAATTTATAAGATGTCTTAGGCATAAGGCTTGCATTGAACATGTCAGATCGCAGTTTGATGATGGAGTAGTAAATGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAACTGTGAAAACAGAGATAACAGTTCCTTTATCGTTGGATAACATATATGAGGAGGTTATGAAGAATGAAGTAGGACGTAGTATGACCTTAGATCGAGTTGAAGCTTCCCTCTCTGCATTGGGTTGTCCAGGGATGGATGATTATAAAATTAATTTAAGGAAGATTATTGAACAAGCTCAAATTGAGGAGGTTGAATCAATTGTTTTAAAAAGATATGGAAGAGATGCTTACAGAATGTTCAGATTCCTATCGAGAACTGGTGGCTTGGTTGAGACAGAAAAGATTTCTGATAGTTCATTTGTTGATAAGAATGAAGCGCCTAAGATTCTATATAGGTTGTGGAAGGACGAGTACCTATACATGGAGAAAGTAGCTCTAACAGGACCTAGACATTCCCTATGCTTGTTGTGGAGAGTAGACAAATACAATTTGTGGGAACATGTTCTCGATGAGATGTACCATGCTTCATTGAACTTGCAGCTACGACAGGCTTATGAGATGGAACAAGACAAAGAGCTTCTGAGTCTTCCACCAGATAAGCGTGGCGGGCCACTCGAGAAAAGATATAATCGTCTGAGGAATGTCAGGATACTCCTGGAGTCGTCGTTGCTGAAGCTGGACGATGCACTAATGCTTTTCCATGACTTCTAA

Protein sequence

MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILIQHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELLEGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQVEEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKRKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF

Homology

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BLAST of Moc10g01470 vs. NCBI nr
Match: XP_022141200.1 (uncharacterized protein LOC111011656 isoform X1 [Momordica charantia])

HSP 1 Score: 1021.1 bits (2639), Expect = 3.2e-294
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI
Sbjct: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL
Sbjct: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV
Sbjct: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR 240
           EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR
Sbjct: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR 240

Query: 241 KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 300
           KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR
Sbjct: 241 KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 300

Query: 301 SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII 360
           SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII
Sbjct: 301 SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII 360

Query: 361 EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKD 420
           EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKD
Sbjct: 361 EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKD 420

Query: 421 EYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL 480
           EYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL
Sbjct: 421 EYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL 480

Query: 481 PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 520

[Close]

BLAST of Moc10g01470 vs. NCBI nr
Match: XP_022141201.1 (uncharacterized protein LOC111011656 isoform X2 [Momordica charantia])

HSP 1 Score: 948.3 bits (2450), Expect = 2.7e-272
Identity = 492/520 (94.62%), Postives = 492/520 (94.62%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI
Sbjct: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL
Sbjct: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV
Sbjct: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR 240
           EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR
Sbjct: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR 240

Query: 241 KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 300
           KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR
Sbjct: 241 KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 300

Query: 301 SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII 360
           SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII
Sbjct: 301 SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII 360

Query: 361 EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKD 420
           EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEK                      
Sbjct: 361 EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEK---------------------- 420

Query: 421 EYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL 480
                 KVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL
Sbjct: 421 ------KVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL 480

Query: 481 PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 492

[Close]

BLAST of Moc10g01470 vs. NCBI nr
Match: KAG6574180.1 (DNA-directed RNA polymerase III subunit RPC3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013236.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 937.9 bits (2423), Expect = 3.6e-269
Identity = 473/522 (90.61%), Postives = 500/522 (95.79%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           M +TQ GIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFT+VTEGEFGDAPK DTQYLALFSNILHRMRFSKFLA+ASEKLEKDK+CEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQ++ERAKSSKHAGNRPIPDVV+ESL KLL AHFVERCPAPEP LS QV
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAGNRPIPDVVNESLLKLLNAHFVERCPAPEPTLSPQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSE--LPISGQ 240
           EEQPPP+KRGAKAAK+SEVP TLEQRLV  ARPMEV+RFS+ ETNTEAE+SE    ISGQ
Sbjct: 181 EEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPMEVIRFSIGETNTEAEESEHYSSISGQ 240

Query: 241 KRKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRK  +L+ +QESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDG VNVLSAILEA
Sbjct: 241 KRKRGDLDTIQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGAVNVLSAILEA 300

Query: 301 TRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRK 360
           TRSSEK VKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+K
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMEDYKINLQK 360

Query: 361 IIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLW 420
           IIEQAQI+EVESIVLKRYGRDAYRMFRFLS+TGGLVETEKISDS+FVDKNEAPKILYRLW
Sbjct: 361 IIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLW 420

Query: 421 KDEYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480
           KDEYLYMEKVA+T PRHSLCLLWRVD+YNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
Sbjct: 421 KDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480

Query: 481 SLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           +LPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 NLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 522

[Close]

BLAST of Moc10g01470 vs. NCBI nr
Match: XP_022945853.1 (DNA-directed RNA polymerase III subunit RPC3 [Cucurbita moschata])

HSP 1 Score: 937.2 bits (2421), Expect = 6.2e-269
Identity = 472/522 (90.42%), Postives = 500/522 (95.79%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           M +TQ GIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFT+VTEGEFGDAPK DTQYLALFSNILHRMRFSKFLA+ASEKLEKDK+CEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQ++ERAKSSKHAGNRPIPDVV+ESL KLL AHFVERCPAPEP LS QV
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAGNRPIPDVVNESLLKLLNAHFVERCPAPEPTLSPQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSE--LPISGQ 240
           EEQPPP+KRGAKAAK+SEVP TLEQRLV  ARPMEV+RFS+ ETNTEAE+SE    ISGQ
Sbjct: 181 EEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPMEVIRFSIGETNTEAEESEHYSSISGQ 240

Query: 241 KRKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRK  +L+ +QESGDADGIILWRANFDEF+RCLRHKACIEHVRSQFDDG VNVLSAILEA
Sbjct: 241 KRKRGDLDMIQESGDADGIILWRANFDEFVRCLRHKACIEHVRSQFDDGAVNVLSAILEA 300

Query: 301 TRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRK 360
           TRSSEK VKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+K
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMEDYKINLQK 360

Query: 361 IIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLW 420
           IIEQAQI+EVESIVLKRYGRDAYRMFRFLS+TGGLVETEKISDS+FVDKNEAPKILYRLW
Sbjct: 361 IIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLW 420

Query: 421 KDEYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480
           KDEYLYMEKVA+T PRHSLCLLWRVD+YNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
Sbjct: 421 KDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480

Query: 481 SLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           +LPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 NLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 522

[Close]

BLAST of Moc10g01470 vs. NCBI nr
Match: XP_023541704.1 (DNA-directed RNA polymerase III subunit RPC3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 934.9 bits (2415), Expect = 3.1e-268
Identity = 472/522 (90.42%), Postives = 499/522 (95.59%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           M +TQ GIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFT+VTEGEFGDAPK DTQYLALFSNILHRMRFSKFLA+ASEKLEKDK+CEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQ++ERAKSSKHAGNRP PDVV+ESL KLL AHFVERCPAPEP LS QV
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAGNRPSPDVVNESLLKLLNAHFVERCPAPEPTLSPQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSE--LPISGQ 240
           EEQPPP+KRGAKAAK+SEVP TLEQRLV  ARPMEV+RFS+ ETNTEAE+SE    ISGQ
Sbjct: 181 EEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPMEVIRFSIGETNTEAEESEHYSSISGQ 240

Query: 241 KRKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRK  +L+ +QESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDG VNVLSAILEA
Sbjct: 241 KRKRGDLDMIQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGAVNVLSAILEA 300

Query: 301 TRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRK 360
           TRSSEK VKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+K
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMEDYKINLQK 360

Query: 361 IIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLW 420
           IIEQAQI+EVESIVLKRYGRDAYRMFRFLS+TGGLVETEKISDS+FVDKNEAPKILYRLW
Sbjct: 361 IIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLW 420

Query: 421 KDEYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480
           KDEYLYMEKVA+T PRHSLCLLWRVD+YNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
Sbjct: 421 KDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480

Query: 481 SLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           +LPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 NLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 522

[Close]

BLAST of Moc10g01470 vs. ExPASy Swiss-Prot
Match: Q2TBL4 (DNA-directed RNA polymerase III subunit RPC3 OS=Bos taurus OX=9913 GN=POLR3C PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-26
Identity = 128/492 (26.02%), Postives = 221/492 (44.92%), Query Frame = 0


Query: 4   TQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILIQHN 63
           TQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +LIQHN
Sbjct: 2   TQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHN 61

Query: 64  CVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELLEGL 123
            V          +    +   +Y A  + +L  +R+ +++  A + L  D   E ++E L
Sbjct: 62  LV---------TYQVHKRGVVEYEAQCNRVLRMLRYPRYIYTA-KTLYSDTG-ELIVEEL 121

Query: 124 LQNGRLSMEQLV----ERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQ 183
           L NG+++M  +V    +R   +   G       V  +  +L+  HFV+RCP   P     
Sbjct: 122 LLNGKMTMSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLVDTHFVQRCPL-VPATENS 181

Query: 184 VEEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQK 243
               PPP    A    +SE    L  +L  + +     R S  E  T   K++ P    K
Sbjct: 182 DTGPPPP----APTLVVSEKDMYLVPKLSLIGKGKR--RRSSDEDATGEPKAKRP----K 241

Query: 244 RKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT 303
           +  D  E + + G     I W+AN D F +  R +A +  V ++ D     ++  +L   
Sbjct: 242 QTTDNKEPIPDDG-----IYWQANLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTML--- 301

Query: 304 RSSEKTVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGM 363
           R SE T  +    T PLS + I+        + K  + + +TL  D     +   G  G 
Sbjct: 302 RMSEVTTPSGAPFTQPLSSNEIFRSLPVGYNISKQVLDQYLTLLADDPLEFVGKSGDSGG 361

Query: 364 DDYKINLRKIIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNE 423
             Y INL K +       +ES+V +R+G    R+FR + +   L E +++ D + +   E
Sbjct: 362 GMYVINLHKALGSLATATLESVVQERFGSRCARIFRLVLQKKHL-EQKQVEDFAMIPAKE 421

Query: 424 APKILYRLWKDEYLYMEKVALTGPRHS---LCLLWRVDKYNLWEHVLDEMYHASLNLQLR 479
           A  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R
Sbjct: 422 AKDMLYKMLSENFISLQEIPKT-PDHAPSRTFYLYTVNILSAARMLLHRCYKSVANLIER 461

[Close]

BLAST of Moc10g01470 vs. ExPASy Swiss-Prot
Match: Q9BUI4 (DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens OX=9606 GN=POLR3C PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.4e-26
Identity = 126/492 (25.61%), Postives = 219/492 (44.51%), Query Frame = 0


Query: 4   TQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILIQHN 63
           TQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +L+QHN
Sbjct: 2   TQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHN 61

Query: 64  CVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELLEGL 123
            V          +    +   +Y A  S +L  +R+ +++   ++ L  D   E ++E L
Sbjct: 62  LV---------SYQVHKRGVVEYEAQCSRVLRMLRYPRYI-YTTKTLYSDTG-ELIVEEL 121

Query: 124 LQNGRLSMEQLV----ERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQ 183
           L NG+L+M  +V    +R   +   G       V  +  +L   HFV+RCP+  P     
Sbjct: 122 LLNGKLTMSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPS-VPTTENS 181

Query: 184 VEEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQK 243
               PPP    A    I+E    L  +L  + +     R S  E      K++ P    K
Sbjct: 182 DPGPPPP----APTLVINEKDMYLVPKLSLIGKGKR--RRSSDEDAAGEPKAKRP----K 241

Query: 244 RKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT 303
              D  E + + G     I W+AN D F +  R +A +  V ++ D     ++  +L   
Sbjct: 242 YTTDNKEPIPDDG-----IYWQANLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTML--- 301

Query: 304 RSSEKTVKTE--ITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGM 363
           R SE T  +    T PLS + I+        + K  + + +TL  D     +   G  G 
Sbjct: 302 RMSEITTSSSAPFTQPLSSNEIFRSLPVGYNISKQVLDQYLTLLADDPLEFVGKSGDSGG 361

Query: 364 DDYKINLRKIIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNE 423
             Y INL K +       +ES+V +R+G    R+FR + +    +E +++ D + +   E
Sbjct: 362 GMYVINLHKALASLATATLESVVQERFGSRCARIFRLVLQKKH-IEQKQVEDFAMIPAKE 421

Query: 424 APKILYRLWKDEYLYMEKVALTGPRHS---LCLLWRVDKYNLWEHVLDEMYHASLNLQLR 479
           A  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R
Sbjct: 422 AKDMLYKMLSENFMSLQEIPKT-PDHAPSRTFYLYTVNILSAARMLLHRCYKSIANLIER 461

[Close]

BLAST of Moc10g01470 vs. ExPASy Swiss-Prot
Match: Q9D483 (DNA-directed RNA polymerase III subunit RPC3 OS=Mus musculus OX=10090 GN=Polr3c PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-24
Identity = 124/492 (25.20%), Postives = 218/492 (44.31%), Query Frame = 0


Query: 4   TQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILIQHN 63
           TQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN
Sbjct: 2   TQAEIKLCSLLLQEHFGEIVEKIGVHLVRTGSQPLRVIAHDTKASLDQVKKALCVLIHHN 61

Query: 64  CVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELLEGL 123
            V          +    +   +Y A  S +L  +R+ +++   ++ L  D   E ++E L
Sbjct: 62  LVL---------YHVHKRGVVEYEAQCSRVLRMLRYPRYI-YTTKTLYGDTG-ELIVEEL 121

Query: 124 LQNGRLSMEQLV----ERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQ 183
           L NG+++M  +V    +R   +   G       V  +  +L   HFV+RCP   P   + 
Sbjct: 122 LLNGKMTMSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPL-VPDTDSS 181

Query: 184 VEEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQK 243
               PPP    A    I+E    L  +L  + +     R S  E  T   K++ P     
Sbjct: 182 DRGPPPP----APTLVINEKDMYLVPKLSLIGKGKR--RRSSDEDATGEPKAKKP----- 241

Query: 244 RKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT 303
           R  D  E   + G     I W+ N D F +  R +A +  V ++ D     ++  +L   
Sbjct: 242 RYTDNKEPSPDDG-----IYWQVNLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTML--- 301

Query: 304 RSSEKTVKTE--ITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGM 363
           R SE T  +    T PLS + I+        + K  + + +TL  D     +   G  G 
Sbjct: 302 RMSEITTPSSAPYTQPLSSNEIFRSLPVGYNISKQVLDQYLTLLADDPLEFIGKSGDSGG 361

Query: 364 DDYKINLRKIIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNE 423
             + INL K +       +ES++ +R+G    R+FR + +   L E +++ D + +   E
Sbjct: 362 GMFVINLHKALASLATATLESVIQERFGSRCARIFRLVLQKKHL-EQKQVEDFAMIPAKE 421

Query: 424 APKILYRLWKDEYLYMEKVALTGPRHS---LCLLWRVDKYNLWEHVLDEMYHASLNLQLR 479
           A  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R
Sbjct: 422 AKDMLYKMLSENFILLQEIPKT-PDHAPSRTFYLYTVNVLSAARMLLHRCYKSIANLIER 460

[Close]

BLAST of Moc10g01470 vs. ExPASy Swiss-Prot
Match: Q5XIL3 (DNA-directed RNA polymerase III subunit RPC3 OS=Rattus norvegicus OX=10116 GN=Polr3c PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 5.1e-24
Identity = 121/492 (24.59%), Postives = 216/492 (43.90%), Query Frame = 0


Query: 4   TQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILIQHN 63
           TQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN
Sbjct: 2   TQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTKASLDQVKKALCVLIHHN 61

Query: 64  CVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELLEGL 123
            V          +    +   +Y A  S +L  +R+ +++   ++ L  D   E ++E L
Sbjct: 62  LV---------IYHVHKRGVVEYEAQCSRVLRMLRYPRYI-YTTKTLYGDTG-ELIVEEL 121

Query: 124 LQNGRLSMEQLV----ERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQ 183
           L NG+++M  +V    +R   +   G       V  +  +L   HFV+RCP      S+ 
Sbjct: 122 LLNGKMTMSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPLVPDTDSSD 181

Query: 184 VEEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQK 243
               PP          +  VP+     L+G  +     R   S+ +   E    P + + 
Sbjct: 182 PGPPPPAPNLVINEKDMYLVPKL---SLIGKGK-----RRRSSDEDAAGE----PKAKKP 241

Query: 244 RKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT 303
           R  D  E   + G     I W+ N D F +  R +A +  V ++ D     ++  +L   
Sbjct: 242 RCTDNEEPTPDDG-----IYWQVNLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTML--- 301

Query: 304 RSSEKTVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGM 363
           R SE T  +    T PLS + I+        + K  + + +TL  D     +   G  G 
Sbjct: 302 RMSEITTPSGAPFTQPLSSNEIFRSLPVGYNISKQVLDQYLTLLADDPLEFIGKAGDSGG 361

Query: 364 DDYKINLRKIIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNE 423
             Y INL K +       +ES++ +R+G    R+FR + +   L E +++ D + +   E
Sbjct: 362 GMYVINLHKALASLSTATLESVIQERFGSRCARIFRLVLQKKHL-EQKQVEDFAMIPAKE 421

Query: 424 APKILYRLWKDEYLYMEKVALTGPRHS---LCLLWRVDKYNLWEHVLDEMYHASLNLQLR 479
           A  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R
Sbjct: 422 AKDMLYKMLSENFISLQEIPKT-PDHAPSRTFYLYTVNVLSAARMLLHRCYKSIANLIER 460

[Close]

BLAST of Moc10g01470 vs. ExPASy Swiss-Prot
Match: Q55FJ5 (DNA-directed RNA polymerase III subunit rpc3 OS=Dictyostelium discoideum OX=44689 GN=polr3c PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-15
Identity = 134/665 (20.15%), Postives = 260/665 (39.10%), Query Frame = 0


Query: 9   KYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LNSSQVNNSLLILIQHNC 68
           K A+ I+   FG+ V KV E L+++G  + +++ +       L   ++   LL+LIQHN 
Sbjct: 5   KVAIDIVKESFGDDVTKVFEFLVQRGKSSYKIINQSLSGKGGLTIKRIKQCLLVLIQHNL 64

Query: 69  V---QAFTSVTEGEF-----GDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNC 128
           V   +    +T+ E      G+   +D+ Y A+  N +HR+RF KF+     K  K    
Sbjct: 65  VTYEEFLLPLTKDEIEKLVPGEPLPSDSVYEAIIVNAIHRLRFPKFINYI--KHSKGDEA 124

Query: 129 EELLEGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVV----HESLFKLLTAHFVERCPAP 188
             +LE L+ +GRL M+ L+++A   +        D +     ++  KL+   F+ R P P
Sbjct: 125 AYILEELIDHGRLPMDLLIKQASQIQRVDTFEDQDDITKRFEDTFTKLIMDQFIMRAPRP 184

Query: 189 EPILSAQVEE--QPPPKKRGAKAAKISEV----------------------PETLEQRLV 248
            P+   +         KK G   A  + V                      P +      
Sbjct: 185 RPVSDQETSNALSKEAKKVGGGGANGNNVGAHQKKDSDPFALPSVGFSSNGPLSSVDNSA 244

Query: 249 GVARPMEVLRFSMSET------------NTEAEKSELPIS-------GQKRK----HDE- 308
             A  +E+L    S T             T A+     I+       G+KRK    +DE 
Sbjct: 245 NDAESLEILTGKSSTTTIPSQPKKGTAKKTSAKPKSTAINTTATASLGRKRKSRDIYDED 304

Query: 309 ------LEAVQESGDA-------------------------------------------- 368
                 L  ++E+ +                                             
Sbjct: 305 DDEEPDLLVIEENVEINVNDHNSANKNSTTTTTTTTTKTGQHTLKKSKLDQSSSTTTTSS 364

Query: 369 --------------DGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 428
                         +  +LW  N+++FI   + KAC + V  + +     + +A+++  +
Sbjct: 365 RQQQNGMDQQRIIDESRVLWTINYEQFIIEFKLKACYDFVTEKNNQQSGLLFNAMVKLCK 424

Query: 429 SSEKTVKTEITVPLSLDNIYEEVMKN-EVGRSMTLDRVEASLSALGC--PGM-------- 488
            S ++ +  +T  +  +NI EE  ++ +  + M   ++E  LS +    P M        
Sbjct: 425 RSIRSNQDSLTSCVYGENILEEYNRDLDSSKKMDKLQIEKYLSIMQASRPSMVTKMVSKS 484

Query: 489 --------DDYKINLRKIIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISD 521
                     Y++N+  II   + + VESI+ +++G +  R+F+ L     L+E ++I++
Sbjct: 485 KQSSSSELGAYQVNVGNIIGIIKQKMVESIIKQKFGDNGLRVFKLL-LIKNLLEPKQIAE 544

[Close]

BLAST of Moc10g01470 vs. ExPASy TrEMBL
Match: A0A6J1CHB3 (DNA-directed RNA polymerase III subunit RPC3 OS=Momordica charantia OX=3673 GN=LOC111011656 PE=3 SV=1)

HSP 1 Score: 1021.1 bits (2639), Expect = 1.6e-294
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI
Sbjct: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL
Sbjct: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV
Sbjct: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR 240
           EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR
Sbjct: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR 240

Query: 241 KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 300
           KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR
Sbjct: 241 KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 300

Query: 301 SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII 360
           SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII
Sbjct: 301 SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII 360

Query: 361 EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKD 420
           EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKD
Sbjct: 361 EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKD 420

Query: 421 EYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL 480
           EYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL
Sbjct: 421 EYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL 480

Query: 481 PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 520

[Close]

BLAST of Moc10g01470 vs. ExPASy TrEMBL
Match: A0A6J1CIE4 (DNA-directed RNA polymerase III subunit RPC3 OS=Momordica charantia OX=3673 GN=LOC111011656 PE=3 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 1.3e-272
Identity = 492/520 (94.62%), Postives = 492/520 (94.62%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI
Sbjct: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL
Sbjct: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV
Sbjct: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR 240
           EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR
Sbjct: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSELPISGQKR 240

Query: 241 KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 300
           KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR
Sbjct: 241 KHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATR 300

Query: 301 SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII 360
           SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII
Sbjct: 301 SSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKII 360

Query: 361 EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLWKD 420
           EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEK                      
Sbjct: 361 EQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEK---------------------- 420

Query: 421 EYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL 480
                 KVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL
Sbjct: 421 ------KVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLSL 480

Query: 481 PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 PPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 492

[Close]

BLAST of Moc10g01470 vs. ExPASy TrEMBL
Match: A0A6J1G256 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita moschata OX=3662 GN=LOC111449973 PE=3 SV=1)

HSP 1 Score: 937.2 bits (2421), Expect = 3.0e-269
Identity = 472/522 (90.42%), Postives = 500/522 (95.79%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           M +TQ GIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFT+VTEGEFGDAPK DTQYLALFSNILHRMRFSKFLA+ASEKLEKDK+CEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQ++ERAKSSKHAGNRPIPDVV+ESL KLL AHFVERCPAPEP LS QV
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAGNRPIPDVVNESLLKLLNAHFVERCPAPEPTLSPQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSE--LPISGQ 240
           EEQPPP+KRGAKAAK+SEVP TLEQRLV  ARPMEV+RFS+ ETNTEAE+SE    ISGQ
Sbjct: 181 EEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPMEVIRFSIGETNTEAEESEHYSSISGQ 240

Query: 241 KRKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRK  +L+ +QESGDADGIILWRANFDEF+RCLRHKACIEHVRSQFDDG VNVLSAILEA
Sbjct: 241 KRKRGDLDMIQESGDADGIILWRANFDEFVRCLRHKACIEHVRSQFDDGAVNVLSAILEA 300

Query: 301 TRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRK 360
           TRSSEK VKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+K
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMEDYKINLQK 360

Query: 361 IIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLW 420
           IIEQAQI+EVESIVLKRYGRDAYRMFRFLS+TGGLVETEKISDS+FVDKNEAPKILYRLW
Sbjct: 361 IIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLW 420

Query: 421 KDEYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480
           KDEYLYMEKVA+T PRHSLCLLWRVD+YNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
Sbjct: 421 KDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480

Query: 481 SLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           +LPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 NLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 522

[Close]

BLAST of Moc10g01470 vs. ExPASy TrEMBL
Match: A0A6J1HUV1 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita maxima OX=3661 GN=LOC111467684 PE=3 SV=1)

HSP 1 Score: 934.1 bits (2413), Expect = 2.5e-268
Identity = 472/522 (90.42%), Postives = 500/522 (95.79%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           M +TQ GIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLLIRFTEL+SSQ+NNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLIRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFT+VTEGEFGDAPK DTQYLALFSNILHRMRFSKFLA+ASEKLEKDK+CEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQ++ERAKSSKHAGNRPIPDVV+ESL KLL AHFVERCPAPEP LS QV
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAGNRPIPDVVNESLLKLLNAHFVERCPAPEPTLSPQV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSE--LPISGQ 240
           EEQPPP+KRGAKAAK+SEVP TLEQRLV  ARPMEV+RFS+ ETNTEAE+SE    ISGQ
Sbjct: 181 EEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPMEVIRFSIGETNTEAEESEHYSSISGQ 240

Query: 241 KRKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRK  +L+ +QESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDG VNVLSAILEA
Sbjct: 241 KRKRGDLDMIQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGAVNVLSAILEA 300

Query: 301 TRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRK 360
           TRSSEK VKTEITVPLSL+NIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+K
Sbjct: 301 TRSSEKIVKTEITVPLSLENIYEEVMKNEVGRSMTLDRVEASLSALGCSGMEDYKINLQK 360

Query: 361 IIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLW 420
           IIEQAQI+EVESIVLKRYGRDAYRMFRFLS+TGGLVETEKISDS+FVDKNEAPKILYRLW
Sbjct: 361 IIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLW 420

Query: 421 KDEYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480
           KDEYLYMEKVA+T PR+SLCLLWRVD+YNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL
Sbjct: 421 KDEYLYMEKVAITVPRYSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480

Query: 481 SLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           +LPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Sbjct: 481 NLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 522

[Close]

BLAST of Moc10g01470 vs. ExPASy TrEMBL
Match: A0A1S3AYY3 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo OX=3656 GN=LOC103484083 PE=3 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 5.1e-253
Identity = 448/522 (85.82%), Postives = 478/522 (91.57%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60
           M  TQ GIKYAVHI+TAHFGNLVAKVCETLLRKGPLTLRLLIRFTEL  SQVNNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120
           QHNCVQAFT VTEGEFGDAPK DTQYLALFSNILHRMRFSKFLA+AS+KL +DKNC+ELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSAQV 180
           EGLLQNGRLSMEQ+VERA+SS  AGNRPIPDVVH+SLFKLL AHFVERCPAPEP LS +V
Sbjct: 121 EGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180

Query: 181 EEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSMSETNTEAEKSE--LPISGQ 240
           EEQPPP+KRGAKAAKI EVPETLEQRL+  ARP+EVLRFSM +TN EAEKSE    ISGQ
Sbjct: 181 EEQPPPRKRGAKAAKIFEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQ 240

Query: 241 KRKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRKHDELE  Q+SG ADG ILWRAN+DEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Sbjct: 241 KRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA 300

Query: 301 TRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRK 360
           TRSSEK VKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGCPGMDDYKINLR+
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRR 360

Query: 361 IIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFVDKNEAPKILYRLW 420
           I+EQAQ +EVESIVLKRYGRDAYRMFRFLS+TGGLVETEKISDSSFVDKNEAPKILYRLW
Sbjct: 361 IVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLW 420

Query: 421 KDEYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 480
           KDEYLYMEKVA+T PRHSLCLLWRVD+YNLWEHVLDEMYHASLNLQLR A+E+E++KELL
Sbjct: 421 KDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL 480

Query: 481 SLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           SLP D    PL K+ +    VR LL SSL+KLDDALMLFHDF
Sbjct: 481 SLPKDNNNKPLVKKMHHFEKVRNLLRSSLVKLDDALMLFHDF 522

[Close]

BLAST of Moc10g01470 vs. TAIR 10
Match: AT3G49000.1 (RNA polymerase III subunit RPC82 family protein )

HSP 1 Score: 455.3 bits (1170), Expect = 6.6e-128
Identity = 247/536 (46.08%), Postives = 362/536 (67.54%), Query Frame = 0


Query: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LNSSQVNNSLLI 60
           M  ++ GI YA+HIIT  FG++V+KVCE LLRKGPL+ R + R  E  +N ++V + L +
Sbjct: 1   MSMSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYL 60

Query: 61  LIQHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEE 120
           LIQHNCVQAF+   E   G   K   QY+ LF+NILHR+R++KF  + +E+L  D  C  
Sbjct: 61  LIQHNCVQAFS--IEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEEL--DSKCGA 120

Query: 121 LLEGLLQNGRLSMEQLVERAKSSKHAGNRPIPDVVHESLFKLLTAHFVERCPAPEPILSA 180
           +L+GLL NGRL++ Q +ER + S   GN    + + +SL KL+ A FVER P+PEP+L  
Sbjct: 121 VLDGLLSNGRLTLGQFIERDRDS---GNTIGSEAIRDSLQKLVAARFVERIPSPEPVLGN 180

Query: 181 QVEEQPPPKKRGAKAAKISEVPETLEQRLVGVARPMEVLRFSM---SETNTEAEKSELPI 240
             +E+ P K+RGAKAAKI + PETLE+++V  A P++ +RF +    ++N+        I
Sbjct: 181 --KEKEPAKRRGAKAAKILKEPETLEEQVVEAATPVDAIRFPLIFEEDSNSSLADDNSNI 240

Query: 241 SGQKRKHDELEAVQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAI 300
           +  KRK  ++    ++ D+   ++WR NF+EFI  LRHKAC+E V+ + D+G   VL A+
Sbjct: 241 TEGKRKQRDV----DTSDSSSGVIWRPNFEEFIHRLRHKACVEIVKERRDEGCAIVLRAM 300

Query: 301 LEATRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGM------ 360
           LE  RS EK VKT+ + P+S+ +IYEEV+K E GR+M  +RVEA L  L           
Sbjct: 301 LEVGRSQEKKVKTDNSAPMSVGSIYEEVIKTEAGRTMLQERVEACLDQLSATSSYLPAFV 360

Query: 361 ----DDYKINLRKIIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGLVETEKISDSSFV 420
               D Y ++ + II  AQ +E+E++V++RYG++A+RMFR+LS+ G  VET+KI+D++  
Sbjct: 361 NEVNDSYIVDYKSIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQEGRFVETDKIADAALT 420

Query: 421 DKNEAPKILYRLWKDEYLYMEKVALTGP-RHSLCLLWRVDKYNLWEHVLDEMYHASLNLQ 480
           +K + P+ L ++WKD YL+M+K+A+T P  ++  LLW+V+K  +   +LDEMYHASLNL 
Sbjct: 421 EKKDTPQFLLKMWKDGYLHMQKLAVTAPGMYTPFLLWKVNKLIVTTQMLDEMYHASLNLS 480

Query: 481 LRQAYEMEQDKELLSLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF 521
           LR A+E+E +KELL LP DK  GPL++R  +++  R+LL S++ KLDDA+MLFHDF
Sbjct: 481 LRLAHELEAEKELLLLPLDKLEGPLKERLKKVKAKRLLLSSTMFKLDDAIMLFHDF 523

The following BLAST results are available for this feature:

BLAST of Moc10g01470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141200.1	3.2e-294	100.00	uncharacterized protein LOC111011656 isoform X1 [Momordica charantia]	[more]
XP_022141201.1	2.7e-272	94.62	uncharacterized protein LOC111011656 isoform X2 [Momordica charantia]	[more]
KAG6574180.1	3.6e-269	90.61	DNA-directed RNA polymerase III subunit RPC3, partial [Cucurbita argyrosperma su...	[more]
XP_022945853.1	6.2e-269	90.42	DNA-directed RNA polymerase III subunit RPC3 [Cucurbita moschata]	[more]
XP_023541704.1	3.1e-268	90.42	DNA-directed RNA polymerase III subunit RPC3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc10g01470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2TBL4	1.1e-26	26.02	DNA-directed RNA polymerase III subunit RPC3 OS=Bos taurus OX=9913 GN=POLR3C PE=...	[more]
Q9BUI4	5.4e-26	25.61	DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens OX=9606 GN=POLR3C P...	[more]
Q9D483	3.0e-24	25.20	DNA-directed RNA polymerase III subunit RPC3 OS=Mus musculus OX=10090 GN=Polr3c ...	[more]
Q5XIL3	5.1e-24	24.59	DNA-directed RNA polymerase III subunit RPC3 OS=Rattus norvegicus OX=10116 GN=Po...	[more]
Q55FJ5	1.9e-15	20.15	DNA-directed RNA polymerase III subunit rpc3 OS=Dictyostelium discoideum OX=4468...	[more]

BLAST of Moc10g01470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHB3	1.6e-294	100.00	DNA-directed RNA polymerase III subunit RPC3 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1CIE4	1.3e-272	94.62	DNA-directed RNA polymerase III subunit RPC3 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1G256	3.0e-269	90.42	DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1HUV1	2.5e-268	90.42	DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3AYY3	5.1e-253	85.82	DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]

BLAST of Moc10g01470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49000.1	6.6e-128	46.08	RNA polymerase III subunit RPC82 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 358..444 e-value: 2.6E-20 score: 74.2
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 91..178 e-value: 5.3E-20 score: 73.2
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 3..76 e-value: 2.5E-22 score: 80.9
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 263..357 e-value: 4.7E-8 score: 35.7
IPR013197	RNA polymerase III subunit RPC82-related, helix-turn-helix	PFAM	PF08221	HTH_9	coord: 10..69 e-value: 3.1E-22 score: 78.4
IPR008806	RNA polymerase III Rpc82, C -terminal	PFAM	PF05645	RNA_pol_Rpc82	coord: 156..336 e-value: 2.3E-17 score: 63.6
IPR039748	DNA-directed RNA polymerase III subunit RPC3	PANTHER	PTHR12949	RNA POLYMERASE III DNA DIRECTED -RELATED	coord: 4..520

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g01470.1	Moc10g01470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding